Multiple sequence alignment - TraesCS5B01G088900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G088900 chr5B 100.000 3466 0 0 1 3466 114424514 114427979 0.000000e+00 6401.0
1 TraesCS5B01G088900 chr5D 92.666 2359 95 30 635 2932 104625218 104627559 0.000000e+00 3326.0
2 TraesCS5B01G088900 chr5D 92.529 348 26 0 3119 3466 36177107 36176760 1.860000e-137 499.0
3 TraesCS5B01G088900 chr4D 89.254 1824 131 33 901 2666 108053098 108051282 0.000000e+00 2222.0
4 TraesCS5B01G088900 chr5A 93.107 1117 49 9 749 1843 108281631 108280521 0.000000e+00 1611.0
5 TraesCS5B01G088900 chr5A 90.344 1191 88 20 1784 2958 108280617 108279438 0.000000e+00 1537.0
6 TraesCS5B01G088900 chr5A 81.202 516 60 25 62 569 108282395 108281909 7.020000e-102 381.0
7 TraesCS5B01G088900 chr4A 90.491 936 52 11 901 1811 468207687 468208610 0.000000e+00 1201.0
8 TraesCS5B01G088900 chr4A 86.919 1055 87 25 1783 2795 468208543 468209588 0.000000e+00 1136.0
9 TraesCS5B01G088900 chr4A 97.222 36 1 0 1746 1781 468208580 468208615 1.040000e-05 62.1
10 TraesCS5B01G088900 chr4B 90.192 938 56 9 899 1811 168565657 168566583 0.000000e+00 1190.0
11 TraesCS5B01G088900 chr4B 87.364 918 71 14 1783 2666 168566516 168567422 0.000000e+00 1011.0
12 TraesCS5B01G088900 chr4B 89.044 429 32 5 3049 3466 611671884 611671460 5.130000e-143 518.0
13 TraesCS5B01G088900 chr4B 88.564 411 41 3 3057 3466 5170641 5170236 8.640000e-136 494.0
14 TraesCS5B01G088900 chr4B 91.341 358 28 1 3109 3466 89279956 89279602 1.450000e-133 486.0
15 TraesCS5B01G088900 chr4B 82.960 446 72 4 998 1441 583081464 583081021 1.940000e-107 399.0
16 TraesCS5B01G088900 chr4B 97.222 36 1 0 1746 1781 168566553 168566588 1.040000e-05 62.1
17 TraesCS5B01G088900 chr2B 90.799 413 33 3 3049 3461 735530904 735530497 6.540000e-152 547.0
18 TraesCS5B01G088900 chr2B 89.202 426 32 8 3051 3466 763509734 763510155 1.430000e-143 520.0
19 TraesCS5B01G088900 chr2B 89.074 421 31 7 3057 3466 105382234 105382650 3.090000e-140 508.0
20 TraesCS5B01G088900 chr3B 91.643 359 29 1 3108 3466 101686264 101686621 2.400000e-136 496.0
21 TraesCS5B01G088900 chr7B 88.124 421 35 8 3057 3466 611436421 611436005 1.450000e-133 486.0
22 TraesCS5B01G088900 chr7D 77.961 304 49 17 232 528 48362478 48362770 1.280000e-39 174.0
23 TraesCS5B01G088900 chr6D 94.444 36 2 0 2947 2982 101226056 101226091 4.830000e-04 56.5
24 TraesCS5B01G088900 chr6D 90.698 43 2 2 2946 2986 444705863 444705821 4.830000e-04 56.5
25 TraesCS5B01G088900 chr6A 96.875 32 1 0 2943 2974 160476767 160476798 2.000000e-03 54.7
26 TraesCS5B01G088900 chr1B 100.000 29 0 0 2950 2978 489786898 489786870 2.000000e-03 54.7
27 TraesCS5B01G088900 chrUn 100.000 28 0 0 2950 2977 352890342 352890369 6.000000e-03 52.8
28 TraesCS5B01G088900 chr3D 100.000 28 0 0 2946 2973 5355251 5355224 6.000000e-03 52.8
29 TraesCS5B01G088900 chr3D 100.000 28 0 0 2947 2974 512986592 512986565 6.000000e-03 52.8
30 TraesCS5B01G088900 chr3D 100.000 28 0 0 2947 2974 575541384 575541411 6.000000e-03 52.8
31 TraesCS5B01G088900 chr1D 100.000 28 0 0 2947 2974 365304393 365304420 6.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G088900 chr5B 114424514 114427979 3465 False 6401.000000 6401 100.000000 1 3466 1 chr5B.!!$F1 3465
1 TraesCS5B01G088900 chr5D 104625218 104627559 2341 False 3326.000000 3326 92.666000 635 2932 1 chr5D.!!$F1 2297
2 TraesCS5B01G088900 chr4D 108051282 108053098 1816 True 2222.000000 2222 89.254000 901 2666 1 chr4D.!!$R1 1765
3 TraesCS5B01G088900 chr5A 108279438 108282395 2957 True 1176.333333 1611 88.217667 62 2958 3 chr5A.!!$R1 2896
4 TraesCS5B01G088900 chr4A 468207687 468209588 1901 False 799.700000 1201 91.544000 901 2795 3 chr4A.!!$F1 1894
5 TraesCS5B01G088900 chr4B 168565657 168567422 1765 False 754.366667 1190 91.592667 899 2666 3 chr4B.!!$F1 1767

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
210 216 0.530744 CTCGGACCTCGGATGAACAA 59.469 55.000 0.0 0.0 39.77 2.83 F
212 218 1.134818 TCGGACCTCGGATGAACAATG 60.135 52.381 0.0 0.0 39.77 2.82 F
698 782 1.200519 TATTCGGCCTGTTACCAGCT 58.799 50.000 0.0 0.0 37.38 4.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2043 2255 1.097232 TCAAAAGCATGAGGCCATCG 58.903 50.000 5.01 0.0 46.50 3.84 R
2117 2329 1.413662 CCAGAGGGGAGCTTGATCCTA 60.414 57.143 4.86 0.0 40.01 2.94 R
2657 2872 0.693049 CACCAGGGGCTAACTCAAGT 59.307 55.000 0.00 0.0 0.00 3.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 3.926616 AGACACACAGATCTTTTACGGG 58.073 45.455 0.00 0.00 0.00 5.28
22 23 3.323979 AGACACACAGATCTTTTACGGGT 59.676 43.478 0.00 0.00 0.00 5.28
23 24 4.062991 GACACACAGATCTTTTACGGGTT 58.937 43.478 0.00 0.00 0.00 4.11
24 25 4.062991 ACACACAGATCTTTTACGGGTTC 58.937 43.478 0.00 0.00 0.00 3.62
25 26 4.202326 ACACACAGATCTTTTACGGGTTCT 60.202 41.667 0.00 0.00 0.00 3.01
26 27 4.755123 CACACAGATCTTTTACGGGTTCTT 59.245 41.667 0.00 0.00 0.00 2.52
27 28 5.929992 CACACAGATCTTTTACGGGTTCTTA 59.070 40.000 0.00 0.00 0.00 2.10
28 29 6.090898 CACACAGATCTTTTACGGGTTCTTAG 59.909 42.308 0.00 0.00 0.00 2.18
29 30 6.014840 ACACAGATCTTTTACGGGTTCTTAGA 60.015 38.462 0.00 0.00 0.00 2.10
30 31 6.531948 CACAGATCTTTTACGGGTTCTTAGAG 59.468 42.308 0.00 0.00 0.00 2.43
31 32 6.436532 ACAGATCTTTTACGGGTTCTTAGAGA 59.563 38.462 0.00 0.00 0.00 3.10
32 33 7.039223 ACAGATCTTTTACGGGTTCTTAGAGAA 60.039 37.037 0.00 0.00 0.00 2.87
33 34 7.817962 CAGATCTTTTACGGGTTCTTAGAGAAA 59.182 37.037 0.00 0.00 35.75 2.52
34 35 8.541234 AGATCTTTTACGGGTTCTTAGAGAAAT 58.459 33.333 0.00 0.00 35.75 2.17
35 36 9.163899 GATCTTTTACGGGTTCTTAGAGAAATT 57.836 33.333 0.00 0.00 35.75 1.82
36 37 8.543862 TCTTTTACGGGTTCTTAGAGAAATTC 57.456 34.615 0.00 0.00 35.75 2.17
37 38 8.152246 TCTTTTACGGGTTCTTAGAGAAATTCA 58.848 33.333 0.00 0.00 35.75 2.57
38 39 8.857694 TTTTACGGGTTCTTAGAGAAATTCAT 57.142 30.769 0.00 0.00 35.75 2.57
39 40 8.857694 TTTACGGGTTCTTAGAGAAATTCATT 57.142 30.769 0.00 0.00 35.75 2.57
40 41 6.743575 ACGGGTTCTTAGAGAAATTCATTG 57.256 37.500 0.00 0.00 35.75 2.82
41 42 5.648092 ACGGGTTCTTAGAGAAATTCATTGG 59.352 40.000 0.00 0.00 35.75 3.16
42 43 5.648092 CGGGTTCTTAGAGAAATTCATTGGT 59.352 40.000 0.00 0.00 35.75 3.67
43 44 6.151144 CGGGTTCTTAGAGAAATTCATTGGTT 59.849 38.462 0.00 0.00 35.75 3.67
44 45 7.539436 GGGTTCTTAGAGAAATTCATTGGTTC 58.461 38.462 0.00 0.00 35.75 3.62
45 46 7.363007 GGGTTCTTAGAGAAATTCATTGGTTCC 60.363 40.741 0.00 0.00 35.75 3.62
46 47 7.394641 GGTTCTTAGAGAAATTCATTGGTTCCT 59.605 37.037 0.00 0.00 35.75 3.36
47 48 8.797438 GTTCTTAGAGAAATTCATTGGTTCCTT 58.203 33.333 0.00 0.00 35.75 3.36
48 49 8.940397 TCTTAGAGAAATTCATTGGTTCCTTT 57.060 30.769 0.00 0.00 0.00 3.11
49 50 8.796475 TCTTAGAGAAATTCATTGGTTCCTTTG 58.204 33.333 0.00 0.00 0.00 2.77
50 51 5.787380 AGAGAAATTCATTGGTTCCTTTGC 58.213 37.500 0.00 0.00 0.00 3.68
51 52 4.898320 AGAAATTCATTGGTTCCTTTGCC 58.102 39.130 0.00 0.00 0.00 4.52
52 53 4.594491 AGAAATTCATTGGTTCCTTTGCCT 59.406 37.500 0.00 0.00 0.00 4.75
53 54 5.779771 AGAAATTCATTGGTTCCTTTGCCTA 59.220 36.000 0.00 0.00 0.00 3.93
54 55 6.441604 AGAAATTCATTGGTTCCTTTGCCTAT 59.558 34.615 0.00 0.00 0.00 2.57
55 56 7.619302 AGAAATTCATTGGTTCCTTTGCCTATA 59.381 33.333 0.00 0.00 0.00 1.31
56 57 6.715347 ATTCATTGGTTCCTTTGCCTATAC 57.285 37.500 0.00 0.00 0.00 1.47
57 58 4.532834 TCATTGGTTCCTTTGCCTATACC 58.467 43.478 0.00 0.00 0.00 2.73
58 59 4.017958 TCATTGGTTCCTTTGCCTATACCA 60.018 41.667 0.00 0.00 34.08 3.25
59 60 3.359695 TGGTTCCTTTGCCTATACCAC 57.640 47.619 0.00 0.00 31.14 4.16
60 61 2.916934 TGGTTCCTTTGCCTATACCACT 59.083 45.455 0.00 0.00 31.14 4.00
97 98 4.763279 TGACATGTGCTGTGAAGAATGATT 59.237 37.500 1.15 0.00 38.54 2.57
98 99 5.242171 TGACATGTGCTGTGAAGAATGATTT 59.758 36.000 1.15 0.00 38.54 2.17
177 183 9.579932 AGAAAATGAAAATGTTCTTCTACTCCT 57.420 29.630 0.00 0.00 34.60 3.69
181 187 7.067496 TGAAAATGTTCTTCTACTCCTGAGT 57.933 36.000 5.01 5.01 38.73 3.41
183 189 7.657761 TGAAAATGTTCTTCTACTCCTGAGTTC 59.342 37.037 4.94 0.00 37.47 3.01
190 196 6.929625 TCTTCTACTCCTGAGTTCAAATGAG 58.070 40.000 4.94 0.00 42.54 2.90
198 204 2.003301 GAGTTCAAATGAGCTCGGACC 58.997 52.381 9.64 0.00 41.33 4.46
199 205 1.625818 AGTTCAAATGAGCTCGGACCT 59.374 47.619 9.64 0.00 29.21 3.85
200 206 2.003301 GTTCAAATGAGCTCGGACCTC 58.997 52.381 9.64 0.00 0.00 3.85
210 216 0.530744 CTCGGACCTCGGATGAACAA 59.469 55.000 0.00 0.00 39.77 2.83
212 218 1.134818 TCGGACCTCGGATGAACAATG 60.135 52.381 0.00 0.00 39.77 2.82
218 224 3.623060 ACCTCGGATGAACAATGAAATCG 59.377 43.478 0.00 0.00 0.00 3.34
221 227 5.008019 CCTCGGATGAACAATGAAATCGAAT 59.992 40.000 0.00 0.00 0.00 3.34
227 233 9.090692 GGATGAACAATGAAATCGAATGAAAAT 57.909 29.630 0.00 0.00 0.00 1.82
264 270 8.356657 TCTGATTATTTTGTGTGGTAACCTTTG 58.643 33.333 0.00 0.00 0.00 2.77
270 276 5.723672 TTGTGTGGTAACCTTTGACAAAA 57.276 34.783 1.62 0.00 0.00 2.44
271 277 5.723672 TGTGTGGTAACCTTTGACAAAAA 57.276 34.783 1.62 0.00 0.00 1.94
361 367 9.696917 AACAAAATCAGTACTCCAAAATGATTC 57.303 29.630 0.00 0.00 39.13 2.52
476 484 9.474920 GACATTTGTCAAAGGATATCACAAAAA 57.525 29.630 16.39 5.10 44.18 1.94
541 549 6.845302 TCACTGTTCATCATAAGCATTTGAC 58.155 36.000 0.00 0.00 0.00 3.18
546 554 4.129380 TCATCATAAGCATTTGACCTCGG 58.871 43.478 0.00 0.00 0.00 4.63
555 563 2.570415 TTTGACCTCGGGTGCAAATA 57.430 45.000 0.00 0.00 35.25 1.40
560 568 1.339727 ACCTCGGGTGCAAATACTTCC 60.340 52.381 0.00 0.00 32.98 3.46
569 577 3.192633 GTGCAAATACTTCCCGTCCAAAT 59.807 43.478 0.00 0.00 0.00 2.32
584 635 2.094390 TCCAAATACTTCTCGTCCCGTG 60.094 50.000 0.00 0.00 0.00 4.94
635 686 2.551912 CGCTCCCAACACCACAACC 61.552 63.158 0.00 0.00 0.00 3.77
636 687 2.551912 GCTCCCAACACCACAACCG 61.552 63.158 0.00 0.00 0.00 4.44
658 733 1.732259 CTTCGGGGTTTGATCACTTCG 59.268 52.381 0.00 0.00 0.00 3.79
689 773 1.808945 GCCAGAATGATATTCGGCCTG 59.191 52.381 18.17 0.00 39.69 4.85
698 782 1.200519 TATTCGGCCTGTTACCAGCT 58.799 50.000 0.00 0.00 37.38 4.24
715 799 3.349927 CAGCTCATTTCTCATTCCCACA 58.650 45.455 0.00 0.00 0.00 4.17
726 818 5.063204 TCTCATTCCCACAACACTAACAAG 58.937 41.667 0.00 0.00 0.00 3.16
728 820 3.290948 TTCCCACAACACTAACAAGCT 57.709 42.857 0.00 0.00 0.00 3.74
747 839 2.036256 GCCCATGACAGCCCAGTT 59.964 61.111 0.00 0.00 0.00 3.16
962 1070 3.346734 GCCCACCCATTCCCCTCA 61.347 66.667 0.00 0.00 0.00 3.86
963 1071 2.683475 CCCACCCATTCCCCTCAC 59.317 66.667 0.00 0.00 0.00 3.51
964 1072 2.683475 CCACCCATTCCCCTCACC 59.317 66.667 0.00 0.00 0.00 4.02
1386 1494 4.329545 GGTGTCTTCGCCAGGGCA 62.330 66.667 11.42 0.00 43.16 5.36
1623 1734 9.702494 CTGCTTCTGATATGTGTGATTTAGATA 57.298 33.333 0.00 0.00 0.00 1.98
1696 1841 5.923733 ATTCGTAGGAACTCATTCTGTCT 57.076 39.130 0.00 0.00 41.75 3.41
1708 1853 4.717877 TCATTCTGTCTTTGAGCCTTGAA 58.282 39.130 0.00 0.00 0.00 2.69
1725 1870 5.251764 CCTTGAAATGTCTCCTGTTCATCT 58.748 41.667 0.00 0.00 30.51 2.90
2043 2255 4.396790 TGTGTATCTTCGGTTATTTTGCCC 59.603 41.667 0.00 0.00 0.00 5.36
2087 2299 9.875675 GATGAATTCTTCAGCTGTACAAATATC 57.124 33.333 14.67 6.93 43.98 1.63
2089 2301 8.886719 TGAATTCTTCAGCTGTACAAATATCTG 58.113 33.333 14.67 0.25 34.08 2.90
2090 2302 8.798859 AATTCTTCAGCTGTACAAATATCTGT 57.201 30.769 14.67 0.00 0.00 3.41
2105 2317 9.944376 ACAAATATCTGTACACAGTTACTCATT 57.056 29.630 9.11 0.00 44.12 2.57
2117 2329 9.120538 ACACAGTTACTCATTTTCTGTTTATGT 57.879 29.630 0.00 0.00 37.27 2.29
2399 2611 1.078848 GGTTGGTCTCATCGCTGCT 60.079 57.895 0.00 0.00 0.00 4.24
2490 2702 7.823310 AGAGCTATCATTGCTGTTTATCTATGG 59.177 37.037 0.00 0.00 41.30 2.74
2510 2722 2.436173 GGTTGCTGCCTCTAGATTACCT 59.564 50.000 0.00 0.00 0.00 3.08
2652 2867 6.463995 TTATGCTTGGATATTTGGTTGTCC 57.536 37.500 0.00 0.00 0.00 4.02
2657 2872 5.417580 GCTTGGATATTTGGTTGTCCAGTTA 59.582 40.000 0.00 0.00 45.22 2.24
2719 2934 9.827411 GTTTCTGTTTTAGTTTAGCTCTATTGG 57.173 33.333 0.00 0.00 0.00 3.16
2727 2942 8.777578 TTAGTTTAGCTCTATTGGTGGATCTA 57.222 34.615 0.00 0.00 0.00 1.98
2761 2982 4.094294 TGGTTGAATCAAACGTATAGCAGC 59.906 41.667 6.54 0.00 33.14 5.25
2762 2983 4.094294 GGTTGAATCAAACGTATAGCAGCA 59.906 41.667 0.00 0.00 0.00 4.41
2785 3009 6.259608 GCAGTATGTTTGCTTCTATCTGATGT 59.740 38.462 0.00 0.00 39.31 3.06
2844 3092 7.524717 AATACCTGCTTTTTACATCACTTGT 57.475 32.000 0.00 0.00 42.62 3.16
2866 3114 2.288152 CCAAAATCACCCGTCCAACAAG 60.288 50.000 0.00 0.00 0.00 3.16
2872 3120 2.328099 CCCGTCCAACAAGCTGAGC 61.328 63.158 0.00 0.00 0.00 4.26
2890 3138 7.023575 AGCTGAGCTAAATGTAAATTTGTTCG 58.976 34.615 4.49 0.00 36.99 3.95
2894 3142 6.852664 AGCTAAATGTAAATTTGTTCGGAGG 58.147 36.000 0.00 0.00 0.00 4.30
2904 3152 1.080705 GTTCGGAGGACGTGGTGAG 60.081 63.158 0.00 0.00 44.69 3.51
2911 3159 2.027469 GGAGGACGTGGTGAGGTAAAAT 60.027 50.000 0.00 0.00 0.00 1.82
2915 3163 1.073284 ACGTGGTGAGGTAAAATGGCT 59.927 47.619 0.00 0.00 0.00 4.75
2944 3193 1.828832 CGAACGCTAACTGCCTCTAG 58.171 55.000 0.00 0.00 38.78 2.43
2958 3207 4.145807 TGCCTCTAGGTACTTAGAGCATC 58.854 47.826 28.18 20.62 41.75 3.91
2959 3208 4.141135 TGCCTCTAGGTACTTAGAGCATCT 60.141 45.833 28.18 2.64 46.13 2.90
2960 3209 4.457949 GCCTCTAGGTACTTAGAGCATCTC 59.542 50.000 28.18 14.54 41.12 2.75
2961 3210 5.007682 CCTCTAGGTACTTAGAGCATCTCC 58.992 50.000 28.18 0.00 41.12 3.71
2962 3211 5.456907 CCTCTAGGTACTTAGAGCATCTCCA 60.457 48.000 28.18 1.35 41.12 3.86
2963 3212 5.626142 TCTAGGTACTTAGAGCATCTCCAG 58.374 45.833 10.48 0.00 41.12 3.86
2964 3213 4.145807 TAGGTACTTAGAGCATCTCCAGC 58.854 47.826 0.00 0.00 41.12 4.85
2965 3214 4.993212 TAGGTACTTAGAGCATCTCCAGCC 60.993 50.000 0.00 0.00 41.12 4.85
2969 3218 3.805267 GAGCATCTCCAGCCGTTG 58.195 61.111 0.00 0.00 0.00 4.10
2993 3242 3.003173 CTGGGGTCGAGGAGGCAA 61.003 66.667 0.00 0.00 0.00 4.52
2994 3243 2.528127 TGGGGTCGAGGAGGCAAA 60.528 61.111 0.00 0.00 0.00 3.68
2995 3244 2.124507 CTGGGGTCGAGGAGGCAAAA 62.125 60.000 0.00 0.00 0.00 2.44
2996 3245 1.303282 GGGGTCGAGGAGGCAAAAT 59.697 57.895 0.00 0.00 0.00 1.82
2997 3246 0.323451 GGGGTCGAGGAGGCAAAATT 60.323 55.000 0.00 0.00 0.00 1.82
2998 3247 0.811281 GGGTCGAGGAGGCAAAATTG 59.189 55.000 0.00 0.00 0.00 2.32
2999 3248 1.534729 GGTCGAGGAGGCAAAATTGT 58.465 50.000 0.00 0.00 0.00 2.71
3000 3249 1.468914 GGTCGAGGAGGCAAAATTGTC 59.531 52.381 0.00 0.00 0.00 3.18
3007 3256 1.928868 AGGCAAAATTGTCTCTGGGG 58.071 50.000 0.00 0.00 39.25 4.96
3008 3257 0.247460 GGCAAAATTGTCTCTGGGGC 59.753 55.000 0.00 0.00 0.00 5.80
3009 3258 0.247460 GCAAAATTGTCTCTGGGGCC 59.753 55.000 0.00 0.00 0.00 5.80
3010 3259 0.527565 CAAAATTGTCTCTGGGGCCG 59.472 55.000 0.00 0.00 0.00 6.13
3011 3260 0.611896 AAAATTGTCTCTGGGGCCGG 60.612 55.000 0.00 0.00 0.00 6.13
3012 3261 1.789576 AAATTGTCTCTGGGGCCGGT 61.790 55.000 1.90 0.00 0.00 5.28
3013 3262 1.789576 AATTGTCTCTGGGGCCGGTT 61.790 55.000 1.90 0.00 0.00 4.44
3014 3263 2.484287 ATTGTCTCTGGGGCCGGTTG 62.484 60.000 1.90 0.00 0.00 3.77
3015 3264 4.410400 GTCTCTGGGGCCGGTTGG 62.410 72.222 1.90 0.00 38.77 3.77
3040 3289 4.344865 GCCGTTGCCTCCAGGGAA 62.345 66.667 0.00 0.00 43.49 3.97
3044 3293 4.492604 TTGCCTCCAGGGAAAACG 57.507 55.556 0.00 0.00 42.73 3.60
3045 3294 1.840598 TTGCCTCCAGGGAAAACGA 59.159 52.632 0.00 0.00 42.73 3.85
3046 3295 0.404040 TTGCCTCCAGGGAAAACGAT 59.596 50.000 0.00 0.00 42.73 3.73
3047 3296 1.281419 TGCCTCCAGGGAAAACGATA 58.719 50.000 0.00 0.00 37.23 2.92
3048 3297 1.843851 TGCCTCCAGGGAAAACGATAT 59.156 47.619 0.00 0.00 37.23 1.63
3049 3298 2.158813 TGCCTCCAGGGAAAACGATATC 60.159 50.000 0.00 0.00 37.23 1.63
3050 3299 2.755650 CCTCCAGGGAAAACGATATCG 58.244 52.381 23.18 23.18 40.76 2.92
3051 3300 2.548067 CCTCCAGGGAAAACGATATCGG 60.548 54.545 27.58 10.99 39.77 4.18
3052 3301 1.202604 TCCAGGGAAAACGATATCGGC 60.203 52.381 27.58 13.99 44.95 5.54
3053 3302 0.859232 CAGGGAAAACGATATCGGCG 59.141 55.000 27.58 0.00 44.95 6.46
3054 3303 0.462789 AGGGAAAACGATATCGGCGT 59.537 50.000 27.58 12.60 44.94 5.68
3055 3304 0.857287 GGGAAAACGATATCGGCGTC 59.143 55.000 27.58 19.39 41.75 5.19
3056 3305 1.563111 GGAAAACGATATCGGCGTCA 58.437 50.000 27.58 0.00 41.75 4.35
3057 3306 1.928503 GGAAAACGATATCGGCGTCAA 59.071 47.619 27.58 0.00 41.75 3.18
3058 3307 2.542595 GGAAAACGATATCGGCGTCAAT 59.457 45.455 27.58 7.65 41.75 2.57
3059 3308 3.001939 GGAAAACGATATCGGCGTCAATT 59.998 43.478 27.58 9.32 41.75 2.32
3060 3309 3.854286 AAACGATATCGGCGTCAATTC 57.146 42.857 27.58 0.00 41.75 2.17
3061 3310 2.795175 ACGATATCGGCGTCAATTCT 57.205 45.000 27.58 0.91 44.95 2.40
3062 3311 3.093717 ACGATATCGGCGTCAATTCTT 57.906 42.857 27.58 0.37 44.95 2.52
3063 3312 3.050619 ACGATATCGGCGTCAATTCTTC 58.949 45.455 27.58 0.00 44.95 2.87
3064 3313 3.049912 CGATATCGGCGTCAATTCTTCA 58.950 45.455 17.51 0.00 35.37 3.02
3065 3314 3.675225 CGATATCGGCGTCAATTCTTCAT 59.325 43.478 17.51 0.00 35.37 2.57
3066 3315 4.433413 CGATATCGGCGTCAATTCTTCATG 60.433 45.833 17.51 0.00 35.37 3.07
3067 3316 2.378445 TCGGCGTCAATTCTTCATGA 57.622 45.000 6.85 0.00 0.00 3.07
3068 3317 2.694213 TCGGCGTCAATTCTTCATGAA 58.306 42.857 8.12 8.12 39.24 2.57
3069 3318 3.270027 TCGGCGTCAATTCTTCATGAAT 58.730 40.909 8.96 0.00 46.49 2.57
3070 3319 4.438148 TCGGCGTCAATTCTTCATGAATA 58.562 39.130 8.96 0.00 43.99 1.75
3071 3320 4.873259 TCGGCGTCAATTCTTCATGAATAA 59.127 37.500 8.96 8.71 43.99 1.40
3072 3321 5.527214 TCGGCGTCAATTCTTCATGAATAAT 59.473 36.000 8.96 10.78 43.99 1.28
3073 3322 6.038161 TCGGCGTCAATTCTTCATGAATAATT 59.962 34.615 20.33 20.33 43.99 1.40
3074 3323 6.358030 CGGCGTCAATTCTTCATGAATAATTC 59.642 38.462 22.22 14.40 43.99 2.17
3075 3324 7.195646 GGCGTCAATTCTTCATGAATAATTCA 58.804 34.615 22.22 12.22 43.99 2.57
3076 3325 7.701924 GGCGTCAATTCTTCATGAATAATTCAA 59.298 33.333 22.22 14.06 43.99 2.69
3077 3326 8.526681 GCGTCAATTCTTCATGAATAATTCAAC 58.473 33.333 22.22 20.56 43.99 3.18
3078 3327 9.558648 CGTCAATTCTTCATGAATAATTCAACA 57.441 29.630 22.22 9.37 43.99 3.33
3114 3363 7.582435 AAATAGTTCATCATATAGTTCGGCG 57.418 36.000 0.00 0.00 0.00 6.46
3115 3364 4.585955 AGTTCATCATATAGTTCGGCGT 57.414 40.909 6.85 0.00 0.00 5.68
3116 3365 4.299155 AGTTCATCATATAGTTCGGCGTG 58.701 43.478 6.85 0.00 0.00 5.34
3117 3366 4.049186 GTTCATCATATAGTTCGGCGTGT 58.951 43.478 6.85 0.00 0.00 4.49
3118 3367 4.316205 TCATCATATAGTTCGGCGTGTT 57.684 40.909 6.85 0.00 0.00 3.32
3119 3368 4.689071 TCATCATATAGTTCGGCGTGTTT 58.311 39.130 6.85 0.00 0.00 2.83
3120 3369 5.113383 TCATCATATAGTTCGGCGTGTTTT 58.887 37.500 6.85 0.00 0.00 2.43
3121 3370 5.583061 TCATCATATAGTTCGGCGTGTTTTT 59.417 36.000 6.85 0.00 0.00 1.94
3122 3371 5.211266 TCATATAGTTCGGCGTGTTTTTG 57.789 39.130 6.85 0.00 0.00 2.44
3123 3372 2.325509 ATAGTTCGGCGTGTTTTTGC 57.674 45.000 6.85 0.00 0.00 3.68
3132 3381 3.282831 GCGTGTTTTTGCCTTCATAGT 57.717 42.857 0.00 0.00 0.00 2.12
3133 3382 3.638484 GCGTGTTTTTGCCTTCATAGTT 58.362 40.909 0.00 0.00 0.00 2.24
3134 3383 3.668656 GCGTGTTTTTGCCTTCATAGTTC 59.331 43.478 0.00 0.00 0.00 3.01
3135 3384 4.791411 GCGTGTTTTTGCCTTCATAGTTCA 60.791 41.667 0.00 0.00 0.00 3.18
3136 3385 5.460646 CGTGTTTTTGCCTTCATAGTTCAT 58.539 37.500 0.00 0.00 0.00 2.57
3137 3386 5.569059 CGTGTTTTTGCCTTCATAGTTCATC 59.431 40.000 0.00 0.00 0.00 2.92
3138 3387 6.446318 GTGTTTTTGCCTTCATAGTTCATCA 58.554 36.000 0.00 0.00 0.00 3.07
3139 3388 6.363357 GTGTTTTTGCCTTCATAGTTCATCAC 59.637 38.462 0.00 0.00 0.00 3.06
3140 3389 6.040278 TGTTTTTGCCTTCATAGTTCATCACA 59.960 34.615 0.00 0.00 0.00 3.58
3141 3390 5.885230 TTTGCCTTCATAGTTCATCACAG 57.115 39.130 0.00 0.00 0.00 3.66
3142 3391 4.824479 TGCCTTCATAGTTCATCACAGA 57.176 40.909 0.00 0.00 0.00 3.41
3143 3392 5.164620 TGCCTTCATAGTTCATCACAGAA 57.835 39.130 0.00 0.00 0.00 3.02
3144 3393 5.559770 TGCCTTCATAGTTCATCACAGAAA 58.440 37.500 0.00 0.00 0.00 2.52
3145 3394 6.003326 TGCCTTCATAGTTCATCACAGAAAA 58.997 36.000 0.00 0.00 0.00 2.29
3146 3395 6.660521 TGCCTTCATAGTTCATCACAGAAAAT 59.339 34.615 0.00 0.00 0.00 1.82
3147 3396 7.148188 TGCCTTCATAGTTCATCACAGAAAATC 60.148 37.037 0.00 0.00 0.00 2.17
3148 3397 7.148188 GCCTTCATAGTTCATCACAGAAAATCA 60.148 37.037 0.00 0.00 0.00 2.57
3149 3398 8.733458 CCTTCATAGTTCATCACAGAAAATCAA 58.267 33.333 0.00 0.00 0.00 2.57
3235 3484 9.962759 AAAACTTATATTTCATTACACGTCGTC 57.037 29.630 0.00 0.00 0.00 4.20
3236 3485 7.689953 ACTTATATTTCATTACACGTCGTCC 57.310 36.000 0.00 0.00 0.00 4.79
3237 3486 6.698766 ACTTATATTTCATTACACGTCGTCCC 59.301 38.462 0.00 0.00 0.00 4.46
3238 3487 2.083167 TTTCATTACACGTCGTCCCC 57.917 50.000 0.00 0.00 0.00 4.81
3239 3488 0.109179 TTCATTACACGTCGTCCCCG 60.109 55.000 0.00 0.00 0.00 5.73
3240 3489 1.517694 CATTACACGTCGTCCCCGG 60.518 63.158 0.00 0.00 33.95 5.73
3241 3490 3.360956 ATTACACGTCGTCCCCGGC 62.361 63.158 0.00 0.00 34.69 6.13
3258 3507 2.815647 CGTCGCCCTTGAGCCTTC 60.816 66.667 0.00 0.00 0.00 3.46
3259 3508 2.347490 GTCGCCCTTGAGCCTTCA 59.653 61.111 0.00 0.00 0.00 3.02
3260 3509 1.078143 GTCGCCCTTGAGCCTTCAT 60.078 57.895 0.00 0.00 32.27 2.57
3261 3510 0.178068 GTCGCCCTTGAGCCTTCATA 59.822 55.000 0.00 0.00 32.27 2.15
3262 3511 0.465705 TCGCCCTTGAGCCTTCATAG 59.534 55.000 0.00 0.00 32.27 2.23
3263 3512 0.533755 CGCCCTTGAGCCTTCATAGG 60.534 60.000 0.00 0.00 45.02 2.57
3264 3513 0.548510 GCCCTTGAGCCTTCATAGGT 59.451 55.000 0.00 0.00 44.00 3.08
3265 3514 1.748591 GCCCTTGAGCCTTCATAGGTG 60.749 57.143 0.00 0.00 44.00 4.00
3266 3515 1.673168 CCTTGAGCCTTCATAGGTGC 58.327 55.000 0.00 0.00 44.00 5.01
3267 3516 1.211457 CCTTGAGCCTTCATAGGTGCT 59.789 52.381 0.00 0.00 44.00 4.40
3268 3517 2.356535 CCTTGAGCCTTCATAGGTGCTT 60.357 50.000 0.00 0.00 44.00 3.91
3269 3518 2.698855 TGAGCCTTCATAGGTGCTTC 57.301 50.000 0.00 0.00 44.00 3.86
3270 3519 1.210478 TGAGCCTTCATAGGTGCTTCC 59.790 52.381 0.00 0.00 44.00 3.46
3271 3520 0.548510 AGCCTTCATAGGTGCTTCCC 59.451 55.000 0.00 0.00 44.00 3.97
3272 3521 0.466372 GCCTTCATAGGTGCTTCCCC 60.466 60.000 0.00 0.00 44.00 4.81
3273 3522 0.918983 CCTTCATAGGTGCTTCCCCA 59.081 55.000 0.00 0.00 36.74 4.96
3274 3523 1.408822 CCTTCATAGGTGCTTCCCCAC 60.409 57.143 0.00 0.00 36.74 4.61
3275 3524 1.281867 CTTCATAGGTGCTTCCCCACA 59.718 52.381 0.00 0.00 37.46 4.17
3276 3525 1.595311 TCATAGGTGCTTCCCCACAT 58.405 50.000 0.00 0.00 37.46 3.21
3277 3526 1.490490 TCATAGGTGCTTCCCCACATC 59.510 52.381 0.00 0.00 37.46 3.06
3278 3527 0.469917 ATAGGTGCTTCCCCACATCG 59.530 55.000 0.00 0.00 37.46 3.84
3279 3528 0.907704 TAGGTGCTTCCCCACATCGT 60.908 55.000 0.00 0.00 37.46 3.73
3280 3529 2.040544 GGTGCTTCCCCACATCGTG 61.041 63.158 0.00 0.00 37.46 4.35
3281 3530 1.302511 GTGCTTCCCCACATCGTGT 60.303 57.895 0.00 0.00 35.80 4.49
3282 3531 0.889186 GTGCTTCCCCACATCGTGTT 60.889 55.000 0.00 0.00 35.80 3.32
3283 3532 0.888736 TGCTTCCCCACATCGTGTTG 60.889 55.000 0.00 0.00 0.00 3.33
3284 3533 1.875963 CTTCCCCACATCGTGTTGC 59.124 57.895 0.00 0.00 0.00 4.17
3285 3534 0.888736 CTTCCCCACATCGTGTTGCA 60.889 55.000 0.00 0.00 0.00 4.08
3286 3535 0.888736 TTCCCCACATCGTGTTGCAG 60.889 55.000 0.00 0.00 0.00 4.41
3287 3536 1.600636 CCCCACATCGTGTTGCAGT 60.601 57.895 0.00 0.00 0.00 4.40
3288 3537 1.172180 CCCCACATCGTGTTGCAGTT 61.172 55.000 0.00 0.00 0.00 3.16
3289 3538 0.238289 CCCACATCGTGTTGCAGTTC 59.762 55.000 0.00 0.00 0.00 3.01
3290 3539 1.229428 CCACATCGTGTTGCAGTTCT 58.771 50.000 0.00 0.00 0.00 3.01
3291 3540 1.603802 CCACATCGTGTTGCAGTTCTT 59.396 47.619 0.00 0.00 0.00 2.52
3292 3541 2.602933 CCACATCGTGTTGCAGTTCTTG 60.603 50.000 0.00 0.00 0.00 3.02
3293 3542 2.287644 CACATCGTGTTGCAGTTCTTGA 59.712 45.455 0.00 0.00 0.00 3.02
3294 3543 3.058708 CACATCGTGTTGCAGTTCTTGAT 60.059 43.478 0.00 0.00 0.00 2.57
3295 3544 3.058708 ACATCGTGTTGCAGTTCTTGATG 60.059 43.478 11.65 11.65 38.29 3.07
3296 3545 1.264020 TCGTGTTGCAGTTCTTGATGC 59.736 47.619 0.00 0.00 42.86 3.91
3304 3553 3.881089 TGCAGTTCTTGATGCATCTATGG 59.119 43.478 26.32 13.63 46.97 2.74
3305 3554 3.252701 GCAGTTCTTGATGCATCTATGGG 59.747 47.826 26.32 8.66 42.11 4.00
3306 3555 4.458397 CAGTTCTTGATGCATCTATGGGT 58.542 43.478 26.32 5.86 0.00 4.51
3307 3556 4.514441 CAGTTCTTGATGCATCTATGGGTC 59.486 45.833 26.32 11.29 0.00 4.46
3308 3557 4.411540 AGTTCTTGATGCATCTATGGGTCT 59.588 41.667 26.32 13.09 0.00 3.85
3309 3558 4.613925 TCTTGATGCATCTATGGGTCTC 57.386 45.455 26.32 0.00 0.00 3.36
3310 3559 3.969312 TCTTGATGCATCTATGGGTCTCA 59.031 43.478 26.32 1.53 0.00 3.27
3311 3560 4.040095 TCTTGATGCATCTATGGGTCTCAG 59.960 45.833 26.32 5.25 0.00 3.35
3312 3561 3.580039 TGATGCATCTATGGGTCTCAGA 58.420 45.455 26.32 0.00 0.00 3.27
3313 3562 4.165760 TGATGCATCTATGGGTCTCAGAT 58.834 43.478 26.32 0.00 0.00 2.90
3314 3563 4.222366 TGATGCATCTATGGGTCTCAGATC 59.778 45.833 26.32 0.00 0.00 2.75
3315 3564 3.854437 TGCATCTATGGGTCTCAGATCT 58.146 45.455 0.00 0.00 0.00 2.75
3316 3565 3.831333 TGCATCTATGGGTCTCAGATCTC 59.169 47.826 0.00 0.00 0.00 2.75
3317 3566 3.195396 GCATCTATGGGTCTCAGATCTCC 59.805 52.174 0.00 0.00 0.00 3.71
3318 3567 4.676109 CATCTATGGGTCTCAGATCTCCT 58.324 47.826 0.00 0.00 0.00 3.69
3319 3568 4.111255 TCTATGGGTCTCAGATCTCCTG 57.889 50.000 0.00 0.00 44.27 3.86
3321 3570 2.151502 TGGGTCTCAGATCTCCTGAC 57.848 55.000 0.00 1.49 46.38 3.51
3322 3571 1.028905 GGGTCTCAGATCTCCTGACG 58.971 60.000 0.00 0.00 46.38 4.35
3323 3572 0.383949 GGTCTCAGATCTCCTGACGC 59.616 60.000 0.00 0.00 46.38 5.19
3324 3573 1.098869 GTCTCAGATCTCCTGACGCA 58.901 55.000 0.00 0.00 46.38 5.24
3325 3574 1.680735 GTCTCAGATCTCCTGACGCAT 59.319 52.381 0.00 0.00 46.38 4.73
3326 3575 2.881513 GTCTCAGATCTCCTGACGCATA 59.118 50.000 0.00 0.00 46.38 3.14
3327 3576 3.505680 GTCTCAGATCTCCTGACGCATAT 59.494 47.826 0.00 0.00 46.38 1.78
3328 3577 4.022416 GTCTCAGATCTCCTGACGCATATT 60.022 45.833 0.00 0.00 46.38 1.28
3329 3578 5.182190 GTCTCAGATCTCCTGACGCATATTA 59.818 44.000 0.00 0.00 46.38 0.98
3330 3579 5.770162 TCTCAGATCTCCTGACGCATATTAA 59.230 40.000 0.00 0.00 46.38 1.40
3331 3580 6.018589 TCAGATCTCCTGACGCATATTAAG 57.981 41.667 0.00 0.00 46.38 1.85
3332 3581 5.047731 TCAGATCTCCTGACGCATATTAAGG 60.048 44.000 0.00 0.00 46.38 2.69
3333 3582 4.835615 AGATCTCCTGACGCATATTAAGGT 59.164 41.667 0.00 0.00 0.00 3.50
3334 3583 6.010850 AGATCTCCTGACGCATATTAAGGTA 58.989 40.000 0.00 0.00 0.00 3.08
3335 3584 5.707242 TCTCCTGACGCATATTAAGGTAG 57.293 43.478 0.00 0.00 0.00 3.18
3336 3585 4.523173 TCTCCTGACGCATATTAAGGTAGG 59.477 45.833 0.00 0.00 0.00 3.18
3337 3586 3.006537 TCCTGACGCATATTAAGGTAGGC 59.993 47.826 0.00 0.00 0.00 3.93
3338 3587 3.244078 CCTGACGCATATTAAGGTAGGCA 60.244 47.826 0.00 0.00 31.25 4.75
3339 3588 3.990092 TGACGCATATTAAGGTAGGCAG 58.010 45.455 0.00 0.00 31.25 4.85
3340 3589 3.386726 TGACGCATATTAAGGTAGGCAGT 59.613 43.478 0.00 0.00 31.25 4.40
3341 3590 3.988517 GACGCATATTAAGGTAGGCAGTC 59.011 47.826 0.00 0.00 32.56 3.51
3342 3591 3.244112 ACGCATATTAAGGTAGGCAGTCC 60.244 47.826 0.00 0.00 31.25 3.85
3343 3592 3.244078 CGCATATTAAGGTAGGCAGTCCA 60.244 47.826 0.00 0.00 31.25 4.02
3344 3593 4.319177 GCATATTAAGGTAGGCAGTCCAG 58.681 47.826 0.00 0.00 32.05 3.86
3345 3594 4.804261 GCATATTAAGGTAGGCAGTCCAGG 60.804 50.000 0.00 0.00 32.05 4.45
3346 3595 2.337359 TTAAGGTAGGCAGTCCAGGT 57.663 50.000 0.00 0.00 33.74 4.00
3347 3596 2.337359 TAAGGTAGGCAGTCCAGGTT 57.663 50.000 0.00 0.00 33.74 3.50
3348 3597 0.693049 AAGGTAGGCAGTCCAGGTTG 59.307 55.000 0.00 0.00 33.74 3.77
3349 3598 1.377333 GGTAGGCAGTCCAGGTTGC 60.377 63.158 9.45 9.45 39.56 4.17
3353 3602 4.643387 GCAGTCCAGGTTGCCGGT 62.643 66.667 1.90 0.00 34.28 5.28
3354 3603 3.065306 CAGTCCAGGTTGCCGGTA 58.935 61.111 1.90 0.00 0.00 4.02
3355 3604 1.079127 CAGTCCAGGTTGCCGGTAG 60.079 63.158 1.90 0.00 0.00 3.18
3356 3605 2.436115 GTCCAGGTTGCCGGTAGC 60.436 66.667 1.90 0.00 44.14 3.58
3357 3606 2.606519 TCCAGGTTGCCGGTAGCT 60.607 61.111 1.90 3.71 44.23 3.32
3358 3607 2.436646 CCAGGTTGCCGGTAGCTG 60.437 66.667 22.92 22.92 44.23 4.24
3359 3608 2.436646 CAGGTTGCCGGTAGCTGG 60.437 66.667 22.43 6.71 44.23 4.85
3360 3609 2.928396 AGGTTGCCGGTAGCTGGT 60.928 61.111 1.90 0.00 44.23 4.00
3361 3610 2.746277 GGTTGCCGGTAGCTGGTG 60.746 66.667 1.90 0.00 44.23 4.17
3362 3611 2.345991 GTTGCCGGTAGCTGGTGA 59.654 61.111 1.90 0.00 44.23 4.02
3363 3612 1.078426 GTTGCCGGTAGCTGGTGAT 60.078 57.895 1.90 0.00 44.23 3.06
3364 3613 1.090052 GTTGCCGGTAGCTGGTGATC 61.090 60.000 1.90 0.00 44.23 2.92
3365 3614 1.549243 TTGCCGGTAGCTGGTGATCA 61.549 55.000 1.90 0.00 44.23 2.92
3366 3615 1.220749 GCCGGTAGCTGGTGATCAA 59.779 57.895 1.90 0.00 38.99 2.57
3367 3616 1.090052 GCCGGTAGCTGGTGATCAAC 61.090 60.000 2.98 2.98 38.99 3.18
3368 3617 0.537188 CCGGTAGCTGGTGATCAACT 59.463 55.000 12.94 3.32 0.00 3.16
3369 3618 1.066143 CCGGTAGCTGGTGATCAACTT 60.066 52.381 12.94 0.28 0.00 2.66
3370 3619 2.002586 CGGTAGCTGGTGATCAACTTG 58.997 52.381 12.94 6.15 0.00 3.16
3371 3620 2.359900 GGTAGCTGGTGATCAACTTGG 58.640 52.381 12.94 3.59 0.00 3.61
3372 3621 2.359900 GTAGCTGGTGATCAACTTGGG 58.640 52.381 12.94 1.09 0.00 4.12
3373 3622 0.610232 AGCTGGTGATCAACTTGGGC 60.610 55.000 12.94 10.78 0.00 5.36
3374 3623 0.895100 GCTGGTGATCAACTTGGGCA 60.895 55.000 12.94 0.00 0.00 5.36
3375 3624 1.619654 CTGGTGATCAACTTGGGCAA 58.380 50.000 12.94 0.00 0.00 4.52
3376 3625 1.542915 CTGGTGATCAACTTGGGCAAG 59.457 52.381 12.94 0.00 43.79 4.01
3377 3626 1.144708 TGGTGATCAACTTGGGCAAGA 59.855 47.619 12.94 0.00 40.79 3.02
3378 3627 1.815003 GGTGATCAACTTGGGCAAGAG 59.185 52.381 2.64 0.00 40.79 2.85
3379 3628 1.815003 GTGATCAACTTGGGCAAGAGG 59.185 52.381 0.00 0.00 40.79 3.69
3380 3629 1.704628 TGATCAACTTGGGCAAGAGGA 59.295 47.619 0.00 0.00 40.79 3.71
3381 3630 2.309755 TGATCAACTTGGGCAAGAGGAT 59.690 45.455 0.00 0.00 40.79 3.24
3382 3631 2.496899 TCAACTTGGGCAAGAGGATC 57.503 50.000 0.00 0.00 40.79 3.36
3383 3632 1.004745 TCAACTTGGGCAAGAGGATCC 59.995 52.381 2.48 2.48 40.79 3.36
3384 3633 1.005215 CAACTTGGGCAAGAGGATCCT 59.995 52.381 16.13 16.13 40.79 3.24
3385 3634 0.622665 ACTTGGGCAAGAGGATCCTG 59.377 55.000 22.02 7.11 40.79 3.86
3386 3635 0.750911 CTTGGGCAAGAGGATCCTGC 60.751 60.000 22.02 17.60 40.79 4.85
3387 3636 2.194326 GGGCAAGAGGATCCTGCC 59.806 66.667 27.71 27.71 44.31 4.85
3388 3637 2.381941 GGGCAAGAGGATCCTGCCT 61.382 63.158 31.67 17.83 44.44 4.75
3389 3638 1.153005 GGCAAGAGGATCCTGCCTG 60.153 63.158 28.11 18.86 41.99 4.85
3390 3639 1.606531 GCAAGAGGATCCTGCCTGT 59.393 57.895 22.02 0.00 38.73 4.00
3391 3640 0.833287 GCAAGAGGATCCTGCCTGTA 59.167 55.000 22.02 0.00 38.73 2.74
3392 3641 1.210478 GCAAGAGGATCCTGCCTGTAA 59.790 52.381 22.02 0.00 38.73 2.41
3393 3642 2.158696 GCAAGAGGATCCTGCCTGTAAT 60.159 50.000 22.02 0.00 38.73 1.89
3394 3643 3.071602 GCAAGAGGATCCTGCCTGTAATA 59.928 47.826 22.02 0.00 38.73 0.98
3395 3644 4.263243 GCAAGAGGATCCTGCCTGTAATAT 60.263 45.833 22.02 0.00 38.73 1.28
3396 3645 5.243981 CAAGAGGATCCTGCCTGTAATATG 58.756 45.833 22.02 1.13 38.73 1.78
3397 3646 3.843027 AGAGGATCCTGCCTGTAATATGG 59.157 47.826 22.02 0.00 38.73 2.74
3398 3647 3.584848 GAGGATCCTGCCTGTAATATGGT 59.415 47.826 22.02 0.00 38.73 3.55
3399 3648 3.983410 AGGATCCTGCCTGTAATATGGTT 59.017 43.478 15.29 0.00 36.76 3.67
3400 3649 4.042187 AGGATCCTGCCTGTAATATGGTTC 59.958 45.833 15.29 0.00 36.76 3.62
3401 3650 4.042187 GGATCCTGCCTGTAATATGGTTCT 59.958 45.833 3.84 0.00 0.00 3.01
3402 3651 4.422073 TCCTGCCTGTAATATGGTTCTG 57.578 45.455 0.00 0.00 0.00 3.02
3403 3652 3.780294 TCCTGCCTGTAATATGGTTCTGT 59.220 43.478 0.00 0.00 0.00 3.41
3404 3653 3.879295 CCTGCCTGTAATATGGTTCTGTG 59.121 47.826 0.00 0.00 0.00 3.66
3405 3654 4.517285 CTGCCTGTAATATGGTTCTGTGT 58.483 43.478 0.00 0.00 0.00 3.72
3406 3655 4.513442 TGCCTGTAATATGGTTCTGTGTC 58.487 43.478 0.00 0.00 0.00 3.67
3407 3656 4.019771 TGCCTGTAATATGGTTCTGTGTCA 60.020 41.667 0.00 0.00 0.00 3.58
3408 3657 4.941263 GCCTGTAATATGGTTCTGTGTCAA 59.059 41.667 0.00 0.00 0.00 3.18
3409 3658 5.414454 GCCTGTAATATGGTTCTGTGTCAAA 59.586 40.000 0.00 0.00 0.00 2.69
3410 3659 6.622896 GCCTGTAATATGGTTCTGTGTCAAAC 60.623 42.308 0.00 0.00 0.00 2.93
3411 3660 6.429692 CCTGTAATATGGTTCTGTGTCAAACA 59.570 38.462 0.00 0.00 37.22 2.83
3423 3672 4.965119 GTGTCAAACACTGGTTCTTTCT 57.035 40.909 3.03 0.00 45.27 2.52
3424 3673 4.662145 GTGTCAAACACTGGTTCTTTCTG 58.338 43.478 3.03 0.00 45.27 3.02
3425 3674 3.128589 TGTCAAACACTGGTTCTTTCTGC 59.871 43.478 0.00 0.00 35.82 4.26
3426 3675 3.378427 GTCAAACACTGGTTCTTTCTGCT 59.622 43.478 0.00 0.00 35.82 4.24
3427 3676 3.627577 TCAAACACTGGTTCTTTCTGCTC 59.372 43.478 0.00 0.00 35.82 4.26
3428 3677 1.871080 ACACTGGTTCTTTCTGCTCG 58.129 50.000 0.00 0.00 0.00 5.03
3429 3678 0.514691 CACTGGTTCTTTCTGCTCGC 59.485 55.000 0.00 0.00 0.00 5.03
3430 3679 0.394565 ACTGGTTCTTTCTGCTCGCT 59.605 50.000 0.00 0.00 0.00 4.93
3431 3680 1.074752 CTGGTTCTTTCTGCTCGCTC 58.925 55.000 0.00 0.00 0.00 5.03
3432 3681 0.681733 TGGTTCTTTCTGCTCGCTCT 59.318 50.000 0.00 0.00 0.00 4.09
3433 3682 1.337260 TGGTTCTTTCTGCTCGCTCTC 60.337 52.381 0.00 0.00 0.00 3.20
3434 3683 1.337260 GGTTCTTTCTGCTCGCTCTCA 60.337 52.381 0.00 0.00 0.00 3.27
3435 3684 2.408050 GTTCTTTCTGCTCGCTCTCAA 58.592 47.619 0.00 0.00 0.00 3.02
3436 3685 2.999355 GTTCTTTCTGCTCGCTCTCAAT 59.001 45.455 0.00 0.00 0.00 2.57
3437 3686 2.614779 TCTTTCTGCTCGCTCTCAATG 58.385 47.619 0.00 0.00 0.00 2.82
3438 3687 2.232208 TCTTTCTGCTCGCTCTCAATGA 59.768 45.455 0.00 0.00 0.00 2.57
3439 3688 2.975732 TTCTGCTCGCTCTCAATGAT 57.024 45.000 0.00 0.00 0.00 2.45
3440 3689 2.505628 TCTGCTCGCTCTCAATGATC 57.494 50.000 0.00 0.00 0.00 2.92
3441 3690 1.753073 TCTGCTCGCTCTCAATGATCA 59.247 47.619 0.00 0.00 0.00 2.92
3442 3691 2.364647 TCTGCTCGCTCTCAATGATCAT 59.635 45.455 1.18 1.18 0.00 2.45
3443 3692 2.476997 CTGCTCGCTCTCAATGATCATG 59.523 50.000 9.46 3.97 0.00 3.07
3444 3693 2.159000 TGCTCGCTCTCAATGATCATGT 60.159 45.455 9.46 0.00 0.00 3.21
3445 3694 2.871022 GCTCGCTCTCAATGATCATGTT 59.129 45.455 9.46 0.00 0.00 2.71
3446 3695 3.303197 GCTCGCTCTCAATGATCATGTTG 60.303 47.826 9.46 5.81 0.00 3.33
3447 3696 3.865446 TCGCTCTCAATGATCATGTTGT 58.135 40.909 9.46 0.00 0.00 3.32
3448 3697 3.619929 TCGCTCTCAATGATCATGTTGTG 59.380 43.478 9.46 6.85 0.00 3.33
3449 3698 3.692576 GCTCTCAATGATCATGTTGTGC 58.307 45.455 9.46 10.40 0.00 4.57
3450 3699 3.128068 GCTCTCAATGATCATGTTGTGCA 59.872 43.478 9.46 0.00 0.00 4.57
3451 3700 4.380128 GCTCTCAATGATCATGTTGTGCAA 60.380 41.667 9.46 0.00 0.00 4.08
3452 3701 5.305139 TCTCAATGATCATGTTGTGCAAG 57.695 39.130 9.46 0.00 0.00 4.01
3453 3702 5.005094 TCTCAATGATCATGTTGTGCAAGA 58.995 37.500 9.46 1.98 0.00 3.02
3454 3703 5.650703 TCTCAATGATCATGTTGTGCAAGAT 59.349 36.000 9.46 0.00 38.13 2.40
3455 3704 5.646606 TCAATGATCATGTTGTGCAAGATG 58.353 37.500 9.46 13.71 41.71 2.90
3459 3708 3.902261 TCATGTTGTGCAAGATGACAC 57.098 42.857 17.21 0.00 43.38 3.67
3460 3709 3.212685 TCATGTTGTGCAAGATGACACA 58.787 40.909 17.21 0.00 43.38 3.72
3465 3714 3.696281 TGTGCAAGATGACACAACAAG 57.304 42.857 0.00 0.00 43.48 3.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.323979 ACCCGTAAAAGATCTGTGTGTCT 59.676 43.478 0.00 0.00 0.00 3.41
1 2 3.660865 ACCCGTAAAAGATCTGTGTGTC 58.339 45.455 0.00 0.00 0.00 3.67
2 3 3.764237 ACCCGTAAAAGATCTGTGTGT 57.236 42.857 0.00 0.00 0.00 3.72
3 4 4.315803 AGAACCCGTAAAAGATCTGTGTG 58.684 43.478 0.00 0.00 0.00 3.82
4 5 4.618920 AGAACCCGTAAAAGATCTGTGT 57.381 40.909 0.00 0.00 0.00 3.72
5 6 6.395629 TCTAAGAACCCGTAAAAGATCTGTG 58.604 40.000 0.00 0.00 0.00 3.66
6 7 6.436532 TCTCTAAGAACCCGTAAAAGATCTGT 59.563 38.462 0.00 0.00 0.00 3.41
7 8 6.864342 TCTCTAAGAACCCGTAAAAGATCTG 58.136 40.000 0.00 0.00 0.00 2.90
8 9 7.477945 TTCTCTAAGAACCCGTAAAAGATCT 57.522 36.000 0.00 0.00 0.00 2.75
9 10 8.719560 ATTTCTCTAAGAACCCGTAAAAGATC 57.280 34.615 0.00 0.00 33.26 2.75
10 11 9.163899 GAATTTCTCTAAGAACCCGTAAAAGAT 57.836 33.333 0.00 0.00 33.26 2.40
11 12 8.152246 TGAATTTCTCTAAGAACCCGTAAAAGA 58.848 33.333 0.00 0.00 33.26 2.52
12 13 8.319143 TGAATTTCTCTAAGAACCCGTAAAAG 57.681 34.615 0.00 0.00 33.26 2.27
13 14 8.857694 ATGAATTTCTCTAAGAACCCGTAAAA 57.142 30.769 0.00 0.00 33.26 1.52
14 15 8.726988 CAATGAATTTCTCTAAGAACCCGTAAA 58.273 33.333 0.00 0.00 33.26 2.01
15 16 7.335924 CCAATGAATTTCTCTAAGAACCCGTAA 59.664 37.037 0.00 0.00 33.26 3.18
16 17 6.821665 CCAATGAATTTCTCTAAGAACCCGTA 59.178 38.462 0.00 0.00 33.26 4.02
17 18 5.648092 CCAATGAATTTCTCTAAGAACCCGT 59.352 40.000 0.00 0.00 33.26 5.28
18 19 5.648092 ACCAATGAATTTCTCTAAGAACCCG 59.352 40.000 0.00 0.00 33.26 5.28
19 20 7.363007 GGAACCAATGAATTTCTCTAAGAACCC 60.363 40.741 0.00 0.00 33.26 4.11
20 21 7.394641 AGGAACCAATGAATTTCTCTAAGAACC 59.605 37.037 0.00 0.00 33.26 3.62
21 22 8.341892 AGGAACCAATGAATTTCTCTAAGAAC 57.658 34.615 0.00 0.00 33.26 3.01
22 23 8.940397 AAGGAACCAATGAATTTCTCTAAGAA 57.060 30.769 0.00 0.00 31.28 2.52
23 24 8.796475 CAAAGGAACCAATGAATTTCTCTAAGA 58.204 33.333 0.00 0.00 0.00 2.10
24 25 7.543520 GCAAAGGAACCAATGAATTTCTCTAAG 59.456 37.037 0.00 0.00 0.00 2.18
25 26 7.378181 GCAAAGGAACCAATGAATTTCTCTAA 58.622 34.615 0.00 0.00 0.00 2.10
26 27 6.071391 GGCAAAGGAACCAATGAATTTCTCTA 60.071 38.462 0.00 0.00 0.00 2.43
27 28 5.279657 GGCAAAGGAACCAATGAATTTCTCT 60.280 40.000 0.00 0.00 0.00 3.10
28 29 4.931601 GGCAAAGGAACCAATGAATTTCTC 59.068 41.667 0.00 0.00 0.00 2.87
29 30 4.594491 AGGCAAAGGAACCAATGAATTTCT 59.406 37.500 0.00 0.00 0.00 2.52
30 31 4.898320 AGGCAAAGGAACCAATGAATTTC 58.102 39.130 0.00 0.00 0.00 2.17
31 32 4.980339 AGGCAAAGGAACCAATGAATTT 57.020 36.364 0.00 0.00 0.00 1.82
32 33 6.098266 GGTATAGGCAAAGGAACCAATGAATT 59.902 38.462 0.00 0.00 0.00 2.17
33 34 5.598417 GGTATAGGCAAAGGAACCAATGAAT 59.402 40.000 0.00 0.00 0.00 2.57
34 35 4.953579 GGTATAGGCAAAGGAACCAATGAA 59.046 41.667 0.00 0.00 0.00 2.57
35 36 4.017958 TGGTATAGGCAAAGGAACCAATGA 60.018 41.667 0.00 0.00 34.20 2.57
36 37 4.097892 GTGGTATAGGCAAAGGAACCAATG 59.902 45.833 0.00 0.00 38.64 2.82
37 38 4.017499 AGTGGTATAGGCAAAGGAACCAAT 60.017 41.667 0.00 0.00 38.64 3.16
38 39 3.332485 AGTGGTATAGGCAAAGGAACCAA 59.668 43.478 0.00 0.00 38.64 3.67
39 40 2.916934 AGTGGTATAGGCAAAGGAACCA 59.083 45.455 0.00 0.00 34.73 3.67
40 41 3.646736 AGTGGTATAGGCAAAGGAACC 57.353 47.619 0.00 0.00 0.00 3.62
41 42 4.844884 AGAAGTGGTATAGGCAAAGGAAC 58.155 43.478 0.00 0.00 0.00 3.62
42 43 5.514500 AAGAAGTGGTATAGGCAAAGGAA 57.486 39.130 0.00 0.00 0.00 3.36
43 44 5.253330 CAAAGAAGTGGTATAGGCAAAGGA 58.747 41.667 0.00 0.00 0.00 3.36
44 45 4.142381 GCAAAGAAGTGGTATAGGCAAAGG 60.142 45.833 0.00 0.00 0.00 3.11
45 46 4.142381 GGCAAAGAAGTGGTATAGGCAAAG 60.142 45.833 0.00 0.00 0.00 2.77
46 47 3.761752 GGCAAAGAAGTGGTATAGGCAAA 59.238 43.478 0.00 0.00 0.00 3.68
47 48 3.010138 AGGCAAAGAAGTGGTATAGGCAA 59.990 43.478 0.00 0.00 0.00 4.52
48 49 2.576191 AGGCAAAGAAGTGGTATAGGCA 59.424 45.455 0.00 0.00 0.00 4.75
49 50 3.283259 AGGCAAAGAAGTGGTATAGGC 57.717 47.619 0.00 0.00 0.00 3.93
50 51 3.947834 CCAAGGCAAAGAAGTGGTATAGG 59.052 47.826 0.00 0.00 0.00 2.57
51 52 3.947834 CCCAAGGCAAAGAAGTGGTATAG 59.052 47.826 0.00 0.00 0.00 1.31
52 53 3.332485 ACCCAAGGCAAAGAAGTGGTATA 59.668 43.478 0.00 0.00 0.00 1.47
53 54 2.110011 ACCCAAGGCAAAGAAGTGGTAT 59.890 45.455 0.00 0.00 0.00 2.73
54 55 1.497286 ACCCAAGGCAAAGAAGTGGTA 59.503 47.619 0.00 0.00 0.00 3.25
55 56 0.261696 ACCCAAGGCAAAGAAGTGGT 59.738 50.000 0.00 0.00 0.00 4.16
56 57 0.675633 CACCCAAGGCAAAGAAGTGG 59.324 55.000 0.00 0.00 0.00 4.00
57 58 1.338020 GTCACCCAAGGCAAAGAAGTG 59.662 52.381 0.00 0.00 0.00 3.16
58 59 1.064017 TGTCACCCAAGGCAAAGAAGT 60.064 47.619 0.00 0.00 0.00 3.01
59 60 1.691196 TGTCACCCAAGGCAAAGAAG 58.309 50.000 0.00 0.00 0.00 2.85
60 61 1.962807 CATGTCACCCAAGGCAAAGAA 59.037 47.619 0.00 0.00 0.00 2.52
156 157 7.684529 ACTCAGGAGTAGAAGAACATTTTCAT 58.315 34.615 0.00 0.00 40.43 2.57
157 158 7.067496 ACTCAGGAGTAGAAGAACATTTTCA 57.933 36.000 0.00 0.00 40.43 2.69
162 168 6.672266 TTGAACTCAGGAGTAGAAGAACAT 57.328 37.500 1.78 0.00 41.58 2.71
167 173 5.580297 GCTCATTTGAACTCAGGAGTAGAAG 59.420 44.000 1.78 0.00 41.58 2.85
170 176 5.083533 AGCTCATTTGAACTCAGGAGTAG 57.916 43.478 1.78 0.00 41.58 2.57
172 178 3.616076 CGAGCTCATTTGAACTCAGGAGT 60.616 47.826 15.40 0.00 44.94 3.85
177 183 2.612972 GGTCCGAGCTCATTTGAACTCA 60.613 50.000 15.40 0.00 37.17 3.41
181 187 1.404181 CGAGGTCCGAGCTCATTTGAA 60.404 52.381 23.73 0.00 42.53 2.69
183 189 0.807667 CCGAGGTCCGAGCTCATTTG 60.808 60.000 23.73 9.98 42.53 2.32
190 196 1.227002 GTTCATCCGAGGTCCGAGC 60.227 63.158 0.00 0.00 41.76 5.03
193 199 1.134818 TCATTGTTCATCCGAGGTCCG 60.135 52.381 0.00 0.00 38.18 4.79
194 200 2.691409 TCATTGTTCATCCGAGGTCC 57.309 50.000 0.00 0.00 0.00 4.46
195 201 4.260375 CGATTTCATTGTTCATCCGAGGTC 60.260 45.833 0.00 0.00 0.00 3.85
196 202 3.623060 CGATTTCATTGTTCATCCGAGGT 59.377 43.478 0.00 0.00 0.00 3.85
197 203 3.871006 TCGATTTCATTGTTCATCCGAGG 59.129 43.478 0.00 0.00 0.00 4.63
198 204 5.469373 TTCGATTTCATTGTTCATCCGAG 57.531 39.130 0.00 0.00 0.00 4.63
199 205 5.584251 TCATTCGATTTCATTGTTCATCCGA 59.416 36.000 0.00 0.00 0.00 4.55
200 206 5.809464 TCATTCGATTTCATTGTTCATCCG 58.191 37.500 0.00 0.00 0.00 4.18
234 240 9.705290 GGTTACCACACAAAATAATCAGATTTT 57.295 29.630 0.00 0.00 39.13 1.82
235 241 9.088987 AGGTTACCACACAAAATAATCAGATTT 57.911 29.630 3.51 0.00 0.00 2.17
236 242 8.650143 AGGTTACCACACAAAATAATCAGATT 57.350 30.769 3.51 0.20 0.00 2.40
237 243 8.650143 AAGGTTACCACACAAAATAATCAGAT 57.350 30.769 3.51 0.00 0.00 2.90
238 244 8.356657 CAAAGGTTACCACACAAAATAATCAGA 58.643 33.333 3.51 0.00 0.00 3.27
239 245 8.356657 TCAAAGGTTACCACACAAAATAATCAG 58.643 33.333 3.51 0.00 0.00 2.90
240 246 8.138712 GTCAAAGGTTACCACACAAAATAATCA 58.861 33.333 3.51 0.00 0.00 2.57
241 247 8.138712 TGTCAAAGGTTACCACACAAAATAATC 58.861 33.333 3.51 0.00 0.00 1.75
242 248 8.012957 TGTCAAAGGTTACCACACAAAATAAT 57.987 30.769 3.51 0.00 0.00 1.28
243 249 7.406031 TGTCAAAGGTTACCACACAAAATAA 57.594 32.000 3.51 0.00 0.00 1.40
244 250 7.406031 TTGTCAAAGGTTACCACACAAAATA 57.594 32.000 3.51 0.00 0.00 1.40
245 251 5.923733 TGTCAAAGGTTACCACACAAAAT 57.076 34.783 3.51 0.00 0.00 1.82
246 252 5.723672 TTGTCAAAGGTTACCACACAAAA 57.276 34.783 3.51 0.00 0.00 2.44
296 302 3.913548 TCCACAAATGTCATTTCGTGG 57.086 42.857 30.30 30.30 44.09 4.94
308 314 4.686191 TTTTGCCATGACTTCCACAAAT 57.314 36.364 0.00 0.00 0.00 2.32
336 342 8.306761 GGAATCATTTTGGAGTACTGATTTTGT 58.693 33.333 0.00 0.00 36.85 2.83
337 343 8.306038 TGGAATCATTTTGGAGTACTGATTTTG 58.694 33.333 0.00 0.00 36.85 2.44
342 348 7.831691 TTTTGGAATCATTTTGGAGTACTGA 57.168 32.000 0.00 0.00 0.00 3.41
401 407 6.262049 TGAATGAAAATTTCTGGAAGTCGTGA 59.738 34.615 7.29 0.00 33.76 4.35
433 440 7.367285 ACAAATGTCTATGTGCGTACAAAAAT 58.633 30.769 11.22 0.00 40.84 1.82
440 447 5.121611 CCTTTGACAAATGTCTATGTGCGTA 59.878 40.000 14.15 0.00 44.99 4.42
442 449 4.154015 TCCTTTGACAAATGTCTATGTGCG 59.846 41.667 14.15 0.00 44.99 5.34
510 518 7.884257 TGCTTATGATGAACAGTGAAATCAAA 58.116 30.769 0.00 1.10 33.06 2.69
511 519 7.451501 TGCTTATGATGAACAGTGAAATCAA 57.548 32.000 0.00 0.00 33.06 2.57
514 522 8.525316 TCAAATGCTTATGATGAACAGTGAAAT 58.475 29.630 0.00 0.00 0.00 2.17
518 526 6.032094 GGTCAAATGCTTATGATGAACAGTG 58.968 40.000 0.00 0.00 0.00 3.66
527 535 2.238646 ACCCGAGGTCAAATGCTTATGA 59.761 45.455 0.00 0.00 0.00 2.15
528 536 2.355756 CACCCGAGGTCAAATGCTTATG 59.644 50.000 0.00 0.00 31.02 1.90
530 538 1.948611 GCACCCGAGGTCAAATGCTTA 60.949 52.381 0.00 0.00 31.02 3.09
541 549 1.379527 GGAAGTATTTGCACCCGAGG 58.620 55.000 0.00 0.00 0.00 4.63
546 554 1.092348 GGACGGGAAGTATTTGCACC 58.908 55.000 0.00 0.00 0.00 5.01
555 563 3.368116 CGAGAAGTATTTGGACGGGAAGT 60.368 47.826 0.00 0.00 0.00 3.01
560 568 2.537401 GGACGAGAAGTATTTGGACGG 58.463 52.381 0.00 0.00 0.00 4.79
615 666 3.050354 TTGTGGTGTTGGGAGCGGT 62.050 57.895 0.00 0.00 0.00 5.68
635 686 1.076332 GTGATCAAACCCCGAAGACG 58.924 55.000 0.00 0.00 39.43 4.18
636 687 2.474410 AGTGATCAAACCCCGAAGAC 57.526 50.000 0.00 0.00 0.00 3.01
644 695 1.463444 CCCGTTCGAAGTGATCAAACC 59.537 52.381 0.00 0.00 0.00 3.27
689 773 4.336713 GGGAATGAGAAATGAGCTGGTAAC 59.663 45.833 0.00 0.00 0.00 2.50
698 782 4.728772 AGTGTTGTGGGAATGAGAAATGA 58.271 39.130 0.00 0.00 0.00 2.57
715 799 0.184933 TGGGCCAGCTTGTTAGTGTT 59.815 50.000 0.00 0.00 0.00 3.32
779 887 1.593209 GGACCGCAACGTCAGTGAA 60.593 57.895 0.00 0.00 34.24 3.18
804 912 1.069500 CCGTTGGATTCGTTTGGTCAC 60.069 52.381 0.00 0.00 0.00 3.67
807 915 1.520600 GGCCGTTGGATTCGTTTGGT 61.521 55.000 0.00 0.00 0.00 3.67
844 952 4.157120 GTGGACGGTCGGGATGGG 62.157 72.222 1.43 0.00 0.00 4.00
1623 1734 8.723942 ATGACGCTTCTAATCAATTAAAGAGT 57.276 30.769 10.58 10.58 32.41 3.24
1639 1750 9.798885 GATAGATTAACAAACATATGACGCTTC 57.201 33.333 10.38 0.00 0.00 3.86
1641 1752 8.887036 TGATAGATTAACAAACATATGACGCT 57.113 30.769 10.38 0.00 0.00 5.07
1642 1753 9.929722 TTTGATAGATTAACAAACATATGACGC 57.070 29.630 10.38 0.00 0.00 5.19
1678 1823 5.350091 GCTCAAAGACAGAATGAGTTCCTAC 59.650 44.000 4.19 0.00 42.00 3.18
1696 1841 3.822735 CAGGAGACATTTCAAGGCTCAAA 59.177 43.478 0.00 0.00 0.00 2.69
2043 2255 1.097232 TCAAAAGCATGAGGCCATCG 58.903 50.000 5.01 0.00 46.50 3.84
2105 2317 6.823689 GGAGCTTGATCCTACATAAACAGAAA 59.176 38.462 0.00 0.00 36.35 2.52
2117 2329 1.413662 CCAGAGGGGAGCTTGATCCTA 60.414 57.143 4.86 0.00 40.01 2.94
2264 2476 2.746277 CCACGCACCTTAGGCCAC 60.746 66.667 5.01 0.00 0.00 5.01
2490 2702 3.118592 ACAGGTAATCTAGAGGCAGCAAC 60.119 47.826 0.00 0.00 0.00 4.17
2510 2722 4.019792 ACTGCAATACATGTCCTTGACA 57.980 40.909 19.82 15.88 46.90 3.58
2646 2861 4.451435 GGCTAACTCAAGTAACTGGACAAC 59.549 45.833 0.00 0.00 0.00 3.32
2652 2867 3.600388 CAGGGGCTAACTCAAGTAACTG 58.400 50.000 0.00 0.00 0.00 3.16
2657 2872 0.693049 CACCAGGGGCTAACTCAAGT 59.307 55.000 0.00 0.00 0.00 3.16
2719 2934 8.106247 TCAACCAAACAAGTTTATAGATCCAC 57.894 34.615 0.00 0.00 0.00 4.02
2761 2982 7.783090 ACATCAGATAGAAGCAAACATACTG 57.217 36.000 0.00 0.00 0.00 2.74
2762 2983 8.798859 AAACATCAGATAGAAGCAAACATACT 57.201 30.769 0.00 0.00 0.00 2.12
2818 3066 9.073475 ACAAGTGATGTAAAAAGCAGGTATTTA 57.927 29.630 0.00 0.00 41.63 1.40
2839 3087 2.227194 GACGGGTGATTTTGGACAAGT 58.773 47.619 0.00 0.00 0.00 3.16
2843 3091 1.268625 GTTGGACGGGTGATTTTGGAC 59.731 52.381 0.00 0.00 0.00 4.02
2844 3092 1.133761 TGTTGGACGGGTGATTTTGGA 60.134 47.619 0.00 0.00 0.00 3.53
2866 3114 6.251376 CCGAACAAATTTACATTTAGCTCAGC 59.749 38.462 0.00 0.00 30.90 4.26
2872 3120 6.959311 CGTCCTCCGAACAAATTTACATTTAG 59.041 38.462 0.00 0.00 39.56 1.85
2890 3138 0.971386 TTTACCTCACCACGTCCTCC 59.029 55.000 0.00 0.00 0.00 4.30
2894 3142 1.467342 GCCATTTTACCTCACCACGTC 59.533 52.381 0.00 0.00 0.00 4.34
2904 3152 1.897423 GGTGGGCAGCCATTTTACC 59.103 57.895 15.19 9.35 0.00 2.85
2932 3181 5.131784 GCTCTAAGTACCTAGAGGCAGTTA 58.868 45.833 23.81 0.00 43.52 2.24
2944 3193 2.036604 GGCTGGAGATGCTCTAAGTACC 59.963 54.545 0.00 0.00 0.00 3.34
2976 3225 2.124507 TTTTGCCTCCTCGACCCCAG 62.125 60.000 0.00 0.00 0.00 4.45
2977 3226 1.497309 ATTTTGCCTCCTCGACCCCA 61.497 55.000 0.00 0.00 0.00 4.96
2978 3227 0.323451 AATTTTGCCTCCTCGACCCC 60.323 55.000 0.00 0.00 0.00 4.95
2979 3228 0.811281 CAATTTTGCCTCCTCGACCC 59.189 55.000 0.00 0.00 0.00 4.46
2980 3229 1.468914 GACAATTTTGCCTCCTCGACC 59.531 52.381 0.00 0.00 0.00 4.79
2981 3230 2.416893 GAGACAATTTTGCCTCCTCGAC 59.583 50.000 0.00 0.00 32.35 4.20
2982 3231 2.303022 AGAGACAATTTTGCCTCCTCGA 59.697 45.455 3.38 0.00 38.29 4.04
2983 3232 2.417933 CAGAGACAATTTTGCCTCCTCG 59.582 50.000 3.38 0.00 38.29 4.63
2984 3233 2.751806 CCAGAGACAATTTTGCCTCCTC 59.248 50.000 3.38 0.00 38.29 3.71
2985 3234 2.556114 CCCAGAGACAATTTTGCCTCCT 60.556 50.000 3.38 0.00 38.29 3.69
2986 3235 1.821136 CCCAGAGACAATTTTGCCTCC 59.179 52.381 3.38 0.00 38.29 4.30
2987 3236 1.821136 CCCCAGAGACAATTTTGCCTC 59.179 52.381 0.00 0.00 37.87 4.70
2988 3237 1.928868 CCCCAGAGACAATTTTGCCT 58.071 50.000 0.00 0.00 0.00 4.75
2989 3238 0.247460 GCCCCAGAGACAATTTTGCC 59.753 55.000 0.00 0.00 0.00 4.52
2990 3239 0.247460 GGCCCCAGAGACAATTTTGC 59.753 55.000 0.00 0.00 0.00 3.68
2991 3240 0.527565 CGGCCCCAGAGACAATTTTG 59.472 55.000 0.00 0.00 0.00 2.44
2992 3241 0.611896 CCGGCCCCAGAGACAATTTT 60.612 55.000 0.00 0.00 0.00 1.82
2993 3242 1.000896 CCGGCCCCAGAGACAATTT 60.001 57.895 0.00 0.00 0.00 1.82
2994 3243 1.789576 AACCGGCCCCAGAGACAATT 61.790 55.000 0.00 0.00 0.00 2.32
2995 3244 2.231380 AACCGGCCCCAGAGACAAT 61.231 57.895 0.00 0.00 0.00 2.71
2996 3245 2.852075 AACCGGCCCCAGAGACAA 60.852 61.111 0.00 0.00 0.00 3.18
2997 3246 3.636231 CAACCGGCCCCAGAGACA 61.636 66.667 0.00 0.00 0.00 3.41
2998 3247 4.410400 CCAACCGGCCCCAGAGAC 62.410 72.222 0.00 0.00 0.00 3.36
3023 3272 3.860930 TTTCCCTGGAGGCAACGGC 62.861 63.158 0.00 0.00 46.39 5.68
3024 3273 1.228429 TTTTCCCTGGAGGCAACGG 60.228 57.895 0.00 0.00 46.39 4.44
3025 3274 1.852067 CGTTTTCCCTGGAGGCAACG 61.852 60.000 10.88 10.88 42.22 4.10
3026 3275 0.536460 TCGTTTTCCCTGGAGGCAAC 60.536 55.000 0.00 0.00 34.51 4.17
3027 3276 0.404040 ATCGTTTTCCCTGGAGGCAA 59.596 50.000 0.00 0.00 34.51 4.52
3028 3277 1.281419 TATCGTTTTCCCTGGAGGCA 58.719 50.000 0.00 0.00 34.51 4.75
3029 3278 2.495084 GATATCGTTTTCCCTGGAGGC 58.505 52.381 0.00 0.00 34.51 4.70
3030 3279 2.548067 CCGATATCGTTTTCCCTGGAGG 60.548 54.545 22.81 0.00 37.74 4.30
3031 3280 2.755650 CCGATATCGTTTTCCCTGGAG 58.244 52.381 22.81 0.12 37.74 3.86
3032 3281 1.202604 GCCGATATCGTTTTCCCTGGA 60.203 52.381 22.81 0.00 37.74 3.86
3033 3282 1.226746 GCCGATATCGTTTTCCCTGG 58.773 55.000 22.81 6.16 37.74 4.45
3034 3283 0.859232 CGCCGATATCGTTTTCCCTG 59.141 55.000 22.81 6.85 37.74 4.45
3035 3284 0.462789 ACGCCGATATCGTTTTCCCT 59.537 50.000 22.81 0.00 36.72 4.20
3036 3285 0.857287 GACGCCGATATCGTTTTCCC 59.143 55.000 22.81 4.39 40.59 3.97
3037 3286 1.563111 TGACGCCGATATCGTTTTCC 58.437 50.000 22.81 9.07 40.59 3.13
3038 3287 3.854286 ATTGACGCCGATATCGTTTTC 57.146 42.857 22.81 15.15 40.59 2.29
3039 3288 3.869246 AGAATTGACGCCGATATCGTTTT 59.131 39.130 22.81 6.82 40.59 2.43
3040 3289 3.454375 AGAATTGACGCCGATATCGTTT 58.546 40.909 22.81 7.18 40.59 3.60
3041 3290 3.093717 AGAATTGACGCCGATATCGTT 57.906 42.857 22.81 9.25 40.59 3.85
3042 3291 2.795175 AGAATTGACGCCGATATCGT 57.205 45.000 22.81 6.00 43.49 3.73
3043 3292 3.049912 TGAAGAATTGACGCCGATATCG 58.950 45.455 18.31 18.31 39.44 2.92
3044 3293 4.686091 TCATGAAGAATTGACGCCGATATC 59.314 41.667 0.00 0.00 0.00 1.63
3045 3294 4.631131 TCATGAAGAATTGACGCCGATAT 58.369 39.130 0.00 0.00 0.00 1.63
3046 3295 4.053469 TCATGAAGAATTGACGCCGATA 57.947 40.909 0.00 0.00 0.00 2.92
3047 3296 2.905075 TCATGAAGAATTGACGCCGAT 58.095 42.857 0.00 0.00 0.00 4.18
3048 3297 2.378445 TCATGAAGAATTGACGCCGA 57.622 45.000 0.00 0.00 0.00 5.54
3049 3298 3.680642 ATTCATGAAGAATTGACGCCG 57.319 42.857 14.54 0.00 44.48 6.46
3050 3299 7.195646 TGAATTATTCATGAAGAATTGACGCC 58.804 34.615 34.13 23.12 44.48 5.68
3051 3300 8.526681 GTTGAATTATTCATGAAGAATTGACGC 58.473 33.333 34.13 23.40 44.48 5.19
3052 3301 9.558648 TGTTGAATTATTCATGAAGAATTGACG 57.441 29.630 34.13 0.00 44.48 4.35
3088 3337 9.135843 CGCCGAACTATATGATGAACTATTTAA 57.864 33.333 0.00 0.00 0.00 1.52
3089 3338 8.301720 ACGCCGAACTATATGATGAACTATTTA 58.698 33.333 0.00 0.00 0.00 1.40
3090 3339 7.116376 CACGCCGAACTATATGATGAACTATTT 59.884 37.037 0.00 0.00 0.00 1.40
3091 3340 6.586463 CACGCCGAACTATATGATGAACTATT 59.414 38.462 0.00 0.00 0.00 1.73
3092 3341 6.093404 CACGCCGAACTATATGATGAACTAT 58.907 40.000 0.00 0.00 0.00 2.12
3093 3342 5.009310 ACACGCCGAACTATATGATGAACTA 59.991 40.000 0.00 0.00 0.00 2.24
3094 3343 4.202121 ACACGCCGAACTATATGATGAACT 60.202 41.667 0.00 0.00 0.00 3.01
3095 3344 4.049186 ACACGCCGAACTATATGATGAAC 58.951 43.478 0.00 0.00 0.00 3.18
3096 3345 4.316205 ACACGCCGAACTATATGATGAA 57.684 40.909 0.00 0.00 0.00 2.57
3097 3346 4.316205 AACACGCCGAACTATATGATGA 57.684 40.909 0.00 0.00 0.00 2.92
3098 3347 5.403897 AAAACACGCCGAACTATATGATG 57.596 39.130 0.00 0.00 0.00 3.07
3099 3348 5.729454 GCAAAAACACGCCGAACTATATGAT 60.729 40.000 0.00 0.00 0.00 2.45
3100 3349 4.436317 GCAAAAACACGCCGAACTATATGA 60.436 41.667 0.00 0.00 0.00 2.15
3101 3350 3.783943 GCAAAAACACGCCGAACTATATG 59.216 43.478 0.00 0.00 0.00 1.78
3102 3351 3.181504 GGCAAAAACACGCCGAACTATAT 60.182 43.478 0.00 0.00 38.82 0.86
3103 3352 2.160022 GGCAAAAACACGCCGAACTATA 59.840 45.455 0.00 0.00 38.82 1.31
3104 3353 1.068816 GGCAAAAACACGCCGAACTAT 60.069 47.619 0.00 0.00 38.82 2.12
3105 3354 0.308376 GGCAAAAACACGCCGAACTA 59.692 50.000 0.00 0.00 38.82 2.24
3106 3355 1.065109 GGCAAAAACACGCCGAACT 59.935 52.632 0.00 0.00 38.82 3.01
3107 3356 3.608041 GGCAAAAACACGCCGAAC 58.392 55.556 0.00 0.00 38.82 3.95
3112 3361 3.282831 ACTATGAAGGCAAAAACACGC 57.717 42.857 0.00 0.00 0.00 5.34
3113 3362 4.854399 TGAACTATGAAGGCAAAAACACG 58.146 39.130 0.00 0.00 0.00 4.49
3114 3363 6.363357 GTGATGAACTATGAAGGCAAAAACAC 59.637 38.462 0.00 0.00 0.00 3.32
3115 3364 6.040278 TGTGATGAACTATGAAGGCAAAAACA 59.960 34.615 0.00 0.00 0.00 2.83
3116 3365 6.446318 TGTGATGAACTATGAAGGCAAAAAC 58.554 36.000 0.00 0.00 0.00 2.43
3117 3366 6.489700 TCTGTGATGAACTATGAAGGCAAAAA 59.510 34.615 0.00 0.00 0.00 1.94
3118 3367 6.003326 TCTGTGATGAACTATGAAGGCAAAA 58.997 36.000 0.00 0.00 0.00 2.44
3119 3368 5.559770 TCTGTGATGAACTATGAAGGCAAA 58.440 37.500 0.00 0.00 0.00 3.68
3120 3369 5.164620 TCTGTGATGAACTATGAAGGCAA 57.835 39.130 0.00 0.00 0.00 4.52
3121 3370 4.824479 TCTGTGATGAACTATGAAGGCA 57.176 40.909 0.00 0.00 0.00 4.75
3122 3371 6.500684 TTTTCTGTGATGAACTATGAAGGC 57.499 37.500 0.00 0.00 0.00 4.35
3123 3372 8.272545 TGATTTTCTGTGATGAACTATGAAGG 57.727 34.615 0.00 0.00 0.00 3.46
3209 3458 9.962759 GACGACGTGTAATGAAATATAAGTTTT 57.037 29.630 4.58 0.00 0.00 2.43
3210 3459 8.598075 GGACGACGTGTAATGAAATATAAGTTT 58.402 33.333 4.58 0.00 0.00 2.66
3211 3460 7.223387 GGGACGACGTGTAATGAAATATAAGTT 59.777 37.037 4.58 0.00 0.00 2.66
3212 3461 6.698766 GGGACGACGTGTAATGAAATATAAGT 59.301 38.462 4.58 0.00 0.00 2.24
3213 3462 6.145048 GGGGACGACGTGTAATGAAATATAAG 59.855 42.308 4.58 0.00 0.00 1.73
3214 3463 5.984926 GGGGACGACGTGTAATGAAATATAA 59.015 40.000 4.58 0.00 0.00 0.98
3215 3464 5.531634 GGGGACGACGTGTAATGAAATATA 58.468 41.667 4.58 0.00 0.00 0.86
3216 3465 4.374399 GGGGACGACGTGTAATGAAATAT 58.626 43.478 4.58 0.00 0.00 1.28
3217 3466 3.784338 GGGGACGACGTGTAATGAAATA 58.216 45.455 4.58 0.00 0.00 1.40
3218 3467 2.624636 GGGGACGACGTGTAATGAAAT 58.375 47.619 4.58 0.00 0.00 2.17
3219 3468 2.083167 GGGGACGACGTGTAATGAAA 57.917 50.000 4.58 0.00 0.00 2.69
3220 3469 3.818586 GGGGACGACGTGTAATGAA 57.181 52.632 4.58 0.00 0.00 2.57
3241 3490 2.815647 GAAGGCTCAAGGGCGACG 60.816 66.667 0.00 0.00 45.89 5.12
3242 3491 0.178068 TATGAAGGCTCAAGGGCGAC 59.822 55.000 0.00 0.00 45.89 5.19
3243 3492 0.465705 CTATGAAGGCTCAAGGGCGA 59.534 55.000 0.00 0.00 45.89 5.54
3244 3493 0.533755 CCTATGAAGGCTCAAGGGCG 60.534 60.000 0.00 0.00 45.89 6.13
3245 3494 3.410960 CCTATGAAGGCTCAAGGGC 57.589 57.895 0.00 0.00 35.64 5.19
3255 3504 1.281867 TGTGGGGAAGCACCTATGAAG 59.718 52.381 0.00 0.00 38.98 3.02
3256 3505 1.367346 TGTGGGGAAGCACCTATGAA 58.633 50.000 0.00 0.00 38.98 2.57
3257 3506 1.490490 GATGTGGGGAAGCACCTATGA 59.510 52.381 0.00 0.00 38.98 2.15
3258 3507 1.811558 CGATGTGGGGAAGCACCTATG 60.812 57.143 0.00 0.00 38.98 2.23
3259 3508 0.469917 CGATGTGGGGAAGCACCTAT 59.530 55.000 0.00 0.00 38.98 2.57
3260 3509 0.907704 ACGATGTGGGGAAGCACCTA 60.908 55.000 0.00 0.00 38.98 3.08
3261 3510 2.224159 ACGATGTGGGGAAGCACCT 61.224 57.895 0.00 0.00 38.98 4.00
3262 3511 2.040544 CACGATGTGGGGAAGCACC 61.041 63.158 0.00 0.00 38.08 5.01
3263 3512 0.889186 AACACGATGTGGGGAAGCAC 60.889 55.000 1.64 0.00 37.94 4.40
3264 3513 0.888736 CAACACGATGTGGGGAAGCA 60.889 55.000 1.64 0.00 37.94 3.91
3265 3514 1.875963 CAACACGATGTGGGGAAGC 59.124 57.895 1.64 0.00 37.94 3.86
3266 3515 0.888736 TGCAACACGATGTGGGGAAG 60.889 55.000 1.64 0.00 37.94 3.46
3267 3516 0.888736 CTGCAACACGATGTGGGGAA 60.889 55.000 1.64 0.00 37.94 3.97
3268 3517 1.302431 CTGCAACACGATGTGGGGA 60.302 57.895 1.64 0.00 37.94 4.81
3269 3518 1.172180 AACTGCAACACGATGTGGGG 61.172 55.000 1.64 0.00 37.94 4.96
3270 3519 0.238289 GAACTGCAACACGATGTGGG 59.762 55.000 1.64 0.00 37.94 4.61
3271 3520 1.229428 AGAACTGCAACACGATGTGG 58.771 50.000 1.64 0.00 37.94 4.17
3272 3521 2.287644 TCAAGAACTGCAACACGATGTG 59.712 45.455 0.00 0.00 39.75 3.21
3273 3522 2.560504 TCAAGAACTGCAACACGATGT 58.439 42.857 0.00 0.00 0.00 3.06
3274 3523 3.485633 CATCAAGAACTGCAACACGATG 58.514 45.455 0.00 0.00 0.00 3.84
3275 3524 2.095567 GCATCAAGAACTGCAACACGAT 60.096 45.455 0.00 0.00 38.28 3.73
3276 3525 1.264020 GCATCAAGAACTGCAACACGA 59.736 47.619 0.00 0.00 38.28 4.35
3277 3526 1.002576 TGCATCAAGAACTGCAACACG 60.003 47.619 0.00 0.00 44.87 4.49
3278 3527 2.780065 TGCATCAAGAACTGCAACAC 57.220 45.000 0.00 0.00 44.87 3.32
3283 3532 3.252701 CCCATAGATGCATCAAGAACTGC 59.747 47.826 27.81 0.00 38.87 4.40
3284 3533 4.458397 ACCCATAGATGCATCAAGAACTG 58.542 43.478 27.81 14.23 0.00 3.16
3285 3534 4.411540 AGACCCATAGATGCATCAAGAACT 59.588 41.667 27.81 14.31 0.00 3.01
3286 3535 4.712476 AGACCCATAGATGCATCAAGAAC 58.288 43.478 27.81 12.48 0.00 3.01
3287 3536 4.409901 TGAGACCCATAGATGCATCAAGAA 59.590 41.667 27.81 11.01 0.00 2.52
3288 3537 3.969312 TGAGACCCATAGATGCATCAAGA 59.031 43.478 27.81 13.31 0.00 3.02
3289 3538 4.040095 TCTGAGACCCATAGATGCATCAAG 59.960 45.833 27.81 16.13 0.00 3.02
3290 3539 3.969312 TCTGAGACCCATAGATGCATCAA 59.031 43.478 27.81 0.51 0.00 2.57
3291 3540 3.580039 TCTGAGACCCATAGATGCATCA 58.420 45.455 27.81 14.42 0.00 3.07
3292 3541 4.467082 AGATCTGAGACCCATAGATGCATC 59.533 45.833 19.37 19.37 31.67 3.91
3293 3542 4.427637 AGATCTGAGACCCATAGATGCAT 58.572 43.478 0.00 0.00 31.67 3.96
3294 3543 3.831333 GAGATCTGAGACCCATAGATGCA 59.169 47.826 0.00 0.00 31.67 3.96
3295 3544 3.195396 GGAGATCTGAGACCCATAGATGC 59.805 52.174 0.00 0.00 31.67 3.91
3296 3545 4.463539 CAGGAGATCTGAGACCCATAGATG 59.536 50.000 0.00 0.00 46.18 2.90
3297 3546 4.356492 TCAGGAGATCTGAGACCCATAGAT 59.644 45.833 0.00 0.00 46.71 1.98
3298 3547 3.724209 TCAGGAGATCTGAGACCCATAGA 59.276 47.826 0.00 0.00 46.71 1.98
3299 3548 4.111255 TCAGGAGATCTGAGACCCATAG 57.889 50.000 0.00 0.00 46.71 2.23
3309 3558 5.167121 CCTTAATATGCGTCAGGAGATCTG 58.833 45.833 0.00 0.00 44.68 2.90
3310 3559 4.835615 ACCTTAATATGCGTCAGGAGATCT 59.164 41.667 0.00 0.00 0.00 2.75
3311 3560 5.140747 ACCTTAATATGCGTCAGGAGATC 57.859 43.478 0.00 0.00 0.00 2.75
3312 3561 5.186021 CCTACCTTAATATGCGTCAGGAGAT 59.814 44.000 0.00 0.00 0.00 2.75
3313 3562 4.523173 CCTACCTTAATATGCGTCAGGAGA 59.477 45.833 0.00 0.00 0.00 3.71
3314 3563 4.810790 CCTACCTTAATATGCGTCAGGAG 58.189 47.826 0.00 0.00 0.00 3.69
3315 3564 3.006537 GCCTACCTTAATATGCGTCAGGA 59.993 47.826 0.00 0.00 0.00 3.86
3316 3565 3.244078 TGCCTACCTTAATATGCGTCAGG 60.244 47.826 0.00 0.00 0.00 3.86
3317 3566 3.990092 TGCCTACCTTAATATGCGTCAG 58.010 45.455 0.00 0.00 0.00 3.51
3318 3567 3.386726 ACTGCCTACCTTAATATGCGTCA 59.613 43.478 0.00 0.00 0.00 4.35
3319 3568 3.988517 GACTGCCTACCTTAATATGCGTC 59.011 47.826 0.00 0.00 0.00 5.19
3320 3569 3.244112 GGACTGCCTACCTTAATATGCGT 60.244 47.826 0.00 0.00 0.00 5.24
3321 3570 3.244078 TGGACTGCCTACCTTAATATGCG 60.244 47.826 0.00 0.00 34.31 4.73
3322 3571 4.319177 CTGGACTGCCTACCTTAATATGC 58.681 47.826 0.00 0.00 34.31 3.14
3323 3572 4.348168 ACCTGGACTGCCTACCTTAATATG 59.652 45.833 0.00 0.00 34.31 1.78
3324 3573 4.567857 ACCTGGACTGCCTACCTTAATAT 58.432 43.478 0.00 0.00 34.31 1.28
3325 3574 4.003584 ACCTGGACTGCCTACCTTAATA 57.996 45.455 0.00 0.00 34.31 0.98
3326 3575 2.846950 ACCTGGACTGCCTACCTTAAT 58.153 47.619 0.00 0.00 34.31 1.40
3327 3576 2.304761 CAACCTGGACTGCCTACCTTAA 59.695 50.000 0.00 0.00 34.31 1.85
3328 3577 1.906574 CAACCTGGACTGCCTACCTTA 59.093 52.381 0.00 0.00 34.31 2.69
3329 3578 0.693049 CAACCTGGACTGCCTACCTT 59.307 55.000 0.00 0.00 34.31 3.50
3330 3579 1.842381 GCAACCTGGACTGCCTACCT 61.842 60.000 0.00 0.00 32.18 3.08
3331 3580 1.377333 GCAACCTGGACTGCCTACC 60.377 63.158 0.00 0.00 32.18 3.18
3332 3581 4.303257 GCAACCTGGACTGCCTAC 57.697 61.111 0.00 0.00 32.18 3.18
3336 3585 3.248446 TACCGGCAACCTGGACTGC 62.248 63.158 0.00 14.49 37.86 4.40
3337 3586 1.079127 CTACCGGCAACCTGGACTG 60.079 63.158 0.00 0.00 0.00 3.51
3338 3587 2.955881 GCTACCGGCAACCTGGACT 61.956 63.158 0.00 0.00 41.35 3.85
3339 3588 2.436115 GCTACCGGCAACCTGGAC 60.436 66.667 0.00 0.00 41.35 4.02
3340 3589 2.606519 AGCTACCGGCAACCTGGA 60.607 61.111 0.00 0.00 44.79 3.86
3341 3590 2.436646 CAGCTACCGGCAACCTGG 60.437 66.667 0.00 0.00 44.79 4.45
3342 3591 2.436646 CCAGCTACCGGCAACCTG 60.437 66.667 0.00 2.94 44.79 4.00
3343 3592 2.928396 ACCAGCTACCGGCAACCT 60.928 61.111 0.00 0.00 44.79 3.50
3344 3593 2.536997 ATCACCAGCTACCGGCAACC 62.537 60.000 0.00 0.00 44.79 3.77
3345 3594 1.078426 ATCACCAGCTACCGGCAAC 60.078 57.895 0.00 0.00 44.79 4.17
3346 3595 1.220749 GATCACCAGCTACCGGCAA 59.779 57.895 0.00 0.00 44.79 4.52
3347 3596 1.549243 TTGATCACCAGCTACCGGCA 61.549 55.000 0.00 0.00 44.79 5.69
3348 3597 1.090052 GTTGATCACCAGCTACCGGC 61.090 60.000 0.00 0.00 42.19 6.13
3349 3598 0.537188 AGTTGATCACCAGCTACCGG 59.463 55.000 0.00 0.00 34.39 5.28
3350 3599 2.002586 CAAGTTGATCACCAGCTACCG 58.997 52.381 0.00 0.00 35.13 4.02
3351 3600 2.359900 CCAAGTTGATCACCAGCTACC 58.640 52.381 3.87 0.00 35.13 3.18
3352 3601 2.359900 CCCAAGTTGATCACCAGCTAC 58.640 52.381 3.87 0.00 35.13 3.58
3353 3602 1.340017 GCCCAAGTTGATCACCAGCTA 60.340 52.381 3.87 0.00 35.13 3.32
3354 3603 0.610232 GCCCAAGTTGATCACCAGCT 60.610 55.000 3.87 0.00 37.99 4.24
3355 3604 0.895100 TGCCCAAGTTGATCACCAGC 60.895 55.000 3.87 0.00 0.00 4.85
3356 3605 1.542915 CTTGCCCAAGTTGATCACCAG 59.457 52.381 3.87 0.00 33.87 4.00
3357 3606 1.144708 TCTTGCCCAAGTTGATCACCA 59.855 47.619 3.87 0.00 39.38 4.17
3358 3607 1.815003 CTCTTGCCCAAGTTGATCACC 59.185 52.381 3.87 0.00 39.38 4.02
3359 3608 1.815003 CCTCTTGCCCAAGTTGATCAC 59.185 52.381 3.87 0.00 39.38 3.06
3360 3609 1.704628 TCCTCTTGCCCAAGTTGATCA 59.295 47.619 3.87 0.00 39.38 2.92
3361 3610 2.496899 TCCTCTTGCCCAAGTTGATC 57.503 50.000 3.87 0.00 39.38 2.92
3362 3611 2.357569 GGATCCTCTTGCCCAAGTTGAT 60.358 50.000 3.84 10.15 39.38 2.57
3363 3612 1.004745 GGATCCTCTTGCCCAAGTTGA 59.995 52.381 3.84 6.37 39.38 3.18
3364 3613 1.005215 AGGATCCTCTTGCCCAAGTTG 59.995 52.381 9.02 0.00 39.38 3.16
3365 3614 1.005215 CAGGATCCTCTTGCCCAAGTT 59.995 52.381 12.69 0.00 39.38 2.66
3366 3615 0.622665 CAGGATCCTCTTGCCCAAGT 59.377 55.000 12.69 0.00 39.38 3.16
3367 3616 0.750911 GCAGGATCCTCTTGCCCAAG 60.751 60.000 12.69 0.00 42.78 3.61
3368 3617 1.304282 GCAGGATCCTCTTGCCCAA 59.696 57.895 12.69 0.00 42.78 4.12
3369 3618 3.001514 GCAGGATCCTCTTGCCCA 58.998 61.111 12.69 0.00 42.78 5.36
3373 3622 3.853355 ATTACAGGCAGGATCCTCTTG 57.147 47.619 12.69 15.24 33.25 3.02
3374 3623 4.288105 CCATATTACAGGCAGGATCCTCTT 59.712 45.833 12.69 0.34 33.25 2.85
3375 3624 3.843027 CCATATTACAGGCAGGATCCTCT 59.157 47.826 12.69 3.87 33.25 3.69
3376 3625 3.584848 ACCATATTACAGGCAGGATCCTC 59.415 47.826 12.69 6.98 33.25 3.71
3377 3626 3.602608 ACCATATTACAGGCAGGATCCT 58.397 45.455 9.02 9.02 36.78 3.24
3378 3627 4.042187 AGAACCATATTACAGGCAGGATCC 59.958 45.833 2.48 2.48 0.00 3.36
3379 3628 4.999950 CAGAACCATATTACAGGCAGGATC 59.000 45.833 0.00 0.00 0.00 3.36
3380 3629 4.413520 ACAGAACCATATTACAGGCAGGAT 59.586 41.667 0.00 0.00 0.00 3.24
3381 3630 3.780294 ACAGAACCATATTACAGGCAGGA 59.220 43.478 0.00 0.00 0.00 3.86
3382 3631 3.879295 CACAGAACCATATTACAGGCAGG 59.121 47.826 0.00 0.00 0.00 4.85
3383 3632 4.517285 ACACAGAACCATATTACAGGCAG 58.483 43.478 0.00 0.00 0.00 4.85
3384 3633 4.019771 TGACACAGAACCATATTACAGGCA 60.020 41.667 0.00 0.00 0.00 4.75
3385 3634 4.513442 TGACACAGAACCATATTACAGGC 58.487 43.478 0.00 0.00 0.00 4.85
3386 3635 6.429692 TGTTTGACACAGAACCATATTACAGG 59.570 38.462 0.00 0.00 0.00 4.00
3387 3636 7.433708 TGTTTGACACAGAACCATATTACAG 57.566 36.000 0.00 0.00 0.00 2.74
3403 3652 3.128589 GCAGAAAGAACCAGTGTTTGACA 59.871 43.478 0.00 0.00 33.97 3.58
3404 3653 3.378427 AGCAGAAAGAACCAGTGTTTGAC 59.622 43.478 0.00 0.00 33.97 3.18
3405 3654 3.620488 AGCAGAAAGAACCAGTGTTTGA 58.380 40.909 0.00 0.00 33.97 2.69
3406 3655 3.546815 CGAGCAGAAAGAACCAGTGTTTG 60.547 47.826 0.00 0.00 33.97 2.93
3407 3656 2.614057 CGAGCAGAAAGAACCAGTGTTT 59.386 45.455 0.00 0.00 33.97 2.83
3408 3657 2.213499 CGAGCAGAAAGAACCAGTGTT 58.787 47.619 0.00 0.00 37.42 3.32
3409 3658 1.871080 CGAGCAGAAAGAACCAGTGT 58.129 50.000 0.00 0.00 0.00 3.55
3410 3659 0.514691 GCGAGCAGAAAGAACCAGTG 59.485 55.000 0.00 0.00 0.00 3.66
3411 3660 0.394565 AGCGAGCAGAAAGAACCAGT 59.605 50.000 0.00 0.00 0.00 4.00
3412 3661 1.074752 GAGCGAGCAGAAAGAACCAG 58.925 55.000 0.00 0.00 0.00 4.00
3413 3662 0.681733 AGAGCGAGCAGAAAGAACCA 59.318 50.000 0.00 0.00 0.00 3.67
3414 3663 1.337260 TGAGAGCGAGCAGAAAGAACC 60.337 52.381 0.00 0.00 0.00 3.62
3415 3664 2.071688 TGAGAGCGAGCAGAAAGAAC 57.928 50.000 0.00 0.00 0.00 3.01
3416 3665 2.820059 TTGAGAGCGAGCAGAAAGAA 57.180 45.000 0.00 0.00 0.00 2.52
3417 3666 2.232208 TCATTGAGAGCGAGCAGAAAGA 59.768 45.455 0.00 0.00 0.00 2.52
3418 3667 2.614779 TCATTGAGAGCGAGCAGAAAG 58.385 47.619 0.00 0.00 0.00 2.62
3419 3668 2.749280 TCATTGAGAGCGAGCAGAAA 57.251 45.000 0.00 0.00 0.00 2.52
3420 3669 2.167075 TGATCATTGAGAGCGAGCAGAA 59.833 45.455 0.00 0.00 34.70 3.02
3421 3670 1.753073 TGATCATTGAGAGCGAGCAGA 59.247 47.619 0.00 0.00 34.70 4.26
3422 3671 2.220479 TGATCATTGAGAGCGAGCAG 57.780 50.000 0.00 0.00 34.70 4.24
3423 3672 2.159000 ACATGATCATTGAGAGCGAGCA 60.159 45.455 5.16 0.00 34.70 4.26
3424 3673 2.481854 ACATGATCATTGAGAGCGAGC 58.518 47.619 5.16 0.00 34.70 5.03
3425 3674 3.869832 ACAACATGATCATTGAGAGCGAG 59.130 43.478 14.50 0.00 34.70 5.03
3426 3675 3.619929 CACAACATGATCATTGAGAGCGA 59.380 43.478 14.50 0.00 34.70 4.93
3427 3676 3.787805 GCACAACATGATCATTGAGAGCG 60.788 47.826 14.50 1.32 34.70 5.03
3428 3677 3.128068 TGCACAACATGATCATTGAGAGC 59.872 43.478 14.50 12.40 0.00 4.09
3429 3678 4.957759 TGCACAACATGATCATTGAGAG 57.042 40.909 14.50 2.66 0.00 3.20
3430 3679 5.005094 TCTTGCACAACATGATCATTGAGA 58.995 37.500 14.50 5.41 0.00 3.27
3431 3680 5.305139 TCTTGCACAACATGATCATTGAG 57.695 39.130 14.50 8.62 0.00 3.02
3432 3681 5.416326 TCATCTTGCACAACATGATCATTGA 59.584 36.000 14.50 5.36 40.26 2.57
3433 3682 5.515270 GTCATCTTGCACAACATGATCATTG 59.485 40.000 5.16 6.48 40.26 2.82
3434 3683 5.184287 TGTCATCTTGCACAACATGATCATT 59.816 36.000 5.16 0.00 40.26 2.57
3435 3684 4.703093 TGTCATCTTGCACAACATGATCAT 59.297 37.500 1.18 1.18 40.26 2.45
3436 3685 4.073549 TGTCATCTTGCACAACATGATCA 58.926 39.130 0.00 0.00 40.26 2.92
3437 3686 4.083164 TGTGTCATCTTGCACAACATGATC 60.083 41.667 0.00 3.48 41.89 2.92
3438 3687 3.822167 TGTGTCATCTTGCACAACATGAT 59.178 39.130 0.00 0.00 41.89 2.45
3439 3688 3.212685 TGTGTCATCTTGCACAACATGA 58.787 40.909 0.00 0.00 41.89 3.07
3440 3689 3.629438 TGTGTCATCTTGCACAACATG 57.371 42.857 0.00 0.00 41.89 3.21
3445 3694 3.696281 CTTGTTGTGTCATCTTGCACA 57.304 42.857 0.00 0.00 42.95 4.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.