Multiple sequence alignment - TraesCS5B01G089900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G089900 chr5B 100.000 2357 0 0 1 2357 115421417 115419061 0.000000e+00 4353.0
1 TraesCS5B01G089900 chr5B 92.115 279 21 1 497 775 477882682 477882405 2.200000e-105 392.0
2 TraesCS5B01G089900 chr5B 81.982 333 58 2 3 333 65068673 65069005 4.960000e-72 281.0
3 TraesCS5B01G089900 chr5B 81.567 217 31 7 128 341 697512244 697512454 1.120000e-38 171.0
4 TraesCS5B01G089900 chr5B 87.000 100 13 0 2127 2226 626338335 626338236 1.910000e-21 113.0
5 TraesCS5B01G089900 chr5B 87.000 100 13 0 2127 2226 631464757 631464658 1.910000e-21 113.0
6 TraesCS5B01G089900 chr5A 95.003 1601 53 15 773 2357 109968287 109966698 0.000000e+00 2488.0
7 TraesCS5B01G089900 chr5A 91.727 278 22 1 499 776 663369435 663369159 3.670000e-103 385.0
8 TraesCS5B01G089900 chr5A 86.000 100 14 0 2127 2226 631330500 631330401 8.910000e-20 108.0
9 TraesCS5B01G089900 chr5D 93.516 1604 45 14 773 2357 106518835 106520398 0.000000e+00 2331.0
10 TraesCS5B01G089900 chr5D 92.442 172 10 1 328 499 106518669 106518837 2.340000e-60 243.0
11 TraesCS5B01G089900 chr5D 86.000 100 14 0 2127 2226 502596582 502596483 8.910000e-20 108.0
12 TraesCS5B01G089900 chr5D 84.694 98 13 2 2127 2223 11949949 11950045 1.930000e-16 97.1
13 TraesCS5B01G089900 chr3A 93.141 277 18 1 499 775 165289523 165289248 2.820000e-109 405.0
14 TraesCS5B01G089900 chr6B 92.832 279 19 1 497 775 662616148 662616425 1.010000e-108 403.0
15 TraesCS5B01G089900 chr4A 92.727 275 19 1 499 773 84532955 84532682 1.700000e-106 396.0
16 TraesCS5B01G089900 chr3B 92.143 280 21 1 496 775 691347088 691346810 6.110000e-106 394.0
17 TraesCS5B01G089900 chr3B 86.269 335 41 5 1 333 9960176 9960507 2.230000e-95 359.0
18 TraesCS5B01G089900 chr3B 82.738 336 54 4 3 337 367669533 367669201 1.770000e-76 296.0
19 TraesCS5B01G089900 chr3B 88.793 232 25 1 989 1219 615471715 615471946 1.380000e-72 283.0
20 TraesCS5B01G089900 chr6A 92.364 275 20 1 499 773 586916227 586916500 7.900000e-105 390.0
21 TraesCS5B01G089900 chr6A 85.373 335 47 2 3 337 529599988 529600320 1.730000e-91 346.0
22 TraesCS5B01G089900 chr7B 92.000 275 21 1 499 773 677422951 677423224 3.670000e-103 385.0
23 TraesCS5B01G089900 chr1A 91.727 278 22 1 499 776 554825413 554825137 3.670000e-103 385.0
24 TraesCS5B01G089900 chr7D 83.432 338 53 3 3 339 174673325 174672990 6.330000e-81 311.0
25 TraesCS5B01G089900 chr7D 90.393 229 21 1 992 1219 86827818 86827590 1.370000e-77 300.0
26 TraesCS5B01G089900 chr7D 81.711 339 59 3 1 338 488611844 488611508 1.780000e-71 279.0
27 TraesCS5B01G089900 chr4D 83.235 340 53 4 1 339 455660321 455659985 2.280000e-80 309.0
28 TraesCS5B01G089900 chr4D 88.043 92 6 4 2128 2217 84545695 84545783 1.150000e-18 104.0
29 TraesCS5B01G089900 chr2D 89.956 229 22 1 992 1219 203135639 203135411 6.370000e-76 294.0
30 TraesCS5B01G089900 chr4B 88.362 232 26 1 989 1219 445051469 445051700 6.420000e-71 278.0
31 TraesCS5B01G089900 chr2B 85.238 210 15 9 1000 1209 77262415 77262608 3.970000e-48 202.0
32 TraesCS5B01G089900 chr2B 75.265 283 61 6 21 299 585937839 585937562 2.460000e-25 126.0
33 TraesCS5B01G089900 chr7A 82.511 223 21 8 989 1210 620861492 620861697 1.860000e-41 180.0
34 TraesCS5B01G089900 chr3D 84.848 99 11 4 2121 2216 48365631 48365728 1.930000e-16 97.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G089900 chr5B 115419061 115421417 2356 True 4353 4353 100.000 1 2357 1 chr5B.!!$R1 2356
1 TraesCS5B01G089900 chr5A 109966698 109968287 1589 True 2488 2488 95.003 773 2357 1 chr5A.!!$R1 1584
2 TraesCS5B01G089900 chr5D 106518669 106520398 1729 False 1287 2331 92.979 328 2357 2 chr5D.!!$F2 2029

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
302 303 0.105593 CGATATGCCTCACCACAGCT 59.894 55.0 0.0 0.0 0.0 4.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1868 1903 0.389948 GGAAGGCGTCGTCACAGAAT 60.39 55.0 5.11 0.0 0.0 2.4 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 1.871080 CGGCTGATCTTGGTATGGTC 58.129 55.000 0.00 0.00 0.00 4.02
20 21 1.541233 CGGCTGATCTTGGTATGGTCC 60.541 57.143 0.00 0.00 0.00 4.46
21 22 1.541233 GGCTGATCTTGGTATGGTCCG 60.541 57.143 0.00 0.00 0.00 4.79
22 23 1.541233 GCTGATCTTGGTATGGTCCGG 60.541 57.143 0.00 0.00 0.00 5.14
23 24 1.070758 CTGATCTTGGTATGGTCCGGG 59.929 57.143 0.00 0.00 0.00 5.73
24 25 1.129058 GATCTTGGTATGGTCCGGGT 58.871 55.000 0.00 0.00 0.00 5.28
25 26 0.837272 ATCTTGGTATGGTCCGGGTG 59.163 55.000 0.00 0.00 0.00 4.61
26 27 1.223487 CTTGGTATGGTCCGGGTGG 59.777 63.158 0.00 0.00 0.00 4.61
27 28 1.229561 TTGGTATGGTCCGGGTGGA 60.230 57.895 0.00 0.00 43.88 4.02
35 36 4.043100 TCCGGGTGGAGCTCGAGA 62.043 66.667 18.75 0.00 45.67 4.04
36 37 3.827898 CCGGGTGGAGCTCGAGAC 61.828 72.222 18.75 9.09 45.67 3.36
37 38 4.180946 CGGGTGGAGCTCGAGACG 62.181 72.222 18.75 7.59 45.67 4.18
38 39 3.827898 GGGTGGAGCTCGAGACGG 61.828 72.222 18.75 0.00 0.00 4.79
39 40 2.750637 GGTGGAGCTCGAGACGGA 60.751 66.667 18.75 0.00 0.00 4.69
40 41 2.486042 GTGGAGCTCGAGACGGAC 59.514 66.667 18.75 2.87 0.00 4.79
41 42 2.041686 GTGGAGCTCGAGACGGACT 61.042 63.158 18.75 2.34 0.00 3.85
42 43 1.745864 TGGAGCTCGAGACGGACTC 60.746 63.158 18.75 12.36 41.79 3.36
43 44 1.745864 GGAGCTCGAGACGGACTCA 60.746 63.158 18.75 0.00 45.14 3.41
44 45 1.426223 GAGCTCGAGACGGACTCAC 59.574 63.158 18.75 0.00 45.14 3.51
45 46 1.299562 GAGCTCGAGACGGACTCACA 61.300 60.000 18.75 0.00 45.14 3.58
46 47 0.889638 AGCTCGAGACGGACTCACAA 60.890 55.000 18.75 0.00 45.14 3.33
47 48 0.729816 GCTCGAGACGGACTCACAAC 60.730 60.000 18.75 0.00 45.14 3.32
48 49 0.875728 CTCGAGACGGACTCACAACT 59.124 55.000 6.58 0.00 45.14 3.16
49 50 2.074576 CTCGAGACGGACTCACAACTA 58.925 52.381 6.58 0.00 45.14 2.24
50 51 1.802960 TCGAGACGGACTCACAACTAC 59.197 52.381 8.14 0.00 45.14 2.73
51 52 1.805345 CGAGACGGACTCACAACTACT 59.195 52.381 8.14 0.00 45.14 2.57
52 53 2.412977 CGAGACGGACTCACAACTACTG 60.413 54.545 8.14 0.00 45.14 2.74
53 54 1.887198 AGACGGACTCACAACTACTGG 59.113 52.381 0.00 0.00 0.00 4.00
54 55 0.317479 ACGGACTCACAACTACTGGC 59.683 55.000 0.00 0.00 0.00 4.85
55 56 0.732880 CGGACTCACAACTACTGGCG 60.733 60.000 0.00 0.00 0.00 5.69
56 57 0.389948 GGACTCACAACTACTGGCGG 60.390 60.000 0.00 0.00 0.00 6.13
57 58 0.601558 GACTCACAACTACTGGCGGA 59.398 55.000 0.00 0.00 0.00 5.54
58 59 1.000506 GACTCACAACTACTGGCGGAA 59.999 52.381 0.00 0.00 0.00 4.30
59 60 1.000955 ACTCACAACTACTGGCGGAAG 59.999 52.381 0.00 0.00 0.00 3.46
71 72 4.386413 CGGAAGCCCTGGATATGC 57.614 61.111 0.00 0.00 0.00 3.14
72 73 1.669115 CGGAAGCCCTGGATATGCG 60.669 63.158 0.00 0.00 0.00 4.73
73 74 1.968540 GGAAGCCCTGGATATGCGC 60.969 63.158 0.00 0.00 0.00 6.09
74 75 1.227943 GAAGCCCTGGATATGCGCA 60.228 57.895 14.96 14.96 0.00 6.09
75 76 0.819259 GAAGCCCTGGATATGCGCAA 60.819 55.000 17.11 4.13 0.00 4.85
76 77 0.820891 AAGCCCTGGATATGCGCAAG 60.821 55.000 17.11 6.62 43.44 4.01
77 78 2.263741 GCCCTGGATATGCGCAAGG 61.264 63.158 17.11 16.80 38.28 3.61
78 79 1.149174 CCCTGGATATGCGCAAGGT 59.851 57.895 17.11 2.50 38.28 3.50
79 80 0.396435 CCCTGGATATGCGCAAGGTA 59.604 55.000 17.11 1.98 38.28 3.08
80 81 1.609061 CCCTGGATATGCGCAAGGTAG 60.609 57.143 17.11 9.59 38.28 3.18
81 82 1.344438 CCTGGATATGCGCAAGGTAGA 59.656 52.381 17.11 0.00 38.28 2.59
82 83 2.408050 CTGGATATGCGCAAGGTAGAC 58.592 52.381 17.11 1.69 38.28 2.59
83 84 2.036475 CTGGATATGCGCAAGGTAGACT 59.964 50.000 17.11 0.00 38.28 3.24
84 85 2.035961 TGGATATGCGCAAGGTAGACTC 59.964 50.000 17.11 2.30 38.28 3.36
85 86 2.297597 GGATATGCGCAAGGTAGACTCT 59.702 50.000 17.11 0.00 38.28 3.24
86 87 3.243907 GGATATGCGCAAGGTAGACTCTT 60.244 47.826 17.11 0.00 38.28 2.85
87 88 2.301577 ATGCGCAAGGTAGACTCTTC 57.698 50.000 17.11 0.00 38.28 2.87
88 89 0.109272 TGCGCAAGGTAGACTCTTCG 60.109 55.000 8.16 0.00 38.28 3.79
89 90 0.802607 GCGCAAGGTAGACTCTTCGG 60.803 60.000 0.30 0.00 38.28 4.30
90 91 0.802607 CGCAAGGTAGACTCTTCGGC 60.803 60.000 0.00 0.00 0.00 5.54
91 92 0.802607 GCAAGGTAGACTCTTCGGCG 60.803 60.000 0.00 0.00 0.00 6.46
92 93 0.526662 CAAGGTAGACTCTTCGGCGT 59.473 55.000 6.85 0.00 0.00 5.68
93 94 1.741706 CAAGGTAGACTCTTCGGCGTA 59.258 52.381 6.85 0.00 0.00 4.42
94 95 2.345124 AGGTAGACTCTTCGGCGTAT 57.655 50.000 6.85 0.00 0.00 3.06
95 96 1.948145 AGGTAGACTCTTCGGCGTATG 59.052 52.381 6.85 0.00 0.00 2.39
96 97 1.599916 GGTAGACTCTTCGGCGTATGC 60.600 57.143 6.85 0.00 41.71 3.14
97 98 0.306840 TAGACTCTTCGGCGTATGCG 59.693 55.000 6.85 0.00 44.10 4.73
98 99 1.944676 GACTCTTCGGCGTATGCGG 60.945 63.158 6.85 8.13 44.10 5.69
107 108 3.112075 CGTATGCGGCCGCCATAG 61.112 66.667 44.42 29.30 41.09 2.23
108 109 2.342279 GTATGCGGCCGCCATAGA 59.658 61.111 44.42 28.23 41.09 1.98
109 110 1.738099 GTATGCGGCCGCCATAGAG 60.738 63.158 44.42 6.66 41.09 2.43
110 111 2.942796 TATGCGGCCGCCATAGAGG 61.943 63.158 44.42 5.81 41.09 3.69
112 113 4.008933 GCGGCCGCCATAGAGGAT 62.009 66.667 39.89 0.00 41.22 3.24
113 114 2.646175 GCGGCCGCCATAGAGGATA 61.646 63.158 39.89 0.00 41.22 2.59
114 115 1.961180 GCGGCCGCCATAGAGGATAT 61.961 60.000 39.89 0.00 41.22 1.63
115 116 0.179100 CGGCCGCCATAGAGGATATG 60.179 60.000 14.67 0.00 41.22 1.78
116 117 1.195115 GGCCGCCATAGAGGATATGA 58.805 55.000 3.91 0.00 41.22 2.15
117 118 1.555075 GGCCGCCATAGAGGATATGAA 59.445 52.381 3.91 0.00 41.22 2.57
118 119 2.027192 GGCCGCCATAGAGGATATGAAA 60.027 50.000 3.91 0.00 41.22 2.69
119 120 3.370953 GGCCGCCATAGAGGATATGAAAT 60.371 47.826 3.91 0.00 41.22 2.17
120 121 4.141711 GGCCGCCATAGAGGATATGAAATA 60.142 45.833 3.91 0.00 41.22 1.40
121 122 5.455326 GGCCGCCATAGAGGATATGAAATAT 60.455 44.000 3.91 0.00 43.59 1.28
138 139 8.757982 ATGAAATATCAACTCAAGCTATGGTT 57.242 30.769 0.00 0.00 39.49 3.67
139 140 8.213518 TGAAATATCAACTCAAGCTATGGTTC 57.786 34.615 0.00 0.00 30.99 3.62
140 141 8.049117 TGAAATATCAACTCAAGCTATGGTTCT 58.951 33.333 0.00 0.00 30.99 3.01
141 142 8.443953 AAATATCAACTCAAGCTATGGTTCTC 57.556 34.615 0.00 0.00 0.00 2.87
142 143 5.690464 ATCAACTCAAGCTATGGTTCTCT 57.310 39.130 0.00 0.00 0.00 3.10
143 144 5.078411 TCAACTCAAGCTATGGTTCTCTC 57.922 43.478 0.00 0.00 0.00 3.20
144 145 4.528206 TCAACTCAAGCTATGGTTCTCTCA 59.472 41.667 0.00 0.00 0.00 3.27
145 146 5.012046 TCAACTCAAGCTATGGTTCTCTCAA 59.988 40.000 0.00 0.00 0.00 3.02
146 147 5.690464 ACTCAAGCTATGGTTCTCTCAAT 57.310 39.130 0.00 0.00 0.00 2.57
147 148 6.059787 ACTCAAGCTATGGTTCTCTCAATT 57.940 37.500 0.00 0.00 0.00 2.32
148 149 6.479884 ACTCAAGCTATGGTTCTCTCAATTT 58.520 36.000 0.00 0.00 0.00 1.82
149 150 6.944862 ACTCAAGCTATGGTTCTCTCAATTTT 59.055 34.615 0.00 0.00 0.00 1.82
150 151 7.120432 ACTCAAGCTATGGTTCTCTCAATTTTC 59.880 37.037 0.00 0.00 0.00 2.29
151 152 6.375455 TCAAGCTATGGTTCTCTCAATTTTCC 59.625 38.462 0.00 0.00 0.00 3.13
152 153 5.819991 AGCTATGGTTCTCTCAATTTTCCA 58.180 37.500 0.00 0.00 0.00 3.53
153 154 6.430007 AGCTATGGTTCTCTCAATTTTCCAT 58.570 36.000 0.00 0.00 37.80 3.41
154 155 6.894103 AGCTATGGTTCTCTCAATTTTCCATT 59.106 34.615 0.00 0.00 36.01 3.16
155 156 7.398332 AGCTATGGTTCTCTCAATTTTCCATTT 59.602 33.333 0.00 0.00 36.01 2.32
156 157 7.704047 GCTATGGTTCTCTCAATTTTCCATTTC 59.296 37.037 0.00 0.00 36.01 2.17
157 158 7.787623 ATGGTTCTCTCAATTTTCCATTTCT 57.212 32.000 0.00 0.00 31.31 2.52
158 159 6.985117 TGGTTCTCTCAATTTTCCATTTCTG 58.015 36.000 0.00 0.00 0.00 3.02
159 160 6.550854 TGGTTCTCTCAATTTTCCATTTCTGT 59.449 34.615 0.00 0.00 0.00 3.41
160 161 7.069826 TGGTTCTCTCAATTTTCCATTTCTGTT 59.930 33.333 0.00 0.00 0.00 3.16
161 162 7.928167 GGTTCTCTCAATTTTCCATTTCTGTTT 59.072 33.333 0.00 0.00 0.00 2.83
162 163 9.965824 GTTCTCTCAATTTTCCATTTCTGTTTA 57.034 29.630 0.00 0.00 0.00 2.01
174 175 8.718102 TCCATTTCTGTTTATAGAAGTAGTGC 57.282 34.615 0.00 0.00 37.91 4.40
175 176 8.318412 TCCATTTCTGTTTATAGAAGTAGTGCA 58.682 33.333 0.00 0.00 37.91 4.57
176 177 8.946085 CCATTTCTGTTTATAGAAGTAGTGCAA 58.054 33.333 0.00 0.00 37.91 4.08
179 180 9.555727 TTTCTGTTTATAGAAGTAGTGCAAACT 57.444 29.630 0.00 0.00 37.91 2.66
180 181 8.758633 TCTGTTTATAGAAGTAGTGCAAACTC 57.241 34.615 3.59 0.00 0.00 3.01
181 182 8.585881 TCTGTTTATAGAAGTAGTGCAAACTCT 58.414 33.333 3.59 5.82 0.00 3.24
182 183 8.534333 TGTTTATAGAAGTAGTGCAAACTCTG 57.466 34.615 3.59 0.00 0.00 3.35
183 184 8.148351 TGTTTATAGAAGTAGTGCAAACTCTGT 58.852 33.333 3.59 4.68 0.00 3.41
184 185 8.436200 GTTTATAGAAGTAGTGCAAACTCTGTG 58.564 37.037 3.59 0.00 0.00 3.66
185 186 3.733337 AGAAGTAGTGCAAACTCTGTGG 58.267 45.455 3.59 0.00 0.00 4.17
186 187 1.884235 AGTAGTGCAAACTCTGTGGC 58.116 50.000 0.00 0.00 0.00 5.01
187 188 1.140852 AGTAGTGCAAACTCTGTGGCA 59.859 47.619 0.00 0.00 0.00 4.92
189 190 4.653893 TGCAAACTCTGTGGCACA 57.346 50.000 20.76 20.76 0.00 4.57
190 191 3.114527 TGCAAACTCTGTGGCACAT 57.885 47.368 22.35 3.10 44.52 3.21
191 192 0.669619 TGCAAACTCTGTGGCACATG 59.330 50.000 22.35 16.78 44.52 3.21
192 193 0.953727 GCAAACTCTGTGGCACATGA 59.046 50.000 22.35 18.20 44.52 3.07
193 194 1.068748 GCAAACTCTGTGGCACATGAG 60.069 52.381 29.24 29.24 44.52 2.90
194 195 1.068748 CAAACTCTGTGGCACATGAGC 60.069 52.381 30.08 6.57 44.52 4.26
195 196 0.399454 AACTCTGTGGCACATGAGCT 59.601 50.000 30.08 22.35 44.52 4.09
196 197 0.399454 ACTCTGTGGCACATGAGCTT 59.601 50.000 30.08 18.30 44.52 3.74
197 198 0.803117 CTCTGTGGCACATGAGCTTG 59.197 55.000 22.35 7.64 44.52 4.01
198 199 1.211969 CTGTGGCACATGAGCTTGC 59.788 57.895 22.35 6.28 44.52 4.01
202 203 4.565531 GCACATGAGCTTGCCAAC 57.434 55.556 7.97 0.00 32.21 3.77
203 204 1.661480 GCACATGAGCTTGCCAACA 59.339 52.632 7.97 0.00 32.21 3.33
204 205 0.245539 GCACATGAGCTTGCCAACAT 59.754 50.000 7.97 0.00 32.21 2.71
205 206 1.337447 GCACATGAGCTTGCCAACATT 60.337 47.619 7.97 0.00 32.21 2.71
206 207 2.333926 CACATGAGCTTGCCAACATTG 58.666 47.619 0.00 0.00 0.00 2.82
221 222 3.372730 TTGGCCGCCAATGTGAGC 61.373 61.111 21.31 0.00 38.75 4.26
224 225 2.124736 GCCGCCAATGTGAGCCTA 60.125 61.111 0.00 0.00 0.00 3.93
225 226 1.748879 GCCGCCAATGTGAGCCTAA 60.749 57.895 0.00 0.00 0.00 2.69
226 227 1.993369 GCCGCCAATGTGAGCCTAAC 61.993 60.000 0.00 0.00 0.00 2.34
227 228 1.376609 CCGCCAATGTGAGCCTAACC 61.377 60.000 0.00 0.00 0.00 2.85
228 229 0.676466 CGCCAATGTGAGCCTAACCA 60.676 55.000 0.00 0.00 0.00 3.67
229 230 0.811281 GCCAATGTGAGCCTAACCAC 59.189 55.000 0.00 0.00 0.00 4.16
230 231 1.614317 GCCAATGTGAGCCTAACCACT 60.614 52.381 0.00 0.00 34.57 4.00
231 232 2.086869 CCAATGTGAGCCTAACCACTG 58.913 52.381 0.00 0.00 34.57 3.66
232 233 2.553028 CCAATGTGAGCCTAACCACTGT 60.553 50.000 0.00 0.00 34.57 3.55
233 234 2.744202 CAATGTGAGCCTAACCACTGTC 59.256 50.000 0.00 0.00 34.57 3.51
234 235 1.717032 TGTGAGCCTAACCACTGTCT 58.283 50.000 0.00 0.00 34.57 3.41
235 236 1.344438 TGTGAGCCTAACCACTGTCTG 59.656 52.381 0.00 0.00 34.57 3.51
237 238 1.267121 GAGCCTAACCACTGTCTGGA 58.733 55.000 0.00 0.00 43.95 3.86
238 239 1.205893 GAGCCTAACCACTGTCTGGAG 59.794 57.143 0.00 0.00 43.95 3.86
239 240 0.977395 GCCTAACCACTGTCTGGAGT 59.023 55.000 0.00 0.00 43.95 3.85
240 241 1.338200 GCCTAACCACTGTCTGGAGTG 60.338 57.143 0.00 0.00 43.95 3.51
245 246 2.751991 CACTGTCTGGAGTGGGAGT 58.248 57.895 0.00 0.00 39.85 3.85
246 247 0.605589 CACTGTCTGGAGTGGGAGTC 59.394 60.000 0.00 0.00 39.85 3.36
247 248 0.485099 ACTGTCTGGAGTGGGAGTCT 59.515 55.000 0.00 0.00 0.00 3.24
248 249 0.894141 CTGTCTGGAGTGGGAGTCTG 59.106 60.000 0.00 0.00 0.00 3.51
249 250 0.482887 TGTCTGGAGTGGGAGTCTGA 59.517 55.000 0.00 0.00 0.00 3.27
250 251 1.077828 TGTCTGGAGTGGGAGTCTGAT 59.922 52.381 0.00 0.00 0.00 2.90
251 252 1.480137 GTCTGGAGTGGGAGTCTGATG 59.520 57.143 0.00 0.00 0.00 3.07
252 253 1.077828 TCTGGAGTGGGAGTCTGATGT 59.922 52.381 0.00 0.00 0.00 3.06
253 254 2.311841 TCTGGAGTGGGAGTCTGATGTA 59.688 50.000 0.00 0.00 0.00 2.29
254 255 2.428890 CTGGAGTGGGAGTCTGATGTAC 59.571 54.545 0.00 0.00 0.00 2.90
255 256 1.757699 GGAGTGGGAGTCTGATGTACC 59.242 57.143 0.00 0.00 0.00 3.34
256 257 2.624557 GGAGTGGGAGTCTGATGTACCT 60.625 54.545 0.00 0.00 0.00 3.08
257 258 2.428890 GAGTGGGAGTCTGATGTACCTG 59.571 54.545 0.00 0.00 0.00 4.00
258 259 1.134670 GTGGGAGTCTGATGTACCTGC 60.135 57.143 0.00 0.00 0.00 4.85
259 260 0.466124 GGGAGTCTGATGTACCTGCC 59.534 60.000 0.00 0.00 0.00 4.85
260 261 0.466124 GGAGTCTGATGTACCTGCCC 59.534 60.000 0.00 0.00 0.00 5.36
261 262 1.195115 GAGTCTGATGTACCTGCCCA 58.805 55.000 0.00 0.00 0.00 5.36
262 263 1.555075 GAGTCTGATGTACCTGCCCAA 59.445 52.381 0.00 0.00 0.00 4.12
263 264 1.556911 AGTCTGATGTACCTGCCCAAG 59.443 52.381 0.00 0.00 0.00 3.61
264 265 1.279271 GTCTGATGTACCTGCCCAAGT 59.721 52.381 0.00 0.00 0.00 3.16
265 266 1.278985 TCTGATGTACCTGCCCAAGTG 59.721 52.381 0.00 0.00 0.00 3.16
266 267 0.327924 TGATGTACCTGCCCAAGTGG 59.672 55.000 0.00 0.00 37.09 4.00
267 268 0.618458 GATGTACCTGCCCAAGTGGA 59.382 55.000 0.00 0.00 37.39 4.02
268 269 1.212935 GATGTACCTGCCCAAGTGGAT 59.787 52.381 0.00 0.00 37.39 3.41
269 270 0.327924 TGTACCTGCCCAAGTGGATG 59.672 55.000 0.00 0.00 37.39 3.51
270 271 0.618458 GTACCTGCCCAAGTGGATGA 59.382 55.000 0.00 0.00 37.39 2.92
271 272 1.004277 GTACCTGCCCAAGTGGATGAA 59.996 52.381 0.00 0.00 37.39 2.57
272 273 0.706433 ACCTGCCCAAGTGGATGAAT 59.294 50.000 0.00 0.00 37.39 2.57
273 274 1.108776 CCTGCCCAAGTGGATGAATG 58.891 55.000 0.00 0.00 37.39 2.67
274 275 1.617804 CCTGCCCAAGTGGATGAATGT 60.618 52.381 0.00 0.00 37.39 2.71
275 276 1.475280 CTGCCCAAGTGGATGAATGTG 59.525 52.381 0.00 0.00 37.39 3.21
276 277 1.203038 TGCCCAAGTGGATGAATGTGT 60.203 47.619 0.00 0.00 37.39 3.72
277 278 1.895131 GCCCAAGTGGATGAATGTGTT 59.105 47.619 0.00 0.00 37.39 3.32
278 279 2.353011 GCCCAAGTGGATGAATGTGTTG 60.353 50.000 0.00 0.00 37.39 3.33
279 280 2.892852 CCCAAGTGGATGAATGTGTTGT 59.107 45.455 0.00 0.00 37.39 3.32
280 281 3.305539 CCCAAGTGGATGAATGTGTTGTG 60.306 47.826 0.00 0.00 37.39 3.33
281 282 3.305539 CCAAGTGGATGAATGTGTTGTGG 60.306 47.826 0.00 0.00 37.39 4.17
282 283 2.517959 AGTGGATGAATGTGTTGTGGG 58.482 47.619 0.00 0.00 0.00 4.61
283 284 1.067635 GTGGATGAATGTGTTGTGGGC 60.068 52.381 0.00 0.00 0.00 5.36
284 285 0.171007 GGATGAATGTGTTGTGGGCG 59.829 55.000 0.00 0.00 0.00 6.13
285 286 1.164411 GATGAATGTGTTGTGGGCGA 58.836 50.000 0.00 0.00 0.00 5.54
286 287 1.745087 GATGAATGTGTTGTGGGCGAT 59.255 47.619 0.00 0.00 0.00 4.58
287 288 2.481289 TGAATGTGTTGTGGGCGATA 57.519 45.000 0.00 0.00 0.00 2.92
288 289 2.997980 TGAATGTGTTGTGGGCGATAT 58.002 42.857 0.00 0.00 0.00 1.63
289 290 2.682352 TGAATGTGTTGTGGGCGATATG 59.318 45.455 0.00 0.00 0.00 1.78
290 291 1.024271 ATGTGTTGTGGGCGATATGC 58.976 50.000 0.00 0.00 45.38 3.14
299 300 4.855105 GCGATATGCCTCACCACA 57.145 55.556 0.00 0.00 37.76 4.17
300 301 2.609825 GCGATATGCCTCACCACAG 58.390 57.895 0.00 0.00 37.76 3.66
301 302 1.502163 GCGATATGCCTCACCACAGC 61.502 60.000 0.00 0.00 37.76 4.40
302 303 0.105593 CGATATGCCTCACCACAGCT 59.894 55.000 0.00 0.00 0.00 4.24
303 304 1.341209 CGATATGCCTCACCACAGCTA 59.659 52.381 0.00 0.00 0.00 3.32
304 305 2.224042 CGATATGCCTCACCACAGCTAA 60.224 50.000 0.00 0.00 0.00 3.09
305 306 2.988010 TATGCCTCACCACAGCTAAG 57.012 50.000 0.00 0.00 0.00 2.18
306 307 0.987294 ATGCCTCACCACAGCTAAGT 59.013 50.000 0.00 0.00 0.00 2.24
307 308 1.639722 TGCCTCACCACAGCTAAGTA 58.360 50.000 0.00 0.00 0.00 2.24
308 309 1.974957 TGCCTCACCACAGCTAAGTAA 59.025 47.619 0.00 0.00 0.00 2.24
309 310 2.571653 TGCCTCACCACAGCTAAGTAAT 59.428 45.455 0.00 0.00 0.00 1.89
310 311 2.939103 GCCTCACCACAGCTAAGTAATG 59.061 50.000 0.00 0.00 0.00 1.90
311 312 3.369471 GCCTCACCACAGCTAAGTAATGA 60.369 47.826 0.00 0.00 0.00 2.57
312 313 4.832248 CCTCACCACAGCTAAGTAATGAA 58.168 43.478 0.00 0.00 0.00 2.57
313 314 4.872691 CCTCACCACAGCTAAGTAATGAAG 59.127 45.833 0.00 0.00 0.00 3.02
314 315 4.253685 TCACCACAGCTAAGTAATGAAGC 58.746 43.478 0.00 0.00 36.48 3.86
316 317 5.186992 TCACCACAGCTAAGTAATGAAGCTA 59.813 40.000 0.53 0.00 44.58 3.32
317 318 6.051717 CACCACAGCTAAGTAATGAAGCTAT 58.948 40.000 0.53 0.00 44.58 2.97
318 319 6.018425 CACCACAGCTAAGTAATGAAGCTATG 60.018 42.308 0.53 0.48 44.58 2.23
319 320 5.049818 CCACAGCTAAGTAATGAAGCTATGC 60.050 44.000 1.63 0.00 44.58 3.14
320 321 5.757320 CACAGCTAAGTAATGAAGCTATGCT 59.243 40.000 0.53 0.00 44.58 3.79
337 338 7.496747 AGCTATGCTTTCCTAAACAAACAAAA 58.503 30.769 0.00 0.00 33.89 2.44
406 407 0.898789 ACACGTCTCCTTGGACCGAT 60.899 55.000 9.91 0.00 33.07 4.18
409 410 0.818296 CGTCTCCTTGGACCGATCTT 59.182 55.000 0.00 0.00 33.07 2.40
421 422 3.435671 GGACCGATCTTTCGTTTCAACAT 59.564 43.478 0.00 0.00 43.97 2.71
502 503 2.658325 CGTATGCGTAACGTATAAGGGC 59.342 50.000 0.00 0.00 36.36 5.19
503 504 2.894763 ATGCGTAACGTATAAGGGCA 57.105 45.000 0.00 0.00 29.28 5.36
504 505 2.894763 TGCGTAACGTATAAGGGCAT 57.105 45.000 0.00 0.00 0.00 4.40
505 506 2.475818 TGCGTAACGTATAAGGGCATG 58.524 47.619 0.00 0.00 0.00 4.06
506 507 2.159071 TGCGTAACGTATAAGGGCATGT 60.159 45.455 0.00 0.00 0.00 3.21
507 508 3.067883 TGCGTAACGTATAAGGGCATGTA 59.932 43.478 0.00 0.00 0.00 2.29
508 509 3.426525 GCGTAACGTATAAGGGCATGTAC 59.573 47.826 0.00 0.00 0.00 2.90
509 510 4.609947 CGTAACGTATAAGGGCATGTACA 58.390 43.478 0.00 0.00 0.00 2.90
510 511 5.042593 CGTAACGTATAAGGGCATGTACAA 58.957 41.667 0.00 0.00 0.00 2.41
511 512 5.693104 CGTAACGTATAAGGGCATGTACAAT 59.307 40.000 0.00 0.00 0.00 2.71
512 513 6.346279 CGTAACGTATAAGGGCATGTACAATG 60.346 42.308 0.00 0.12 0.00 2.82
513 514 4.385825 ACGTATAAGGGCATGTACAATGG 58.614 43.478 0.00 0.00 0.00 3.16
514 515 4.141574 ACGTATAAGGGCATGTACAATGGT 60.142 41.667 0.00 0.00 0.00 3.55
515 516 4.819630 CGTATAAGGGCATGTACAATGGTT 59.180 41.667 0.00 0.00 0.00 3.67
516 517 5.277779 CGTATAAGGGCATGTACAATGGTTG 60.278 44.000 0.00 0.00 0.00 3.77
517 518 2.897271 AGGGCATGTACAATGGTTGA 57.103 45.000 0.00 0.00 0.00 3.18
518 519 3.386932 AGGGCATGTACAATGGTTGAT 57.613 42.857 0.00 0.00 0.00 2.57
519 520 4.518278 AGGGCATGTACAATGGTTGATA 57.482 40.909 0.00 0.00 0.00 2.15
520 521 4.865905 AGGGCATGTACAATGGTTGATAA 58.134 39.130 0.00 0.00 0.00 1.75
521 522 4.889409 AGGGCATGTACAATGGTTGATAAG 59.111 41.667 0.00 0.00 0.00 1.73
522 523 4.887071 GGGCATGTACAATGGTTGATAAGA 59.113 41.667 0.00 0.00 0.00 2.10
523 524 5.536161 GGGCATGTACAATGGTTGATAAGAT 59.464 40.000 0.00 0.00 0.00 2.40
524 525 6.714810 GGGCATGTACAATGGTTGATAAGATA 59.285 38.462 0.00 0.00 0.00 1.98
525 526 7.094634 GGGCATGTACAATGGTTGATAAGATAG 60.095 40.741 0.00 0.00 0.00 2.08
526 527 7.445402 GGCATGTACAATGGTTGATAAGATAGT 59.555 37.037 0.00 0.00 0.00 2.12
527 528 8.499162 GCATGTACAATGGTTGATAAGATAGTC 58.501 37.037 0.00 0.00 0.00 2.59
528 529 9.770097 CATGTACAATGGTTGATAAGATAGTCT 57.230 33.333 0.00 0.00 0.00 3.24
546 547 9.979578 AGATAGTCTTATCTTAAGTCTTGCATG 57.020 33.333 1.63 0.00 42.67 4.06
547 548 9.757227 GATAGTCTTATCTTAAGTCTTGCATGT 57.243 33.333 1.63 0.00 34.16 3.21
548 549 7.840342 AGTCTTATCTTAAGTCTTGCATGTG 57.160 36.000 1.63 0.00 0.00 3.21
549 550 7.615403 AGTCTTATCTTAAGTCTTGCATGTGA 58.385 34.615 1.63 0.00 0.00 3.58
550 551 8.263640 AGTCTTATCTTAAGTCTTGCATGTGAT 58.736 33.333 1.63 0.00 0.00 3.06
551 552 8.887717 GTCTTATCTTAAGTCTTGCATGTGATT 58.112 33.333 1.63 0.00 0.00 2.57
552 553 9.453572 TCTTATCTTAAGTCTTGCATGTGATTT 57.546 29.630 1.63 0.00 0.00 2.17
556 557 8.484641 TCTTAAGTCTTGCATGTGATTTAGAG 57.515 34.615 1.63 2.95 0.00 2.43
557 558 8.314021 TCTTAAGTCTTGCATGTGATTTAGAGA 58.686 33.333 1.63 4.66 0.00 3.10
558 559 9.107177 CTTAAGTCTTGCATGTGATTTAGAGAT 57.893 33.333 0.00 0.00 0.00 2.75
559 560 6.922247 AGTCTTGCATGTGATTTAGAGATG 57.078 37.500 0.00 0.00 0.00 2.90
560 561 6.647229 AGTCTTGCATGTGATTTAGAGATGA 58.353 36.000 0.00 0.00 0.00 2.92
561 562 6.538021 AGTCTTGCATGTGATTTAGAGATGAC 59.462 38.462 0.00 0.00 0.00 3.06
562 563 6.314648 GTCTTGCATGTGATTTAGAGATGACA 59.685 38.462 0.00 0.00 0.00 3.58
563 564 6.880529 TCTTGCATGTGATTTAGAGATGACAA 59.119 34.615 0.00 0.00 27.25 3.18
564 565 7.391275 TCTTGCATGTGATTTAGAGATGACAAA 59.609 33.333 0.00 0.00 27.25 2.83
565 566 7.451501 TGCATGTGATTTAGAGATGACAAAA 57.548 32.000 0.00 0.00 27.25 2.44
566 567 7.884257 TGCATGTGATTTAGAGATGACAAAAA 58.116 30.769 0.00 0.00 27.25 1.94
639 640 9.802039 AGTAATTCCTAAAAATGTGGTAAGACA 57.198 29.630 0.00 0.00 0.00 3.41
653 654 9.935241 ATGTGGTAAGACATATTATGCTAAGAG 57.065 33.333 3.52 0.00 34.69 2.85
654 655 9.143155 TGTGGTAAGACATATTATGCTAAGAGA 57.857 33.333 3.52 0.00 0.00 3.10
693 694 9.574516 TTCTTTTAAATAAGAGAAGACAAGCCT 57.425 29.630 2.91 0.00 35.69 4.58
694 695 9.574516 TCTTTTAAATAAGAGAAGACAAGCCTT 57.425 29.630 0.00 0.00 30.87 4.35
720 721 8.608844 TTTTTATGAGTTCTCTCTTCTTCACC 57.391 34.615 1.53 0.00 40.98 4.02
721 722 7.546250 TTTATGAGTTCTCTCTTCTTCACCT 57.454 36.000 1.53 0.00 40.98 4.00
722 723 5.659440 ATGAGTTCTCTCTTCTTCACCTC 57.341 43.478 1.53 0.00 40.98 3.85
723 724 4.735369 TGAGTTCTCTCTTCTTCACCTCT 58.265 43.478 1.53 0.00 40.98 3.69
724 725 5.144100 TGAGTTCTCTCTTCTTCACCTCTT 58.856 41.667 1.53 0.00 40.98 2.85
725 726 5.242838 TGAGTTCTCTCTTCTTCACCTCTTC 59.757 44.000 1.53 0.00 40.98 2.87
726 727 5.144100 AGTTCTCTCTTCTTCACCTCTTCA 58.856 41.667 0.00 0.00 0.00 3.02
727 728 5.779771 AGTTCTCTCTTCTTCACCTCTTCAT 59.220 40.000 0.00 0.00 0.00 2.57
728 729 5.913137 TCTCTCTTCTTCACCTCTTCATC 57.087 43.478 0.00 0.00 0.00 2.92
729 730 5.579047 TCTCTCTTCTTCACCTCTTCATCT 58.421 41.667 0.00 0.00 0.00 2.90
730 731 6.726379 TCTCTCTTCTTCACCTCTTCATCTA 58.274 40.000 0.00 0.00 0.00 1.98
731 732 7.353525 TCTCTCTTCTTCACCTCTTCATCTAT 58.646 38.462 0.00 0.00 0.00 1.98
732 733 7.502226 TCTCTCTTCTTCACCTCTTCATCTATC 59.498 40.741 0.00 0.00 0.00 2.08
733 734 6.549364 TCTCTTCTTCACCTCTTCATCTATCC 59.451 42.308 0.00 0.00 0.00 2.59
734 735 6.439487 TCTTCTTCACCTCTTCATCTATCCT 58.561 40.000 0.00 0.00 0.00 3.24
735 736 7.587258 TCTTCTTCACCTCTTCATCTATCCTA 58.413 38.462 0.00 0.00 0.00 2.94
736 737 7.504238 TCTTCTTCACCTCTTCATCTATCCTAC 59.496 40.741 0.00 0.00 0.00 3.18
737 738 5.765677 TCTTCACCTCTTCATCTATCCTACG 59.234 44.000 0.00 0.00 0.00 3.51
738 739 5.050126 TCACCTCTTCATCTATCCTACGT 57.950 43.478 0.00 0.00 0.00 3.57
739 740 4.822350 TCACCTCTTCATCTATCCTACGTG 59.178 45.833 0.00 0.00 0.00 4.49
740 741 4.822350 CACCTCTTCATCTATCCTACGTGA 59.178 45.833 0.00 0.00 0.00 4.35
741 742 4.822896 ACCTCTTCATCTATCCTACGTGAC 59.177 45.833 0.00 0.00 0.00 3.67
742 743 4.822350 CCTCTTCATCTATCCTACGTGACA 59.178 45.833 0.00 0.00 0.00 3.58
743 744 5.475220 CCTCTTCATCTATCCTACGTGACAT 59.525 44.000 0.00 0.00 0.00 3.06
744 745 6.015856 CCTCTTCATCTATCCTACGTGACATT 60.016 42.308 0.00 0.00 0.00 2.71
745 746 6.739112 TCTTCATCTATCCTACGTGACATTG 58.261 40.000 0.00 0.00 0.00 2.82
746 747 4.871513 TCATCTATCCTACGTGACATTGC 58.128 43.478 0.00 0.00 0.00 3.56
747 748 4.584743 TCATCTATCCTACGTGACATTGCT 59.415 41.667 0.00 0.00 0.00 3.91
748 749 5.768164 TCATCTATCCTACGTGACATTGCTA 59.232 40.000 0.00 0.00 0.00 3.49
749 750 6.264518 TCATCTATCCTACGTGACATTGCTAA 59.735 38.462 0.00 0.00 0.00 3.09
750 751 6.073327 TCTATCCTACGTGACATTGCTAAG 57.927 41.667 0.00 0.00 0.00 2.18
751 752 5.826208 TCTATCCTACGTGACATTGCTAAGA 59.174 40.000 0.00 0.00 0.00 2.10
752 753 5.537300 ATCCTACGTGACATTGCTAAGAT 57.463 39.130 0.00 0.00 0.00 2.40
753 754 6.650427 ATCCTACGTGACATTGCTAAGATA 57.350 37.500 0.00 0.00 0.00 1.98
754 755 6.073327 TCCTACGTGACATTGCTAAGATAG 57.927 41.667 0.00 0.00 0.00 2.08
755 756 5.826208 TCCTACGTGACATTGCTAAGATAGA 59.174 40.000 0.00 0.00 0.00 1.98
756 757 6.320418 TCCTACGTGACATTGCTAAGATAGAA 59.680 38.462 0.00 0.00 0.00 2.10
757 758 7.014326 TCCTACGTGACATTGCTAAGATAGAAT 59.986 37.037 0.00 0.00 0.00 2.40
758 759 7.327275 CCTACGTGACATTGCTAAGATAGAATC 59.673 40.741 0.00 0.00 0.00 2.52
759 760 6.573434 ACGTGACATTGCTAAGATAGAATCA 58.427 36.000 0.00 0.00 0.00 2.57
760 761 7.212976 ACGTGACATTGCTAAGATAGAATCAT 58.787 34.615 0.00 0.00 0.00 2.45
761 762 7.712639 ACGTGACATTGCTAAGATAGAATCATT 59.287 33.333 0.00 0.00 0.00 2.57
762 763 8.219769 CGTGACATTGCTAAGATAGAATCATTC 58.780 37.037 0.00 0.00 0.00 2.67
763 764 9.270640 GTGACATTGCTAAGATAGAATCATTCT 57.729 33.333 4.98 4.98 43.72 2.40
769 770 9.716531 TTGCTAAGATAGAATCATTCTACATGG 57.283 33.333 9.40 2.78 44.43 3.66
770 771 7.821359 TGCTAAGATAGAATCATTCTACATGGC 59.179 37.037 9.40 11.82 44.43 4.40
771 772 7.279758 GCTAAGATAGAATCATTCTACATGGCC 59.720 40.741 9.40 0.00 44.43 5.36
803 809 2.524394 TATCTGCCCCTCCTCCGC 60.524 66.667 0.00 0.00 0.00 5.54
1428 1448 1.135199 TCCCGCTTCTGAACACGTATC 60.135 52.381 0.00 0.00 0.00 2.24
1436 1456 0.107410 TGAACACGTATCATGCCCCC 60.107 55.000 0.00 0.00 0.00 5.40
1456 1476 2.394708 CGCTTCGTTTTCTCTCAGTCA 58.605 47.619 0.00 0.00 0.00 3.41
1457 1477 2.989840 CGCTTCGTTTTCTCTCAGTCAT 59.010 45.455 0.00 0.00 0.00 3.06
1534 1554 9.119418 TCTGAAATATTCTCACAAGAAACAACA 57.881 29.630 0.00 0.00 44.49 3.33
1536 1556 8.681806 TGAAATATTCTCACAAGAAACAACACA 58.318 29.630 0.00 0.00 44.49 3.72
1537 1557 9.683069 GAAATATTCTCACAAGAAACAACACAT 57.317 29.630 0.00 0.00 44.49 3.21
1538 1558 9.683069 AAATATTCTCACAAGAAACAACACATC 57.317 29.630 0.00 0.00 44.49 3.06
1539 1559 6.698008 ATTCTCACAAGAAACAACACATCA 57.302 33.333 0.00 0.00 44.49 3.07
1541 1561 6.698008 TCTCACAAGAAACAACACATCAAT 57.302 33.333 0.00 0.00 0.00 2.57
1542 1562 6.728200 TCTCACAAGAAACAACACATCAATC 58.272 36.000 0.00 0.00 0.00 2.67
1543 1563 5.509771 TCACAAGAAACAACACATCAATCG 58.490 37.500 0.00 0.00 0.00 3.34
1544 1564 4.146961 CACAAGAAACAACACATCAATCGC 59.853 41.667 0.00 0.00 0.00 4.58
1545 1565 4.202000 ACAAGAAACAACACATCAATCGCA 60.202 37.500 0.00 0.00 0.00 5.10
1547 1567 4.290155 AGAAACAACACATCAATCGCAAC 58.710 39.130 0.00 0.00 0.00 4.17
1548 1568 3.988379 AACAACACATCAATCGCAACT 57.012 38.095 0.00 0.00 0.00 3.16
1549 1569 3.988379 ACAACACATCAATCGCAACTT 57.012 38.095 0.00 0.00 0.00 2.66
1550 1570 3.631144 ACAACACATCAATCGCAACTTG 58.369 40.909 0.00 0.00 0.00 3.16
1551 1571 2.981805 CAACACATCAATCGCAACTTGG 59.018 45.455 0.00 0.00 0.00 3.61
1579 1599 2.432146 GGAGATATGCACACAGTCCAGA 59.568 50.000 0.00 0.00 0.00 3.86
1581 1601 4.056740 GAGATATGCACACAGTCCAGATG 58.943 47.826 0.00 0.00 0.00 2.90
1586 1606 1.543208 GCACACAGTCCAGATGTCCAA 60.543 52.381 0.00 0.00 0.00 3.53
1587 1607 2.877300 GCACACAGTCCAGATGTCCAAT 60.877 50.000 0.00 0.00 0.00 3.16
1588 1608 3.619733 GCACACAGTCCAGATGTCCAATA 60.620 47.826 0.00 0.00 0.00 1.90
1609 1631 9.740239 CCAATACATGTTCATCATAGAAAAAGG 57.260 33.333 2.30 0.00 34.67 3.11
1779 1810 5.221322 GCCTCCAAATCCATCCAGAAATTAC 60.221 44.000 0.00 0.00 0.00 1.89
1783 1814 5.221048 CCAAATCCATCCAGAAATTACGGAC 60.221 44.000 0.00 0.00 0.00 4.79
1792 1823 4.401519 CCAGAAATTACGGACTAGGTCTGA 59.598 45.833 12.67 0.00 41.05 3.27
1829 1864 5.577164 GTCACACATATCCACAACAGAGTAC 59.423 44.000 0.00 0.00 0.00 2.73
1858 1893 2.567615 GAGCTTCTTCACCCTCACCTAA 59.432 50.000 0.00 0.00 0.00 2.69
1868 1903 3.136443 CACCCTCACCTAATAAGCATGGA 59.864 47.826 0.00 0.00 0.00 3.41
2114 2149 1.295423 GGCGAGGTTCAGTGCCTTA 59.705 57.895 0.00 0.00 44.16 2.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.541233 GGACCATACCAAGATCAGCCG 60.541 57.143 0.00 0.00 0.00 5.52
1 2 1.541233 CGGACCATACCAAGATCAGCC 60.541 57.143 0.00 0.00 0.00 4.85
2 3 1.541233 CCGGACCATACCAAGATCAGC 60.541 57.143 0.00 0.00 0.00 4.26
3 4 1.070758 CCCGGACCATACCAAGATCAG 59.929 57.143 0.73 0.00 0.00 2.90
4 5 1.128200 CCCGGACCATACCAAGATCA 58.872 55.000 0.73 0.00 0.00 2.92
5 6 1.129058 ACCCGGACCATACCAAGATC 58.871 55.000 0.73 0.00 0.00 2.75
6 7 0.837272 CACCCGGACCATACCAAGAT 59.163 55.000 0.73 0.00 0.00 2.40
7 8 1.268992 CCACCCGGACCATACCAAGA 61.269 60.000 0.73 0.00 0.00 3.02
8 9 1.223487 CCACCCGGACCATACCAAG 59.777 63.158 0.73 0.00 0.00 3.61
9 10 1.229561 TCCACCCGGACCATACCAA 60.230 57.895 0.73 0.00 35.91 3.67
10 11 1.687840 CTCCACCCGGACCATACCA 60.688 63.158 0.73 0.00 35.91 3.25
11 12 3.103091 GCTCCACCCGGACCATACC 62.103 68.421 0.73 0.00 35.91 2.73
12 13 2.029307 GAGCTCCACCCGGACCATAC 62.029 65.000 0.73 0.00 35.91 2.39
13 14 1.760875 GAGCTCCACCCGGACCATA 60.761 63.158 0.73 0.00 35.91 2.74
14 15 3.083997 GAGCTCCACCCGGACCAT 61.084 66.667 0.73 0.00 35.91 3.55
17 18 3.827898 CTCGAGCTCCACCCGGAC 61.828 72.222 8.47 0.00 35.91 4.79
18 19 4.043100 TCTCGAGCTCCACCCGGA 62.043 66.667 7.81 0.00 39.79 5.14
19 20 3.827898 GTCTCGAGCTCCACCCGG 61.828 72.222 7.81 0.00 0.00 5.73
20 21 4.180946 CGTCTCGAGCTCCACCCG 62.181 72.222 7.81 2.05 0.00 5.28
21 22 3.827898 CCGTCTCGAGCTCCACCC 61.828 72.222 7.81 0.00 0.00 4.61
22 23 2.750637 TCCGTCTCGAGCTCCACC 60.751 66.667 7.81 0.00 0.00 4.61
23 24 1.984321 GAGTCCGTCTCGAGCTCCAC 61.984 65.000 7.81 0.00 33.25 4.02
24 25 1.745864 GAGTCCGTCTCGAGCTCCA 60.746 63.158 7.81 0.00 33.25 3.86
25 26 1.745864 TGAGTCCGTCTCGAGCTCC 60.746 63.158 7.81 0.00 45.46 4.70
26 27 1.299562 TGTGAGTCCGTCTCGAGCTC 61.300 60.000 7.81 2.73 45.46 4.09
27 28 0.889638 TTGTGAGTCCGTCTCGAGCT 60.890 55.000 7.81 0.00 45.46 4.09
28 29 0.729816 GTTGTGAGTCCGTCTCGAGC 60.730 60.000 7.81 1.89 45.46 5.03
29 30 0.875728 AGTTGTGAGTCCGTCTCGAG 59.124 55.000 5.93 5.93 45.46 4.04
30 31 1.802960 GTAGTTGTGAGTCCGTCTCGA 59.197 52.381 0.00 0.00 45.46 4.04
31 32 1.805345 AGTAGTTGTGAGTCCGTCTCG 59.195 52.381 0.00 0.00 45.46 4.04
32 33 2.095161 CCAGTAGTTGTGAGTCCGTCTC 60.095 54.545 0.00 0.00 43.03 3.36
33 34 1.887198 CCAGTAGTTGTGAGTCCGTCT 59.113 52.381 0.00 0.00 0.00 4.18
34 35 1.669211 GCCAGTAGTTGTGAGTCCGTC 60.669 57.143 0.00 0.00 0.00 4.79
35 36 0.317479 GCCAGTAGTTGTGAGTCCGT 59.683 55.000 0.00 0.00 0.00 4.69
36 37 0.732880 CGCCAGTAGTTGTGAGTCCG 60.733 60.000 0.00 0.00 0.00 4.79
37 38 0.389948 CCGCCAGTAGTTGTGAGTCC 60.390 60.000 0.00 0.00 0.00 3.85
38 39 0.601558 TCCGCCAGTAGTTGTGAGTC 59.398 55.000 0.00 0.00 0.00 3.36
39 40 1.000955 CTTCCGCCAGTAGTTGTGAGT 59.999 52.381 0.00 0.00 0.00 3.41
40 41 1.714794 CTTCCGCCAGTAGTTGTGAG 58.285 55.000 0.00 0.00 0.00 3.51
41 42 0.320421 GCTTCCGCCAGTAGTTGTGA 60.320 55.000 0.00 0.00 0.00 3.58
42 43 2.162716 GCTTCCGCCAGTAGTTGTG 58.837 57.895 0.00 0.00 0.00 3.33
43 44 4.695560 GCTTCCGCCAGTAGTTGT 57.304 55.556 0.00 0.00 0.00 3.32
53 54 1.968540 GCATATCCAGGGCTTCCGC 60.969 63.158 0.00 0.00 35.17 5.54
54 55 1.669115 CGCATATCCAGGGCTTCCG 60.669 63.158 0.00 0.00 35.17 4.30
55 56 1.968540 GCGCATATCCAGGGCTTCC 60.969 63.158 0.30 0.00 41.20 3.46
56 57 0.819259 TTGCGCATATCCAGGGCTTC 60.819 55.000 12.75 0.00 44.29 3.86
57 58 0.820891 CTTGCGCATATCCAGGGCTT 60.821 55.000 12.75 0.00 44.29 4.35
58 59 1.228063 CTTGCGCATATCCAGGGCT 60.228 57.895 12.75 0.00 44.29 5.19
59 60 2.263741 CCTTGCGCATATCCAGGGC 61.264 63.158 12.75 0.00 44.24 5.19
60 61 0.396435 TACCTTGCGCATATCCAGGG 59.604 55.000 24.87 14.55 34.65 4.45
61 62 1.344438 TCTACCTTGCGCATATCCAGG 59.656 52.381 20.86 20.86 0.00 4.45
62 63 2.036475 AGTCTACCTTGCGCATATCCAG 59.964 50.000 12.75 4.68 0.00 3.86
63 64 2.035961 GAGTCTACCTTGCGCATATCCA 59.964 50.000 12.75 0.00 0.00 3.41
64 65 2.297597 AGAGTCTACCTTGCGCATATCC 59.702 50.000 12.75 0.00 0.00 2.59
65 66 3.651803 AGAGTCTACCTTGCGCATATC 57.348 47.619 12.75 0.69 0.00 1.63
66 67 3.551046 CGAAGAGTCTACCTTGCGCATAT 60.551 47.826 12.75 1.70 0.00 1.78
67 68 2.223502 CGAAGAGTCTACCTTGCGCATA 60.224 50.000 12.75 0.00 0.00 3.14
68 69 1.469940 CGAAGAGTCTACCTTGCGCAT 60.470 52.381 12.75 0.00 0.00 4.73
69 70 0.109272 CGAAGAGTCTACCTTGCGCA 60.109 55.000 5.66 5.66 0.00 6.09
70 71 0.802607 CCGAAGAGTCTACCTTGCGC 60.803 60.000 0.00 0.00 0.00 6.09
71 72 0.802607 GCCGAAGAGTCTACCTTGCG 60.803 60.000 0.00 0.00 0.00 4.85
72 73 0.802607 CGCCGAAGAGTCTACCTTGC 60.803 60.000 0.00 0.00 0.00 4.01
73 74 0.526662 ACGCCGAAGAGTCTACCTTG 59.473 55.000 0.00 0.00 0.00 3.61
74 75 2.119801 TACGCCGAAGAGTCTACCTT 57.880 50.000 0.00 0.00 0.00 3.50
75 76 1.948145 CATACGCCGAAGAGTCTACCT 59.052 52.381 0.00 0.00 0.00 3.08
76 77 1.599916 GCATACGCCGAAGAGTCTACC 60.600 57.143 0.00 0.00 0.00 3.18
77 78 1.756367 GCATACGCCGAAGAGTCTAC 58.244 55.000 0.00 0.00 0.00 2.59
78 79 0.306840 CGCATACGCCGAAGAGTCTA 59.693 55.000 0.00 0.00 33.11 2.59
79 80 1.064296 CGCATACGCCGAAGAGTCT 59.936 57.895 0.00 0.00 33.11 3.24
80 81 1.944676 CCGCATACGCCGAAGAGTC 60.945 63.158 0.00 0.00 38.22 3.36
81 82 2.104331 CCGCATACGCCGAAGAGT 59.896 61.111 0.00 0.00 38.22 3.24
82 83 3.330853 GCCGCATACGCCGAAGAG 61.331 66.667 0.00 0.00 38.22 2.85
83 84 4.884257 GGCCGCATACGCCGAAGA 62.884 66.667 0.00 0.00 38.22 2.87
90 91 3.112075 CTATGGCGGCCGCATACG 61.112 66.667 46.88 29.38 44.11 3.06
91 92 1.738099 CTCTATGGCGGCCGCATAC 60.738 63.158 46.88 31.99 44.11 2.39
92 93 2.656646 CTCTATGGCGGCCGCATA 59.343 61.111 46.88 35.99 44.11 3.14
93 94 4.320456 CCTCTATGGCGGCCGCAT 62.320 66.667 46.88 36.72 44.11 4.73
95 96 1.961180 ATATCCTCTATGGCGGCCGC 61.961 60.000 41.63 41.63 41.06 6.53
96 97 0.179100 CATATCCTCTATGGCGGCCG 60.179 60.000 24.05 24.05 35.26 6.13
97 98 1.195115 TCATATCCTCTATGGCGGCC 58.805 55.000 13.32 13.32 35.26 6.13
98 99 3.334583 TTTCATATCCTCTATGGCGGC 57.665 47.619 0.00 0.00 35.26 6.53
99 100 6.820335 TGATATTTCATATCCTCTATGGCGG 58.180 40.000 2.05 0.00 40.70 6.13
100 101 7.984050 AGTTGATATTTCATATCCTCTATGGCG 59.016 37.037 2.05 0.00 40.70 5.69
101 102 9.323985 GAGTTGATATTTCATATCCTCTATGGC 57.676 37.037 2.05 0.00 40.70 4.40
105 106 9.935241 GCTTGAGTTGATATTTCATATCCTCTA 57.065 33.333 2.05 0.25 40.70 2.43
106 107 8.658619 AGCTTGAGTTGATATTTCATATCCTCT 58.341 33.333 2.05 1.15 40.70 3.69
107 108 8.845413 AGCTTGAGTTGATATTTCATATCCTC 57.155 34.615 2.05 3.37 40.70 3.71
112 113 9.851686 AACCATAGCTTGAGTTGATATTTCATA 57.148 29.630 0.00 0.00 0.00 2.15
113 114 8.757982 AACCATAGCTTGAGTTGATATTTCAT 57.242 30.769 0.00 0.00 0.00 2.57
114 115 8.049117 AGAACCATAGCTTGAGTTGATATTTCA 58.951 33.333 0.00 0.00 0.00 2.69
115 116 8.443953 AGAACCATAGCTTGAGTTGATATTTC 57.556 34.615 0.00 0.00 0.00 2.17
116 117 8.270744 AGAGAACCATAGCTTGAGTTGATATTT 58.729 33.333 0.00 0.00 0.00 1.40
117 118 7.800092 AGAGAACCATAGCTTGAGTTGATATT 58.200 34.615 0.00 0.00 0.00 1.28
118 119 7.070447 TGAGAGAACCATAGCTTGAGTTGATAT 59.930 37.037 0.00 0.00 0.00 1.63
119 120 6.381133 TGAGAGAACCATAGCTTGAGTTGATA 59.619 38.462 0.00 0.00 0.00 2.15
120 121 5.188555 TGAGAGAACCATAGCTTGAGTTGAT 59.811 40.000 0.00 0.00 0.00 2.57
121 122 4.528206 TGAGAGAACCATAGCTTGAGTTGA 59.472 41.667 0.00 0.00 0.00 3.18
122 123 4.825422 TGAGAGAACCATAGCTTGAGTTG 58.175 43.478 0.00 0.00 0.00 3.16
123 124 5.489792 TTGAGAGAACCATAGCTTGAGTT 57.510 39.130 0.00 0.00 0.00 3.01
124 125 5.690464 ATTGAGAGAACCATAGCTTGAGT 57.310 39.130 0.00 0.00 0.00 3.41
125 126 6.998968 AAATTGAGAGAACCATAGCTTGAG 57.001 37.500 0.00 0.00 0.00 3.02
126 127 6.375455 GGAAAATTGAGAGAACCATAGCTTGA 59.625 38.462 0.00 0.00 0.00 3.02
127 128 6.151648 TGGAAAATTGAGAGAACCATAGCTTG 59.848 38.462 0.00 0.00 0.00 4.01
128 129 6.248433 TGGAAAATTGAGAGAACCATAGCTT 58.752 36.000 0.00 0.00 0.00 3.74
129 130 5.819991 TGGAAAATTGAGAGAACCATAGCT 58.180 37.500 0.00 0.00 0.00 3.32
130 131 6.705863 ATGGAAAATTGAGAGAACCATAGC 57.294 37.500 0.00 0.00 35.34 2.97
131 132 8.964772 AGAAATGGAAAATTGAGAGAACCATAG 58.035 33.333 0.00 0.00 35.93 2.23
132 133 8.742777 CAGAAATGGAAAATTGAGAGAACCATA 58.257 33.333 0.00 0.00 35.93 2.74
133 134 7.234166 ACAGAAATGGAAAATTGAGAGAACCAT 59.766 33.333 0.00 0.00 38.12 3.55
134 135 6.550854 ACAGAAATGGAAAATTGAGAGAACCA 59.449 34.615 0.00 0.00 0.00 3.67
135 136 6.986250 ACAGAAATGGAAAATTGAGAGAACC 58.014 36.000 0.00 0.00 0.00 3.62
136 137 8.877808 AAACAGAAATGGAAAATTGAGAGAAC 57.122 30.769 0.00 0.00 0.00 3.01
148 149 9.162764 GCACTACTTCTATAAACAGAAATGGAA 57.837 33.333 0.00 0.00 34.22 3.53
149 150 8.318412 TGCACTACTTCTATAAACAGAAATGGA 58.682 33.333 0.00 0.00 34.22 3.41
150 151 8.492673 TGCACTACTTCTATAAACAGAAATGG 57.507 34.615 0.00 0.00 34.22 3.16
153 154 9.555727 AGTTTGCACTACTTCTATAAACAGAAA 57.444 29.630 0.00 0.00 34.22 2.52
154 155 9.204570 GAGTTTGCACTACTTCTATAAACAGAA 57.795 33.333 2.43 0.00 31.22 3.02
155 156 8.585881 AGAGTTTGCACTACTTCTATAAACAGA 58.414 33.333 2.43 0.00 31.22 3.41
156 157 8.651588 CAGAGTTTGCACTACTTCTATAAACAG 58.348 37.037 2.43 0.00 31.22 3.16
157 158 8.148351 ACAGAGTTTGCACTACTTCTATAAACA 58.852 33.333 2.43 0.00 31.22 2.83
158 159 8.436200 CACAGAGTTTGCACTACTTCTATAAAC 58.564 37.037 2.43 0.00 31.22 2.01
159 160 7.602644 CCACAGAGTTTGCACTACTTCTATAAA 59.397 37.037 2.43 0.00 31.22 1.40
160 161 7.097192 CCACAGAGTTTGCACTACTTCTATAA 58.903 38.462 2.43 0.00 31.22 0.98
161 162 6.631016 CCACAGAGTTTGCACTACTTCTATA 58.369 40.000 2.43 0.00 31.22 1.31
162 163 5.482908 CCACAGAGTTTGCACTACTTCTAT 58.517 41.667 2.43 0.00 31.22 1.98
163 164 4.799586 GCCACAGAGTTTGCACTACTTCTA 60.800 45.833 2.43 0.00 31.22 2.10
164 165 3.733337 CCACAGAGTTTGCACTACTTCT 58.267 45.455 2.43 0.03 31.22 2.85
165 166 2.224314 GCCACAGAGTTTGCACTACTTC 59.776 50.000 2.43 0.00 31.22 3.01
166 167 2.222027 GCCACAGAGTTTGCACTACTT 58.778 47.619 2.43 0.00 31.22 2.24
167 168 1.140852 TGCCACAGAGTTTGCACTACT 59.859 47.619 0.41 0.41 31.22 2.57
168 169 1.593196 TGCCACAGAGTTTGCACTAC 58.407 50.000 0.00 0.00 31.22 2.73
170 171 4.984194 TGCCACAGAGTTTGCACT 57.016 50.000 0.00 0.00 35.17 4.40
172 173 0.669619 CATGTGCCACAGAGTTTGCA 59.330 50.000 3.00 0.00 0.00 4.08
173 174 0.953727 TCATGTGCCACAGAGTTTGC 59.046 50.000 3.00 0.00 0.00 3.68
174 175 1.068748 GCTCATGTGCCACAGAGTTTG 60.069 52.381 18.86 7.38 30.96 2.93
175 176 1.202855 AGCTCATGTGCCACAGAGTTT 60.203 47.619 15.81 9.90 30.96 2.66
176 177 0.399454 AGCTCATGTGCCACAGAGTT 59.601 50.000 15.81 13.52 30.96 3.01
177 178 0.399454 AAGCTCATGTGCCACAGAGT 59.601 50.000 15.81 8.64 30.96 3.24
178 179 0.803117 CAAGCTCATGTGCCACAGAG 59.197 55.000 15.81 15.58 31.25 3.35
179 180 1.239296 GCAAGCTCATGTGCCACAGA 61.239 55.000 15.81 0.39 34.58 3.41
180 181 1.211969 GCAAGCTCATGTGCCACAG 59.788 57.895 15.81 5.27 34.58 3.66
181 182 3.357919 GCAAGCTCATGTGCCACA 58.642 55.556 15.81 0.00 34.58 4.17
185 186 0.245539 ATGTTGGCAAGCTCATGTGC 59.754 50.000 11.79 11.79 40.14 4.57
186 187 2.333926 CAATGTTGGCAAGCTCATGTG 58.666 47.619 0.00 0.00 0.00 3.21
187 188 1.274167 CCAATGTTGGCAAGCTCATGT 59.726 47.619 0.00 0.00 42.21 3.21
188 189 2.004583 CCAATGTTGGCAAGCTCATG 57.995 50.000 0.00 0.00 42.21 3.07
206 207 3.697439 TAGGCTCACATTGGCGGCC 62.697 63.158 13.32 13.32 42.74 6.13
207 208 1.748879 TTAGGCTCACATTGGCGGC 60.749 57.895 0.00 0.00 35.01 6.53
208 209 1.376609 GGTTAGGCTCACATTGGCGG 61.377 60.000 0.68 0.00 35.01 6.13
209 210 0.676466 TGGTTAGGCTCACATTGGCG 60.676 55.000 0.68 0.00 35.01 5.69
210 211 0.811281 GTGGTTAGGCTCACATTGGC 59.189 55.000 0.68 0.00 34.32 4.52
211 212 2.086869 CAGTGGTTAGGCTCACATTGG 58.913 52.381 7.47 0.00 36.43 3.16
212 213 2.744202 GACAGTGGTTAGGCTCACATTG 59.256 50.000 7.47 7.14 36.43 2.82
213 214 2.639839 AGACAGTGGTTAGGCTCACATT 59.360 45.455 7.47 0.00 36.43 2.71
214 215 2.027745 CAGACAGTGGTTAGGCTCACAT 60.028 50.000 7.47 0.00 36.43 3.21
215 216 1.344438 CAGACAGTGGTTAGGCTCACA 59.656 52.381 7.47 0.00 36.43 3.58
216 217 1.338200 CCAGACAGTGGTTAGGCTCAC 60.338 57.143 0.00 0.00 42.17 3.51
217 218 0.976641 CCAGACAGTGGTTAGGCTCA 59.023 55.000 0.00 0.00 42.17 4.26
218 219 3.842869 CCAGACAGTGGTTAGGCTC 57.157 57.895 0.00 0.00 42.17 4.70
227 228 0.605589 GACTCCCACTCCAGACAGTG 59.394 60.000 0.00 0.00 43.13 3.66
228 229 0.485099 AGACTCCCACTCCAGACAGT 59.515 55.000 0.00 0.00 0.00 3.55
229 230 0.894141 CAGACTCCCACTCCAGACAG 59.106 60.000 0.00 0.00 0.00 3.51
230 231 0.482887 TCAGACTCCCACTCCAGACA 59.517 55.000 0.00 0.00 0.00 3.41
231 232 1.480137 CATCAGACTCCCACTCCAGAC 59.520 57.143 0.00 0.00 0.00 3.51
232 233 1.077828 ACATCAGACTCCCACTCCAGA 59.922 52.381 0.00 0.00 0.00 3.86
233 234 1.566211 ACATCAGACTCCCACTCCAG 58.434 55.000 0.00 0.00 0.00 3.86
234 235 2.457598 GTACATCAGACTCCCACTCCA 58.542 52.381 0.00 0.00 0.00 3.86
235 236 1.757699 GGTACATCAGACTCCCACTCC 59.242 57.143 0.00 0.00 0.00 3.85
236 237 2.428890 CAGGTACATCAGACTCCCACTC 59.571 54.545 0.00 0.00 0.00 3.51
237 238 2.461695 CAGGTACATCAGACTCCCACT 58.538 52.381 0.00 0.00 0.00 4.00
238 239 1.134670 GCAGGTACATCAGACTCCCAC 60.135 57.143 0.00 0.00 0.00 4.61
239 240 1.195115 GCAGGTACATCAGACTCCCA 58.805 55.000 0.00 0.00 0.00 4.37
240 241 0.466124 GGCAGGTACATCAGACTCCC 59.534 60.000 0.00 0.00 0.00 4.30
241 242 0.466124 GGGCAGGTACATCAGACTCC 59.534 60.000 0.00 0.00 0.00 3.85
242 243 1.195115 TGGGCAGGTACATCAGACTC 58.805 55.000 0.00 0.00 0.00 3.36
243 244 1.556911 CTTGGGCAGGTACATCAGACT 59.443 52.381 0.00 0.00 0.00 3.24
244 245 1.279271 ACTTGGGCAGGTACATCAGAC 59.721 52.381 0.00 0.00 0.00 3.51
245 246 1.278985 CACTTGGGCAGGTACATCAGA 59.721 52.381 0.00 0.00 0.00 3.27
246 247 1.679944 CCACTTGGGCAGGTACATCAG 60.680 57.143 0.00 0.00 0.00 2.90
247 248 0.327924 CCACTTGGGCAGGTACATCA 59.672 55.000 0.00 0.00 0.00 3.07
248 249 0.618458 TCCACTTGGGCAGGTACATC 59.382 55.000 0.00 0.00 36.21 3.06
249 250 1.064463 CATCCACTTGGGCAGGTACAT 60.064 52.381 0.00 0.00 36.21 2.29
250 251 0.327924 CATCCACTTGGGCAGGTACA 59.672 55.000 0.00 0.00 36.21 2.90
251 252 0.618458 TCATCCACTTGGGCAGGTAC 59.382 55.000 0.00 0.00 36.21 3.34
252 253 1.367346 TTCATCCACTTGGGCAGGTA 58.633 50.000 0.00 0.00 36.21 3.08
253 254 0.706433 ATTCATCCACTTGGGCAGGT 59.294 50.000 0.00 0.00 36.21 4.00
254 255 1.108776 CATTCATCCACTTGGGCAGG 58.891 55.000 0.00 0.00 36.21 4.85
255 256 1.475280 CACATTCATCCACTTGGGCAG 59.525 52.381 0.00 0.00 36.21 4.85
256 257 1.203038 ACACATTCATCCACTTGGGCA 60.203 47.619 0.00 0.00 36.21 5.36
257 258 1.549203 ACACATTCATCCACTTGGGC 58.451 50.000 0.00 0.00 36.21 5.36
258 259 2.892852 ACAACACATTCATCCACTTGGG 59.107 45.455 0.00 0.00 35.41 4.12
259 260 3.305539 CCACAACACATTCATCCACTTGG 60.306 47.826 0.00 0.00 0.00 3.61
260 261 3.305539 CCCACAACACATTCATCCACTTG 60.306 47.826 0.00 0.00 0.00 3.16
261 262 2.892852 CCCACAACACATTCATCCACTT 59.107 45.455 0.00 0.00 0.00 3.16
262 263 2.517959 CCCACAACACATTCATCCACT 58.482 47.619 0.00 0.00 0.00 4.00
263 264 1.067635 GCCCACAACACATTCATCCAC 60.068 52.381 0.00 0.00 0.00 4.02
264 265 1.255882 GCCCACAACACATTCATCCA 58.744 50.000 0.00 0.00 0.00 3.41
265 266 0.171007 CGCCCACAACACATTCATCC 59.829 55.000 0.00 0.00 0.00 3.51
266 267 1.164411 TCGCCCACAACACATTCATC 58.836 50.000 0.00 0.00 0.00 2.92
267 268 1.838112 ATCGCCCACAACACATTCAT 58.162 45.000 0.00 0.00 0.00 2.57
268 269 2.481289 TATCGCCCACAACACATTCA 57.519 45.000 0.00 0.00 0.00 2.57
269 270 2.541588 GCATATCGCCCACAACACATTC 60.542 50.000 0.00 0.00 32.94 2.67
270 271 1.405105 GCATATCGCCCACAACACATT 59.595 47.619 0.00 0.00 32.94 2.71
271 272 1.024271 GCATATCGCCCACAACACAT 58.976 50.000 0.00 0.00 32.94 3.21
272 273 2.476772 GCATATCGCCCACAACACA 58.523 52.632 0.00 0.00 32.94 3.72
282 283 1.502163 GCTGTGGTGAGGCATATCGC 61.502 60.000 0.00 0.00 41.28 4.58
283 284 0.105593 AGCTGTGGTGAGGCATATCG 59.894 55.000 0.00 0.00 0.00 2.92
284 285 3.181461 ACTTAGCTGTGGTGAGGCATATC 60.181 47.826 0.00 0.00 0.00 1.63
285 286 2.774234 ACTTAGCTGTGGTGAGGCATAT 59.226 45.455 0.00 0.00 0.00 1.78
286 287 2.187958 ACTTAGCTGTGGTGAGGCATA 58.812 47.619 0.00 0.00 0.00 3.14
287 288 0.987294 ACTTAGCTGTGGTGAGGCAT 59.013 50.000 0.00 0.00 0.00 4.40
288 289 1.639722 TACTTAGCTGTGGTGAGGCA 58.360 50.000 0.00 0.00 0.00 4.75
289 290 2.762535 TTACTTAGCTGTGGTGAGGC 57.237 50.000 0.00 0.00 0.00 4.70
290 291 4.471904 TCATTACTTAGCTGTGGTGAGG 57.528 45.455 0.00 0.00 0.00 3.86
291 292 4.331168 GCTTCATTACTTAGCTGTGGTGAG 59.669 45.833 0.00 0.00 32.26 3.51
292 293 4.020218 AGCTTCATTACTTAGCTGTGGTGA 60.020 41.667 0.00 0.00 43.25 4.02
293 294 4.256920 AGCTTCATTACTTAGCTGTGGTG 58.743 43.478 0.00 0.00 43.25 4.17
294 295 4.559862 AGCTTCATTACTTAGCTGTGGT 57.440 40.909 0.00 0.00 43.25 4.16
295 296 6.536731 CATAGCTTCATTACTTAGCTGTGG 57.463 41.667 10.90 0.00 45.03 4.17
296 297 6.259608 AAGCATAGCTTCATTACTTAGCTGTG 59.740 38.462 13.49 13.49 46.77 3.66
297 298 5.923204 AGCATAGCTTCATTACTTAGCTGT 58.077 37.500 0.00 0.00 44.47 4.40
298 299 6.857777 AAGCATAGCTTCATTACTTAGCTG 57.142 37.500 0.00 0.00 46.77 4.24
312 313 6.648879 TTGTTTGTTTAGGAAAGCATAGCT 57.351 33.333 0.00 0.00 42.56 3.32
313 314 7.707774 TTTTGTTTGTTTAGGAAAGCATAGC 57.292 32.000 0.00 0.00 0.00 2.97
348 349 1.289380 CGCCCGGGCTATCTTAGTC 59.711 63.158 41.01 10.73 39.32 2.59
351 352 2.840572 TGCGCCCGGGCTATCTTA 60.841 61.111 41.01 18.61 39.32 2.10
352 353 4.241555 CTGCGCCCGGGCTATCTT 62.242 66.667 41.01 0.00 39.32 2.40
406 407 1.265635 CGGCCATGTTGAAACGAAAGA 59.734 47.619 2.24 0.00 0.00 2.52
409 410 0.820074 ACCGGCCATGTTGAAACGAA 60.820 50.000 0.00 0.00 0.00 3.85
453 454 1.076632 AGTAGGTGAGCGGAGGAGG 60.077 63.158 0.00 0.00 0.00 4.30
454 455 0.394488 TGAGTAGGTGAGCGGAGGAG 60.394 60.000 0.00 0.00 0.00 3.69
455 456 0.039180 TTGAGTAGGTGAGCGGAGGA 59.961 55.000 0.00 0.00 0.00 3.71
496 497 4.308526 TCAACCATTGTACATGCCCTTA 57.691 40.909 0.00 0.00 0.00 2.69
497 498 3.168035 TCAACCATTGTACATGCCCTT 57.832 42.857 0.00 0.00 0.00 3.95
498 499 2.897271 TCAACCATTGTACATGCCCT 57.103 45.000 0.00 0.00 0.00 5.19
499 500 4.887071 TCTTATCAACCATTGTACATGCCC 59.113 41.667 0.00 0.00 0.00 5.36
500 501 6.639632 ATCTTATCAACCATTGTACATGCC 57.360 37.500 0.00 0.00 0.00 4.40
501 502 8.383318 ACTATCTTATCAACCATTGTACATGC 57.617 34.615 0.00 0.00 0.00 4.06
502 503 9.770097 AGACTATCTTATCAACCATTGTACATG 57.230 33.333 0.00 0.00 0.00 3.21
520 521 9.979578 CATGCAAGACTTAAGATAAGACTATCT 57.020 33.333 10.09 0.00 45.21 1.98
521 522 9.757227 ACATGCAAGACTTAAGATAAGACTATC 57.243 33.333 10.09 0.00 35.10 2.08
522 523 9.539825 CACATGCAAGACTTAAGATAAGACTAT 57.460 33.333 10.09 0.00 0.00 2.12
523 524 8.749354 TCACATGCAAGACTTAAGATAAGACTA 58.251 33.333 10.09 0.00 0.00 2.59
524 525 7.615403 TCACATGCAAGACTTAAGATAAGACT 58.385 34.615 10.09 0.83 0.00 3.24
525 526 7.834068 TCACATGCAAGACTTAAGATAAGAC 57.166 36.000 10.09 0.00 0.00 3.01
526 527 9.453572 AAATCACATGCAAGACTTAAGATAAGA 57.546 29.630 10.09 0.00 0.00 2.10
530 531 9.107177 CTCTAAATCACATGCAAGACTTAAGAT 57.893 33.333 10.09 0.00 0.00 2.40
531 532 8.314021 TCTCTAAATCACATGCAAGACTTAAGA 58.686 33.333 10.09 0.00 0.00 2.10
532 533 8.484641 TCTCTAAATCACATGCAAGACTTAAG 57.515 34.615 0.00 0.00 0.00 1.85
533 534 8.886719 CATCTCTAAATCACATGCAAGACTTAA 58.113 33.333 0.00 0.00 0.00 1.85
534 535 8.260114 TCATCTCTAAATCACATGCAAGACTTA 58.740 33.333 0.00 0.00 0.00 2.24
535 536 7.065563 GTCATCTCTAAATCACATGCAAGACTT 59.934 37.037 0.00 0.00 0.00 3.01
536 537 6.538021 GTCATCTCTAAATCACATGCAAGACT 59.462 38.462 0.00 0.00 0.00 3.24
537 538 6.314648 TGTCATCTCTAAATCACATGCAAGAC 59.685 38.462 0.00 0.00 0.00 3.01
538 539 6.408869 TGTCATCTCTAAATCACATGCAAGA 58.591 36.000 0.00 0.00 0.00 3.02
539 540 6.673154 TGTCATCTCTAAATCACATGCAAG 57.327 37.500 0.00 0.00 0.00 4.01
540 541 7.451501 TTTGTCATCTCTAAATCACATGCAA 57.548 32.000 0.00 0.00 0.00 4.08
541 542 7.451501 TTTTGTCATCTCTAAATCACATGCA 57.548 32.000 0.00 0.00 0.00 3.96
613 614 9.802039 TGTCTTACCACATTTTTAGGAATTACT 57.198 29.630 0.00 0.00 0.00 2.24
627 628 9.935241 CTCTTAGCATAATATGTCTTACCACAT 57.065 33.333 1.92 0.00 40.28 3.21
628 629 9.143155 TCTCTTAGCATAATATGTCTTACCACA 57.857 33.333 1.92 0.00 0.00 4.17
666 667 9.833182 GGCTTGTCTTCTCTTATTTAAAAGAAG 57.167 33.333 16.35 16.35 43.87 2.85
667 668 9.574516 AGGCTTGTCTTCTCTTATTTAAAAGAA 57.425 29.630 0.00 0.00 35.14 2.52
668 669 9.574516 AAGGCTTGTCTTCTCTTATTTAAAAGA 57.425 29.630 0.00 0.00 34.39 2.52
695 696 8.432805 AGGTGAAGAAGAGAGAACTCATAAAAA 58.567 33.333 4.64 0.00 44.79 1.94
696 697 7.967908 AGGTGAAGAAGAGAGAACTCATAAAA 58.032 34.615 4.64 0.00 44.79 1.52
697 698 7.453126 AGAGGTGAAGAAGAGAGAACTCATAAA 59.547 37.037 4.64 0.00 44.79 1.40
698 699 6.951198 AGAGGTGAAGAAGAGAGAACTCATAA 59.049 38.462 4.64 0.00 44.79 1.90
699 700 6.489603 AGAGGTGAAGAAGAGAGAACTCATA 58.510 40.000 4.64 0.00 44.79 2.15
700 701 5.332743 AGAGGTGAAGAAGAGAGAACTCAT 58.667 41.667 4.64 0.00 44.79 2.90
701 702 4.735369 AGAGGTGAAGAAGAGAGAACTCA 58.265 43.478 4.64 0.00 44.79 3.41
702 703 5.242838 TGAAGAGGTGAAGAAGAGAGAACTC 59.757 44.000 0.00 0.00 42.90 3.01
703 704 5.144100 TGAAGAGGTGAAGAAGAGAGAACT 58.856 41.667 0.00 0.00 0.00 3.01
704 705 5.461032 TGAAGAGGTGAAGAAGAGAGAAC 57.539 43.478 0.00 0.00 0.00 3.01
705 706 6.015918 AGATGAAGAGGTGAAGAAGAGAGAA 58.984 40.000 0.00 0.00 0.00 2.87
706 707 5.579047 AGATGAAGAGGTGAAGAAGAGAGA 58.421 41.667 0.00 0.00 0.00 3.10
707 708 5.920193 AGATGAAGAGGTGAAGAAGAGAG 57.080 43.478 0.00 0.00 0.00 3.20
708 709 6.549364 GGATAGATGAAGAGGTGAAGAAGAGA 59.451 42.308 0.00 0.00 0.00 3.10
709 710 6.550854 AGGATAGATGAAGAGGTGAAGAAGAG 59.449 42.308 0.00 0.00 0.00 2.85
710 711 6.439487 AGGATAGATGAAGAGGTGAAGAAGA 58.561 40.000 0.00 0.00 0.00 2.87
711 712 6.729690 AGGATAGATGAAGAGGTGAAGAAG 57.270 41.667 0.00 0.00 0.00 2.85
712 713 6.263392 CGTAGGATAGATGAAGAGGTGAAGAA 59.737 42.308 0.00 0.00 0.00 2.52
713 714 5.765677 CGTAGGATAGATGAAGAGGTGAAGA 59.234 44.000 0.00 0.00 0.00 2.87
714 715 5.533154 ACGTAGGATAGATGAAGAGGTGAAG 59.467 44.000 0.00 0.00 0.00 3.02
715 716 5.299531 CACGTAGGATAGATGAAGAGGTGAA 59.700 44.000 0.00 0.00 0.00 3.18
716 717 4.822350 CACGTAGGATAGATGAAGAGGTGA 59.178 45.833 0.00 0.00 0.00 4.02
717 718 4.822350 TCACGTAGGATAGATGAAGAGGTG 59.178 45.833 0.00 0.00 0.00 4.00
718 719 4.822896 GTCACGTAGGATAGATGAAGAGGT 59.177 45.833 0.00 0.00 0.00 3.85
719 720 4.822350 TGTCACGTAGGATAGATGAAGAGG 59.178 45.833 0.00 0.00 0.00 3.69
720 721 6.567687 ATGTCACGTAGGATAGATGAAGAG 57.432 41.667 0.00 0.00 0.00 2.85
721 722 6.735968 GCAATGTCACGTAGGATAGATGAAGA 60.736 42.308 0.00 0.00 0.00 2.87
722 723 5.403766 GCAATGTCACGTAGGATAGATGAAG 59.596 44.000 0.00 0.00 0.00 3.02
723 724 5.069119 AGCAATGTCACGTAGGATAGATGAA 59.931 40.000 0.00 0.00 0.00 2.57
724 725 4.584743 AGCAATGTCACGTAGGATAGATGA 59.415 41.667 0.00 0.00 0.00 2.92
725 726 4.876125 AGCAATGTCACGTAGGATAGATG 58.124 43.478 0.00 0.00 0.00 2.90
726 727 6.490381 TCTTAGCAATGTCACGTAGGATAGAT 59.510 38.462 0.00 0.00 0.00 1.98
727 728 5.826208 TCTTAGCAATGTCACGTAGGATAGA 59.174 40.000 0.00 0.00 0.00 1.98
728 729 6.073327 TCTTAGCAATGTCACGTAGGATAG 57.927 41.667 0.00 0.00 0.00 2.08
729 730 6.650427 ATCTTAGCAATGTCACGTAGGATA 57.350 37.500 0.00 0.00 0.00 2.59
730 731 5.537300 ATCTTAGCAATGTCACGTAGGAT 57.463 39.130 0.00 0.00 0.00 3.24
731 732 5.826208 TCTATCTTAGCAATGTCACGTAGGA 59.174 40.000 0.00 0.00 0.00 2.94
732 733 6.073327 TCTATCTTAGCAATGTCACGTAGG 57.927 41.667 0.00 0.00 0.00 3.18
733 734 7.862873 TGATTCTATCTTAGCAATGTCACGTAG 59.137 37.037 0.00 0.00 0.00 3.51
734 735 7.712797 TGATTCTATCTTAGCAATGTCACGTA 58.287 34.615 0.00 0.00 0.00 3.57
735 736 6.573434 TGATTCTATCTTAGCAATGTCACGT 58.427 36.000 0.00 0.00 0.00 4.49
736 737 7.649370 ATGATTCTATCTTAGCAATGTCACG 57.351 36.000 0.00 0.00 0.00 4.35
737 738 9.270640 AGAATGATTCTATCTTAGCAATGTCAC 57.729 33.333 5.78 0.00 38.49 3.67
743 744 9.716531 CCATGTAGAATGATTCTATCTTAGCAA 57.283 33.333 17.07 0.00 43.59 3.91
744 745 7.821359 GCCATGTAGAATGATTCTATCTTAGCA 59.179 37.037 17.07 10.04 43.59 3.49
745 746 7.279758 GGCCATGTAGAATGATTCTATCTTAGC 59.720 40.741 17.07 15.12 43.59 3.09
746 747 8.538701 AGGCCATGTAGAATGATTCTATCTTAG 58.461 37.037 17.07 7.69 43.59 2.18
747 748 8.441311 AGGCCATGTAGAATGATTCTATCTTA 57.559 34.615 17.07 6.15 43.59 2.10
748 749 7.327064 AGGCCATGTAGAATGATTCTATCTT 57.673 36.000 17.07 7.48 43.59 2.40
749 750 6.949117 AGGCCATGTAGAATGATTCTATCT 57.051 37.500 17.07 6.03 43.59 1.98
750 751 7.550906 GGTTAGGCCATGTAGAATGATTCTATC 59.449 40.741 17.07 11.51 39.65 2.08
751 752 7.238514 AGGTTAGGCCATGTAGAATGATTCTAT 59.761 37.037 17.07 1.64 41.06 1.98
752 753 6.558775 AGGTTAGGCCATGTAGAATGATTCTA 59.441 38.462 10.70 10.70 39.43 2.10
753 754 5.370880 AGGTTAGGCCATGTAGAATGATTCT 59.629 40.000 12.86 12.86 40.92 2.40
754 755 5.625150 AGGTTAGGCCATGTAGAATGATTC 58.375 41.667 5.01 0.00 40.61 2.52
755 756 5.370880 AGAGGTTAGGCCATGTAGAATGATT 59.629 40.000 5.01 0.00 40.61 2.57
756 757 4.910304 AGAGGTTAGGCCATGTAGAATGAT 59.090 41.667 5.01 0.00 40.61 2.45
757 758 4.298626 AGAGGTTAGGCCATGTAGAATGA 58.701 43.478 5.01 0.00 40.61 2.57
758 759 4.503991 GGAGAGGTTAGGCCATGTAGAATG 60.504 50.000 5.01 0.00 40.61 2.67
759 760 3.648545 GGAGAGGTTAGGCCATGTAGAAT 59.351 47.826 5.01 0.00 40.61 2.40
760 761 3.039011 GGAGAGGTTAGGCCATGTAGAA 58.961 50.000 5.01 0.00 40.61 2.10
761 762 2.023404 TGGAGAGGTTAGGCCATGTAGA 60.023 50.000 5.01 0.00 40.61 2.59
762 763 2.398588 TGGAGAGGTTAGGCCATGTAG 58.601 52.381 5.01 0.00 40.61 2.74
763 764 2.561209 TGGAGAGGTTAGGCCATGTA 57.439 50.000 5.01 0.00 40.61 2.29
764 765 1.898863 ATGGAGAGGTTAGGCCATGT 58.101 50.000 5.01 0.00 39.54 3.21
765 766 2.441001 AGAATGGAGAGGTTAGGCCATG 59.559 50.000 5.01 0.00 40.09 3.66
766 767 2.781667 AGAATGGAGAGGTTAGGCCAT 58.218 47.619 5.01 0.00 42.66 4.40
767 768 2.270434 AGAATGGAGAGGTTAGGCCA 57.730 50.000 5.01 0.00 40.61 5.36
768 769 4.020662 CAGATAGAATGGAGAGGTTAGGCC 60.021 50.000 0.00 0.00 37.58 5.19
769 770 4.562552 GCAGATAGAATGGAGAGGTTAGGC 60.563 50.000 0.00 0.00 0.00 3.93
770 771 4.020662 GGCAGATAGAATGGAGAGGTTAGG 60.021 50.000 0.00 0.00 0.00 2.69
771 772 4.020662 GGGCAGATAGAATGGAGAGGTTAG 60.021 50.000 0.00 0.00 0.00 2.34
919 925 0.382515 CAGAGGATCGAGTCGGGTTC 59.617 60.000 13.54 7.52 42.67 3.62
1428 1448 2.542211 GAAAACGAAGCGGGGGCATG 62.542 60.000 0.00 0.00 0.00 4.06
1436 1456 2.394708 TGACTGAGAGAAAACGAAGCG 58.605 47.619 0.00 0.00 0.00 4.68
1477 1497 5.815740 ACCGAGTATCATCAATGTACCAAAC 59.184 40.000 0.00 0.00 33.17 2.93
1480 1500 4.202212 CCACCGAGTATCATCAATGTACCA 60.202 45.833 0.00 0.00 33.17 3.25
1528 1548 3.988379 AGTTGCGATTGATGTGTTGTT 57.012 38.095 0.00 0.00 0.00 2.83
1529 1549 3.550639 CCAAGTTGCGATTGATGTGTTGT 60.551 43.478 0.00 0.00 0.00 3.32
1531 1551 2.884012 TCCAAGTTGCGATTGATGTGTT 59.116 40.909 0.00 0.00 0.00 3.32
1532 1552 2.503331 TCCAAGTTGCGATTGATGTGT 58.497 42.857 0.00 0.00 0.00 3.72
1533 1553 3.236816 GTTCCAAGTTGCGATTGATGTG 58.763 45.455 0.00 0.00 0.00 3.21
1534 1554 2.884012 TGTTCCAAGTTGCGATTGATGT 59.116 40.909 0.00 0.00 0.00 3.06
1536 1556 4.487948 CATTGTTCCAAGTTGCGATTGAT 58.512 39.130 0.00 0.00 0.00 2.57
1537 1557 3.305267 CCATTGTTCCAAGTTGCGATTGA 60.305 43.478 0.00 0.00 0.00 2.57
1538 1558 2.988493 CCATTGTTCCAAGTTGCGATTG 59.012 45.455 0.00 0.00 0.00 2.67
1539 1559 2.890311 TCCATTGTTCCAAGTTGCGATT 59.110 40.909 0.00 0.00 0.00 3.34
1541 1561 1.879380 CTCCATTGTTCCAAGTTGCGA 59.121 47.619 0.00 0.00 0.00 5.10
1542 1562 1.879380 TCTCCATTGTTCCAAGTTGCG 59.121 47.619 0.00 0.00 0.00 4.85
1543 1563 5.585390 CATATCTCCATTGTTCCAAGTTGC 58.415 41.667 0.00 0.00 0.00 4.17
1544 1564 5.125900 TGCATATCTCCATTGTTCCAAGTTG 59.874 40.000 0.00 0.00 0.00 3.16
1545 1565 5.126061 GTGCATATCTCCATTGTTCCAAGTT 59.874 40.000 0.00 0.00 0.00 2.66
1547 1567 4.641541 TGTGCATATCTCCATTGTTCCAAG 59.358 41.667 0.00 0.00 0.00 3.61
1548 1568 4.398988 GTGTGCATATCTCCATTGTTCCAA 59.601 41.667 0.00 0.00 0.00 3.53
1549 1569 3.947196 GTGTGCATATCTCCATTGTTCCA 59.053 43.478 0.00 0.00 0.00 3.53
1550 1570 3.947196 TGTGTGCATATCTCCATTGTTCC 59.053 43.478 0.00 0.00 0.00 3.62
1551 1571 4.637534 ACTGTGTGCATATCTCCATTGTTC 59.362 41.667 0.00 0.00 0.00 3.18
1557 1577 2.169144 CTGGACTGTGTGCATATCTCCA 59.831 50.000 0.00 0.00 32.66 3.86
1608 1630 4.630069 AGCACAGTGATAACGACATAAACC 59.370 41.667 4.15 0.00 0.00 3.27
1609 1631 5.120208 ACAGCACAGTGATAACGACATAAAC 59.880 40.000 4.15 0.00 0.00 2.01
1779 1810 2.359531 GAGAATGGTCAGACCTAGTCCG 59.640 54.545 20.82 0.00 39.58 4.79
1783 1814 3.099905 TGGTGAGAATGGTCAGACCTAG 58.900 50.000 20.82 0.00 39.58 3.02
1792 1823 1.768275 TGTGTGACTGGTGAGAATGGT 59.232 47.619 0.00 0.00 0.00 3.55
1829 1864 2.411904 GGTGAAGAAGCTCTGTCACAG 58.588 52.381 19.43 0.00 36.82 3.66
1831 1866 1.346068 AGGGTGAAGAAGCTCTGTCAC 59.654 52.381 12.79 12.79 35.62 3.67
1858 1893 4.122776 GTCGTCACAGAATCCATGCTTAT 58.877 43.478 0.00 0.00 0.00 1.73
1868 1903 0.389948 GGAAGGCGTCGTCACAGAAT 60.390 55.000 5.11 0.00 0.00 2.40
2108 2143 2.126618 CTCACGTCGCGTAAGGCA 60.127 61.111 5.77 0.00 43.84 4.75
2282 2317 1.597027 CGCCAAGGTGTCCGACTTT 60.597 57.895 0.00 0.00 0.00 2.66


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.