>input_sequence_25135
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-------------------------------------ATGAGGAAGATGTTCATGGTGGCGGGCGCTGCTTTGTTGCTAG
CCGCCGCCGCCGTCTGCTCCTCGGCGGACGGCGAGAGCGAGGCTCGCCGTCGCGCAGTCCCCGCGGTGTACGTGTTCGGC
GACTCCCTCGTGGACGTCGGCAACAACGACTTCCTGCCGCCGCCGGCGCCCAGGGCGGGTTTCCCCTGCGGCGTCGACCT
GCCGCGCGCGATCCCCGGCGGACGGACCGGGAGGTTTACCAACGGCTACAACCTGGCCGACATCATCGGTAAGTCTGAAG
ATAATTTTAGTTGTGCAGACCTTGTGCATTCGCTGTGCCTATGCTTCACACTGCT-------GTTAGCCCACAGATCTGA
AGCTAATTTAGTCTGATCCGGTTA---------------CCGATTTAG------------AGTTGCCAAGCTGCTTGAGA
TGATGCAAATTAAACGATGCCTTCAGATATTTTGAGTGCCAGCTCGCTCAAATCTTTGCCAAAACTTACAGG--------
------------------------------------------------AAATTACAGACAGGACCTCATATAAAGTGGTG
GGCAATAAAGTTTACAAACACGTGGTCATATAAGCGGAAAATTACATATACATCCTGGGTTCTTGCAAACAGGACTCTGA
ATGATCACAGATTAAAGATTGCAGTTGGGTCTAAATCTGCTCAAGAATGGAACCAATCTCGCCAGCTGGGGACGAAACCA
CTTTGTCTGATGAGACCTCCACAGACCACAGTAGAATATGCAATGGACTCCACCCTGAAGCAGCACTGCCTCTAACTCTG
CCATCATGTCCGGGAGGCATAAACTTGACCGCTCTTCGGCCATAGAATACAACGGCTCGTCGGAGGAGACCGCCCTTCGA
CCATCACGTGGGCATCATAGCTCCTCCAAAACCATTGTTGTTGATGCGCACGGTCCCCATTTGTAGCACCCAGATCTCAA
TACAAATGTGCATGATACTCA-TTATGGTACTTCCAACTACAAGAGGTCTAATAGCAATTCGCTTGAAATGCTGCATACT
GTCTTTCCAAATGTTGCAGTTATTACCATTTTATTTAGAAATTCTATGTGTTTATTTCCGTTCCAATTTGGTAATACTAA
TACATACATTAC-TTATGTATATATACACAGCACAATGTGTGGGGTTTGACATGAGCCCCTTAGCTTACCTCTCCTTGAC
GCCGCAAACGATCCTTGACCTCCTGAGCGGCCGCGTTGGGGCCAATTATGCTTCCGGTGGATCAGGAATCCTTGACGACA
CTGTATGTATGTACAAATGTACATAATTTAGAACCTGCACTTACATCACTCGAGTTACTATCCACACACACAGTATGATT
TTGCCCAATCAACACCTCTTATTTCTGCACATATCTTAGTTCGTTATGTTTATTAGCAGTGCAAATTAGACCCTGAAGTC
TGAAGAGGGAGAGTACTTGTTGTGAATTAAGCTTGATTGACATTTACTATCTCGGTTTCAAGGTAGATGATGTGCTATAA
AGCATGCAGTAAAGCTTCTCTAACTTTGACATTCGAATGTAAGAATATTATTGTGACTGGTCAAATGGAAACAATACCAT
CAGGATTTTCATAAAAAAATATGTTATGATTCTCAAATTTTAATTTTATTGCTGACATATCCTTATGAACCAAATTAACT
GCAGTTTAGAGAATGTGTCCATGTTTTCAGTTACATGTGACCTCTGCCTAACAAAATGTAGGGGAACGGCACGATCACCC
TCCGAGAACAGATCAAGCTGTTTGCAGACACCAAGGTGACCATGATCGAGGCCAACAAGCTGGGAAATAATAGGGTCAAT
CGCTTGCTGTCCCGGTCCCTATTCCTCATCAGCACCGCAGGCA-CGATTTCTCGGCATTTAGTGACGGTAGGGCAACCAG
AAGTGATGCATCGGCCTACATCGCCAAAACGGTCACCACCTACCTCAAGCACATCAAGGTAGGTTCACGTGAGCAACAGG
AGGT-TGAAATCTTGTCTGGTATTTCGGGAGATCTCA-----------------GTGACATTTGATTTCAGAT-------
---------------------------------------AAACCTTGTCAGTATGTCCATCTCAATGTCCAGGATGTTAT
TTTAACTTGACTGTTTTCA-TAACATTTTGCCAGAATAGCAAAAGAACCACACATGTTTAAA------------------
--TGAAATCTCTTTGACCCTCATAATTTCAAACGCACGGATGCACACACACAATATGTGGGCAGGAGTTGTACAGGCTGG
GGGCACGGAGGCTAGGACTGCTGGACGCGCTGCCCATCGGATGCTTGCCGGGCTGCAGAATTTCCTTTGGACATGATGGC
ACGTGTGACACCACTGCCAACTCTCTGGCCCGGCGGTTCAATGCCCTACTCCGGCTTGAAATGGCCAGCGCCACGGCAGC
TTCGATGCCAGGCATGGAGTACTCCATCGCCAGCATCTACGGCATCTTCTCCGACATGATCACCAACCCGGAGCTGGACA
ACGGTTAGCTCTCTTTGCCTGAGT-TCGATGCAACAAGGGTCAATTTCTTTCTTCAAAATTTCTATTACAAGGTCTGCGC
AATCAAAAATATATTGGAGTAAAATG------------------------------------------------------
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-----------------------------------------------------------------GAATGAAAACATTCG
GCTAATCTATACACGGTTACCTCTGAGCCACCAATCGGTTACTGGAACACTGGATCGTTCACCGATCTCTGTGAAAGTCA
AACTGTTTCATGTAATAATTCTTCTGCATTCCTAACGGCGCGCCGTCCGGTTGTTCTTACCTAATGAACCGTTGGATC-G
TATCATCAGGACTGCAGGAGGCGACTAGCGCGTGCTGCGGAGGAGGGAGGCTCAACGCGGAGCTCAACTGCTCGGCGAGC
TCGAACCTTTGCACCGACCGCGACGGCTACGTGTTCTGGGACAAGGTCCATGGGACGCAGGCCGCCTACCAGCGAGCCGT
TGCCGCCATGTTCGACGGCGCGGCGGCGACAAAGTTCACGGAGCCCGTCAGCTTCGGGCAGTTGATCACCGGGAAACAGG
CAGCGCCGGTTGCCGTGTTAGATAAACTGGAGCGTCCGTGCGTGGATTTGGAAGCTGTGATCTAG---------------
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>chr5B_1_TraesCS5B01G089700
ATCCTAACCTTTACCATGCGTAAATGCTAGCAAAAAGAAC-ACTAATGGCATATTTTAATTAAATC-----AAAAAATAT
GTGTAATTTTAGGCTCTCATTTGTGGAGGGAAAAAAAATGAAAAAAGGGTTAAGCTTTGTTTCTGAAACCAAAAAATATT
ACACAAACAAACTATGTTTTGTCATGCTGGCGGTAGCTGATCCACCTCCACACCTCCTCCCTCTGCCAGATTCAAAGCTC
GCGCGTCTGGCGATGCC-------------TGGGGAAGGTGTAGCTCCATCCCCCTTTCTTGGTTCTGACTATCGTTTTG
TCTGCCTCATCTCCGAATCATGATCTGGCGGTTATGGGTTGCTCAGGCTCGGCCCAAGGCAAAATCCCTGCTCGGATTGT
CGATGCTAGCAGTGACGACACTCGCGGGTGTCGTTCTACCTTCTTGCAGGCGCTGCCAGGGCCTTTATCTGCGCCCTCTT
CAAGCTTAGAGGAAAGTCTAGGTACGGTTCGAAGAACCGGCTGGCGACGACTCCACGACGTCGTTTCCCTTCTGAAGACG
TCATCTTGCTTGCTCGCGGTGTCCGTCGTGTTGGTTGTGTTTTATCATCTGTTCGTGCCAAGCATCCCTTGTCCCTCTAT
CTATGTCATATGTTGTACCTTTCTTTGAACTCATTTTAATTC--------------------------------------
-----------TTTTTTCGTCGAGGCAACGGTGCCGTGAGTGCTCAAGTGGGCCTCCAAGCCCATTTTTCTTCGGTCGTC
A-------AAGATCTGCTCGTCTTGGCACAGCCA----------------------------------------------
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------------AAACATGTTTACCAAAAAAGAAAAAAAGGAAA------------------------------------
---------------------------------------------------------AATCATGTGCACGGAATTGCACT
GTCCCTAC---AAGTGCGCATGGCTTACGTCAGTCAGCCACGTTACGTGTCTGCTCCTCCACCACAAAGGCATGTCGACA
GGGCAACGACTCAC----ATTAATCAAG--ATGATGATGTGTAGGCATGGAACTACCCTCAGCTGATGATCAGCTAG-TG
CTCAGTCACCGCCCGATCCATGGG-TCTACCTGTACGATGAGGAAGATGTTCATGGTGGCGGGCGCTGCTTTGTTGCTAG
CCGCCGCCGCCGTCTGCTCCTCGGCGGACGGCGAGAGCGAGGCTCGCCGTCGCGCAGTCCCCGCGGTGTACGTGTTCGGC
GACTCCCTCGTGGACGTCGGCAACAACGACTTCCTGCCGCCGCCGGCGCCCAGGGCGGGTTTCCCCTGCGGCGTCGACCT
GCCGCGCGCGATCCCCGGCGGACGGACCGGGAGGTTTACCAACGGCTACAACCTGGCCGACATCATCGGTAAGTCTGAAG
ATAATTTTAGTTGTGCAGACCTTGTGCATTCGCTGTGCCTATGCTTCACACTGCT-------GTTAGCCCACAGATCTGA
AGCTAATTTAGTCTGATCCGGTTA---------------CCGATTTAG------------AGTTGCCAAGCTGCTTGAGA
TGATGCAAATTAAACGATGCCTTCAGATATTTTGAGTGCCAGCTCGCTCAAATCTTTGCCAAAACTTACAGG--------
------------------------------------------------AAATTACAGACAGGACCTCATATAAAGTGGTG
GGCAATAAAGTTTACAAACACGTGGTCATATAAGCGGAAAATTACATATACATCCTGGGTTCTTGCAAACAGGACTCTGA
ATGATCACAGATTAAAGATTGCAGTTGGGTCTAAATCTGCTCAAGAATGGAACCAATCTCGCCAGCTGGGGACGAAACCA
CTTTGTCTGATGAGACCTCCACAGACCACAGTAGAATATGCAATGGACTCCACCCTGAAGCAGCACTGCCTCTAACTCTG
CCATCATGTCCGGGAGGCATAAACTTGACCGCTCTTCGGCCATAGAATACAACGGCTCGTCGGAGGAGACCGCCCTTCGA
CCATCACGTGGGCATCATAGCTCCTCCAAAACCATTGTTGTTGATGCGCACGGTCCCCATTTGTAGCACCCAGATCTCAA
TACAAATGTGCATGATACTCA-TTATGGTACTTCCAACTACAAGAGGTCTAATAGCAATTCGCTTGAAATGCTGCATACT
GTCTTTCCAAATGTTGCAGTTATTACCATTTTATTTAGAAATTCTATGTGTTTATTTCCGTTCCAATTTGGTAATACTAA
TACATACATTAC-TTATGTATATATACACAGCACAATGTGTGGGGTTTGACATGAGCCCCTTAGCTTACCTCTCCTTGAC
GCCGCAAACGATCCTTGACCTCCTGAGCGGCCGCGTTGGGGCCAATTATGCTTCCGGTGGATCAGGAATCCTTGACGACA
CTGTATGTATGTACAAATGTACATAATTTAGAACCTGCACTTACATCACTCGAGTTACTATCCACACACACAGTATGATT
TTGCCCAATCAACACCTCTTATTTCTGCACATATCTTAGTTCGTTATGTTTATTAGCAGTGCAAATTAGACCCTGAAGTC
TGAAGAGGGAGAGTACTTGTTGTGAATTAAGCTTGATTGACATTTACTATCTCGGTTTCAAGGTAGATGATGTGCTATAA
AGCATGCAGTAAAGCTTCTCTAACTTTGACATTCGAATGTAAGAATATTATTGTGACTGGTCAAATGGAAACAATACCAT
CAGGATTTTCATAAAAAAATATGTTATGATTCTCAAATTTTAATTTTATTGCTGACATATCCTTATGAACCAAATTAACT
GCAGTTTAGAGAATGTGTCCATGTTTTCAGTTACATGTGACCTCTGCCTAACAAAATGTAGGGGAACGGCACGATCACCC
TCCGAGAACAGATCAAGCTGTTTGCAGACACCAAGGTGACCATGATCGAGGCCAACAAGCTGGGAAATAATAGGGTCAAT
CGCTTGCTGTCCCGGTCCCTATTCCTCATCAGCACCGCAGGCA-CGATTTCTCGGCATTTAGTGACGGTAGGGCAACCAG
AAGTGATGCATCGGCCTACATCGCCAAAACGGTCACCACCTACCTCAAGCACATCAAGGTAGGTTCACGTGAGCAACAGG
AGGT-TGAAATCTTGTCTGGTATTTCGGGAGATCTCA-----------------GTGACATTTGATTTCAGAT-------
---------------------------------------AAACCTTGTCAGTATGTCCATCTCAATGTCCAGGATGTTAT
TTTAACTTGACTGTTTTCA-TAACATTTTGCCAGAATAGCAAAAGAACCACACATGTTTAAA------------------
--TGAAATCTCTTTGACCCTCATAATTTCAAACGCACGGATGCACACACACAATATGTGGGCAGGAGTTGTACAGGCTGG
GGGCACGGAGGCTAGGACTGCTGGACGCGCTGCCCATCGGATGCTTGCCGGGCTGCAGAATTTCCTTTGGACATGATGGC
ACGTGTGACACCACTGCCAACTCTCTGGCCCGGCGGTTCAATGCCCTACTCCGGCTTGAAATGGCCAGCGCCACGGCAGC
TTCGATGCCAGGCATGGAGTACTCCATCGCCAGCATCTACGGCATCTTCTCCGACATGATCACCAACCCGGAGCTGGACA
ACGGTTAGCTCTCTTTGCCTGAGT-TCGATGCAACAAGGGTCAATTTCTTTCTTCAAAATTTCTATTACAAGGTCTGCGC
AATCAAAAATATATTGGAGTAAAATG------------------------------------------------------
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-----------------------------------------------------------------GAATGAAAACATTCG
GCTAATCTATACACGGTTACCTCTGAGCCACCAATCGGTTACTGGAACACTGGATCGTTCACCGATCTCTGTGAAAGTCA
AACTGTTTCATGTAATAATTCTTCTGCATTCCTAACGGCGCGCCGTCCGGTTGTTCTTACCTAATGAACCGTTGGATC-G
TATCATCAGGACTGCAGGAGGCGACTAGCGCGTGCTGCGGAGGAGGGAGGCTCAACGCGGAGCTCAACTGCTCGGCGAGC
TCGAACCTTTGCACCGACCGCGACGGCTACGTGTTCTGGGACAAGGTCCATGGGACGCAGGCCGCCTACCAGCGAGCCGT
TGCCGCCATGTTCGACGGCGCGGCGGCGACAAAGTTCACGGAGCCCGTCAGCTTCGGGCAGTTGATCACCGGGAAACAGG
CAGCGCCGGTTGCCGTGTTAGATAAACTGGAGCGTCCGTGCGTGGATTTGGAAGCTGTGATCTAGCCAAGGGAAGGGAAT
TCGGAGGATTCTTCCGCAGTGTTCGGTGCAGTACATCTTCAACTCTGTTGAGCCATCACCAGGCAGCAAGCCTGGTAAGC
TATCTCAAAAAACAAAAACTCTGTTGAGCCACGGATGTCATTCCTGCCACAGCAACCATCGAAATTAAGGGTCTCTTTGA
TTCAAAGGATTTTCATGGGATTTTTGAAGGATTATAATCCTTAGGAATTTTTCCTACATTCGTCGTTTGATTCGTAGGAT
TGAATCCTATAGGATTTTTTCCTAAGGATTCATTTGTACTACATTTCACAGGAATTCTAACATCCACTCAAACCTCTTGG
AAGAAATCCTTTGTTTTTCCCGTGACACAATCAAACAAACACAAATCCCATAGGGATCCAATGGACATGCCATTCCGATC
CTACATTTTCCCTATTCTTGTCCTTTTGCAATCCTATGAATCAAAGAGGCCCTAAGGTGGAACTACATGCGATCTCTAGG
AGTTAGGGTGTTGTATGTCCGCGCGTCCAAAGTCCAAACTACCCCTCGCCTCGATGTTCCCTCTCTTATGTCTCTTGCAT
TAACTTAATCAAATCATACTAAAACCTTAACTAAATTG----AAACTTTTCTCATCTTCCTTTACACATATTCAAATCAA
ATCCATGGTCGAGGATTGAGTCAGGGTGACTCCACCGCCCCTGC--TTTGTCCTCGCCATTGACCCTCTGCAGCAGCAGA
TCCTCGATGTTGCCATGGAACATGACTTTTTACACAAGATTAGAGGGAGGGTGATCCTTGTATGT---------------
----------------------------------------TGATGACGCGGCCATCTTGGTCACTCCTGCCACACAAGAC
G--------------------TCTCCTCTCCTTTGGCGAGGTCACCAGGCTTGCAACAAACTTTCAGAAGAGCTCTGTCG
TCCCTATCCGTTGCGGGTATTTAAATCTAGACAAATTCCTTGGTGGCCTTTCGGCCATGCGACATCCTTCCCTTTGAAGT
ATGTTAGCACCCTCACCATGCATATC
>chr5A_1
ATCCTAACTTCTACCATGCGCAAATGCTAGAAAAAACAAGTACTAATAGCACATTTTAATTAAATAAAAATAAAAAATAT
GTATGATTTTAGGTTCTCATTTGTTGTGAAAAAATG-----AAAAAAAGTTAAGCTTTATTTCTAAAACCCAAAAATATT
ATATAAACAAACTATGTTTTGTCATGCTGGCGGTAGCTGGTCCACCTCCACACCTCGTCCCTTTGCCAGATTCAAAGCTC
ACGTGTCTGGTGATGCCCGATGCCACCCTTTGGGGAAGGTGTGGCCCCATCCCCCTTCCTA-GTTCTGACCATTGTTTTG
TCTGCCTCATCTCCGAATCATGATCTAGCGGTTATGGGTTGCTAAGGCTCGGGCCAAGGCAAAATCCCTCCTTAGATTGC
TGATGTTGACAGCGACGAACTCACGGA-TGTAGTTCTACCTTCTTGCAGGCGTTGTCAGGGCCTTTATTTGCACCCTCTT
CGAGCTTAGAGGAAAGTCCAGGTACCGTTCTTCCAATCGGATGG--------CCACCACGTCGTTTCCCTTCTCAAGGCG
ACATCTTGCTCGCTCACGATGTCGCTCGTGTTGGTTGTGTTTTATCATCTATCCGTGCCGAGCATCCCTTGCTC-----T
CTATGTCATATGTTGTACCTTTCTTTGAACTCATTTTAATTCTTTTTTGTTCTGTTTTAGGGAACTTTTTTTTTGTTTTT
TTAGACACACTTTTTTTTGTTGAGGCAACAATGCCGTGAGTGCTCAAGTGGGCCTCCAAGCCCAATTACTCTCGTCTTTT
TTTCTGGTAAGATCTTCTCGTCTTGGCACAGGGTCCCGCATAAACAGGGAGCAACTAGTTAACGAGCGCTTCTTCGGGAG
CCTCGCAACAATCAGCGCCACTTGGCGCGCTCTCAGCCATTCGCCACGTATCGCGCTCTGGACGCTTCTTTCGGATTTTG
TTTGTTTTTTTCGCACACGTTTTTGGCTTTTTAAACGGCTTTTTTCTGGGTTTTTTTGACGTTTTGGTTTCCCCCCGGTC
TTTCTTAGCTTTTTGATCAAAAAAAATTTGCGTGAAAAAAATGCGTTTTTTTATTTTCCTTTCGCGAAAGTCACGTTTTT
TCTTCCGCGAGAGGCACGGTTGTGCTTTAGCGAGAGTTACGCCCGTGCGTTTCGGAAACGAAAANNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGTTGTG
CTTTTGCGAGAGTCACGACCGTGCCTTTCGGAAAAGGGAAAAACAAAACGTGTTTTCTGTTTTTTTGTGAGAGTCACGGT
TTTGCTTCCGCGAGAGGCACTGTTGTGCTTTCGCGAAAGTCACGACCGTGCCTATAGAAAAGGAAAGAGAAAAACAAAAC
ACGTTTTTTTGTCTTTTTTCTTTCGTGAGAGTCACGGTTTTGCTTCCGCGAGAGGCACGGTTGTGCTTTCGCGAAAGACA
CGGCCGTGCCTCTAGAAAAGGGAAAAAATATGCGTTTTTTGTTTTTTTTCATTCGCGAGAGTCACGGTTTTGCTTTCGCG
AGAGGCACGGTCGTGCCTTCGCGAGAGTCACGGCCGTGCCTCTCGGAAACGAAAAAACGCGTTTTCTGTTTTTTTTTCTT
TCATGAGAGTTACGGTTTTACTTTCACGAGAGGCACAGTTGTGATTTCGCGAGAGGCACGGACGTGCATCTTTCAGAAAG
GGAAAAAAACCATGCTCCCGGTTCGATTTTTTCGCCTAGTTTTTTTCGTGAAAAAAATTCGTCAAAACCTATCAACATGA
GATCTAGTTTTGAAGATCTCGACGAGAGGAATCCAATGGTGAAAACGGTTCGAGATTTAGACGTACGGTTTAAAAGATAA
AACATTTTGAATAAACAAATCTACAAAAAAAGAAAAACTCTCATATTGCGACAAGTGGCGCGCTGCATGTGCGTCGCTTG
TCACGATCCAAAAAAGTGAAGTGTTTTTTGCAACGAGTACTTATTAAATTTCGGCATAAACATGTGCACAGAATTGCACT
GTCCCTACCACAAGTGCGCATGGCTTACGTCAGTCAGCCGCATTACGTGTCTACTCCTCCACCACAAAGGCATGTCGACA
GGGCAACGACTCACATTAATTAATCAAC--ATGATGATGTGTAGGCATGGAGCTACCCTCAGCTGATGATCAGCTAG-TG
CTCAGTCACCGCCCGATCCATCGG-TCTACCTGTACGATGAGGAAGATGTCCACGGTTGCGGGCGCTGCTTTGTTGCTAG
CCGCCGCGGTCGTCTGCTCCTCGGCGGACAGCGAGAG------------------AGTCCCCGCGGTGTACGTGTTCGGC
GACTCCCTCGTGGACGTCGGCAACAACGACTTCCTGCCGCCGCCGGCGCCCAGGGCGGGTTTCCCCTGCGGCGTCGACCT
GCCGCGCGCGATCCCCGGCGGACGGACCGGGAGGTTCACCAACGGCTACAACCTGGCCGACATCATCGGTGAGTCTGAAG
CTAATTTTAGTTGCGCGGACCTTGTGCACTCGCTGTGCCTATGCTTCACACTGCT-------GTTAGCCCACAGATCTTA
AGCTAATTTAGTCTGATCCGGTTCCTCACAATCCTTGTGCCGATTTAGATGAACTACCGTAGTTGCCAAGCTGCTTGAGA
TGATGCACATTAAACGATGCCTTCAAATTTTTTGAGTGCCAGTCCCCTCAAATCTTTGCGAAAACAGACCATTGTTCTTT
TTTCTTATCTGCTGATCAAGGCAAGGGCGCAGAAAGAATTAGACAGGAAAATTACAAACAGGGCCTCACATAAAGCGGTG
GGCACTATAATTTACGAAAAGGTGCTCATATAAACAGAAAATTACATATACATCCTGGATTCTTGCAAAGAGGACCC---
-TGATCACAGATGA--------------------------TCAGGAATGGAACCAATCTCG-----------CGAAACCA
CTTTGTCTGATGAGACCTCCACAG-------TAGAATATGCAATGGACTCCACCCTAAACCAGCACTGCCTCTAACTCTG
CCATCATGTCCGGGAGGCATAAACTTGACCGCTCTTCGGCCATAGAATACAACGGCTCATCGGAGGAGACCGCCCTTGGA
ACATCACATGGGCATCGTAGCTCCTCCAAAATCATTGTTGTTGATGCGCACGGTTCCCATTTGTAGCACCCAGATCTCAA
TACAAATGTGCATGATATTCA-TTATGATACTTCCCACTACAAGAGGTCTAAAAACAATTCACTTGAAATGCTGCATACT
GTCTTTCCGAATGTTGCAGTTATTATCATTTTATTTAGAAATTCTATGTGTTTATTTCCATTCCAATTTGGTAATACTAA
TACATACGTTAC-TTATGTATATATACACAGCACAACGGGTGGGGTTTGACATGAGCCCGTTAGCTTACCTCTCCTTGAC
GCCGCAAGCGAGCCTCGACCTCCTGAGCGGCCGCGTTGGGGCCAATTATGCTTCTGGTGGATCAGGAATCCTTGACGATA
CTGTATGTGTGTACAAATGTACATAATTTAGAACCTGCACTTACTTCGCTCGAGTCACCATC--CACACACAGTATGATT
TTGCCCAATCAACACCTCTTATTTCTGCACATATCTTAGTTCGTTATGTTTATCAGCAGTGCAAATTAGACCCTGAAGTC
TGAAGAGGGTGACTACTTGTTGTGAATTAAGCTTGATTGACTTTTACTATCTTGG-TTCAAGATAGATGATGTGCTATAA
AGCATGCAGTAAAGCTTCTCTAACTTTGACATTCAAATGTAAAAATATTATTGTGACTTGTCAAATGGAAACAATATCAT
CAGGATTTTCATAAAAA--TATGTTATAATTCTCAAATTTTAATTTTATTTCTGACATATTGGTATGAACCAAATTAACT
GCATTTTGGAGAATGTGTCCATGTTTTCAGTTGCATGTGGCCTCTGCCTTACAAAATGTAGGGGAACGGCACGATCACGC
TCCGAGAACAGATTAAGATGTTTGCGGACACCAAGGCGACCATGATCGAGGCCAACAAGCTGGGAAATAATAGGGTCAAT
CGCTTGTTGTCCCAGTCCCTATTCCTCATCAGCACTGCAGGCAACGACTTCTTGGCGTTTGGCGACGGTAGGGCAACCAG
AAGTGATGCATCAGCCTACATCGCCAAAATGGTCACCACCTACCTCAAGCACATCAAGGTAGGTTCATGTGAGCAACAGG
AGGTTAAAAATCTTGTCTCGTATTACGGGAGATCTCA-----------------GTGACATTTGAGTTCAGAT-------
---------------------------------------AAACCTTATCAGTATATCCATCTCAATGTCAAGGATGTTAT
CTTGACTTGACTGTTTTCA-TAACATTTTGCCAGAATACCAAAAGAACCACACATGTTTAAA------------------
--TGAAATCTCTTTGACCCTCATAATTTCGAACGCACGGATGCACACGCACGATATGTGAGCAGGAGTTGTACAGGCTGG
GGGCACGGAGGCTAGGACTGCTGGACGCGCTACCCATCGGATGCTTGCCGGGCTGCAGAACTTCCTTTGGACACGATGGC
GCGTGTGACGCCGTTGCCAACTCTCTGGCACGGCGGTTCAACGCCCTACTCCGGCTTGAAATGGCCAGCGCCACGGCAGC
TTCGATGCCATGCATGGAGTACTCCATCGCCAGCATCTACGGCATCTTCTCCGACATGATCACCAACCTGGAGCTGGACA
ACGGTTAGCTCTCTTTGCATGACTCTCGATGCAACAATAGTCAATTTGTTTCTTCAAAATTTCTTTTACAAGGTATCCGC
AACCAAAATTATATTGTAAAATGTTAAGATATTCCTATCAACCAACTATCCCAAAAGACCGATCTGATAGGAAGAAGAGA
TATAATATACTTAACACCCCCCCTTCACATCCGGCGTGGATATGGAATGATCAACAGTTCAACACCTCCCCCACACACCC
GACGTGGGCGTGGATAAATGATTGGGGAAAATGCAGGGACTGAGACTTGAACCGAAACCTGGCTCATACCATGTTAAGAT
ATTCCTATCAATCAACTATCCCAATCTAATAGGAAGAGGAGATATAATATAATTAACATAAAATAGAATGAAAACATTCG
GCTAATCTGTACACGGTTACCTCTGAGGC-------------TGGAACACTGGATCGTTCAC-GATCTCTGTGGAAGTCA
AAATGCTTGATGTAATA---CTTCTGCATTCCAAACGGCGCGC-GTCCGATTGTTCTTACCTAATGAACTGTTGGATC-G
TATCATCAGGACTGCAGGAGGCGACTAGCGCGTGCTGCGGAGGAGGGAGGCTCAACGCGGAGATCGACTGCTCGGCGAGC
TCGAACCTTTGCACCGACCGCGACGGCTACGTGTTCTGGGACAAGGTCCACGGGACGCAGGCCGCCTACCAGCGAGCCGT
TGCCGCCATGTTCGACGGCGCGGGGGTGACAAAGTTCACGGAGCCCGTCAGCTTCGGGCAGTTGATCACCGGGAAACAGC
CAGCGCCGGTTGCCGTGTTAGATAAACCGGAGCGTCCGTACGTGGGTCTGGAGGCTGAGATCTAGCCAAGGGAAGGGAAC
TCGGAGGATTCTTTTGCAGTGTTCGGTGCAGTACATCATCAACTC-----------------------------------
------------------CTCTGTTGAGCCATCGATGTCATTCCTGCCA---------TCGAAATTAAGATGGAACGCTA
CTCCCTTATGTTCGTGC---------------------------------------------------------------
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-------------------------------GTCCAAACTACCCCTTGCCTC-ATGTTCCCTCCCTTATGTCTCATGCAT
TAACTTAATCAAATCGTACTAAAACCTTAATTAAATAAATCAAAACTTTTCTGGTCTTCCTTTACACATATTCAAATCAA
ATCCATGGTCGAGGACTGAGGCAGGGTGACTCCACCGCCTATGCTTTTTGTCCCCGCCATTGACCCTCTGCAGCAGCAGA
TCCTCTATGTTGCCATGGAACATGACTTTTTACACAAGATTAGAGGGAGGGTGACCCTTAT-------------------
------------------------------------ATGCTGATGACGCAGCCATCTTGGTCACTCCTACCACACAAGAC
ATTGACCACCTCCGGAGCCATTCTCGGCTCCTTTGACGAGGTCACCAGGCTTGCCACAAACTTTCAGAAGAGCTCTGTCG
TCCCCATCCGTTGCGGGCACTTAAATCTAGACAAAATCCTTGGTGACGTTACGGCCATGCGACATCCTTCCCTCTGAAGT
ATATTAGCCCCC--------------
>chr5D_177
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----------------------CATGCTGGCGGTAGCTGGTCCACCTCCACACCTCGTCCCTCTGCCAGATTCGAAGCTC
GCGCGTCGGGCGATCCCCGATGCCACCCTATGGGGAAGGTGTAGCCCCACCCCCCTTCCT-GGTTCTGTCCATCGTTTTG
TTTGCCTCATCTCCGA---------------TTATAGGTTGCTCAGGCTCGGCCCAAGGCAAAATCGATGCTCGGATTGC
CGATGCTGGCAGCGACGACACTCGTGGGTGTCGATCTACCTTCTTGCAGGCACTGCCAGGGCCTTTGTCTGCGTCCTCTT
CGAGCTTAGAGGAAAGTCTAGGTA----------AACCGGATGGCGACGACTCCATGATGTTGTTTCTCTTCTGAAGGTG
CCATCTTGCTCGCTCGCGGTGTCCCTCGTGTTGGTTGTGTTTTATCATTCGTTCGTGCCGTGCATCCCTTGTTC-----T
CAATGTCATATGTTGTACCTTTCTTTGAACTCATTTTAATTCCTTTTTTTTCATTGA-----------------------
--------------------TGAGGCAACAGTGCCGTGAGTGCTCAAGTGGGCCTCCAAGCCCA----------------
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>chr5D_810
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---------------------------------------------------------------------------GCACT
GTCCCTACCACAAGTGCGCATGGGTTACGTCAGTCAGCCACGTTACGTGTCAGCTCCTCCACCACAATGGCATGTCGACA
GGGCAACGACTCACATTAATCAAGATGATGATGATGATGTGTAGGCATGGAGCTACCCTCAGCTGATGATCAGCTAGTTG
CTCAGTCACCGCCCGATCCATCGGGTCTACCTGTACGGTGAGGAAGATGTCCACGGCGGCGGGCGCTGCTTTGTTGCTAG
CCGCCGCCGTCGTCTGCTCCTCGGCGGACGGCGAGAGCGAGGCTCGCCGTCGCGCAGTCCCCGCCGTGTACGTGTTCGGC
GACTCCCTCGTGGACGTCGGCAACAACGACTTCCTGCCGCCGCCGGCGCCCAGGGCGGGTTCCCCCTGCGGCGTCGACCT
GCCGCGCGCGATCCCCGGCGGACGGACCGGGAGGTTCACCAACGGCTACAACCTGGCCGACATCATCGGTAAGTCTGAAG
CTAATTTTAGTTGCGCAGACCATGTGCACTCGCTGTGCTTGTACTTCACACTGTCTTTACTCGTTAGCCCACAGATCTGA
CGCTAATTTAGTCTGATCCGGTTCCTCACAATCCTTGTGCCGATTTAGATGAACTACTGTAGTTGCCAAGCTGCTTGAGA
TGATGCACATTAAACGATGCCTTCTGATATTTTGAGTGCCAGCTCGCTCAAATATTTGCCAAAACAGCCCATTATTTATT
TTCTTTTCTT--TGAGCAAGGGAAGGGCGCATAAAAGACTTG-CAGGAAAATTACAAACAGGACCTAATATAAAGTGGTG
GGCAATACAATTTACAAAAAGGTGCTCATATAAACAGCCCATT--------ATCCTGGATTCTTGCAAAGAGTACCC---
-TGATCACAGATGAAAGATTGCAGTTGGGTCTAA-TCTGCTCAAAAATGGAACCAATCTCGCCAGCCGGGGATGAAACCA
CTTTGTCTGATGAGACCTCCACAG-------TAGAATATGCCATTGACTCCACCCTGAAGCAGCACTGCCTCTAACTCTG
CCATCATGTCCCGGAGGCATAAACTTGACCGCTCTTCGGCCATAGAATACAATGGCTCGTCACAGGAGACCGCCCTTCGA
CCACCACATGGGCATCGTAGCTCCTCCAAAATCATTGTCGTCGATGCGCACGGTCCC---TTGCAGCACCCAGATTTCAA
TACAAATGTCCATGATACTCGTTTATGATACTTCCCACTACAAGAGGTCTAACAAGTCACTTG----AATGCTGCATACT
GTCTTTCC-AATGTTACAGTTATTATCATTTTATTTTGAAATTCGATCTGTTTATTTCCTTTCCAATTTGGTAATACTAA
TACATACATTTATTTATGTATATGTACGCAGCACAACGTGTGGGGTTTGACATGAGCCCGTTAGCTTACCTCTCCTTGAC
ACCGCAAGCGAGCCTCGACCTCCTGAGCAGCCACGTTGGGGCCAATTATGCTTCCGGTGGATCAGGAATCCTTGACGACA
CTGTATGTATGTACAAATGTACATAATTTAGAACCTGCACTTACATCACTCGAGTCACCATC--CACACACAGTATGATT
TTGCCCAATCAACACCTCTTATTTCTGCACATATCTTAGTTCGTTATGTTTATCAGCAGTGCAAATTAGACCCTGAAGTC
TGAAGAGGGTGACTACTTGTTGTGAATTAAGCTTGATTGACATTTACTATCTTGG-TTCAAGATAGATGATGTGCTATAA
AGCATGCAGTAAAGCTTCTCTAACTTTGACATTCAAATGTAGAAATATTATTGTGACTTGTCAAATGGAAACAATATCAT
CAGGATTTTCATAAAAA--TATGTTATAATTCTCAAATTTTAATTTTATTGCTGACATATCCTTATGAACCAAATTAACT
GCATTCTAGAGAATGCGTCCATGTTTTCAGTTACATGTGGCCTCTGCCTAATAAAATGTAGGGGAACGGCACGATCACGC
TCCGAGAACAGGTCAAGATGTTTGCTGACACCAAGGCGACCATGATCAAGGCCAACAAGCTGGGAAATAATAGGGTCAAT
CGCTTGCTGTCCCAGTCCCTATTCCTCATCAGCACTGCAGGCAACGACTTCTTGGCGTTTGGTGACGGTAGGGCAACCAG
AAGTGATGCATCGGCCTACATCGCCAAAATGGTCACCACCTACCTCAAGCACATCAAGGTAGGTTCTTGTGAACAATGGG
GGGC-AAAAATCTTGGTTGCTATTAACGGCAGATCTGAGCTGGTTTCGAGACGGGTCACATTTGAGTTCTGGTTTGAAAA
TGAGATAAATCTTATCAATATGTTCATCTTTTGAAAATGAAATCTTATCAATATGTTCATCTCAATGTCAAGGATGTTAT
TTTAACCTCACTGCTTTTCGTAACATTTTGCCAGAATACCAAAAGAACCACACATGTTTAAAATCAACAAGTTTTGGACA
CCTGAAATCTCTTTGACCCACGCAATTTCAAACGCACCTATGCACACACACAATATGTGAGCAGGAGTTGTACAGGCTGG
GGGCACGGAGGCTAGGACTGCTGGACGCGCTGCCCATCGGATGCTTGCCGGGCTGCAGAACTTCCTTTGGACATGATGAC
GCGTGCGACGCCGCTGCCAACTCTCTGGCCCGGCGGTTCAACGCCCTACTCCGGCTTGAAATGGCCAGCGCCAAGGCAGC
TTCGATGCCAGGCATGGAGTACTCCATCGCCAGCATTTACGGCATCTTCTCCGACATGATCACCAACCCGGAGCTGGACA
ACAGTTAGTTCTCTTTGCATGACTCTCGATGCAACAAGGGTCAATTTCTT----CAAAATTTCTATTACAAGGTCTGGAA
AACCAAAATTACTCCCTCCGTCCCATAATATAAGAACATTTTTGACACTAGTAAACGCTCTTATATTATGGGACGGAGGG
AGTATATTGTAGTA------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------GAATGGAAACATTCG
GCTAATCTATACACGGTTACCTCTGAGGCACCAATCGATTACTGGAACA-------------------------------
----------------------------------------------------------------TGAACTGTTGGATCGG
TATCATCAGGACTGCAGGAGGCGACGAGTGCGTGCTGCGGAGGAGGGAGGCTCAACGCGGAGCTCGACTGCTCGGCGAGC
TCAAACCTTTGCACCGACCGCGACGGGTACGTGTTCTGGGACAAGGTCCACGGGACGCAGGCTGCCTACCAGCGAGCCGT
TGCCGCCATGTTCGACGGCGCGGCGGTGACAAAGTTCACGGAGCCCGTCAGCTTCGGGCAGTTGATCACCGGGAAACAGG
CAGCGCCGGTTGCCGTGTTAGATAAACTGGAGCGTCCGTACGTGGATCTGGAGGCTGAGATCTAGCCAAGGGAAGGGAAT
TCGGAGGATTCTTTTGCAGTGTTCGGTGTAGTACATCTTCAACCC-----------------------------------
------------------CTCTGGGGA-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------TTGTATGTGCGTACGTCCA----CCAAACTACCCCGCGCCTCGATATTCCCTCACTTATGTCTCTTGCAT
TAACTTAATCAAATCAAATCTTGTAAAACCTCAACTAAATCAAAACTTTTCCGATCTTTCTTTACACATATTCAAATCAA
ATCCATGGTCAAGAACTGAGGCAAGGTGACTCCACCATCCCTGCTTTTTGTCCTCGCCATTGACCCTCT---GCAGCAGA
TCCTCGATGTTGCCATGGAACATGACTTTTTGTACAAGATTAGAGGGAGGGTGACCCTTATGTCTTGCCATGGAACATGA
CTTTTTGCACAATATTAGAGGGAGGGTGACCCTTATATGCTGATGACGCGGCCATCTTGGTCACTCCTACCACACAA---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------
>SNPs
--------S-S---------S---------S-----S--S-------S---S-------------S--------------
--S-S--------S----------S-S-SS----SSSSSSS-----SS----------S-----S-----S---------
-S-S-----------------------------------S----------------S-----------------------
---------------------------------------------S-----------S--S---------S---------
--------------------------S----------------------------------------------------S
-------S----S-----------S-------------------------------------------------------
-S-----------------------S----SSSS------S------------------------------------S--
S---------S-------------S----------------------------------S------------S-SSSSS-
--------------------------------------------------------------------------------
-----------------S--S--------S----------------------------------S--SSSS---SSSS-S
S--------------S---------------SSS----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------SS-S---S------------SSSSS-S------------------------------------
-----------------------------------------------------------S---------S----------
--------------------------------------------------------------------------------
---------------------------S-----------------------S----------------------------
---------------------S----------------------------S--S--------------------------
---------S----------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------S-------------------------------------------
S------------S--------------S---------------------------------------------------
-----------------------S--------------------------------------------------------
-------S---------------------------------------------------------SS--SSS--------
--------------------------------------------------------S-----------------------
-------S-S--------S-S---S--------S-S----------------------S----------S-----S-SSS
S-----------S---------------------S-------------------------------S-------------
------------------------SSSSSSS-------------------------------------------------
--------------------------------------------------------------------------------
-------S--------S--------------S------------------------------------------------
---------------------------S-------S----------------S-S------S------------------
--------S----------------S---------------------------------S--------------------
------------------------------------S----------------------S--------------------
-------S---S---S----------------------------------------------------------------
-------------------------------------------------------S--S---SS----------------
-----------------------------------------------------S--------------------------
---------S--S---------------------------------------S--S------S-----------------
----------------------------------S-------S---------------S-----------------S---
-----------------SS--------S----------------------------------------------------
---S-----------------------------------S--------------------------------------S-
-----------------S-------S----------S-------------------------------------------
-------------S---------------------S-----------S----S---S---S-------------------
-----------------------------S-------------------------------------S------------
-----SS-----------------S----------------------------------------S--------------
----------------------------------------------S----------------------S----------
--------------------------------------S-----------------------------------------
-----------------------------------------------------------S--------------------
------------------------------------------------------------S-------------------
S--------S--S----------------------------S--------------------------------------
--------------------------------------------------------------------------------
------------------S---S---------------------------------------------------------
--S-----S-------S-SS-SSS-S------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------S---------S------------------------S----------S------
--S--S--S--------SSS------------S----------S-----S-------------------S----------
-----------------------------------------------------------------S--------------
--------------------------------------------------S-----------------------------
--------------------------S-----------------------------------------------------
---------------------------------------S-------S----S----S----------------------
-------------SS------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSS-------------SS----------------SSSSSSSSS-----------SSSSSSSSSS-
S--SSSSSSS--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSS--------S--SS------SS--------------------------------S----------------
------------------------------S-----SS--------------S---------------------------
---------------S----S-----------------------------------------------------------
------------------------------------------------------S----S-S-S----------------
--------------------------------------------------------------------S-----------
S------------------------SS--------S------------------S-------------------------
----S------------S-S---------------S---------S-S--S----------------------S------
--S-----S---SSSSSSSSSSSSSS
>forward_110
--------------------------------------------------------------------------------
----------AGGCTCTCATTTGTGGAGGG--------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_3448
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-------GTGGGCATCATAGCTCCTCC-----------------------------------------------------
--------------------------------------------------------------------------------
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>forward_3310
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----------TGAGACCTCCACAGACCACA--------------------------------------------------
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>reverse_4357
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------------------------------------TGACCATGATCGAGGCCAAC------------------------
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>forward_3311
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-----------GAGACCTCCACAGACCACAG-------------------------------------------------
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>reverse_4860
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-----------------------------------------------------------GGCAGGAGTTGTACAGGCTG-
--------------------------------------------------------------------------------
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>forward_4566
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------------------------------------------------------------------CACGTGAGCAACAG
GAGGTT--------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------
>reverse_6098
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-----------------ACTCTGTTGAGCCACGGATG-------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------
