>input_sequence_82805
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---------------------------------------------------ATGCATCCGCTCGTGGGGGCGCTGCTGGT
GAGTGCCGGGGAGCGGTGGTGGTGGCCGTGCTGGGGCCCGGCGGCGCGCCACGCCGCGGCGTGGGCCGGCACGCTGGCGC
TGGCCGTGTCGGTGGCGTCGTTCGCGCCGGAGGCCGCGTTCGTGTGGGCGCTGGCCAGCGGCGGGTGCGCGGCCGGGTCG
GTGCGCGTGCCGCTCGACGGCGGCGGGGACCACGTCTGCGTGCCGGCGAGGATGGCCGGCCGGACCTGCGCCGACATCAT
CGTGCCGCCGGTGTTCGCGGCGCTCTCCGTCGGCGCCTCGGCGTGCTTCGTCCGGACGATCGCCATCGGCCGCCGCCACG
GCTACTAG------------------------------------------------------------------------
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>chr5B_1_TraesCS5B01G089900
CGGCTGATCTTGGTATGGTCCGGGTGGAGCTCGAGACGGACTCACAACTACTGGCGGAAGCCCTGGATATGCGCAAGGTA
GACTCTTCGGCGTATGCGGCCGCCATAGAGGATATGAAATATCAACTCAAGCTATGGTTCTCTCAATTTTCCATTTCTGT
TTATAGAAGTAGTGCAAACTCTGTGGCACATGAGCTTGCCAACATTGGCCGCCAATGTGAGCCTAACCACTGTCTGGAGT
GGGAGTCTGATGTACCTGCCCAAGTGGATGAATGTGTTGTGGGCGATATGCCTCACCACAGCTAAGTAATGAAGCTATGC
TTTCCTAAACAAACAAAAAAAAACACGAGACTAAGATAGCCCGGGCGCAGGGCAATTTACGCACCCAACACGTCTCCTTG
GACCGATCTTTCGTTTCAACATGGCCGGTTTAGAAACCCCGCGGCCCCTCTTCCCTCCTCCGCTCACCTACTCAACGGCC
ACGTATGCGTAACGTATAAGGGCATGTACAATGGTTGATAAGATAGTCTTATCTTAAGTCTTGCATGTGATTTAGAGATG
ACAAAAAAAATTTATCTACAATGAATCATATCTTAGCTTTATTTTCAATAATTAGTAATTCCTAAAAATGTGGTAAGACA
TATTATGCTAAGAGATCATCTCTTGTCTTCTTTTAAATAAGAGAAGACAAGCCTTTTTTTATGAGTTCTCTCTTCTTCAC
CTCTTCATCTATCCTACGTGACATTGCTAAGATAGAATCATTCTACATGGCCTAACCTCTCCATTCTATCTGCCCCTCC-
----TCCGCCCCCCACGACGCGCGACGCAGCCGCTTCACTCGCGCTCCGCTCTGCGTACATAACCACCACCCCGCGCGCC
GCACGGCCGGCTCGCAACTCGCAACGCCAGTTGCGCGGCGTCTCGAA------CCCGACTCGATCCTCTGCAGGGAGGCC
AAGAAAATCAAGGTCGAGCCGAGCGAGCGATCTCGAGCCCTCCCTCGACCGATGCATCCGCTCGTGGGGGCGCTGCTGGT
GAGTGCCGGGGAGCGGTGGTGGTGGCCGTGCTGGGGCCCGGCGGCGCGCCACGCCGCGGCGTGGGCCGGCACGCTGGCGC
TGGCCGTGTCGGTGGCGTCGTTCGCGCCGGAGGCCGCGTTCGTGTGGGCGCTGGCCAGCGGCGGGTGCGCGGCCGGGTCG
GTGCGCGTGCCGCTCGACGGCGGCGGGGACCACGTCTGCGTGCCGGCGAGGATGGCCGGCCGGACCTGCGCCGACATCAT
CGTGCCGCCGGTGTTCGCGGCGCTCTCCGTCGGCGCCTCGGCGTGCTTCGTCCGGACGATCGCCATCGGCCGCCGCCACG
GCTACTAGCCATCATTGGAGCAAGC--------CCGTGTCCTTCCCCTCTGCTGTGCGACGCACGCCTCCCGCTTCTGAA
CACGTATCATGCCCCCGCTTCGTTTTCTCTCAGTCATATAGATGATGTTCATTTTTGTTTGGTACATTGATGATACTCGG
TGGTTAATCTGAAATATTCTCACAAGAAACAACACATCAATCGCAACTTGGAACAATGGAGATATGCACACAGTCCAGAT
GTCCAATACATGTTC--ATCATAGAAAAAGGTTT--------ATGTCGTTATCACTGTGCTGTGCATTTGTCAAACCTGC
TTTACTAATCCTAATACTAGTAAGTAAGCTACCACGCAATGTACATCTCACTCAAACTGAGCAGTACATGGTTGGTGATC
TAATCAAGAATCTCCAACCCCATCGCCTCCAAATCCATCCAG-AAATTACGGACTAGGTCTGAC----CATTCTCACCAG
TCACACATATCCACAACAGAGTACTGTGACAGAGCTTCTTCACCCTCACCTAATAAGCATGGATTCTGTGACGACGCCTT
CCTGATCCCGTCAAGCTCCTCGGCGACCTCTCGCATGGAGGGCCTCCTCTCGCCGGACATCTCCAGGCACAGCTTCGCGA
GCTTGGCCACCTGCTCCAGCGTCTCCGCCCTCACCTCGCTCTTGATCCGCGCGTCCAGCAGGCCGTCCAGCCTGCCGTCC
CTCGCCGCCGTGAGGAAGCTCGCGACGACGCTCTTCTCGTCGTCGGGGGCGGCGAGGTTCAGTGCCTTACGCGACGTGAG
CAGCTCCAGGAGCACCACGCCGAAGCTGTACACGTCGCTCTTCTCCGTCAGCCGGCACGTCTGCATGTACTCCGGGTCCA
GGTACCCGCACGTCCCCTGCACGAACGTCACCAGGTGCGCCTCGTCCGTCGGCGCCGGCGCCAGCGACGACGCCCCAAAG
TCGGACACCTTGGCGCCGTAGTTCTCGTCGAGGAGGATGTTGGGGGACTTGACGTCGCCGTGGATGATCGG
>chr5D_328
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-------AAGAAAAAAAGAAAAACACGACACCTAGATAGCGCGGGCGCAGGGCAATTTACGCACCCAACACGTCTCCTTG
GACCGACCTCTCGTTTCAACAAGGCCGGTTTAGAAACCCCGCGGCCCCTCTTC---CCTCCGCTCACCTACTCAACGGCC
ACGTATGCGTAACGTA----------------------------------------------------------------
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----------------------------------------------------TAACCTCTCCATTCTATCTGCCCCTACC
TCCGTCCGTCCCCCACGACGCGCGACGCAGCCGCTTCACTCGC-CTCCGCGCTGCGTACATAACCACCACCCCGCGCGCC
GCACGGACGGCTCGCAACTCGCAACGCCAGTTGCGCGGCGGCTCCAA------CTCGACTCGATCCTCTGCAGGGAGGCC
AAGAAAATCAAGGTCGAGCCGAGCGAGCGATCTCGAGCCCTCCCTCGACCGATGCATCCGCTCGTGGGGGCGCTGCTGGT
GGGGGCCGGGGAGCGGTGGTGGTGGCCGTGCTGGGGCCCGGCGGCGCGCCACGCCGCGGCGTGGGCCGGCGCGCTGGCGC
TGGCCGTGTCGGTGGCGTCGTTCGCGCCGGAGGCCGCGTTCGTGTGGGCGCTGGCCGGCGGCGGGTGCGCGGCCGGGTCG
GTGCGCGTGCCGCTCGACGGCGGAGGGGACCACGTCTGCGTGCCGGCGAGGATGGCCGGCCGGACCTGCGCCGACATCAT
CGTGCCGCCGGCATTCGCGGCACTCTCCGTCGGTGCCTCCGCGTGCTTCGTCCGGGCGATCGCCGTCGGCCGCCGCCACG
GCTATTAGTCGTCATTGGAGCAAGCCCGTGTGGCCGTGTCCTTCCCCTCTGCTGTGCGACGCACGCCTCCCGCTTCTGAA
CACGTATTATGCCCCGGCTTCGTTTTCTCTCGGTC--ATAGATGATGTTCATTTTTTTGGAC-ACATTGATGATACTCGG
TGGTTAATCTGAAATATTCTCACAAGA------------------------AACAACGGAGATATGCACACAGTCCAGT-
----------TGTTC--ATCATAGAAAAAAAATT--------ATGTCGTTATCACTGTGCTGTGCATTTGTCAAACCTGC
TTTACTAATCCTAATACTAGTAAGTAAGCTACCACGCAATGTACATCTCAGTCAAACTGAGCAGTGCATGTTTGGTGATC
TAATCAAGAATCTCCAACCCCATCGCGTCCAAATCCATCCAGCAAATTAAGGAGTAGGTCTGTCTGATCATTCTCACCAG
TCACACATATCCACAACAGAGTAGCCTGACAGAGCTTCTTCACCCTCACCTAGTAAGCATGGGTTCTGTGACGACGCCTT
CCTGATCCCGTCAAGCTCCTCGGCGACCTCTCGCATGGAGGGCCTTCTCTCGCCGGACATCTCCAGGCACAGCTTCGCGA
GCTTGGCCACCTGCTCCAGCGTCTCCGCCCTCACCTCGCTCTTGATCCGCGCGTCCAGCAGGCCGTCCAGCCTGCCGTCC
CTCGCCGCCGTCAGGAAGCTCGCGACGACGCTCTTCTCGTCGTCGGGGGCGGCGAGGTTCAGCGCCTTCCGCGACGTGAG
CAGCTCCAGGAGCACCACGCCGAAGCTGTACACGTCGCTCTTCTCCGTCAGCCGGCACGTCTGCATGTACTCCGGGTCCA
GGTACCCGCACGTCCCCTGCACGAACGTCACCAGGTGCGCCTCGTCCGTCGGCGCCGGTGCCAGCGACGACGCCCCGAAG
TCGGACACCTTGGCGCCGTAGTTCTCGTCGAGGAGGATGTTGGGGGACTTGACGTCGCCGTGGATGATCGG
>chr5A_773
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----------------------------------------------------TAACCTCTCCATTCTATCTGCCCCTCC-
----TCCGTCCCCCACGACGCGCGACGCAGCTGCTTCACTCGC-CTCCGCTCTGCGTACATAACCACCACCCCGCGCGCC
GCACGGCCGGCTCGCAACTCGCAACGCCAGTTGCGCGGCGTCTCAAACTCAAACCCGACTCGATCCTCTGCAGGGTGGCC
AAGAAAATCAAGGTCGAGCCGAGCGAGCGATCTCGAGCCCTCCCTCGACCGATGCATCCGCTCGTGGGGGCGCTGCTGGT
GGGGGCCGGGGAGCGGTGGTGGTGGCCGTGCTGGGGCCCGGCGGCGCGCCACGCCGCGGCGTGGGCCGGCGCGCTGGCGC
TGGCCGTGTCGGTGGCGTCGTTCGCGCCGGAGGCCGCGTTCGTGTGGGCGCTGGCCAGCGGCGGGTGCGCGGCCGGGTCG
GTGCGCGTGCCGCTCGACGGCGGCGGCGACCACGTCTGCGTGCCGGCGAGGATGGCCGGCCGGACCTGCGCCGACATCAT
CGTGCCGCCGGTGTTCGCGGCGCTCTCCGTCGGCGCCTCCGCGTGCTTCGTCCGGACGATCGCCATCGGCCGCCGCCACG
GCTACTAGCCATCATTGGAGCAAGC--------CCGTGTCCTTCCCCTCTGCTGTGCGACGCACGCCTCC-GCTTCTGAA
CACGTATTATGTCCCGGCTTCATTTTCTCTCAGTC--ATAGATGATGTTCATTTTTTTTGGGTACATTGATGATACTCGG
TGGTTAATCTGAAATATAGTCACAATACCCCGATCCCTCAATCGGATC-------AAGGAAATGCGCACAAAATGCAATT
ATCCAGGGCATGTTCTTATCATACAGAAAAATGTTCATGTCGATGTCGTTATCACTGTGCTGTGCATTTGTCAAACCTGC
TTTACTAATCCTAATACTAGTAAGTAAGCTACCACGCAATGTACATCTCACTCAAACTGAGCAGTACATGGTTGGTGATC
TAATCAAGAATCTCCAACCCCATCGCCTCCAAATCCATCCAGCG-ATTAAGGAGTAGGTC----TGATCATTCTCACCAG
TCACACATATCCACAACAGAGTAGTCTGACAGAGCTTCTTCACCCTCACCTAGTAAGCATGGGTTCTGTGAGGACGCCTT
CCTGATCCCGTCAAGCTCCTCGGCGACCTCTCGCATGGAGGGCCTCCTCTCGCCGGACATCTCCAGGCACAGCTTCGCGA
GCTTGGCCACCCGCTCCAGCGTCTCCGCCCCCACCTCGCTCTTGATCCGCGCGTCCAGCAGGCCGTCCAGCCTGCCGTCC
CTCGCCGCCGTGAGGAAGCTCGCGACGACGCTCTTCTCGTCGTCGGGGGCGGCGAGGTTCAGCGCCTTCCGCGACGTGAG
CAGCTCCAGGAGCACCACGCCGAAGCTGTACACGTCGCTCTTCTCCGTCAGCCGGCACGTCTGCATGTACTCCGGGTCCA
GGTACCCGCACGTCCCCTGCACGAACGTCACCAGGTGCGCCTCGTCCGTCGGCGCCGGCGCCAGCGACGACGCCCCGAAG
TCGGACACCTTGGCGCCGTAGTTCTCGTCGAGGAGGATGTTGGGGGACTTGACGTCGCCGTGGATGATCGG
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSS--S---S---S----------S--SS-------S---------------------------------------
------S--S-----------S-------------------------------SSS------------------------
----------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------------------------
--------S----------------------------------S------------------------------------
--------------------------------------------S-----------------------------------
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-S-S------------------------------------------------------------------S---------
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---------------------------------------S----------------------------------------
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-------S-------S-------------------SS-------------------S--S--------------------
---------------------------SS-SSSS-SSSS-SSSSS-SSSSS-----S---------------------S-
S----SSS---------------------SS-------------------------------------------------
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-------------------------------------------------S---S--------S-----------------
-----------------------S-S--------------------------S---------S-----------------
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--------------------------------------------------------------S-----S-----------
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>forward_303
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-------------------------------------------CGATATGCCTCACCACAGCT-----------------
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>reverse_1903
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--------------------------------------------------------------ATTCTGTGACGACGCCTT
CC------------------------------------------------------------------------------
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