Multiple sequence alignment - TraesCS5B01G089700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G089700 chr5B 100.000 5009 0 0 1 5009 115393950 115398958 0.000000e+00 9250.0
1 TraesCS5B01G089700 chr5B 97.134 314 9 0 4172 4485 621341097 621340784 9.550000e-147 531.0
2 TraesCS5B01G089700 chr5B 97.712 306 6 1 4173 4477 583202786 583202481 4.440000e-145 525.0
3 TraesCS5B01G089700 chr5A 93.649 1858 103 7 1666 3520 109951246 109953091 0.000000e+00 2763.0
4 TraesCS5B01G089700 chr5A 88.858 718 27 11 791 1474 109950341 109951039 0.000000e+00 833.0
5 TraesCS5B01G089700 chr5A 91.800 561 25 7 3524 4081 109953374 109953916 0.000000e+00 761.0
6 TraesCS5B01G089700 chr5A 84.157 688 70 17 1 669 109948064 109948731 9.150000e-177 630.0
7 TraesCS5B01G089700 chr5A 87.860 486 32 11 4536 4995 109953972 109954456 3.410000e-151 545.0
8 TraesCS5B01G089700 chr5A 92.453 53 4 0 664 716 109948775 109948827 5.380000e-10 76.8
9 TraesCS5B01G089700 chr5D 90.682 1524 103 20 1470 2987 106660879 106659389 0.000000e+00 1991.0
10 TraesCS5B01G089700 chr5D 90.423 710 23 11 810 1474 106661635 106660926 0.000000e+00 893.0
11 TraesCS5B01G089700 chr5D 89.077 531 31 5 3006 3514 106659308 106658783 7.070000e-178 634.0
12 TraesCS5B01G089700 chr5D 95.526 380 16 1 3689 4067 106658634 106658255 1.540000e-169 606.0
13 TraesCS5B01G089700 chr5D 84.079 559 39 16 177 716 106681877 106681350 1.250000e-135 494.0
14 TraesCS5B01G089700 chr5D 89.098 266 20 4 4538 4797 106658224 106657962 6.260000e-84 322.0
15 TraesCS5B01G089700 chr5D 93.548 93 6 0 4748 4840 106657956 106657864 6.760000e-29 139.0
16 TraesCS5B01G089700 chr5D 87.097 93 12 0 4903 4995 106625313 106625221 6.860000e-19 106.0
17 TraesCS5B01G089700 chr5D 95.312 64 3 0 3531 3594 106658697 106658634 8.870000e-18 102.0
18 TraesCS5B01G089700 chr2A 98.058 309 6 0 4169 4477 743112615 743112923 5.710000e-149 538.0
19 TraesCS5B01G089700 chr2A 97.727 44 1 0 4080 4123 42790591 42790548 5.380000e-10 76.8
20 TraesCS5B01G089700 chr2A 97.727 44 1 0 4080 4123 42838918 42838875 5.380000e-10 76.8
21 TraesCS5B01G089700 chr2A 97.727 44 1 0 4080 4123 42875832 42875789 5.380000e-10 76.8
22 TraesCS5B01G089700 chr2A 97.727 44 1 0 4080 4123 42932210 42932167 5.380000e-10 76.8
23 TraesCS5B01G089700 chr2A 97.727 44 1 0 4080 4123 42962226 42962183 5.380000e-10 76.8
24 TraesCS5B01G089700 chr2A 97.727 44 1 0 4080 4123 43049597 43049554 5.380000e-10 76.8
25 TraesCS5B01G089700 chr2B 97.059 306 9 0 4172 4477 211622080 211622385 2.670000e-142 516.0
26 TraesCS5B01G089700 chr4B 95.541 314 11 3 4166 4477 12131343 12131655 2.690000e-137 499.0
27 TraesCS5B01G089700 chr7B 96.066 305 12 0 4172 4476 745763909 745763605 9.680000e-137 497.0
28 TraesCS5B01G089700 chr6A 94.231 312 18 0 4168 4479 524364316 524364627 1.260000e-130 477.0
29 TraesCS5B01G089700 chr4D 93.949 314 19 0 4166 4479 486181399 486181712 4.540000e-130 475.0
30 TraesCS5B01G089700 chr4D 93.016 315 22 0 4172 4486 221433903 221433589 1.270000e-125 460.0
31 TraesCS5B01G089700 chr7A 97.778 45 1 0 4080 4124 641455484 641455528 1.500000e-10 78.7
32 TraesCS5B01G089700 chr2D 97.727 44 1 0 4080 4123 37959912 37959869 5.380000e-10 76.8
33 TraesCS5B01G089700 chr2D 97.727 44 1 0 4080 4123 37986563 37986520 5.380000e-10 76.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G089700 chr5B 115393950 115398958 5008 False 9250.000000 9250 100.000000 1 5009 1 chr5B.!!$F1 5008
1 TraesCS5B01G089700 chr5A 109948064 109954456 6392 False 934.800000 2763 89.796167 1 4995 6 chr5A.!!$F1 4994
2 TraesCS5B01G089700 chr5D 106657864 106661635 3771 True 669.571429 1991 91.952286 810 4840 7 chr5D.!!$R3 4030
3 TraesCS5B01G089700 chr5D 106681350 106681877 527 True 494.000000 494 84.079000 177 716 1 chr5D.!!$R2 539

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
103 110 0.622665 AGGCTCTCATTTGTGGAGGG 59.377 55.0 0.0 0.0 35.92 4.30 F
1702 3310 0.105709 TGAGACCTCCACAGACCACA 60.106 55.0 0.0 0.0 0.00 4.17 F
1703 3311 0.605589 GAGACCTCCACAGACCACAG 59.394 60.0 0.0 0.0 0.00 3.66 F
2954 4566 0.532862 CACGTGAGCAACAGGAGGTT 60.533 55.0 10.9 0.0 41.47 3.50 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1840 3448 0.036022 GGAGGAGCTATGATGCCCAC 59.964 60.0 0.0 0.00 0.00 4.61 R
2747 4357 0.107703 GTTGGCCTCGATCATGGTCA 60.108 55.0 6.8 4.39 36.01 4.02 R
3164 4860 0.674895 CAGCCTGTACAACTCCTGCC 60.675 60.0 0.0 0.00 0.00 4.85 R
4121 6098 0.036952 CATCCGTGGCTCAACAGAGT 60.037 55.0 0.0 0.00 0.00 3.24 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.926058 ATCCTAACCTTTACCATGCGT 57.074 42.857 0.00 0.00 0.00 5.24
30 31 4.527564 CTTTACCATGCGTAAATGCTAGC 58.472 43.478 8.10 8.10 44.12 3.42
36 37 4.266029 CCATGCGTAAATGCTAGCAAAAAG 59.734 41.667 23.54 12.93 43.19 2.27
39 40 4.915085 TGCGTAAATGCTAGCAAAAAGAAC 59.085 37.500 23.54 12.73 36.60 3.01
46 48 8.524870 AAATGCTAGCAAAAAGAACACTAATG 57.475 30.769 23.54 0.00 0.00 1.90
50 52 5.473066 AGCAAAAAGAACACTAATGGCAT 57.527 34.783 0.00 0.00 0.00 4.40
98 105 7.592938 TGTGTAATTTTAGGCTCTCATTTGTG 58.407 34.615 0.00 0.00 0.00 3.33
100 107 6.945435 TGTAATTTTAGGCTCTCATTTGTGGA 59.055 34.615 0.00 0.00 0.00 4.02
102 109 3.634397 TTAGGCTCTCATTTGTGGAGG 57.366 47.619 0.00 0.00 33.18 4.30
103 110 0.622665 AGGCTCTCATTTGTGGAGGG 59.377 55.000 0.00 0.00 35.92 4.30
108 115 3.573967 GCTCTCATTTGTGGAGGGAAAAA 59.426 43.478 0.00 0.00 34.71 1.94
144 151 5.394773 GGGTTAAGCTTTGTTTCTGAAACCA 60.395 40.000 25.66 15.39 40.67 3.67
193 200 2.187685 CATGCTGGCGGTAGCTGA 59.812 61.111 0.00 0.00 44.01 4.26
210 217 0.909610 TGATCCACCTCCACACCTCC 60.910 60.000 0.00 0.00 0.00 4.30
266 286 4.153957 CCTGGGGAAGGTGTAGCT 57.846 61.111 0.00 0.00 41.74 3.32
278 298 0.919710 GTGTAGCTCCATCCCCCTTT 59.080 55.000 0.00 0.00 0.00 3.11
281 301 1.847088 GTAGCTCCATCCCCCTTTCTT 59.153 52.381 0.00 0.00 0.00 2.52
291 311 1.425448 CCCCCTTTCTTGGTTCTGACT 59.575 52.381 0.00 0.00 0.00 3.41
327 347 4.496360 CCTCATCTCCGAATCATGATCTG 58.504 47.826 9.06 4.43 0.00 2.90
388 408 0.744281 TGCTCGGATTGTCGATGCTA 59.256 50.000 0.00 0.00 38.55 3.49
393 413 1.536922 CGGATTGTCGATGCTAGCAGT 60.537 52.381 23.89 11.26 0.00 4.40
462 482 1.134401 CCTTTATCTGCGCCCTCTTCA 60.134 52.381 4.18 0.00 0.00 3.02
486 506 4.883006 AGCTTAGAGGAAAGTCTAGGTACG 59.117 45.833 0.00 0.00 30.59 3.67
491 511 2.751806 AGGAAAGTCTAGGTACGGTTCG 59.248 50.000 0.00 0.00 0.00 3.95
492 512 2.749621 GGAAAGTCTAGGTACGGTTCGA 59.250 50.000 0.00 0.00 0.00 3.71
493 513 3.191371 GGAAAGTCTAGGTACGGTTCGAA 59.809 47.826 0.00 0.00 0.00 3.71
494 514 4.410448 GAAAGTCTAGGTACGGTTCGAAG 58.590 47.826 0.00 0.00 0.00 3.79
538 558 1.684983 ACGTCGTTTCCCTTCTGAAGA 59.315 47.619 18.68 0.00 0.00 2.87
541 561 1.684983 TCGTTTCCCTTCTGAAGACGT 59.315 47.619 18.68 0.00 34.00 4.34
600 620 4.068599 TGTTTTATCATCTGTTCGTGCCA 58.931 39.130 0.00 0.00 0.00 4.92
617 637 3.181526 CAAGCATCCCTTGTCCCTC 57.818 57.895 0.00 0.00 44.74 4.30
618 638 0.622665 CAAGCATCCCTTGTCCCTCT 59.377 55.000 0.00 0.00 44.74 3.69
619 639 1.839994 CAAGCATCCCTTGTCCCTCTA 59.160 52.381 0.00 0.00 44.74 2.43
721 790 3.840831 GCCTCCAAGCCCATTTTTC 57.159 52.632 0.00 0.00 0.00 2.29
722 791 1.269958 GCCTCCAAGCCCATTTTTCT 58.730 50.000 0.00 0.00 0.00 2.52
726 795 1.892474 TCCAAGCCCATTTTTCTTCGG 59.108 47.619 0.00 0.00 0.00 4.30
727 796 1.618343 CCAAGCCCATTTTTCTTCGGT 59.382 47.619 0.00 0.00 0.00 4.69
728 797 2.352715 CCAAGCCCATTTTTCTTCGGTC 60.353 50.000 0.00 0.00 0.00 4.79
729 798 1.165270 AGCCCATTTTTCTTCGGTCG 58.835 50.000 0.00 0.00 0.00 4.79
731 800 1.135774 GCCCATTTTTCTTCGGTCGTC 60.136 52.381 0.00 0.00 0.00 4.20
732 801 2.147958 CCCATTTTTCTTCGGTCGTCA 58.852 47.619 0.00 0.00 0.00 4.35
740 816 3.217599 TCTTCGGTCGTCAAAGATCTG 57.782 47.619 0.00 0.00 0.00 2.90
756 832 2.666190 TGCTCGTCTTGGCACAGC 60.666 61.111 0.00 0.00 42.39 4.40
771 2185 2.799978 GCACAGCCAAAACATGTTTACC 59.200 45.455 23.53 14.27 31.63 2.85
803 2310 5.655893 AAAAAGGAAAAATCATGTGCACG 57.344 34.783 13.13 0.00 0.00 5.34
914 2428 4.437390 GGGCAACGACTCACATTAATCAAG 60.437 45.833 0.00 0.00 37.60 3.02
936 2452 3.929955 TGATGATGTGTAGGCATGGAA 57.070 42.857 0.00 0.00 0.00 3.53
985 2502 2.588877 GTCACCGCCCGATCCATG 60.589 66.667 0.00 0.00 0.00 3.66
1013 2531 3.769844 ACCTGTACGATGAGGAAGATGTT 59.230 43.478 4.07 0.00 33.16 2.71
1016 2534 5.452496 CCTGTACGATGAGGAAGATGTTCAT 60.452 44.000 4.83 0.00 33.93 2.57
1283 2801 5.250235 GACATCATCGGTAAGTCTGAAGA 57.750 43.478 0.00 0.00 34.35 2.87
1379 2904 6.726490 AGCTAATTTAGTCTGATCCGGTTA 57.274 37.500 0.00 0.00 0.00 2.85
1416 2968 2.124277 AGCTGCTTGAGATGATGCAA 57.876 45.000 0.00 0.00 34.90 4.08
1474 3026 3.068024 TCGCTCAAATCTTTGCCAAAACT 59.932 39.130 0.00 0.00 38.05 2.66
1475 3027 3.803778 CGCTCAAATCTTTGCCAAAACTT 59.196 39.130 0.00 0.00 38.05 2.66
1478 3030 5.752955 GCTCAAATCTTTGCCAAAACTTACA 59.247 36.000 0.00 0.00 38.05 2.41
1479 3031 6.074142 GCTCAAATCTTTGCCAAAACTTACAG 60.074 38.462 0.00 0.00 38.05 2.74
1480 3032 6.279882 TCAAATCTTTGCCAAAACTTACAGG 58.720 36.000 0.00 0.00 38.05 4.00
1489 3097 6.744112 TGCCAAAACTTACAGGAAATTACAG 58.256 36.000 0.00 0.00 0.00 2.74
1520 3128 6.068010 CCTCATATAAAGTGGTGGGCAATAA 58.932 40.000 0.00 0.00 0.00 1.40
1522 3130 7.255590 CCTCATATAAAGTGGTGGGCAATAAAG 60.256 40.741 0.00 0.00 0.00 1.85
1531 3139 5.464057 GTGGTGGGCAATAAAGTTTACAAAC 59.536 40.000 0.00 0.00 39.17 2.93
1533 3141 5.464057 GGTGGGCAATAAAGTTTACAAACAC 59.536 40.000 7.53 4.53 41.30 3.32
1537 3145 5.174216 GGCAATAAAGTTTACAAACACGTGG 59.826 40.000 21.57 4.47 41.30 4.94
1546 3154 8.025243 AGTTTACAAACACGTGGTCATATAAG 57.975 34.615 21.57 0.91 41.30 1.73
1548 3156 3.369756 ACAAACACGTGGTCATATAAGCG 59.630 43.478 21.57 0.00 0.00 4.68
1571 3179 6.128007 GCGGAAAATTACATATACATCCTGGG 60.128 42.308 0.00 0.00 0.00 4.45
1582 3190 1.963515 ACATCCTGGGTTCTTGCAAAC 59.036 47.619 0.00 0.00 0.00 2.93
1588 3196 1.064017 TGGGTTCTTGCAAACAGGACT 60.064 47.619 0.00 0.00 30.53 3.85
1590 3198 2.576615 GGTTCTTGCAAACAGGACTCT 58.423 47.619 0.00 0.00 30.53 3.24
1591 3199 2.291741 GGTTCTTGCAAACAGGACTCTG 59.708 50.000 0.00 0.00 46.10 3.35
1592 3200 3.206150 GTTCTTGCAAACAGGACTCTGA 58.794 45.455 0.00 0.00 43.49 3.27
1593 3201 3.558931 TCTTGCAAACAGGACTCTGAA 57.441 42.857 0.00 0.00 43.49 3.02
1605 3213 5.189342 ACAGGACTCTGAATGATCACAGATT 59.811 40.000 14.48 10.23 43.49 2.40
1627 3235 7.669722 AGATTAAAGATTGCAGTTGGGTCTAAA 59.330 33.333 0.00 0.00 0.00 1.85
1659 3267 1.078143 GGAACCAATCTCGCCAGCT 60.078 57.895 0.00 0.00 0.00 4.24
1697 3305 2.451490 GTCTGATGAGACCTCCACAGA 58.549 52.381 0.05 14.44 42.66 3.41
1698 3306 2.165437 GTCTGATGAGACCTCCACAGAC 59.835 54.545 23.49 23.49 44.89 3.51
1699 3307 1.480137 CTGATGAGACCTCCACAGACC 59.520 57.143 12.01 0.00 35.43 3.85
1700 3308 1.203174 TGATGAGACCTCCACAGACCA 60.203 52.381 0.00 0.00 0.00 4.02
1701 3309 1.205893 GATGAGACCTCCACAGACCAC 59.794 57.143 0.00 0.00 0.00 4.16
1702 3310 0.105709 TGAGACCTCCACAGACCACA 60.106 55.000 0.00 0.00 0.00 4.17
1703 3311 0.605589 GAGACCTCCACAGACCACAG 59.394 60.000 0.00 0.00 0.00 3.66
1840 3448 2.885644 CGCCCTTCGACCATCACG 60.886 66.667 0.00 0.00 41.67 4.35
1864 3472 2.620585 GGCATCATAGCTCCTCCAAAAC 59.379 50.000 0.00 0.00 34.17 2.43
1939 3548 7.654568 ACAAATGTGCATGATACTCATTATGG 58.345 34.615 0.00 0.00 34.28 2.74
1947 3556 7.161404 GCATGATACTCATTATGGTACTTCCA 58.839 38.462 0.00 0.00 42.19 3.53
1964 3573 6.936968 ACTTCCAACTACAAGAGGTCTAAT 57.063 37.500 0.00 0.00 0.00 1.73
1966 3575 8.068892 ACTTCCAACTACAAGAGGTCTAATAG 57.931 38.462 0.00 0.00 0.00 1.73
1973 3582 7.203910 ACTACAAGAGGTCTAATAGCAATTCG 58.796 38.462 0.00 0.00 0.00 3.34
2000 3609 2.857186 TGCTGCATACTGTCTTTCCA 57.143 45.000 0.00 0.00 0.00 3.53
2017 3626 7.865385 TGTCTTTCCAAATGTTGCAGTTATTAC 59.135 33.333 0.00 0.00 0.00 1.89
2130 3740 4.018409 GGGTTTGACATGAGCCCC 57.982 61.111 0.00 0.00 33.40 5.80
2158 3768 1.667830 CTCTCCTTGACGCCGCAAA 60.668 57.895 0.00 0.00 0.00 3.68
2162 3772 2.677003 CCTTGACGCCGCAAACGAT 61.677 57.895 0.00 0.00 43.93 3.73
2166 3776 2.358247 ACGCCGCAAACGATCCTT 60.358 55.556 0.00 0.00 43.93 3.36
2286 3896 3.579709 CTGCACTTACATCACTCGAGTT 58.420 45.455 17.26 3.70 0.00 3.01
2289 3899 4.217767 TGCACTTACATCACTCGAGTTACT 59.782 41.667 17.26 0.00 0.00 2.24
2293 3903 7.133513 CACTTACATCACTCGAGTTACTATCC 58.866 42.308 17.26 0.00 0.00 2.59
2294 3904 6.827251 ACTTACATCACTCGAGTTACTATCCA 59.173 38.462 17.26 0.00 0.00 3.41
2400 4010 1.150135 ACCCTGAAGTCTGAAGAGGGA 59.850 52.381 9.40 0.00 45.67 4.20
2403 4013 2.760092 CCTGAAGTCTGAAGAGGGAGAG 59.240 54.545 0.00 0.00 0.00 3.20
2446 4056 6.480320 GCTTGATTGACATTTACTATCTCGGT 59.520 38.462 0.00 0.00 0.00 4.69
2453 4063 6.816640 TGACATTTACTATCTCGGTTTCAAGG 59.183 38.462 0.00 0.00 0.00 3.61
2505 4115 6.473397 AAGCTTCTCTAACTTTGACATTCG 57.527 37.500 0.00 0.00 0.00 3.34
2547 4157 6.149633 GTGACTGGTCAAATGGAAACAATAC 58.850 40.000 4.92 0.00 42.71 1.89
2634 4244 7.156876 TCCTTATGAACCAAATTAACTGCAG 57.843 36.000 13.48 13.48 0.00 4.41
2670 4280 5.825151 TGTCCATGTTTTCAGTTACATGTGA 59.175 36.000 9.11 0.00 46.40 3.58
2728 4338 1.472376 CCCTCCGAGAACAGATCAAGC 60.472 57.143 0.00 0.00 0.00 4.01
2747 4357 1.392589 CTGTTTGCAGACACCAAGGT 58.607 50.000 5.87 0.00 45.28 3.50
2804 4414 1.741401 TCAATCGCTTGCTGTCCCG 60.741 57.895 0.00 0.00 32.11 5.14
2826 4436 2.050144 TCCCTATTCCTCATCAGCACC 58.950 52.381 0.00 0.00 0.00 5.01
2842 4453 3.093278 CCGCAGGCACGATTTCTC 58.907 61.111 1.20 0.00 46.14 2.87
2937 4548 3.059352 AGCACATCAAGGTAGGTTCAC 57.941 47.619 0.00 0.00 0.00 3.18
2954 4566 0.532862 CACGTGAGCAACAGGAGGTT 60.533 55.000 10.90 0.00 41.47 3.50
2973 4585 6.434340 GGAGGTTGAAATCTTGTCTGGTATTT 59.566 38.462 0.00 0.00 0.00 1.40
2997 4626 4.442612 CGGGAGATCTCAGTGACATTTGAT 60.443 45.833 23.85 0.00 0.00 2.57
3012 4687 9.132521 GTGACATTTGATTTCAGATAAACCTTG 57.867 33.333 0.00 0.00 0.00 3.61
3035 4710 5.053145 GTCAGTATGTCCATCTCAATGTCC 58.947 45.833 0.00 0.00 37.40 4.02
3083 4759 9.421806 TGTTTTCATAACATTTTGCCAGAATAG 57.578 29.630 0.00 0.00 0.00 1.73
3245 4941 2.753043 CTTGCCGGGCTGCAGAAT 60.753 61.111 20.43 0.00 43.21 2.40
3265 4961 2.601240 TTCCTTTGGACATGATGGCA 57.399 45.000 0.00 0.00 0.00 4.92
3443 5139 1.464997 CAACGGTTAGCTCTCTTTGCC 59.535 52.381 0.00 0.00 0.00 4.52
3447 5143 2.626840 GGTTAGCTCTCTTTGCCTGAG 58.373 52.381 0.00 0.00 0.00 3.35
3506 5203 4.137116 TCTATTACAAGGTCTGCGCAAT 57.863 40.909 13.05 0.37 0.00 3.56
3512 5209 2.100584 ACAAGGTCTGCGCAATCAAAAA 59.899 40.909 13.05 0.00 0.00 1.94
3520 5217 6.144402 GGTCTGCGCAATCAAAAATATATTGG 59.856 38.462 13.05 0.00 32.44 3.16
3522 5219 7.113965 GTCTGCGCAATCAAAAATATATTGGAG 59.886 37.037 13.05 0.00 32.44 3.86
3523 5220 6.804677 TGCGCAATCAAAAATATATTGGAGT 58.195 32.000 8.16 0.00 32.44 3.85
3525 5222 8.409371 TGCGCAATCAAAAATATATTGGAGTAA 58.591 29.630 8.16 0.00 32.44 2.24
3526 5223 9.243637 GCGCAATCAAAAATATATTGGAGTAAA 57.756 29.630 0.30 0.00 32.44 2.01
3572 5548 3.881688 TCTATACACGGTTACCTCTGAGC 59.118 47.826 0.00 0.00 0.00 4.26
3582 5558 1.153289 CCTCTGAGCCACCAATCGG 60.153 63.158 0.00 0.00 38.77 4.18
3607 5583 1.270625 TGGAACACTGGATCGTTCACC 60.271 52.381 11.68 0.00 42.67 4.02
3618 5594 1.530323 TCGTTCACCGATCTCTGTGA 58.470 50.000 5.73 5.73 41.60 3.58
3627 5603 4.058817 ACCGATCTCTGTGAAAGTCAAAC 58.941 43.478 0.00 0.00 0.00 2.93
3630 5606 4.747108 CGATCTCTGTGAAAGTCAAACTGT 59.253 41.667 0.00 0.00 0.00 3.55
3633 5609 6.422776 TCTCTGTGAAAGTCAAACTGTTTC 57.577 37.500 2.13 0.00 0.00 2.78
3657 5633 8.985315 TCATGTAATAATTCTTCTGCATTCCT 57.015 30.769 0.00 0.00 0.00 3.36
3668 5644 3.937062 CATTCCTAACGGCGCGCC 61.937 66.667 39.82 39.82 0.00 6.53
3694 5670 4.393990 CCGGTTGTTCTTACCTAATGAACC 59.606 45.833 0.00 0.00 39.24 3.62
3983 5960 1.135083 AGATAAACTGGAGCGTCCGTG 60.135 52.381 0.59 0.00 40.17 4.94
3991 5968 4.373116 AGCGTCCGTGCGTGGATT 62.373 61.111 0.00 0.00 40.91 3.01
3996 5973 1.071642 TCCGTGCGTGGATTTGGAA 59.928 52.632 0.00 0.00 31.53 3.53
4001 5978 0.537143 TGCGTGGATTTGGAAGCTGT 60.537 50.000 0.00 0.00 0.00 4.40
4037 6014 3.847671 AGGGAATTCGGAGGATTCTTC 57.152 47.619 0.00 0.00 0.00 2.87
4038 6015 2.439880 AGGGAATTCGGAGGATTCTTCC 59.560 50.000 4.75 4.75 42.96 3.46
4069 6046 3.615110 CGGTGCAGTACATCTTCAACTCT 60.615 47.826 0.00 0.00 0.00 3.24
4070 6047 3.681897 GGTGCAGTACATCTTCAACTCTG 59.318 47.826 0.00 0.00 0.00 3.35
4071 6048 4.310769 GTGCAGTACATCTTCAACTCTGT 58.689 43.478 0.00 0.00 0.00 3.41
4072 6049 4.752101 GTGCAGTACATCTTCAACTCTGTT 59.248 41.667 0.00 0.00 0.00 3.16
4073 6050 4.751600 TGCAGTACATCTTCAACTCTGTTG 59.248 41.667 4.25 4.25 0.00 3.33
4074 6051 4.991056 GCAGTACATCTTCAACTCTGTTGA 59.009 41.667 8.81 8.81 0.00 3.18
4075 6052 5.119898 GCAGTACATCTTCAACTCTGTTGAG 59.880 44.000 12.04 7.90 45.43 3.02
4076 6053 5.119898 CAGTACATCTTCAACTCTGTTGAGC 59.880 44.000 12.04 0.00 43.85 4.26
4077 6054 3.406764 ACATCTTCAACTCTGTTGAGCC 58.593 45.455 12.04 0.00 43.85 4.70
4078 6055 3.181451 ACATCTTCAACTCTGTTGAGCCA 60.181 43.478 12.04 2.97 43.85 4.75
4079 6056 3.777106 TCTTCAACTCTGTTGAGCCAT 57.223 42.857 12.04 0.00 43.85 4.40
4080 6057 3.668447 TCTTCAACTCTGTTGAGCCATC 58.332 45.455 12.04 0.00 43.85 3.51
4081 6058 3.071457 TCTTCAACTCTGTTGAGCCATCA 59.929 43.478 12.04 0.00 43.85 3.07
4082 6059 2.771089 TCAACTCTGTTGAGCCATCAC 58.229 47.619 8.81 0.00 43.85 3.06
4083 6060 1.808945 CAACTCTGTTGAGCCATCACC 59.191 52.381 4.60 0.00 43.85 4.02
4084 6061 1.059098 ACTCTGTTGAGCCATCACCA 58.941 50.000 0.00 0.00 43.85 4.17
4085 6062 1.002888 ACTCTGTTGAGCCATCACCAG 59.997 52.381 0.00 0.00 44.90 4.00
4086 6063 0.325933 TCTGTTGAGCCATCACCAGG 59.674 55.000 3.42 0.00 43.99 4.45
4093 6070 3.599584 CCATCACCAGGCAGCAAG 58.400 61.111 0.00 0.00 0.00 4.01
4094 6071 2.707849 CCATCACCAGGCAGCAAGC 61.708 63.158 0.00 0.00 44.65 4.01
4103 6080 2.880648 GCAGCAAGCCTGGTAAGC 59.119 61.111 0.00 0.00 42.03 3.09
4104 6081 1.676967 GCAGCAAGCCTGGTAAGCT 60.677 57.895 0.00 0.00 44.19 3.74
4105 6082 0.392998 GCAGCAAGCCTGGTAAGCTA 60.393 55.000 8.22 0.00 40.49 3.32
4106 6083 1.748591 GCAGCAAGCCTGGTAAGCTAT 60.749 52.381 8.22 0.00 40.49 2.97
4107 6084 2.216898 CAGCAAGCCTGGTAAGCTATC 58.783 52.381 8.22 0.00 40.49 2.08
4108 6085 2.122768 AGCAAGCCTGGTAAGCTATCT 58.877 47.619 7.04 0.00 40.49 1.98
4109 6086 2.103941 AGCAAGCCTGGTAAGCTATCTC 59.896 50.000 7.04 0.00 40.49 2.75
4110 6087 2.158900 GCAAGCCTGGTAAGCTATCTCA 60.159 50.000 0.00 0.00 40.49 3.27
4111 6088 3.682718 GCAAGCCTGGTAAGCTATCTCAA 60.683 47.826 0.00 0.00 40.49 3.02
4112 6089 4.517285 CAAGCCTGGTAAGCTATCTCAAA 58.483 43.478 0.00 0.00 40.49 2.69
4113 6090 4.844349 AGCCTGGTAAGCTATCTCAAAA 57.156 40.909 0.00 0.00 39.29 2.44
4114 6091 5.179452 AGCCTGGTAAGCTATCTCAAAAA 57.821 39.130 0.00 0.00 39.29 1.94
4135 6112 3.782889 ACAAAAACTCTGTTGAGCCAC 57.217 42.857 0.00 0.00 43.85 5.01
4136 6113 2.097466 ACAAAAACTCTGTTGAGCCACG 59.903 45.455 0.00 0.00 43.85 4.94
4153 6130 0.392998 ACGGATGTCATTCCTGCCAC 60.393 55.000 0.00 0.00 33.30 5.01
4154 6131 0.392863 CGGATGTCATTCCTGCCACA 60.393 55.000 0.00 0.00 33.30 4.17
4155 6132 1.386533 GGATGTCATTCCTGCCACAG 58.613 55.000 0.00 0.00 32.68 3.66
4156 6133 0.737219 GATGTCATTCCTGCCACAGC 59.263 55.000 0.00 0.00 40.48 4.40
4173 6150 4.414852 CACAGCAACCATCGAAATTAAGG 58.585 43.478 0.00 0.00 0.00 2.69
4174 6151 3.443681 ACAGCAACCATCGAAATTAAGGG 59.556 43.478 0.00 0.00 0.00 3.95
4175 6152 3.443681 CAGCAACCATCGAAATTAAGGGT 59.556 43.478 0.00 0.00 0.00 4.34
4176 6153 3.694566 AGCAACCATCGAAATTAAGGGTC 59.305 43.478 0.00 0.00 0.00 4.46
4177 6154 3.694566 GCAACCATCGAAATTAAGGGTCT 59.305 43.478 0.00 0.00 0.00 3.85
4178 6155 4.201920 GCAACCATCGAAATTAAGGGTCTC 60.202 45.833 0.00 0.00 0.00 3.36
4179 6156 5.186198 CAACCATCGAAATTAAGGGTCTCT 58.814 41.667 0.00 0.00 0.00 3.10
4180 6157 5.437191 ACCATCGAAATTAAGGGTCTCTT 57.563 39.130 0.00 0.00 39.40 2.85
4181 6158 5.816682 ACCATCGAAATTAAGGGTCTCTTT 58.183 37.500 0.00 0.00 36.93 2.52
4182 6159 5.648092 ACCATCGAAATTAAGGGTCTCTTTG 59.352 40.000 0.00 0.00 36.93 2.77
4184 6161 6.543831 CCATCGAAATTAAGGGTCTCTTTGAT 59.456 38.462 0.00 0.00 36.93 2.57
4187 6164 7.165485 TCGAAATTAAGGGTCTCTTTGATTCA 58.835 34.615 0.00 0.00 36.93 2.57
4188 6165 7.663905 TCGAAATTAAGGGTCTCTTTGATTCAA 59.336 33.333 0.00 0.00 36.93 2.69
4189 6166 8.296713 CGAAATTAAGGGTCTCTTTGATTCAAA 58.703 33.333 11.19 11.19 36.93 2.69
4202 6179 7.605410 CTTTGATTCAAAGGATTTTCATGGG 57.395 36.000 25.14 2.45 44.75 4.00
4203 6180 6.931790 TTGATTCAAAGGATTTTCATGGGA 57.068 33.333 0.00 0.00 35.03 4.37
4204 6181 7.499200 TTGATTCAAAGGATTTTCATGGGAT 57.501 32.000 0.00 0.00 35.03 3.85
4205 6182 7.499200 TGATTCAAAGGATTTTCATGGGATT 57.501 32.000 0.00 0.00 35.03 3.01
4206 6183 7.920227 TGATTCAAAGGATTTTCATGGGATTT 58.080 30.769 0.00 0.00 35.03 2.17
4207 6184 8.384718 TGATTCAAAGGATTTTCATGGGATTTT 58.615 29.630 0.00 0.00 35.03 1.82
4208 6185 9.234827 GATTCAAAGGATTTTCATGGGATTTTT 57.765 29.630 0.00 0.00 35.03 1.94
4209 6186 7.982761 TCAAAGGATTTTCATGGGATTTTTG 57.017 32.000 0.00 0.00 35.03 2.44
4210 6187 7.743749 TCAAAGGATTTTCATGGGATTTTTGA 58.256 30.769 0.00 0.00 35.03 2.69
4211 6188 8.216423 TCAAAGGATTTTCATGGGATTTTTGAA 58.784 29.630 0.00 0.00 35.03 2.69
4212 6189 8.508875 CAAAGGATTTTCATGGGATTTTTGAAG 58.491 33.333 0.00 0.00 35.03 3.02
4213 6190 6.714278 AGGATTTTCATGGGATTTTTGAAGG 58.286 36.000 0.00 0.00 31.54 3.46
4214 6191 6.501453 AGGATTTTCATGGGATTTTTGAAGGA 59.499 34.615 0.00 0.00 31.54 3.36
4215 6192 7.183293 AGGATTTTCATGGGATTTTTGAAGGAT 59.817 33.333 0.00 0.00 31.54 3.24
4216 6193 7.830697 GGATTTTCATGGGATTTTTGAAGGATT 59.169 33.333 0.00 0.00 31.54 3.01
4217 6194 9.889128 GATTTTCATGGGATTTTTGAAGGATTA 57.111 29.630 0.00 0.00 31.54 1.75
4249 6226 5.541098 GGAATTTTTCCTACATTCGTCGT 57.459 39.130 0.00 0.00 46.57 4.34
4250 6227 5.934921 GGAATTTTTCCTACATTCGTCGTT 58.065 37.500 0.00 0.00 46.57 3.85
4251 6228 6.376177 GGAATTTTTCCTACATTCGTCGTTT 58.624 36.000 0.00 0.00 46.57 3.60
4252 6229 6.304683 GGAATTTTTCCTACATTCGTCGTTTG 59.695 38.462 0.00 0.00 46.57 2.93
4253 6230 5.987777 TTTTTCCTACATTCGTCGTTTGA 57.012 34.783 4.59 0.00 0.00 2.69
4254 6231 6.548441 TTTTTCCTACATTCGTCGTTTGAT 57.452 33.333 4.59 0.00 0.00 2.57
4255 6232 6.548441 TTTTCCTACATTCGTCGTTTGATT 57.452 33.333 4.59 0.00 0.00 2.57
4256 6233 5.773239 TTCCTACATTCGTCGTTTGATTC 57.227 39.130 4.59 0.00 0.00 2.52
4257 6234 3.855379 TCCTACATTCGTCGTTTGATTCG 59.145 43.478 4.59 0.00 0.00 3.34
4258 6235 3.611113 CCTACATTCGTCGTTTGATTCGT 59.389 43.478 4.59 0.00 0.00 3.85
4259 6236 4.794762 CCTACATTCGTCGTTTGATTCGTA 59.205 41.667 4.59 0.00 0.00 3.43
4260 6237 4.817987 ACATTCGTCGTTTGATTCGTAG 57.182 40.909 4.59 0.00 0.00 3.51
4261 6238 3.611113 ACATTCGTCGTTTGATTCGTAGG 59.389 43.478 4.59 0.00 0.00 3.18
4262 6239 3.557577 TTCGTCGTTTGATTCGTAGGA 57.442 42.857 0.00 0.00 0.00 2.94
4263 6240 3.770263 TCGTCGTTTGATTCGTAGGAT 57.230 42.857 0.00 0.00 0.00 3.24
4264 6241 4.100707 TCGTCGTTTGATTCGTAGGATT 57.899 40.909 0.00 0.00 0.00 3.01
4265 6242 3.855379 TCGTCGTTTGATTCGTAGGATTG 59.145 43.478 0.00 0.00 0.00 2.67
4266 6243 3.855379 CGTCGTTTGATTCGTAGGATTGA 59.145 43.478 0.00 0.00 0.00 2.57
4267 6244 4.325204 CGTCGTTTGATTCGTAGGATTGAA 59.675 41.667 0.00 0.00 0.00 2.69
4268 6245 5.005394 CGTCGTTTGATTCGTAGGATTGAAT 59.995 40.000 0.00 0.00 37.52 2.57
4269 6246 6.411652 GTCGTTTGATTCGTAGGATTGAATC 58.588 40.000 7.76 7.76 46.77 2.52
4270 6247 5.522460 TCGTTTGATTCGTAGGATTGAATCC 59.478 40.000 16.35 16.35 46.29 3.01
4313 6290 8.862325 AGGATTCATTTGTACTACATTTCACA 57.138 30.769 0.00 0.00 0.00 3.58
4314 6291 8.950210 AGGATTCATTTGTACTACATTTCACAG 58.050 33.333 0.00 0.00 0.00 3.66
4315 6292 8.184192 GGATTCATTTGTACTACATTTCACAGG 58.816 37.037 0.00 0.00 0.00 4.00
4316 6293 8.862325 ATTCATTTGTACTACATTTCACAGGA 57.138 30.769 0.00 0.00 0.00 3.86
4317 6294 8.684386 TTCATTTGTACTACATTTCACAGGAA 57.316 30.769 0.00 0.00 0.00 3.36
4318 6295 8.862325 TCATTTGTACTACATTTCACAGGAAT 57.138 30.769 0.00 0.00 31.93 3.01
4319 6296 9.295825 TCATTTGTACTACATTTCACAGGAATT 57.704 29.630 0.00 0.00 31.93 2.17
4320 6297 9.559958 CATTTGTACTACATTTCACAGGAATTC 57.440 33.333 0.00 0.00 31.93 2.17
4321 6298 8.918202 TTTGTACTACATTTCACAGGAATTCT 57.082 30.769 5.23 0.00 31.93 2.40
4324 6301 9.431887 TGTACTACATTTCACAGGAATTCTAAC 57.568 33.333 5.23 0.00 31.93 2.34
4325 6302 9.431887 GTACTACATTTCACAGGAATTCTAACA 57.568 33.333 5.23 0.00 31.93 2.41
4327 6304 9.167311 ACTACATTTCACAGGAATTCTAACATC 57.833 33.333 5.23 0.00 31.93 3.06
4328 6305 7.396540 ACATTTCACAGGAATTCTAACATCC 57.603 36.000 5.23 0.00 31.93 3.51
4329 6306 6.947733 ACATTTCACAGGAATTCTAACATCCA 59.052 34.615 5.23 0.00 35.62 3.41
4330 6307 6.817765 TTTCACAGGAATTCTAACATCCAC 57.182 37.500 5.23 0.00 35.62 4.02
4331 6308 5.762179 TCACAGGAATTCTAACATCCACT 57.238 39.130 5.23 0.00 35.62 4.00
4332 6309 5.734720 TCACAGGAATTCTAACATCCACTC 58.265 41.667 5.23 0.00 35.62 3.51
4333 6310 5.248248 TCACAGGAATTCTAACATCCACTCA 59.752 40.000 5.23 0.00 35.62 3.41
4334 6311 5.939883 CACAGGAATTCTAACATCCACTCAA 59.060 40.000 5.23 0.00 35.62 3.02
4335 6312 6.430925 CACAGGAATTCTAACATCCACTCAAA 59.569 38.462 5.23 0.00 35.62 2.69
4336 6313 6.431234 ACAGGAATTCTAACATCCACTCAAAC 59.569 38.462 5.23 0.00 35.62 2.93
4337 6314 5.946377 AGGAATTCTAACATCCACTCAAACC 59.054 40.000 5.23 0.00 35.62 3.27
4338 6315 5.946377 GGAATTCTAACATCCACTCAAACCT 59.054 40.000 5.23 0.00 33.30 3.50
4339 6316 6.094186 GGAATTCTAACATCCACTCAAACCTC 59.906 42.308 5.23 0.00 33.30 3.85
4340 6317 5.825593 TTCTAACATCCACTCAAACCTCT 57.174 39.130 0.00 0.00 0.00 3.69
4341 6318 5.825593 TCTAACATCCACTCAAACCTCTT 57.174 39.130 0.00 0.00 0.00 2.85
4342 6319 5.551233 TCTAACATCCACTCAAACCTCTTG 58.449 41.667 0.00 0.00 0.00 3.02
4343 6320 3.146104 ACATCCACTCAAACCTCTTGG 57.854 47.619 0.00 0.00 39.83 3.61
4344 6321 2.711009 ACATCCACTCAAACCTCTTGGA 59.289 45.455 0.00 0.00 40.61 3.53
4345 6322 3.138283 ACATCCACTCAAACCTCTTGGAA 59.862 43.478 0.00 0.00 39.77 3.53
4346 6323 3.492102 TCCACTCAAACCTCTTGGAAG 57.508 47.619 0.00 0.00 33.31 3.46
4347 6324 3.045634 TCCACTCAAACCTCTTGGAAGA 58.954 45.455 0.00 0.00 33.31 2.87
4348 6325 3.458118 TCCACTCAAACCTCTTGGAAGAA 59.542 43.478 0.00 0.00 33.31 2.52
4349 6326 4.080015 TCCACTCAAACCTCTTGGAAGAAA 60.080 41.667 0.00 0.00 33.31 2.52
4350 6327 4.829492 CCACTCAAACCTCTTGGAAGAAAT 59.171 41.667 0.00 0.00 34.03 2.17
4351 6328 5.048434 CCACTCAAACCTCTTGGAAGAAATC 60.048 44.000 0.00 0.00 34.03 2.17
4365 6342 4.988540 GGAAGAAATCCTTTGTTTTTCCCG 59.011 41.667 0.00 0.00 45.56 5.14
4366 6343 5.452776 GGAAGAAATCCTTTGTTTTTCCCGT 60.453 40.000 0.00 0.00 45.56 5.28
4367 6344 4.944048 AGAAATCCTTTGTTTTTCCCGTG 58.056 39.130 0.00 0.00 31.25 4.94
4368 6345 4.647399 AGAAATCCTTTGTTTTTCCCGTGA 59.353 37.500 0.00 0.00 31.25 4.35
4369 6346 4.316205 AATCCTTTGTTTTTCCCGTGAC 57.684 40.909 0.00 0.00 0.00 3.67
4370 6347 2.724454 TCCTTTGTTTTTCCCGTGACA 58.276 42.857 0.00 0.00 0.00 3.58
4371 6348 2.424246 TCCTTTGTTTTTCCCGTGACAC 59.576 45.455 0.00 0.00 0.00 3.67
4372 6349 2.164624 CCTTTGTTTTTCCCGTGACACA 59.835 45.455 6.37 0.00 0.00 3.72
4373 6350 3.367498 CCTTTGTTTTTCCCGTGACACAA 60.367 43.478 6.37 0.00 0.00 3.33
4374 6351 4.429108 CTTTGTTTTTCCCGTGACACAAT 58.571 39.130 6.37 0.00 0.00 2.71
4375 6352 3.701532 TGTTTTTCCCGTGACACAATC 57.298 42.857 6.37 0.00 0.00 2.67
4376 6353 3.017442 TGTTTTTCCCGTGACACAATCA 58.983 40.909 6.37 0.00 33.79 2.57
4377 6354 3.444034 TGTTTTTCCCGTGACACAATCAA 59.556 39.130 6.37 0.00 39.72 2.57
4378 6355 4.082190 TGTTTTTCCCGTGACACAATCAAA 60.082 37.500 6.37 0.00 39.72 2.69
4379 6356 3.701532 TTTCCCGTGACACAATCAAAC 57.298 42.857 6.37 0.00 39.72 2.93
4380 6357 2.333688 TCCCGTGACACAATCAAACA 57.666 45.000 6.37 0.00 39.72 2.83
4381 6358 2.644676 TCCCGTGACACAATCAAACAA 58.355 42.857 6.37 0.00 39.72 2.83
4382 6359 3.017442 TCCCGTGACACAATCAAACAAA 58.983 40.909 6.37 0.00 39.72 2.83
4383 6360 3.112580 CCCGTGACACAATCAAACAAAC 58.887 45.455 6.37 0.00 39.72 2.93
4384 6361 3.428180 CCCGTGACACAATCAAACAAACA 60.428 43.478 6.37 0.00 39.72 2.83
4385 6362 3.545873 CCGTGACACAATCAAACAAACAC 59.454 43.478 6.37 0.00 39.72 3.32
4386 6363 4.162072 CGTGACACAATCAAACAAACACA 58.838 39.130 6.37 0.00 39.72 3.72
4387 6364 4.618912 CGTGACACAATCAAACAAACACAA 59.381 37.500 6.37 0.00 39.72 3.33
4388 6365 5.117745 CGTGACACAATCAAACAAACACAAA 59.882 36.000 6.37 0.00 39.72 2.83
4389 6366 6.183360 CGTGACACAATCAAACAAACACAAAT 60.183 34.615 6.37 0.00 39.72 2.32
4390 6367 7.172757 GTGACACAATCAAACAAACACAAATC 58.827 34.615 0.00 0.00 39.72 2.17
4391 6368 6.312426 TGACACAATCAAACAAACACAAATCC 59.688 34.615 0.00 0.00 33.02 3.01
4392 6369 5.584251 ACACAATCAAACAAACACAAATCCC 59.416 36.000 0.00 0.00 0.00 3.85
4393 6370 5.583854 CACAATCAAACAAACACAAATCCCA 59.416 36.000 0.00 0.00 0.00 4.37
4394 6371 6.260493 CACAATCAAACAAACACAAATCCCAT 59.740 34.615 0.00 0.00 0.00 4.00
4395 6372 7.440556 CACAATCAAACAAACACAAATCCCATA 59.559 33.333 0.00 0.00 0.00 2.74
4396 6373 7.656948 ACAATCAAACAAACACAAATCCCATAG 59.343 33.333 0.00 0.00 0.00 2.23
4397 6374 6.095432 TCAAACAAACACAAATCCCATAGG 57.905 37.500 0.00 0.00 0.00 2.57
4398 6375 5.011533 TCAAACAAACACAAATCCCATAGGG 59.988 40.000 0.00 0.00 46.11 3.53
4412 6389 3.693807 CCATAGGGATCCAATGGACATG 58.306 50.000 29.24 14.49 42.36 3.21
4413 6390 2.957402 TAGGGATCCAATGGACATGC 57.043 50.000 15.23 0.00 32.98 4.06
4414 6391 0.186873 AGGGATCCAATGGACATGCC 59.813 55.000 15.23 4.48 32.98 4.40
4423 6400 3.402186 TGGACATGCCATTCCGATC 57.598 52.632 4.93 0.00 43.33 3.69
4424 6401 0.179020 TGGACATGCCATTCCGATCC 60.179 55.000 4.93 0.00 43.33 3.36
4425 6402 0.109342 GGACATGCCATTCCGATCCT 59.891 55.000 0.00 0.00 36.34 3.24
4426 6403 1.347707 GGACATGCCATTCCGATCCTA 59.652 52.381 0.00 0.00 36.34 2.94
4427 6404 2.417719 GACATGCCATTCCGATCCTAC 58.582 52.381 0.00 0.00 0.00 3.18
4428 6405 1.768275 ACATGCCATTCCGATCCTACA 59.232 47.619 0.00 0.00 0.00 2.74
4429 6406 2.373169 ACATGCCATTCCGATCCTACAT 59.627 45.455 0.00 0.00 0.00 2.29
4430 6407 3.181440 ACATGCCATTCCGATCCTACATT 60.181 43.478 0.00 0.00 0.00 2.71
4431 6408 3.576078 TGCCATTCCGATCCTACATTT 57.424 42.857 0.00 0.00 0.00 2.32
4432 6409 3.897239 TGCCATTCCGATCCTACATTTT 58.103 40.909 0.00 0.00 0.00 1.82
4433 6410 3.882888 TGCCATTCCGATCCTACATTTTC 59.117 43.478 0.00 0.00 0.00 2.29
4434 6411 3.253432 GCCATTCCGATCCTACATTTTCC 59.747 47.826 0.00 0.00 0.00 3.13
4435 6412 3.821033 CCATTCCGATCCTACATTTTCCC 59.179 47.826 0.00 0.00 0.00 3.97
4436 6413 4.446311 CCATTCCGATCCTACATTTTCCCT 60.446 45.833 0.00 0.00 0.00 4.20
4437 6414 5.221843 CCATTCCGATCCTACATTTTCCCTA 60.222 44.000 0.00 0.00 0.00 3.53
4438 6415 6.476378 CATTCCGATCCTACATTTTCCCTAT 58.524 40.000 0.00 0.00 0.00 2.57
4439 6416 6.509523 TTCCGATCCTACATTTTCCCTATT 57.490 37.500 0.00 0.00 0.00 1.73
4440 6417 6.110411 TCCGATCCTACATTTTCCCTATTC 57.890 41.667 0.00 0.00 0.00 1.75
4441 6418 5.844516 TCCGATCCTACATTTTCCCTATTCT 59.155 40.000 0.00 0.00 0.00 2.40
4442 6419 6.329197 TCCGATCCTACATTTTCCCTATTCTT 59.671 38.462 0.00 0.00 0.00 2.52
4443 6420 6.428159 CCGATCCTACATTTTCCCTATTCTTG 59.572 42.308 0.00 0.00 0.00 3.02
4444 6421 6.992715 CGATCCTACATTTTCCCTATTCTTGT 59.007 38.462 0.00 0.00 0.00 3.16
4445 6422 7.171678 CGATCCTACATTTTCCCTATTCTTGTC 59.828 40.741 0.00 0.00 0.00 3.18
4446 6423 6.659824 TCCTACATTTTCCCTATTCTTGTCC 58.340 40.000 0.00 0.00 0.00 4.02
4447 6424 6.447084 TCCTACATTTTCCCTATTCTTGTCCT 59.553 38.462 0.00 0.00 0.00 3.85
4448 6425 7.036863 TCCTACATTTTCCCTATTCTTGTCCTT 60.037 37.037 0.00 0.00 0.00 3.36
4449 6426 7.615757 CCTACATTTTCCCTATTCTTGTCCTTT 59.384 37.037 0.00 0.00 0.00 3.11
4450 6427 7.855784 ACATTTTCCCTATTCTTGTCCTTTT 57.144 32.000 0.00 0.00 0.00 2.27
4451 6428 7.670364 ACATTTTCCCTATTCTTGTCCTTTTG 58.330 34.615 0.00 0.00 0.00 2.44
4452 6429 5.722021 TTTCCCTATTCTTGTCCTTTTGC 57.278 39.130 0.00 0.00 0.00 3.68
4453 6430 4.380843 TCCCTATTCTTGTCCTTTTGCA 57.619 40.909 0.00 0.00 0.00 4.08
4454 6431 4.735369 TCCCTATTCTTGTCCTTTTGCAA 58.265 39.130 0.00 0.00 0.00 4.08
4455 6432 5.332743 TCCCTATTCTTGTCCTTTTGCAAT 58.667 37.500 0.00 0.00 0.00 3.56
4456 6433 5.418840 TCCCTATTCTTGTCCTTTTGCAATC 59.581 40.000 0.00 0.00 0.00 2.67
4457 6434 5.394553 CCCTATTCTTGTCCTTTTGCAATCC 60.395 44.000 0.00 0.00 0.00 3.01
4458 6435 5.420104 CCTATTCTTGTCCTTTTGCAATCCT 59.580 40.000 0.00 0.00 0.00 3.24
4459 6436 6.603201 CCTATTCTTGTCCTTTTGCAATCCTA 59.397 38.462 0.00 0.00 0.00 2.94
4460 6437 7.286316 CCTATTCTTGTCCTTTTGCAATCCTAT 59.714 37.037 0.00 0.00 0.00 2.57
4461 6438 5.902613 TCTTGTCCTTTTGCAATCCTATG 57.097 39.130 0.00 0.00 0.00 2.23
4462 6439 5.569355 TCTTGTCCTTTTGCAATCCTATGA 58.431 37.500 0.00 0.00 0.00 2.15
4463 6440 6.009589 TCTTGTCCTTTTGCAATCCTATGAA 58.990 36.000 0.00 0.00 0.00 2.57
4464 6441 6.664816 TCTTGTCCTTTTGCAATCCTATGAAT 59.335 34.615 0.00 0.00 0.00 2.57
4465 6442 6.455360 TGTCCTTTTGCAATCCTATGAATC 57.545 37.500 0.00 0.00 0.00 2.52
4466 6443 5.951148 TGTCCTTTTGCAATCCTATGAATCA 59.049 36.000 0.00 0.00 0.00 2.57
4467 6444 6.436847 TGTCCTTTTGCAATCCTATGAATCAA 59.563 34.615 0.00 0.00 0.00 2.57
4468 6445 7.039152 TGTCCTTTTGCAATCCTATGAATCAAA 60.039 33.333 0.00 0.00 0.00 2.69
4469 6446 7.490402 GTCCTTTTGCAATCCTATGAATCAAAG 59.510 37.037 0.00 0.00 0.00 2.77
4470 6447 7.396907 TCCTTTTGCAATCCTATGAATCAAAGA 59.603 33.333 0.00 0.00 0.00 2.52
4471 6448 7.705325 CCTTTTGCAATCCTATGAATCAAAGAG 59.295 37.037 0.00 0.00 0.00 2.85
4472 6449 6.704289 TTGCAATCCTATGAATCAAAGAGG 57.296 37.500 0.00 3.58 0.00 3.69
4473 6450 4.581824 TGCAATCCTATGAATCAAAGAGGC 59.418 41.667 4.80 3.46 0.00 4.70
4474 6451 4.022503 GCAATCCTATGAATCAAAGAGGCC 60.023 45.833 0.00 0.00 0.00 5.19
4475 6452 3.864789 TCCTATGAATCAAAGAGGCCC 57.135 47.619 0.00 0.00 0.00 5.80
4476 6453 3.397527 TCCTATGAATCAAAGAGGCCCT 58.602 45.455 0.00 0.00 0.00 5.19
4477 6454 4.566837 TCCTATGAATCAAAGAGGCCCTA 58.433 43.478 0.00 0.00 0.00 3.53
4478 6455 4.975147 TCCTATGAATCAAAGAGGCCCTAA 59.025 41.667 0.00 0.00 0.00 2.69
4479 6456 5.072329 TCCTATGAATCAAAGAGGCCCTAAG 59.928 44.000 0.00 0.00 0.00 2.18
4480 6457 3.652057 TGAATCAAAGAGGCCCTAAGG 57.348 47.619 0.00 0.00 0.00 2.69
4481 6458 2.919602 TGAATCAAAGAGGCCCTAAGGT 59.080 45.455 0.00 0.00 34.57 3.50
4482 6459 3.282885 GAATCAAAGAGGCCCTAAGGTG 58.717 50.000 0.00 0.00 34.57 4.00
4483 6460 0.991920 TCAAAGAGGCCCTAAGGTGG 59.008 55.000 0.00 0.00 34.57 4.61
4484 6461 0.991920 CAAAGAGGCCCTAAGGTGGA 59.008 55.000 0.00 0.00 34.57 4.02
4485 6462 1.354368 CAAAGAGGCCCTAAGGTGGAA 59.646 52.381 0.00 0.00 34.57 3.53
4486 6463 0.992695 AAGAGGCCCTAAGGTGGAAC 59.007 55.000 0.00 0.00 34.57 3.62
4487 6464 0.119358 AGAGGCCCTAAGGTGGAACT 59.881 55.000 0.00 0.00 36.74 3.01
4488 6465 1.365028 AGAGGCCCTAAGGTGGAACTA 59.635 52.381 0.00 0.00 36.74 2.24
4489 6466 1.485480 GAGGCCCTAAGGTGGAACTAC 59.515 57.143 0.00 0.00 36.74 2.73
4490 6467 1.203389 AGGCCCTAAGGTGGAACTACA 60.203 52.381 0.00 0.00 36.74 2.74
4491 6468 1.844497 GGCCCTAAGGTGGAACTACAT 59.156 52.381 0.00 0.00 36.74 2.29
4492 6469 2.421529 GGCCCTAAGGTGGAACTACATG 60.422 54.545 0.00 0.00 36.74 3.21
4493 6470 2.919228 CCCTAAGGTGGAACTACATGC 58.081 52.381 0.00 0.00 36.74 4.06
4494 6471 2.550978 CCTAAGGTGGAACTACATGCG 58.449 52.381 0.00 0.00 36.74 4.73
4495 6472 2.167693 CCTAAGGTGGAACTACATGCGA 59.832 50.000 0.00 0.00 36.74 5.10
4496 6473 3.181465 CCTAAGGTGGAACTACATGCGAT 60.181 47.826 0.00 0.00 36.74 4.58
4497 6474 2.604046 AGGTGGAACTACATGCGATC 57.396 50.000 0.00 0.00 36.74 3.69
4498 6475 2.111384 AGGTGGAACTACATGCGATCT 58.889 47.619 0.00 0.00 36.74 2.75
4499 6476 2.101582 AGGTGGAACTACATGCGATCTC 59.898 50.000 0.00 0.00 36.74 2.75
4500 6477 2.101582 GGTGGAACTACATGCGATCTCT 59.898 50.000 0.00 0.00 36.74 3.10
4501 6478 3.318275 GGTGGAACTACATGCGATCTCTA 59.682 47.826 0.00 0.00 36.74 2.43
4502 6479 4.541779 GTGGAACTACATGCGATCTCTAG 58.458 47.826 0.00 0.00 0.00 2.43
4503 6480 3.570125 TGGAACTACATGCGATCTCTAGG 59.430 47.826 0.00 0.00 0.00 3.02
4504 6481 3.821600 GGAACTACATGCGATCTCTAGGA 59.178 47.826 0.00 0.00 0.00 2.94
4505 6482 4.083003 GGAACTACATGCGATCTCTAGGAG 60.083 50.000 0.00 0.00 0.00 3.69
4506 6483 4.093472 ACTACATGCGATCTCTAGGAGT 57.907 45.455 0.00 0.00 0.00 3.85
4507 6484 4.465886 ACTACATGCGATCTCTAGGAGTT 58.534 43.478 0.00 0.00 0.00 3.01
4508 6485 5.622180 ACTACATGCGATCTCTAGGAGTTA 58.378 41.667 0.00 0.00 0.00 2.24
4509 6486 5.703592 ACTACATGCGATCTCTAGGAGTTAG 59.296 44.000 0.00 0.00 0.00 2.34
4510 6487 3.823873 ACATGCGATCTCTAGGAGTTAGG 59.176 47.826 0.00 0.00 0.00 2.69
4511 6488 2.865079 TGCGATCTCTAGGAGTTAGGG 58.135 52.381 0.00 0.00 0.00 3.53
4512 6489 2.175069 TGCGATCTCTAGGAGTTAGGGT 59.825 50.000 0.00 0.00 31.33 4.34
4513 6490 2.554893 GCGATCTCTAGGAGTTAGGGTG 59.445 54.545 0.00 0.00 31.33 4.61
4522 6499 4.820894 AGGAGTTAGGGTGTTGTATGTC 57.179 45.455 0.00 0.00 0.00 3.06
4525 6502 2.004733 GTTAGGGTGTTGTATGTCCGC 58.995 52.381 0.00 0.00 0.00 5.54
4526 6503 0.173935 TAGGGTGTTGTATGTCCGCG 59.826 55.000 0.00 0.00 0.00 6.46
4533 6510 2.507547 GTATGTCCGCGCGTCCAA 60.508 61.111 29.95 11.70 0.00 3.53
4534 6511 2.095847 GTATGTCCGCGCGTCCAAA 61.096 57.895 29.95 7.58 0.00 3.28
4567 6544 1.379977 TCGCCTCGATGTTCCCTCT 60.380 57.895 0.00 0.00 0.00 3.69
4675 6656 4.443978 AATCAAATCCATGGTCGAGGAT 57.556 40.909 12.58 7.19 46.33 3.24
4680 6661 1.866015 TCCATGGTCGAGGATTGAGT 58.134 50.000 12.58 0.00 0.00 3.41
4792 6775 3.713764 CACAAGATTAGAGGGAGGGTGAT 59.286 47.826 0.00 0.00 0.00 3.06
4831 6869 0.393537 GGCCATCTTGGTCACTCCTG 60.394 60.000 0.00 0.00 42.98 3.86
4843 6881 1.069765 ACTCCTGCCACACAAGACG 59.930 57.895 0.00 0.00 0.00 4.18
4848 6906 0.946221 CTGCCACACAAGACGTCTCC 60.946 60.000 20.33 2.43 0.00 3.71
4849 6907 1.367840 GCCACACAAGACGTCTCCT 59.632 57.895 20.33 0.09 0.00 3.69
4858 6916 1.551452 AGACGTCTCCTCTCCTTTGG 58.449 55.000 13.58 0.00 0.00 3.28
4877 6935 2.431683 GAGGTCACCAGGCTTGCA 59.568 61.111 0.00 0.00 0.00 4.08
4907 6965 0.039035 AGAAGAGCTCTGTCGTCCCT 59.961 55.000 19.06 0.00 31.12 4.20
4938 6996 8.403236 GTTGCGGGTATTTAAATCTAGACAAAT 58.597 33.333 3.39 4.47 0.00 2.32
4948 7006 6.840780 AAATCTAGACAAATTCCTTGGTGG 57.159 37.500 0.00 0.00 39.56 4.61
4950 7008 1.632589 AGACAAATTCCTTGGTGGCC 58.367 50.000 0.00 0.00 39.56 5.36
4953 7011 2.368548 GACAAATTCCTTGGTGGCCTTT 59.631 45.455 3.32 0.00 39.56 3.11
4976 7034 0.107017 CCATGCGACATCCTTCCCTT 60.107 55.000 0.00 0.00 0.00 3.95
4995 7053 4.567747 CCCTTTGAAGTATGTTAGCACCCT 60.568 45.833 0.00 0.00 0.00 4.34
4996 7054 4.636206 CCTTTGAAGTATGTTAGCACCCTC 59.364 45.833 0.00 0.00 0.00 4.30
4997 7055 4.901197 TTGAAGTATGTTAGCACCCTCA 57.099 40.909 0.00 0.00 0.00 3.86
4998 7056 4.202245 TGAAGTATGTTAGCACCCTCAC 57.798 45.455 0.00 0.00 0.00 3.51
4999 7057 3.055385 TGAAGTATGTTAGCACCCTCACC 60.055 47.826 0.00 0.00 0.00 4.02
5000 7058 2.546899 AGTATGTTAGCACCCTCACCA 58.453 47.619 0.00 0.00 0.00 4.17
5001 7059 3.115390 AGTATGTTAGCACCCTCACCAT 58.885 45.455 0.00 0.00 0.00 3.55
5002 7060 2.425143 ATGTTAGCACCCTCACCATG 57.575 50.000 0.00 0.00 0.00 3.66
5003 7061 0.322456 TGTTAGCACCCTCACCATGC 60.322 55.000 0.00 0.00 39.74 4.06
5004 7062 0.322456 GTTAGCACCCTCACCATGCA 60.322 55.000 0.00 0.00 41.97 3.96
5005 7063 0.625316 TTAGCACCCTCACCATGCAT 59.375 50.000 0.00 0.00 41.97 3.96
5006 7064 1.506025 TAGCACCCTCACCATGCATA 58.494 50.000 0.00 0.00 41.97 3.14
5007 7065 0.848735 AGCACCCTCACCATGCATAT 59.151 50.000 0.00 0.00 41.97 1.78
5008 7066 1.202855 AGCACCCTCACCATGCATATC 60.203 52.381 0.00 0.00 41.97 1.63
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
10 11 3.536570 TGCTAGCATTTACGCATGGTAA 58.463 40.909 14.93 0.00 36.84 2.85
20 21 9.624697 CATTAGTGTTCTTTTTGCTAGCATTTA 57.375 29.630 20.13 0.00 0.00 1.40
76 83 7.391148 TCCACAAATGAGAGCCTAAAATTAC 57.609 36.000 0.00 0.00 0.00 1.89
78 85 5.420104 CCTCCACAAATGAGAGCCTAAAATT 59.580 40.000 0.00 0.00 31.26 1.82
120 127 5.047847 GGTTTCAGAAACAAAGCTTAACCC 58.952 41.667 24.37 2.26 43.15 4.11
121 128 5.656480 TGGTTTCAGAAACAAAGCTTAACC 58.344 37.500 24.37 12.89 43.15 2.85
193 200 0.618968 GAGGAGGTGTGGAGGTGGAT 60.619 60.000 0.00 0.00 0.00 3.41
210 217 2.641305 CTTTGAATCTGGCAGAGGGAG 58.359 52.381 23.24 11.64 0.00 4.30
266 286 1.357761 GAACCAAGAAAGGGGGATGGA 59.642 52.381 0.00 0.00 35.16 3.41
291 311 4.433615 GAGATGAGGCAGACAAAACGATA 58.566 43.478 0.00 0.00 0.00 2.92
327 347 1.376609 CTGAGCAACCCATAACCGCC 61.377 60.000 0.00 0.00 0.00 6.13
380 400 0.098905 GTCGTCACTGCTAGCATCGA 59.901 55.000 19.72 20.80 0.00 3.59
393 413 4.337060 CACCCGCGAGTGTCGTCA 62.337 66.667 13.16 0.00 42.81 4.35
405 425 0.886563 AGAAGGTAGAACGACACCCG 59.113 55.000 0.00 0.00 45.44 5.28
462 482 5.357596 CGTACCTAGACTTTCCTCTAAGCTT 59.642 44.000 3.48 3.48 0.00 3.74
486 506 2.033194 CCAGCCGGTTCTTCGAACC 61.033 63.158 14.26 14.26 36.96 3.62
491 511 3.119096 GTCGCCAGCCGGTTCTTC 61.119 66.667 1.90 0.00 37.59 2.87
501 521 3.733960 TCGTGGAGTCGTCGCCAG 61.734 66.667 5.24 1.09 43.70 4.85
538 558 1.630244 GCGAGCAAGCAAGATGACGT 61.630 55.000 0.00 0.00 37.05 4.34
541 561 2.102438 CCGCGAGCAAGCAAGATGA 61.102 57.895 8.23 0.00 36.85 2.92
565 585 4.911053 TGATAAAACACAACCAACACGAC 58.089 39.130 0.00 0.00 0.00 4.34
600 620 2.270434 TAGAGGGACAAGGGATGCTT 57.730 50.000 0.00 0.00 0.00 3.91
613 633 8.470805 GGTACAACATATGACATAGATAGAGGG 58.529 40.741 10.38 0.00 0.00 4.30
681 750 2.280797 TTGAGCACTCACGGCACC 60.281 61.111 0.00 0.00 39.66 5.01
716 785 5.050363 CAGATCTTTGACGACCGAAGAAAAA 60.050 40.000 13.37 0.00 45.68 1.94
719 788 3.575630 CAGATCTTTGACGACCGAAGAA 58.424 45.455 13.37 2.35 45.68 2.52
720 789 2.671351 GCAGATCTTTGACGACCGAAGA 60.671 50.000 12.28 12.28 46.38 2.87
721 790 1.656095 GCAGATCTTTGACGACCGAAG 59.344 52.381 0.00 0.00 37.57 3.79
722 791 1.272490 AGCAGATCTTTGACGACCGAA 59.728 47.619 0.00 0.00 0.00 4.30
726 795 1.914700 GACGAGCAGATCTTTGACGAC 59.085 52.381 12.87 5.61 0.00 4.34
727 796 1.813178 AGACGAGCAGATCTTTGACGA 59.187 47.619 12.87 0.00 0.00 4.20
728 797 2.270275 AGACGAGCAGATCTTTGACG 57.730 50.000 0.00 0.00 0.00 4.35
729 798 2.670414 CCAAGACGAGCAGATCTTTGAC 59.330 50.000 0.00 0.00 32.77 3.18
731 800 1.396301 GCCAAGACGAGCAGATCTTTG 59.604 52.381 0.00 0.00 32.77 2.77
732 801 1.002430 TGCCAAGACGAGCAGATCTTT 59.998 47.619 0.00 0.00 32.77 2.52
784 2198 2.890311 TCCGTGCACATGATTTTTCCTT 59.110 40.909 18.64 0.00 0.00 3.36
785 2199 2.513753 TCCGTGCACATGATTTTTCCT 58.486 42.857 18.64 0.00 0.00 3.36
786 2200 3.296322 TTCCGTGCACATGATTTTTCC 57.704 42.857 18.64 0.00 0.00 3.13
787 2201 4.434593 GCAATTCCGTGCACATGATTTTTC 60.435 41.667 18.64 6.11 44.29 2.29
788 2202 3.432933 GCAATTCCGTGCACATGATTTTT 59.567 39.130 18.64 4.64 44.29 1.94
790 2204 2.609350 GCAATTCCGTGCACATGATTT 58.391 42.857 18.64 11.81 44.29 2.17
803 2310 2.489938 TGTAGGGACAGTGCAATTCC 57.510 50.000 6.78 6.78 0.00 3.01
914 2428 4.011966 TCCATGCCTACACATCATCATC 57.988 45.455 0.00 0.00 0.00 2.92
936 2452 2.964464 CTGATCATCAGCTGAGGGTAGT 59.036 50.000 26.71 11.61 37.72 2.73
985 2502 1.955080 CCTCATCGTACAGGTAGACCC 59.045 57.143 0.00 0.00 36.42 4.46
1239 2757 0.322322 CCAGGTTGTAGCCGTTGGTA 59.678 55.000 0.00 0.00 0.00 3.25
1283 2801 7.370383 CACAAGGTCTGCACAACTAAAATTAT 58.630 34.615 0.00 0.00 0.00 1.28
1311 2829 0.036483 TGAAGCATAGGCACAGCGAA 60.036 50.000 0.67 0.00 44.61 4.70
1379 2904 2.084546 GCTTGGCAACTCTAAATCGGT 58.915 47.619 0.00 0.00 37.61 4.69
1416 2968 9.520204 CAAAATATCTGAAGGCATCGTTTAATT 57.480 29.630 0.00 0.00 0.00 1.40
1474 3026 5.546499 AGGTCCTGTCTGTAATTTCCTGTAA 59.454 40.000 0.00 0.00 0.00 2.41
1475 3027 5.091552 AGGTCCTGTCTGTAATTTCCTGTA 58.908 41.667 0.00 0.00 0.00 2.74
1478 3030 4.168101 TGAGGTCCTGTCTGTAATTTCCT 58.832 43.478 0.00 0.00 0.00 3.36
1479 3031 4.553330 TGAGGTCCTGTCTGTAATTTCC 57.447 45.455 0.00 0.00 0.00 3.13
1480 3032 9.832445 TTTATATGAGGTCCTGTCTGTAATTTC 57.168 33.333 0.00 0.00 0.00 2.17
1489 3097 5.360591 CACCACTTTATATGAGGTCCTGTC 58.639 45.833 0.00 0.00 0.00 3.51
1520 3128 6.870971 ATATGACCACGTGTTTGTAAACTT 57.129 33.333 15.65 0.00 39.59 2.66
1522 3130 6.739550 GCTTATATGACCACGTGTTTGTAAAC 59.260 38.462 15.65 0.65 39.33 2.01
1531 3139 2.502213 TCCGCTTATATGACCACGTG 57.498 50.000 9.08 9.08 0.00 4.49
1533 3141 5.418310 AATTTTCCGCTTATATGACCACG 57.582 39.130 0.00 0.00 0.00 4.94
1546 3154 6.128007 CCCAGGATGTATATGTAATTTTCCGC 60.128 42.308 0.00 0.00 0.00 5.54
1548 3156 8.706322 AACCCAGGATGTATATGTAATTTTCC 57.294 34.615 0.00 0.00 0.00 3.13
1571 3179 3.206150 TCAGAGTCCTGTTTGCAAGAAC 58.794 45.455 0.00 0.00 41.16 3.01
1582 3190 4.732672 TCTGTGATCATTCAGAGTCCTG 57.267 45.455 11.04 0.00 42.43 3.86
1588 3196 8.618677 GCAATCTTTAATCTGTGATCATTCAGA 58.381 33.333 15.99 15.99 43.38 3.27
1590 3198 8.283699 TGCAATCTTTAATCTGTGATCATTCA 57.716 30.769 0.00 0.00 0.00 2.57
1591 3199 8.404000 ACTGCAATCTTTAATCTGTGATCATTC 58.596 33.333 0.00 0.00 0.00 2.67
1592 3200 8.289939 ACTGCAATCTTTAATCTGTGATCATT 57.710 30.769 0.00 0.00 0.00 2.57
1593 3201 7.876936 ACTGCAATCTTTAATCTGTGATCAT 57.123 32.000 0.00 0.00 0.00 2.45
1605 3213 7.121168 CAGATTTAGACCCAACTGCAATCTTTA 59.879 37.037 0.00 0.00 33.21 1.85
1627 3235 3.726557 TGGTTCCATTCTTGAGCAGAT 57.273 42.857 0.00 0.00 0.00 2.90
1659 3267 0.256464 ACAAAGTGGTTTCGTCCCCA 59.744 50.000 0.00 0.00 0.00 4.96
1697 3305 5.104360 AGTCCATTGCATATTCTACTGTGGT 60.104 40.000 0.00 0.00 0.00 4.16
1698 3306 5.371526 AGTCCATTGCATATTCTACTGTGG 58.628 41.667 0.00 0.00 0.00 4.17
1699 3307 5.468072 GGAGTCCATTGCATATTCTACTGTG 59.532 44.000 3.60 0.00 0.00 3.66
1700 3308 5.130975 TGGAGTCCATTGCATATTCTACTGT 59.869 40.000 8.12 0.00 0.00 3.55
1701 3309 5.468072 GTGGAGTCCATTGCATATTCTACTG 59.532 44.000 16.67 0.00 35.28 2.74
1702 3310 5.455326 GGTGGAGTCCATTGCATATTCTACT 60.455 44.000 16.67 0.00 35.28 2.57
1703 3311 4.757149 GGTGGAGTCCATTGCATATTCTAC 59.243 45.833 16.67 0.00 35.28 2.59
1840 3448 0.036022 GGAGGAGCTATGATGCCCAC 59.964 60.000 0.00 0.00 0.00 4.61
1849 3457 4.322057 ACAATGGTTTTGGAGGAGCTAT 57.678 40.909 0.00 0.00 0.00 2.97
1864 3472 1.062258 GTGCGCATCAACAACAATGG 58.938 50.000 15.91 0.00 0.00 3.16
1939 3548 5.725325 AGACCTCTTGTAGTTGGAAGTAC 57.275 43.478 0.00 0.00 35.78 2.73
1947 3556 7.707035 CGAATTGCTATTAGACCTCTTGTAGTT 59.293 37.037 0.00 0.00 0.00 2.24
1973 3582 3.128242 AGACAGTATGCAGCATTTCAAGC 59.872 43.478 14.58 0.00 42.53 4.01
2107 3717 1.979855 CTCATGTCAAACCCCACACA 58.020 50.000 0.00 0.00 0.00 3.72
2130 3740 3.735514 GCGTCAAGGAGAGGTAAGCTAAG 60.736 52.174 0.00 0.00 34.65 2.18
2158 3768 1.479709 CTCAGGAGGTCAAGGATCGT 58.520 55.000 0.00 0.00 0.00 3.73
2162 3772 1.984570 CCGCTCAGGAGGTCAAGGA 60.985 63.158 0.00 0.00 45.00 3.36
2286 3896 7.418337 AATCATACTGTGTGTGTGGATAGTA 57.582 36.000 4.44 0.00 38.18 1.82
2289 3899 6.128035 GCAAAATCATACTGTGTGTGTGGATA 60.128 38.462 4.44 0.00 38.18 2.59
2293 3903 4.229096 GGCAAAATCATACTGTGTGTGTG 58.771 43.478 4.44 1.10 38.85 3.82
2294 3904 3.255642 GGGCAAAATCATACTGTGTGTGT 59.744 43.478 4.44 0.00 0.00 3.72
2364 3974 3.263170 TCAGGGTCTAATTTGCACTGCTA 59.737 43.478 1.98 0.00 0.00 3.49
2400 4010 7.715249 TCAAGCTTAATTCACAACAAGTACTCT 59.285 33.333 0.00 0.00 0.00 3.24
2403 4013 8.905702 CAATCAAGCTTAATTCACAACAAGTAC 58.094 33.333 0.00 0.00 0.00 2.73
2443 4053 3.063997 GCACATCATCTACCTTGAAACCG 59.936 47.826 0.00 0.00 0.00 4.44
2446 4056 9.330063 CTTTATAGCACATCATCTACCTTGAAA 57.670 33.333 0.00 0.00 0.00 2.69
2513 4123 8.902806 TCCATTTGACCAGTCACAATAATATTC 58.097 33.333 0.00 0.00 39.66 1.75
2529 4139 6.279513 TGATGGTATTGTTTCCATTTGACC 57.720 37.500 0.00 0.00 43.45 4.02
2634 4244 7.648142 TGAAAACATGGACACATTCTCTAAAC 58.352 34.615 0.00 0.00 34.35 2.01
2670 4280 4.567747 CCCTACATTTTGTTAGGCAGAGGT 60.568 45.833 0.00 0.00 0.00 3.85
2709 4319 1.480137 AGCTTGATCTGTTCTCGGAGG 59.520 52.381 4.96 0.00 32.02 4.30
2728 4338 1.066002 CACCTTGGTGTCTGCAAACAG 59.934 52.381 11.39 0.00 45.95 3.16
2736 4346 1.434188 TCATGGTCACCTTGGTGTCT 58.566 50.000 18.05 0.00 30.78 3.41
2747 4357 0.107703 GTTGGCCTCGATCATGGTCA 60.108 55.000 6.80 4.39 36.01 4.02
2804 4414 2.050144 TGCTGATGAGGAATAGGGACC 58.950 52.381 0.00 0.00 0.00 4.46
2826 4436 2.697425 CGAGAAATCGTGCCTGCG 59.303 61.111 0.00 0.00 0.00 5.18
2837 4448 2.289195 ACCGTCACTAAATGCCGAGAAA 60.289 45.455 0.00 0.00 0.00 2.52
2842 4453 1.567504 CCTACCGTCACTAAATGCCG 58.432 55.000 0.00 0.00 0.00 5.69
2846 4457 2.355412 GGTTGCCCTACCGTCACTAAAT 60.355 50.000 0.00 0.00 0.00 1.40
2850 4461 1.827399 CTGGTTGCCCTACCGTCACT 61.827 60.000 0.00 0.00 41.28 3.41
2937 4548 4.779475 AACCTCCTGTTGCTCACG 57.221 55.556 0.00 0.00 35.31 4.35
2954 4566 4.941263 CCCGAAATACCAGACAAGATTTCA 59.059 41.667 6.91 0.00 37.90 2.69
2955 4567 5.183228 TCCCGAAATACCAGACAAGATTTC 58.817 41.667 0.00 0.00 35.75 2.17
2973 4585 2.443958 ATGTCACTGAGATCTCCCGA 57.556 50.000 20.03 10.55 0.00 5.14
2997 4626 7.606456 GGACATACTGACAAGGTTTATCTGAAA 59.394 37.037 0.00 0.00 0.00 2.69
3012 4687 5.053145 GGACATTGAGATGGACATACTGAC 58.947 45.833 0.00 0.00 37.60 3.51
3035 4710 9.965824 AAACAGTCAAGTTAAAATAACATCCTG 57.034 29.630 3.37 5.72 0.00 3.86
3083 4759 6.654793 TTTAAACATGTGTGGTTCTTTTGC 57.345 33.333 0.00 0.00 36.46 3.68
3164 4860 0.674895 CAGCCTGTACAACTCCTGCC 60.675 60.000 0.00 0.00 0.00 4.85
3245 4941 2.562298 GTGCCATCATGTCCAAAGGAAA 59.438 45.455 0.00 0.00 31.38 3.13
3265 4961 2.203015 GGCAGTGGTGTCACACGT 60.203 61.111 0.73 0.00 45.91 4.49
3274 4970 1.757306 CCAGAGAGTTGGCAGTGGT 59.243 57.895 0.00 0.00 0.00 4.16
3443 5139 1.466167 CCCTTGTTGCATCGAACTCAG 59.534 52.381 0.00 0.00 0.00 3.35
3447 5143 1.234821 TGACCCTTGTTGCATCGAAC 58.765 50.000 0.00 0.00 0.00 3.95
3582 5558 3.314541 ACGATCCAGTGTTCCAGTAAC 57.685 47.619 0.00 0.00 38.67 2.50
3607 5583 4.747108 ACAGTTTGACTTTCACAGAGATCG 59.253 41.667 0.00 0.00 0.00 3.69
3642 5618 2.945668 GCCGTTAGGAATGCAGAAGAAT 59.054 45.455 0.00 0.00 41.02 2.40
3643 5619 2.356135 GCCGTTAGGAATGCAGAAGAA 58.644 47.619 0.00 0.00 41.02 2.52
3644 5620 1.739035 CGCCGTTAGGAATGCAGAAGA 60.739 52.381 0.00 0.00 41.02 2.87
3668 5644 3.302365 TTAGGTAAGAACAACCGGACG 57.698 47.619 9.46 0.00 42.15 4.79
3674 5650 6.368213 CAACGGTTCATTAGGTAAGAACAAC 58.632 40.000 0.00 0.00 42.50 3.32
3694 5670 3.004839 AGTCCTGATGATACGATCCAACG 59.995 47.826 0.00 0.00 39.31 4.10
3890 5867 1.566018 GGGCTCCGTGAACTTTGTCG 61.566 60.000 0.00 0.00 0.00 4.35
3983 5960 0.109597 CACAGCTTCCAAATCCACGC 60.110 55.000 0.00 0.00 0.00 5.34
3991 5968 1.908619 TGGCTAGATCACAGCTTCCAA 59.091 47.619 16.23 0.00 39.09 3.53
3996 5973 0.835941 CCCTTGGCTAGATCACAGCT 59.164 55.000 16.23 0.00 39.09 4.24
4001 5978 1.009552 TCCCTTCCCTTGGCTAGATCA 59.990 52.381 0.00 0.00 0.00 2.92
4038 6015 1.663388 TACTGCACCGAACACTGCG 60.663 57.895 0.00 0.00 36.08 5.18
4069 6046 1.303561 GCCTGGTGATGGCTCAACA 60.304 57.895 0.00 4.93 46.84 3.33
4070 6047 3.595819 GCCTGGTGATGGCTCAAC 58.404 61.111 0.00 0.00 46.38 3.18
4076 6053 2.707849 GCTTGCTGCCTGGTGATGG 61.708 63.158 0.00 0.00 35.15 3.51
4077 6054 2.882876 GCTTGCTGCCTGGTGATG 59.117 61.111 0.00 0.00 35.15 3.07
4086 6063 0.392998 TAGCTTACCAGGCTTGCTGC 60.393 55.000 10.05 0.00 40.74 5.25
4087 6064 2.158842 AGATAGCTTACCAGGCTTGCTG 60.159 50.000 10.05 0.00 40.74 4.41
4088 6065 2.103941 GAGATAGCTTACCAGGCTTGCT 59.896 50.000 0.00 6.04 40.74 3.91
4089 6066 2.158900 TGAGATAGCTTACCAGGCTTGC 60.159 50.000 0.00 0.00 40.74 4.01
4090 6067 3.827008 TGAGATAGCTTACCAGGCTTG 57.173 47.619 0.00 0.00 40.74 4.01
4091 6068 4.844349 TTTGAGATAGCTTACCAGGCTT 57.156 40.909 0.00 0.00 40.74 4.35
4092 6069 4.844349 TTTTGAGATAGCTTACCAGGCT 57.156 40.909 0.00 0.00 43.02 4.58
4111 6088 5.408299 GTGGCTCAACAGAGTTTTTGTTTTT 59.592 36.000 0.00 0.00 36.67 1.94
4112 6089 4.929211 GTGGCTCAACAGAGTTTTTGTTTT 59.071 37.500 0.00 0.00 36.67 2.43
4113 6090 4.494484 GTGGCTCAACAGAGTTTTTGTTT 58.506 39.130 0.00 0.00 36.67 2.83
4114 6091 3.427503 CGTGGCTCAACAGAGTTTTTGTT 60.428 43.478 0.00 0.00 39.23 2.83
4115 6092 2.097466 CGTGGCTCAACAGAGTTTTTGT 59.903 45.455 0.00 0.00 0.00 2.83
4116 6093 2.541588 CCGTGGCTCAACAGAGTTTTTG 60.542 50.000 0.00 0.00 0.00 2.44
4117 6094 1.676006 CCGTGGCTCAACAGAGTTTTT 59.324 47.619 0.00 0.00 0.00 1.94
4118 6095 1.134220 TCCGTGGCTCAACAGAGTTTT 60.134 47.619 0.00 0.00 0.00 2.43
4119 6096 0.468226 TCCGTGGCTCAACAGAGTTT 59.532 50.000 0.00 0.00 0.00 2.66
4120 6097 0.687354 ATCCGTGGCTCAACAGAGTT 59.313 50.000 0.00 0.00 0.00 3.01
4121 6098 0.036952 CATCCGTGGCTCAACAGAGT 60.037 55.000 0.00 0.00 0.00 3.24
4135 6112 0.392863 TGTGGCAGGAATGACATCCG 60.393 55.000 0.00 0.00 44.60 4.18
4136 6113 1.386533 CTGTGGCAGGAATGACATCC 58.613 55.000 0.00 0.00 39.96 3.51
4153 6130 3.443681 ACCCTTAATTTCGATGGTTGCTG 59.556 43.478 0.00 0.00 0.00 4.41
4154 6131 3.694566 GACCCTTAATTTCGATGGTTGCT 59.305 43.478 0.00 0.00 0.00 3.91
4155 6132 3.694566 AGACCCTTAATTTCGATGGTTGC 59.305 43.478 0.00 0.00 0.00 4.17
4156 6133 5.186198 AGAGACCCTTAATTTCGATGGTTG 58.814 41.667 0.00 0.00 0.00 3.77
4157 6134 5.437191 AGAGACCCTTAATTTCGATGGTT 57.563 39.130 0.00 0.00 0.00 3.67
4158 6135 5.437191 AAGAGACCCTTAATTTCGATGGT 57.563 39.130 0.00 0.00 32.24 3.55
4159 6136 5.880332 TCAAAGAGACCCTTAATTTCGATGG 59.120 40.000 0.00 0.00 34.00 3.51
4160 6137 6.985188 TCAAAGAGACCCTTAATTTCGATG 57.015 37.500 0.00 0.00 34.00 3.84
4161 6138 7.829211 TGAATCAAAGAGACCCTTAATTTCGAT 59.171 33.333 0.00 0.00 34.00 3.59
4179 6156 7.313740 TCCCATGAAAATCCTTTGAATCAAA 57.686 32.000 8.25 8.25 0.00 2.69
4180 6157 6.931790 TCCCATGAAAATCCTTTGAATCAA 57.068 33.333 0.00 0.00 0.00 2.57
4181 6158 7.499200 AATCCCATGAAAATCCTTTGAATCA 57.501 32.000 0.00 0.00 0.00 2.57
4182 6159 8.797350 AAAATCCCATGAAAATCCTTTGAATC 57.203 30.769 0.00 0.00 0.00 2.52
4184 6161 8.216423 TCAAAAATCCCATGAAAATCCTTTGAA 58.784 29.630 0.00 0.00 0.00 2.69
4187 6164 7.666804 CCTTCAAAAATCCCATGAAAATCCTTT 59.333 33.333 0.00 0.00 33.08 3.11
4188 6165 7.017452 TCCTTCAAAAATCCCATGAAAATCCTT 59.983 33.333 0.00 0.00 33.08 3.36
4189 6166 6.501453 TCCTTCAAAAATCCCATGAAAATCCT 59.499 34.615 0.00 0.00 33.08 3.24
4190 6167 6.710278 TCCTTCAAAAATCCCATGAAAATCC 58.290 36.000 0.00 0.00 33.08 3.01
4191 6168 8.797350 AATCCTTCAAAAATCCCATGAAAATC 57.203 30.769 0.00 0.00 33.08 2.17
4228 6205 7.073265 TCAAACGACGAATGTAGGAAAAATTC 58.927 34.615 0.00 0.00 0.00 2.17
4229 6206 6.961576 TCAAACGACGAATGTAGGAAAAATT 58.038 32.000 0.00 0.00 0.00 1.82
4230 6207 6.548441 TCAAACGACGAATGTAGGAAAAAT 57.452 33.333 0.00 0.00 0.00 1.82
4231 6208 5.987777 TCAAACGACGAATGTAGGAAAAA 57.012 34.783 0.00 0.00 0.00 1.94
4232 6209 6.548441 AATCAAACGACGAATGTAGGAAAA 57.452 33.333 0.00 0.00 0.00 2.29
4233 6210 5.164031 CGAATCAAACGACGAATGTAGGAAA 60.164 40.000 0.00 0.00 0.00 3.13
4234 6211 4.325204 CGAATCAAACGACGAATGTAGGAA 59.675 41.667 0.00 0.00 0.00 3.36
4235 6212 3.855379 CGAATCAAACGACGAATGTAGGA 59.145 43.478 0.00 0.00 0.00 2.94
4236 6213 3.611113 ACGAATCAAACGACGAATGTAGG 59.389 43.478 0.00 0.00 34.70 3.18
4237 6214 4.817987 ACGAATCAAACGACGAATGTAG 57.182 40.909 0.00 0.00 34.70 2.74
4238 6215 4.794762 CCTACGAATCAAACGACGAATGTA 59.205 41.667 0.00 0.00 34.70 2.29
4239 6216 3.611113 CCTACGAATCAAACGACGAATGT 59.389 43.478 0.00 0.00 34.70 2.71
4240 6217 3.855379 TCCTACGAATCAAACGACGAATG 59.145 43.478 0.00 0.00 34.70 2.67
4241 6218 4.100707 TCCTACGAATCAAACGACGAAT 57.899 40.909 0.00 0.00 34.70 3.34
4242 6219 3.557577 TCCTACGAATCAAACGACGAA 57.442 42.857 0.00 0.00 34.70 3.85
4243 6220 3.770263 ATCCTACGAATCAAACGACGA 57.230 42.857 0.00 0.00 34.70 4.20
4244 6221 3.855379 TCAATCCTACGAATCAAACGACG 59.145 43.478 0.00 0.00 34.70 5.12
4245 6222 5.773239 TTCAATCCTACGAATCAAACGAC 57.227 39.130 0.00 0.00 34.70 4.34
4246 6223 5.522460 GGATTCAATCCTACGAATCAAACGA 59.478 40.000 9.43 0.00 46.12 3.85
4247 6224 5.738370 GGATTCAATCCTACGAATCAAACG 58.262 41.667 9.43 0.00 46.12 3.60
4287 6264 9.295825 TGTGAAATGTAGTACAAATGAATCCTT 57.704 29.630 7.16 0.00 0.00 3.36
4288 6265 8.862325 TGTGAAATGTAGTACAAATGAATCCT 57.138 30.769 7.16 0.00 0.00 3.24
4289 6266 8.184192 CCTGTGAAATGTAGTACAAATGAATCC 58.816 37.037 7.16 0.00 0.00 3.01
4290 6267 8.946085 TCCTGTGAAATGTAGTACAAATGAATC 58.054 33.333 7.16 1.09 0.00 2.52
4291 6268 8.862325 TCCTGTGAAATGTAGTACAAATGAAT 57.138 30.769 7.16 0.00 0.00 2.57
4292 6269 8.684386 TTCCTGTGAAATGTAGTACAAATGAA 57.316 30.769 7.16 0.25 0.00 2.57
4293 6270 8.862325 ATTCCTGTGAAATGTAGTACAAATGA 57.138 30.769 7.16 0.00 33.32 2.57
4294 6271 9.559958 GAATTCCTGTGAAATGTAGTACAAATG 57.440 33.333 7.16 0.00 33.32 2.32
4295 6272 9.520515 AGAATTCCTGTGAAATGTAGTACAAAT 57.479 29.630 7.16 0.00 33.32 2.32
4296 6273 8.918202 AGAATTCCTGTGAAATGTAGTACAAA 57.082 30.769 7.16 0.00 33.32 2.83
4298 6275 9.431887 GTTAGAATTCCTGTGAAATGTAGTACA 57.568 33.333 5.24 5.24 33.32 2.90
4299 6276 9.431887 TGTTAGAATTCCTGTGAAATGTAGTAC 57.568 33.333 0.65 0.00 33.32 2.73
4301 6278 9.167311 GATGTTAGAATTCCTGTGAAATGTAGT 57.833 33.333 0.65 0.00 33.32 2.73
4302 6279 8.616076 GGATGTTAGAATTCCTGTGAAATGTAG 58.384 37.037 0.65 0.00 33.32 2.74
4303 6280 8.106462 TGGATGTTAGAATTCCTGTGAAATGTA 58.894 33.333 0.65 0.00 33.32 2.29
4304 6281 6.947733 TGGATGTTAGAATTCCTGTGAAATGT 59.052 34.615 0.65 0.00 33.32 2.71
4305 6282 7.121759 AGTGGATGTTAGAATTCCTGTGAAATG 59.878 37.037 0.65 0.00 33.32 2.32
4306 6283 7.177878 AGTGGATGTTAGAATTCCTGTGAAAT 58.822 34.615 0.65 0.00 33.32 2.17
4307 6284 6.542821 AGTGGATGTTAGAATTCCTGTGAAA 58.457 36.000 0.65 0.00 33.32 2.69
4308 6285 6.126863 AGTGGATGTTAGAATTCCTGTGAA 57.873 37.500 0.65 0.00 34.33 3.18
4309 6286 5.248248 TGAGTGGATGTTAGAATTCCTGTGA 59.752 40.000 0.65 0.00 0.00 3.58
4310 6287 5.491070 TGAGTGGATGTTAGAATTCCTGTG 58.509 41.667 0.65 0.00 0.00 3.66
4311 6288 5.762179 TGAGTGGATGTTAGAATTCCTGT 57.238 39.130 0.65 0.00 0.00 4.00
4312 6289 6.127897 GGTTTGAGTGGATGTTAGAATTCCTG 60.128 42.308 0.65 0.00 0.00 3.86
4313 6290 5.946377 GGTTTGAGTGGATGTTAGAATTCCT 59.054 40.000 0.65 0.00 0.00 3.36
4314 6291 5.946377 AGGTTTGAGTGGATGTTAGAATTCC 59.054 40.000 0.65 0.00 0.00 3.01
4315 6292 6.881602 AGAGGTTTGAGTGGATGTTAGAATTC 59.118 38.462 0.00 0.00 0.00 2.17
4316 6293 6.784031 AGAGGTTTGAGTGGATGTTAGAATT 58.216 36.000 0.00 0.00 0.00 2.17
4317 6294 6.380079 AGAGGTTTGAGTGGATGTTAGAAT 57.620 37.500 0.00 0.00 0.00 2.40
4318 6295 5.825593 AGAGGTTTGAGTGGATGTTAGAA 57.174 39.130 0.00 0.00 0.00 2.10
4319 6296 5.513094 CCAAGAGGTTTGAGTGGATGTTAGA 60.513 44.000 0.00 0.00 0.00 2.10
4320 6297 4.697352 CCAAGAGGTTTGAGTGGATGTTAG 59.303 45.833 0.00 0.00 0.00 2.34
4321 6298 4.349636 TCCAAGAGGTTTGAGTGGATGTTA 59.650 41.667 0.00 0.00 33.43 2.41
4322 6299 3.138283 TCCAAGAGGTTTGAGTGGATGTT 59.862 43.478 0.00 0.00 33.43 2.71
4323 6300 2.711009 TCCAAGAGGTTTGAGTGGATGT 59.289 45.455 0.00 0.00 33.43 3.06
4324 6301 3.423539 TCCAAGAGGTTTGAGTGGATG 57.576 47.619 0.00 0.00 33.43 3.51
4325 6302 3.652869 TCTTCCAAGAGGTTTGAGTGGAT 59.347 43.478 0.00 0.00 38.16 3.41
4326 6303 3.045634 TCTTCCAAGAGGTTTGAGTGGA 58.954 45.455 0.00 0.00 36.59 4.02
4327 6304 3.492102 TCTTCCAAGAGGTTTGAGTGG 57.508 47.619 0.00 0.00 35.89 4.00
4328 6305 5.048434 GGATTTCTTCCAAGAGGTTTGAGTG 60.048 44.000 0.00 0.00 44.74 3.51
4329 6306 5.073428 GGATTTCTTCCAAGAGGTTTGAGT 58.927 41.667 0.00 0.00 44.74 3.41
4330 6307 5.635417 GGATTTCTTCCAAGAGGTTTGAG 57.365 43.478 0.00 0.00 44.74 3.02
4342 6319 4.988540 CGGGAAAAACAAAGGATTTCTTCC 59.011 41.667 0.00 0.00 45.85 3.46
4343 6320 5.462068 CACGGGAAAAACAAAGGATTTCTTC 59.538 40.000 0.00 0.00 35.03 2.87
4344 6321 5.128008 TCACGGGAAAAACAAAGGATTTCTT 59.872 36.000 0.00 0.00 35.03 2.52
4345 6322 4.647399 TCACGGGAAAAACAAAGGATTTCT 59.353 37.500 0.00 0.00 35.03 2.52
4346 6323 4.743151 GTCACGGGAAAAACAAAGGATTTC 59.257 41.667 0.00 0.00 35.03 2.17
4347 6324 4.160626 TGTCACGGGAAAAACAAAGGATTT 59.839 37.500 0.00 0.00 40.26 2.17
4348 6325 3.702045 TGTCACGGGAAAAACAAAGGATT 59.298 39.130 0.00 0.00 0.00 3.01
4349 6326 3.067601 GTGTCACGGGAAAAACAAAGGAT 59.932 43.478 0.00 0.00 0.00 3.24
4350 6327 2.424246 GTGTCACGGGAAAAACAAAGGA 59.576 45.455 0.00 0.00 0.00 3.36
4351 6328 2.164624 TGTGTCACGGGAAAAACAAAGG 59.835 45.455 0.00 0.00 0.00 3.11
4352 6329 3.495670 TGTGTCACGGGAAAAACAAAG 57.504 42.857 0.00 0.00 0.00 2.77
4353 6330 3.936372 TTGTGTCACGGGAAAAACAAA 57.064 38.095 8.85 0.00 0.00 2.83
4354 6331 3.444034 TGATTGTGTCACGGGAAAAACAA 59.556 39.130 12.58 12.58 31.63 2.83
4355 6332 3.017442 TGATTGTGTCACGGGAAAAACA 58.983 40.909 0.00 0.00 0.00 2.83
4356 6333 3.701532 TGATTGTGTCACGGGAAAAAC 57.298 42.857 0.00 0.00 0.00 2.43
4357 6334 4.082190 TGTTTGATTGTGTCACGGGAAAAA 60.082 37.500 0.00 0.00 36.32 1.94
4358 6335 3.444034 TGTTTGATTGTGTCACGGGAAAA 59.556 39.130 0.00 0.00 36.32 2.29
4359 6336 3.017442 TGTTTGATTGTGTCACGGGAAA 58.983 40.909 0.00 0.00 36.32 3.13
4360 6337 2.644676 TGTTTGATTGTGTCACGGGAA 58.355 42.857 0.00 0.00 36.32 3.97
4361 6338 2.333688 TGTTTGATTGTGTCACGGGA 57.666 45.000 0.00 0.00 36.32 5.14
4362 6339 3.112580 GTTTGTTTGATTGTGTCACGGG 58.887 45.455 0.00 0.00 36.32 5.28
4363 6340 3.545873 GTGTTTGTTTGATTGTGTCACGG 59.454 43.478 0.00 0.00 36.32 4.94
4364 6341 4.162072 TGTGTTTGTTTGATTGTGTCACG 58.838 39.130 0.00 0.00 36.32 4.35
4365 6342 6.459257 TTTGTGTTTGTTTGATTGTGTCAC 57.541 33.333 0.00 0.00 36.32 3.67
4366 6343 6.312426 GGATTTGTGTTTGTTTGATTGTGTCA 59.688 34.615 0.00 0.00 34.25 3.58
4367 6344 6.238076 GGGATTTGTGTTTGTTTGATTGTGTC 60.238 38.462 0.00 0.00 0.00 3.67
4368 6345 5.584251 GGGATTTGTGTTTGTTTGATTGTGT 59.416 36.000 0.00 0.00 0.00 3.72
4369 6346 5.583854 TGGGATTTGTGTTTGTTTGATTGTG 59.416 36.000 0.00 0.00 0.00 3.33
4370 6347 5.738909 TGGGATTTGTGTTTGTTTGATTGT 58.261 33.333 0.00 0.00 0.00 2.71
4371 6348 6.864360 ATGGGATTTGTGTTTGTTTGATTG 57.136 33.333 0.00 0.00 0.00 2.67
4372 6349 7.160726 CCTATGGGATTTGTGTTTGTTTGATT 58.839 34.615 0.00 0.00 33.58 2.57
4373 6350 6.700352 CCTATGGGATTTGTGTTTGTTTGAT 58.300 36.000 0.00 0.00 33.58 2.57
4374 6351 6.095432 CCTATGGGATTTGTGTTTGTTTGA 57.905 37.500 0.00 0.00 33.58 2.69
4392 6369 3.087031 GCATGTCCATTGGATCCCTATG 58.913 50.000 9.90 12.60 36.71 2.23
4393 6370 2.042162 GGCATGTCCATTGGATCCCTAT 59.958 50.000 9.90 0.00 32.73 2.57
4394 6371 1.425066 GGCATGTCCATTGGATCCCTA 59.575 52.381 9.90 0.00 32.73 3.53
4395 6372 0.186873 GGCATGTCCATTGGATCCCT 59.813 55.000 9.90 0.00 32.73 4.20
4396 6373 0.106066 TGGCATGTCCATTGGATCCC 60.106 55.000 9.90 7.65 40.72 3.85
4397 6374 3.518766 TGGCATGTCCATTGGATCC 57.481 52.632 9.01 4.20 40.72 3.36
4406 6383 0.109342 AGGATCGGAATGGCATGTCC 59.891 55.000 0.00 9.48 0.00 4.02
4407 6384 2.224281 TGTAGGATCGGAATGGCATGTC 60.224 50.000 0.00 0.82 0.00 3.06
4408 6385 1.768275 TGTAGGATCGGAATGGCATGT 59.232 47.619 0.00 0.00 0.00 3.21
4409 6386 2.549064 TGTAGGATCGGAATGGCATG 57.451 50.000 0.00 0.00 0.00 4.06
4410 6387 3.795688 AATGTAGGATCGGAATGGCAT 57.204 42.857 0.00 0.00 0.00 4.40
4411 6388 3.576078 AAATGTAGGATCGGAATGGCA 57.424 42.857 0.00 0.00 0.00 4.92
4412 6389 3.253432 GGAAAATGTAGGATCGGAATGGC 59.747 47.826 0.00 0.00 0.00 4.40
4413 6390 3.821033 GGGAAAATGTAGGATCGGAATGG 59.179 47.826 0.00 0.00 0.00 3.16
4414 6391 4.718961 AGGGAAAATGTAGGATCGGAATG 58.281 43.478 0.00 0.00 0.00 2.67
4415 6392 6.704056 ATAGGGAAAATGTAGGATCGGAAT 57.296 37.500 0.00 0.00 0.00 3.01
4416 6393 6.329197 AGAATAGGGAAAATGTAGGATCGGAA 59.671 38.462 0.00 0.00 0.00 4.30
4417 6394 5.844516 AGAATAGGGAAAATGTAGGATCGGA 59.155 40.000 0.00 0.00 0.00 4.55
4418 6395 6.115448 AGAATAGGGAAAATGTAGGATCGG 57.885 41.667 0.00 0.00 0.00 4.18
4419 6396 6.992715 ACAAGAATAGGGAAAATGTAGGATCG 59.007 38.462 0.00 0.00 0.00 3.69
4420 6397 7.445707 GGACAAGAATAGGGAAAATGTAGGATC 59.554 40.741 0.00 0.00 0.00 3.36
4421 6398 7.129504 AGGACAAGAATAGGGAAAATGTAGGAT 59.870 37.037 0.00 0.00 0.00 3.24
4422 6399 6.447084 AGGACAAGAATAGGGAAAATGTAGGA 59.553 38.462 0.00 0.00 0.00 2.94
4423 6400 6.663734 AGGACAAGAATAGGGAAAATGTAGG 58.336 40.000 0.00 0.00 0.00 3.18
4424 6401 8.581253 AAAGGACAAGAATAGGGAAAATGTAG 57.419 34.615 0.00 0.00 0.00 2.74
4425 6402 8.802267 CAAAAGGACAAGAATAGGGAAAATGTA 58.198 33.333 0.00 0.00 0.00 2.29
4426 6403 7.670364 CAAAAGGACAAGAATAGGGAAAATGT 58.330 34.615 0.00 0.00 0.00 2.71
4427 6404 6.591448 GCAAAAGGACAAGAATAGGGAAAATG 59.409 38.462 0.00 0.00 0.00 2.32
4428 6405 6.269769 TGCAAAAGGACAAGAATAGGGAAAAT 59.730 34.615 0.00 0.00 0.00 1.82
4429 6406 5.600484 TGCAAAAGGACAAGAATAGGGAAAA 59.400 36.000 0.00 0.00 0.00 2.29
4430 6407 5.144100 TGCAAAAGGACAAGAATAGGGAAA 58.856 37.500 0.00 0.00 0.00 3.13
4431 6408 4.735369 TGCAAAAGGACAAGAATAGGGAA 58.265 39.130 0.00 0.00 0.00 3.97
4432 6409 4.380843 TGCAAAAGGACAAGAATAGGGA 57.619 40.909 0.00 0.00 0.00 4.20
4433 6410 5.394553 GGATTGCAAAAGGACAAGAATAGGG 60.395 44.000 1.71 0.00 0.00 3.53
4434 6411 5.420104 AGGATTGCAAAAGGACAAGAATAGG 59.580 40.000 1.71 0.00 0.00 2.57
4435 6412 6.521151 AGGATTGCAAAAGGACAAGAATAG 57.479 37.500 1.71 0.00 0.00 1.73
4436 6413 7.833682 TCATAGGATTGCAAAAGGACAAGAATA 59.166 33.333 1.71 0.00 0.00 1.75
4437 6414 6.664816 TCATAGGATTGCAAAAGGACAAGAAT 59.335 34.615 1.71 0.00 0.00 2.40
4438 6415 6.009589 TCATAGGATTGCAAAAGGACAAGAA 58.990 36.000 1.71 0.00 0.00 2.52
4439 6416 5.569355 TCATAGGATTGCAAAAGGACAAGA 58.431 37.500 1.71 0.00 0.00 3.02
4440 6417 5.902613 TCATAGGATTGCAAAAGGACAAG 57.097 39.130 1.71 0.00 0.00 3.16
4441 6418 6.436847 TGATTCATAGGATTGCAAAAGGACAA 59.563 34.615 1.71 0.00 0.00 3.18
4442 6419 5.951148 TGATTCATAGGATTGCAAAAGGACA 59.049 36.000 1.71 0.00 0.00 4.02
4443 6420 6.455360 TGATTCATAGGATTGCAAAAGGAC 57.545 37.500 1.71 0.00 0.00 3.85
4444 6421 7.396907 TCTTTGATTCATAGGATTGCAAAAGGA 59.603 33.333 1.71 0.00 0.00 3.36
4445 6422 7.549839 TCTTTGATTCATAGGATTGCAAAAGG 58.450 34.615 1.71 0.00 0.00 3.11
4446 6423 7.705325 CCTCTTTGATTCATAGGATTGCAAAAG 59.295 37.037 1.71 0.00 0.00 2.27
4447 6424 7.549839 CCTCTTTGATTCATAGGATTGCAAAA 58.450 34.615 1.71 0.00 0.00 2.44
4448 6425 6.406177 GCCTCTTTGATTCATAGGATTGCAAA 60.406 38.462 1.71 0.00 0.00 3.68
4449 6426 5.068198 GCCTCTTTGATTCATAGGATTGCAA 59.932 40.000 0.00 0.00 0.00 4.08
4450 6427 4.581824 GCCTCTTTGATTCATAGGATTGCA 59.418 41.667 12.17 0.00 0.00 4.08
4451 6428 4.022503 GGCCTCTTTGATTCATAGGATTGC 60.023 45.833 12.17 6.85 0.00 3.56
4452 6429 4.522022 GGGCCTCTTTGATTCATAGGATTG 59.478 45.833 0.84 0.00 0.00 2.67
4453 6430 4.418190 AGGGCCTCTTTGATTCATAGGATT 59.582 41.667 0.00 0.00 0.00 3.01
4454 6431 3.986134 AGGGCCTCTTTGATTCATAGGAT 59.014 43.478 0.00 0.00 0.00 3.24
4455 6432 3.397527 AGGGCCTCTTTGATTCATAGGA 58.602 45.455 0.00 0.85 0.00 2.94
4456 6433 3.872459 AGGGCCTCTTTGATTCATAGG 57.128 47.619 0.00 5.38 0.00 2.57
4457 6434 5.163152 ACCTTAGGGCCTCTTTGATTCATAG 60.163 44.000 10.74 0.00 35.63 2.23
4458 6435 4.726825 ACCTTAGGGCCTCTTTGATTCATA 59.273 41.667 10.74 0.00 35.63 2.15
4459 6436 3.529319 ACCTTAGGGCCTCTTTGATTCAT 59.471 43.478 10.74 0.00 35.63 2.57
4460 6437 2.919602 ACCTTAGGGCCTCTTTGATTCA 59.080 45.455 10.74 0.00 35.63 2.57
4461 6438 3.282885 CACCTTAGGGCCTCTTTGATTC 58.717 50.000 10.74 0.00 35.63 2.52
4462 6439 2.024941 CCACCTTAGGGCCTCTTTGATT 60.025 50.000 10.74 0.00 35.63 2.57
4463 6440 1.566231 CCACCTTAGGGCCTCTTTGAT 59.434 52.381 10.74 0.00 35.63 2.57
4464 6441 0.991920 CCACCTTAGGGCCTCTTTGA 59.008 55.000 10.74 0.00 35.63 2.69
4465 6442 0.991920 TCCACCTTAGGGCCTCTTTG 59.008 55.000 10.74 3.07 35.63 2.77
4466 6443 1.354705 GTTCCACCTTAGGGCCTCTTT 59.645 52.381 10.74 0.00 35.63 2.52
4467 6444 0.992695 GTTCCACCTTAGGGCCTCTT 59.007 55.000 10.74 0.00 35.63 2.85
4468 6445 0.119358 AGTTCCACCTTAGGGCCTCT 59.881 55.000 10.74 0.00 35.63 3.69
4469 6446 1.485480 GTAGTTCCACCTTAGGGCCTC 59.515 57.143 10.74 0.00 35.63 4.70
4470 6447 1.203389 TGTAGTTCCACCTTAGGGCCT 60.203 52.381 12.58 12.58 35.63 5.19
4471 6448 1.282382 TGTAGTTCCACCTTAGGGCC 58.718 55.000 2.32 0.00 35.63 5.80
4472 6449 2.919228 CATGTAGTTCCACCTTAGGGC 58.081 52.381 2.32 0.00 35.63 5.19
4473 6450 2.741878 CGCATGTAGTTCCACCTTAGGG 60.742 54.545 2.32 0.00 38.88 3.53
4474 6451 2.167693 TCGCATGTAGTTCCACCTTAGG 59.832 50.000 0.00 0.00 0.00 2.69
4475 6452 3.520290 TCGCATGTAGTTCCACCTTAG 57.480 47.619 0.00 0.00 0.00 2.18
4476 6453 3.704566 AGATCGCATGTAGTTCCACCTTA 59.295 43.478 0.00 0.00 0.00 2.69
4477 6454 2.501723 AGATCGCATGTAGTTCCACCTT 59.498 45.455 0.00 0.00 0.00 3.50
4478 6455 2.101582 GAGATCGCATGTAGTTCCACCT 59.898 50.000 0.00 0.00 0.00 4.00
4479 6456 2.101582 AGAGATCGCATGTAGTTCCACC 59.898 50.000 0.00 0.00 0.00 4.61
4480 6457 3.444703 AGAGATCGCATGTAGTTCCAC 57.555 47.619 0.00 0.00 0.00 4.02
4481 6458 3.570125 CCTAGAGATCGCATGTAGTTCCA 59.430 47.826 0.00 0.00 0.00 3.53
4482 6459 3.821600 TCCTAGAGATCGCATGTAGTTCC 59.178 47.826 0.00 0.00 0.00 3.62
4483 6460 4.517453 ACTCCTAGAGATCGCATGTAGTTC 59.483 45.833 0.00 0.00 33.32 3.01
4484 6461 4.465886 ACTCCTAGAGATCGCATGTAGTT 58.534 43.478 0.00 0.00 33.32 2.24
4485 6462 4.093472 ACTCCTAGAGATCGCATGTAGT 57.907 45.455 0.00 0.00 33.32 2.73
4486 6463 5.123186 CCTAACTCCTAGAGATCGCATGTAG 59.877 48.000 0.00 0.00 33.32 2.74
4487 6464 5.004448 CCTAACTCCTAGAGATCGCATGTA 58.996 45.833 0.00 0.00 33.32 2.29
4488 6465 3.823873 CCTAACTCCTAGAGATCGCATGT 59.176 47.826 0.00 0.00 33.32 3.21
4489 6466 3.192422 CCCTAACTCCTAGAGATCGCATG 59.808 52.174 0.00 0.00 33.32 4.06
4490 6467 3.181427 ACCCTAACTCCTAGAGATCGCAT 60.181 47.826 0.00 0.00 33.32 4.73
4491 6468 2.175069 ACCCTAACTCCTAGAGATCGCA 59.825 50.000 0.00 0.00 33.32 5.10
4492 6469 2.554893 CACCCTAACTCCTAGAGATCGC 59.445 54.545 0.00 0.00 33.32 4.58
4493 6470 3.822940 ACACCCTAACTCCTAGAGATCG 58.177 50.000 0.00 0.00 33.32 3.69
4494 6471 4.957327 ACAACACCCTAACTCCTAGAGATC 59.043 45.833 0.00 0.00 33.32 2.75
4495 6472 4.949121 ACAACACCCTAACTCCTAGAGAT 58.051 43.478 0.00 0.00 33.32 2.75
4496 6473 4.399483 ACAACACCCTAACTCCTAGAGA 57.601 45.455 0.00 0.00 33.32 3.10
4497 6474 5.657302 ACATACAACACCCTAACTCCTAGAG 59.343 44.000 0.00 0.00 35.52 2.43
4498 6475 5.586877 ACATACAACACCCTAACTCCTAGA 58.413 41.667 0.00 0.00 0.00 2.43
4499 6476 5.163437 GGACATACAACACCCTAACTCCTAG 60.163 48.000 0.00 0.00 0.00 3.02
4500 6477 4.713321 GGACATACAACACCCTAACTCCTA 59.287 45.833 0.00 0.00 0.00 2.94
4501 6478 3.518303 GGACATACAACACCCTAACTCCT 59.482 47.826 0.00 0.00 0.00 3.69
4502 6479 3.677976 CGGACATACAACACCCTAACTCC 60.678 52.174 0.00 0.00 0.00 3.85
4503 6480 3.518590 CGGACATACAACACCCTAACTC 58.481 50.000 0.00 0.00 0.00 3.01
4504 6481 2.354403 GCGGACATACAACACCCTAACT 60.354 50.000 0.00 0.00 0.00 2.24
4505 6482 2.004733 GCGGACATACAACACCCTAAC 58.995 52.381 0.00 0.00 0.00 2.34
4506 6483 1.404449 CGCGGACATACAACACCCTAA 60.404 52.381 0.00 0.00 0.00 2.69
4507 6484 0.173935 CGCGGACATACAACACCCTA 59.826 55.000 0.00 0.00 0.00 3.53
4508 6485 1.079405 CGCGGACATACAACACCCT 60.079 57.895 0.00 0.00 0.00 4.34
4509 6486 2.746803 GCGCGGACATACAACACCC 61.747 63.158 8.83 0.00 0.00 4.61
4510 6487 2.782615 GCGCGGACATACAACACC 59.217 61.111 8.83 0.00 0.00 4.16
4511 6488 2.274834 GACGCGCGGACATACAACAC 62.275 60.000 35.22 6.21 0.00 3.32
4512 6489 2.048970 ACGCGCGGACATACAACA 60.049 55.556 35.22 0.00 0.00 3.33
4513 6490 2.693285 GACGCGCGGACATACAAC 59.307 61.111 35.22 9.31 0.00 3.32
4525 6502 1.193874 GTAGTTTGGACTTTGGACGCG 59.806 52.381 3.53 3.53 37.33 6.01
4526 6503 1.534163 GGTAGTTTGGACTTTGGACGC 59.466 52.381 0.00 0.00 37.33 5.19
4533 6510 0.323957 GCGAGGGGTAGTTTGGACTT 59.676 55.000 0.00 0.00 37.33 3.01
4534 6511 1.551019 GGCGAGGGGTAGTTTGGACT 61.551 60.000 0.00 0.00 39.97 3.85
4620 6597 8.621286 GTGTAAAGGAAGATGAGAAAAGTTTCA 58.379 33.333 6.56 0.00 39.61 2.69
4621 6598 8.621286 TGTGTAAAGGAAGATGAGAAAAGTTTC 58.379 33.333 0.00 0.00 37.45 2.78
4792 6775 2.267426 CGCGTCATCAACATACAAGGA 58.733 47.619 0.00 0.00 0.00 3.36
4797 6780 1.087202 TGGCCGCGTCATCAACATAC 61.087 55.000 4.92 0.00 0.00 2.39
4799 6782 1.439353 GATGGCCGCGTCATCAACAT 61.439 55.000 25.02 11.26 43.31 2.71
4801 6784 1.369091 AAGATGGCCGCGTCATCAAC 61.369 55.000 28.79 12.75 45.87 3.18
4831 6869 0.667792 GAGGAGACGTCTTGTGTGGC 60.668 60.000 21.08 4.47 0.00 5.01
4843 6881 0.174617 CTCGCCAAAGGAGAGGAGAC 59.825 60.000 8.69 0.00 44.10 3.36
4848 6906 0.390472 GTGACCTCGCCAAAGGAGAG 60.390 60.000 9.49 9.49 46.69 3.20
4849 6907 1.671742 GTGACCTCGCCAAAGGAGA 59.328 57.895 1.66 0.00 38.87 3.71
4858 6916 2.743928 CAAGCCTGGTGACCTCGC 60.744 66.667 2.11 4.12 0.00 5.03
4922 6980 8.802267 CCACCAAGGAATTTGTCTAGATTTAAA 58.198 33.333 0.00 0.00 41.22 1.52
4938 6996 4.492604 CGAAAGGCCACCAAGGAA 57.507 55.556 5.01 0.00 41.22 3.36
4950 7008 1.353103 GATGTCGCATGGCCGAAAG 59.647 57.895 0.00 0.00 39.17 2.62
4953 7011 2.923426 GAAGGATGTCGCATGGCCGA 62.923 60.000 0.00 0.00 34.40 5.54
4976 7034 4.564821 GGTGAGGGTGCTAACATACTTCAA 60.565 45.833 0.00 0.00 0.00 2.69
4985 7043 0.322456 TGCATGGTGAGGGTGCTAAC 60.322 55.000 0.00 0.00 39.52 2.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.