>input_sequence_50738
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-------------------------------------------------------------------ATGGGTCGCGTGA
TCCGCGCTCAGCGTAAGGGTGCGGGCTCCGTCTTCAAGTCCCACACCCACCACCGCAAGGGCCCCGCCCGGTTCAGGTCG
CTCGACTTCGGCGAGCGCAACGGGTACCTCAAGGGCGTCGTCACCGATGTCATCCACGACCCGGGGCGTGGTGCGCCGCT
GGCCAAGGTGACCTTCCGCCACCCGTTCAGGTACAAGCACCAGAAGGAGCTCTTCGTCGCCGCCGAGGGTATGTACACCG
GCCAGTTCGTCTACTGCGGACGCCGCGCCACCCTCTCCGTCGGCAACGTCCTCCCGCTCCGCTCCGTTCCTGAGGGAGGC
GTCATCTGCAACGTCGAGCACCACGTCGGCGACCGCGGTGTCTTCGCCAGGGCATCCGGTGACTACGCCATCGTCATCAG
CCACAACCCCGACAACGGCACCTCAAGGTACTGTTCCCTTTCCTCTCAACCCTCTCTCTAAAGTA---CATGACTATGGT
TAGATCTGACGTTCTCCTGCTAGTAACTGTCATTAGATTTGATGTATGTGATTCGCGGTAGGAAATGATTAAATGCTCAT
AGTTCGATCTGAATATATGTTCGTTCACTGCTTCTGATATGTGTGATTTAGATACTCTTTAATTGATTAGAAGCG-----
-----------------TCATATGTTTGTT------------AATCTATCAAAGACAAATTCGTAGGAACTCATTCTGTC
TTTGAGCCTTGAAATGTCTCCTGTTCATCTTATAATCTACAACTGTTACGATATGCTTGCTCTTCTGTTATCCTAGAACT
GTACACGATATGCTTTCTTCTGTTAACTTTGAACTTGGCATGACATGCTTTC----------------------------
---------TCTTCTGTTATCTT-GAACTGGACATGCATCTTGTAATTCTGTAAACATT--AAACCAGAGACATGCGATC
TCTAACTGTATTATCCTGCTTCTGTCTTCAGATTGGCCTACTGTGCTTT--AAGAATTATGATCACTAGCGTTTACTTAG
ATGTGGACCATTTCTTACTATCAGTT-CTTGTCAGTACAAGATCATAT------------------------GTGTATCT
TCGGTTATTTTGCCCGATGGCCTCATGCTTTTGATGAATTCTTCAGCTGTACAAATATCTGTACACAGTTACTCATTTTC
TGTTTATGTAGGATCAAGCTCCCCTCTGGTGCCAAGAAGATTGTCCCAAGCAGCTGCCGTGCCATGATTGGTCAGGTTGC
TGGTGGTGGCAGGACTGAGAAGCCAATGCTCAAGGCTGGTAACGCCTACCACAAGTACCGTGTGAAGAGGAACTCGTGGC
CTAAGGTGCGTGGTGTGGCCATGAACCCTGTGGAGCATCCCCACGGAGGAGGTAACCACCAGCATATTGGTCACGCTTCC
ACTGTCCGCCGTGATGCACCACCTGGCCAGAAGGTTGGTCTCATCGCTGCTAGGAGGACTGGTCGTCTCAGAGGCCAGGC
TGCCGCCTCTGCTGCCAAGGCCGACAAGGCCACTTAG-------------------------------------------
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>chr5B_1_TraesCS5B01G088900
AGACACACAGATCTTTTACGGGTTCTTAGAGAAATTCATTGGTTCCTTTGCCTATACCACTTCTTTGCCTTGGGTGACAT
GTGCTGTGAAGAATGATTTTAAGAACATTATCATAAATTAATAGTATATGGGATGGCGTTTATATAAAGAAAGAAAAT--
---GAAAATGTTCTTCTACTCCTGAGTTCAAATGAGCTCGGACCTCGGATGAACAATGAAATCGAATGAAAATAAAAAAA
AAATCTGATTATTTTGTGTGGTAACCTTTGACAAAAAATTTCTATGCTTGAATTTTTTTTGCCACGAAATGACATTTGTG
GAAGTCATGGCAAAAAATAAAACAAAATCAGTACTCCAAAATGATTCCAAAAATAGCATTTTTGGAGTATCAACTTTATA
TTTTTTT-CACGACTTCCAGAAATTTTCATTCATGATAAATTTTTGTACGCACATAG-ACATTTGTCAAAGGATATCACA
AAAAATATCAGAATTTTTAATCCTTTTAACTATATTTTTTGATTTCACTGTTCATCATAAGCATTTGACCTCGGGTGCAA
ATACTTCCCGTCCAAATA-------------------------------------------CTTCTCGTCCCGTGGCACA
AAAAAAGGCGCGCTCCTGCTCGCTCACCGCTCCCAACACCACAACCGTCTTCGGGG------------------------
TTTGATCACTTCGAACGGGCGGAGCCAGAATGATAT---------TCGGCCTGTTACCAGCTCATTTCTCATTCCCACA-
-------ACACTAACAAGCTGGCCCATGACAGCCCAGTT----------------AGTCCGTCACAGCACGGCCCGGCGA
CGCTATTTCACTGACGTTGCGGTCCTACTGCGTGACCAAACGAATCCAACGGCCCAGACGCGCCCCCATCCCCCATCCCG
ACCGTCCACCCTATAGGGTAATCAAACCACAAAGCCCGTGCCGCACCCTATATATTGCTCCCTCTTCCTCCTCGTCGAAC
CCTAGCCCAGCTGCCCACCCATTCCCCTCACCGCCGCCGCCGCCACTGCGCCGCTGCCGCCGCCGAGATGGGTCGCGTGA
TCCGCGCTCAGCGTAAGGGTGCGGGCTCCGTCTTCAAGTCCCACACCCACCACCGCAAGGGCCCCGCCCGGTTCAGGTCG
CTCGACTTCGGCGAGCGCAACGGGTACCTCAAGGGCGTCGTCACCGATGTCATCCACGACCCGGGGCGTGGTGCGCCGCT
GGCCAAGGTGACCTTCCGCCACCCGTTCAGGTACAAGCACCAGAAGGAGCTCTTCGTCGCCGCCGAGGGTATGTACACCG
GCCAGTTCGTCTACTGCGGACGCCGCGCCACCCTCTCCGTCGGCAACGTCCTCCCGCTCCGCTCCGTTCCTGAGGGAGGC
GTCATCTGCAACGTCGAGCACCACGTCGGCGACCGCGGTGTCTTCGCCAGGGCATCCGGTGACTACGCCATCGTCATCAG
CCACAACCCCGACAACGGCACCTCAAGGTACTGTTCCCTTTCCTCTCAACCCTCTCTCTAAAGTA---CATGACTATGGT
TAGATCTGACGTTCTCCTGCTAGTAACTGTCATTAGATTTGATGTATGTGATTCGCGGTAGGAAATGATTAAATGCTCAT
AGTTCGATCTGAATATATGTTCGTTCACTGCTTCTGATATGTGTGATTTAGATACTCTTTAATTGATTAGAAGCG-----
-----------------TCATATGTTTGTT------------AATCTATCAAAGACAAATTCGTAGGAACTCATTCTGTC
TTTGAGCCTTGAAATGTCTCCTGTTCATCTTATAATCTACAACTGTTACGATATGCTTGCTCTTCTGTTATCCTAGAACT
GTACACGATATGCTTTCTTCTGTTAACTTTGAACTTGGCATGACATGCTTTC----------------------------
---------TCTTCTGTTATCTT-GAACTGGACATGCATCTTGTAATTCTGTAAACATT--AAACCAGAGACATGCGATC
TCTAACTGTATTATCCTGCTTCTGTCTTCAGATTGGCCTACTGTGCTTT--AAGAATTATGATCACTAGCGTTTACTTAG
ATGTGGACCATTTCTTACTATCAGTT-CTTGTCAGTACAAGATCATAT------------------------GTGTATCT
TCGGTTATTTTGCCCGATGGCCTCATGCTTTTGATGAATTCTTCAGCTGTACAAATATCTGTACACAGTTACTCATTTTC
TGTTTATGTAGGATCAAGCTCCCCTCTGGTGCCAAGAAGATTGTCCCAAGCAGCTGCCGTGCCATGATTGGTCAGGTTGC
TGGTGGTGGCAGGACTGAGAAGCCAATGCTCAAGGCTGGTAACGCCTACCACAAGTACCGTGTGAAGAGGAACTCGTGGC
CTAAGGTGCGTGGTGTGGCCATGAACCCTGTGGAGCATCCCCACGGAGGAGGTAACCACCAGCATATTGGTCACGCTTCC
ACTGTCCGCCGTGATGCACCACCTGGCCAGAAGGTTGGTCTCATCGCTGCTAGGAGGACTGGTCGTCTCAGAGGCCAGGC
TGCCGCCTCTGCTGCCAAGGCCGACAAGGCCACTTAGAGCTATCATTGCTGTTTATCTATGGTTGCTGCCTCTAGATTAC
CTGTCAAGGACATGTATTGCAGTATGGATGTCGTTTTTGCTCGGTACTTTGGTAACCTGGTGATGTTTGTTATCAGTTTT
CGCTGTCGTGGTCTGGATTCTTCGGTCCACATAAAGAAGATTAT---GCTTGGATATTTGGTTGTCCAGTTACTTGAGTT
AGCCCCTGGTGCTTATTTTTGTTTATTGTTTCTGTTTTAGTTTAGCTCTATTGGTGGATCTATAAAC------TTGTTTG
GTTGAATCAAACGTATAGCAGCAG---TATGTTTGCTTCTATCTGATGTTTCTTTGGAATTTTAACCTTAGA--------
----------------GTTTATATATAAATACCTGCTTTTTACATCACTTGTCCAAAATCACCCGTCCAACAAGCTGAGC
TAAATGTAAATTTGTTCGGAGGACGTGGTGAGGTAAAATGGCTGCCCACCG-GCGAACGCTAACTGCCTCTAGGTACTTA
GAGCATCTCCAGCCGTTGGCCCGCCTGGGGTCGAGGAGGCAAAATTGTCTCTGGGGCCGGTTGGCCACCCAGCCGTTGCC
TCCAGGGAAAACGATATCGGCGTCAATTCTTCATGAATAATTCAACAAATAGAAAATTAAATAGTTCATCATATAGTTCG
GCGTGTTTTTGCCTTCATAGTTCATCACAGAAAATCAATAAAAATCAAATAGTTCAATAACAAATAGTTCAATACAAATT
ATATAATTTAACAAATAAAAACTTATATTTCATTACACGTCGTCCCCGGCGTCGCCCTTGAGCCTTCATAGGTGCTTCCC
CACATCGTGTTGCAGTTCTTGATGCATCTATGGGTCTCAGATCTCCTGACGCATATTAAGGTAGGCAGTCCAGGTTGCCG
GTAGCTGGTGATCAACTTGGGCAAGAGGATCCTGCCTGTAATATGGTTCTGTGTCAAACACTGGTTCTTTCTGCTCGCTC
TCAATGATCATGTTGTGCAAGATGACACAACAAG
>chr5A_62
-------------------------------------------------------------TCTTTGCCTTGGGTGACAT
GTGCTGTGAAGAATGATCATAAGAACATTATCATAAATTAATAGTATATGGGGTAGTCTTTATATAAAGAAAGAAAGAAA
ATCGAAAGTGTTTTTTTGCTCCCGAGCTTAAATGAACTG-------GGATGAACAGTAAAATCAAAAGAAAAAAAATGAT
TTC---------TTTTTGTGGTAACCTTTAACAAATGTTTTCTATGCTTGAAA--TTTTTGTCACGAAATGACTTTCGTG
GAAGTCATGGCAAAAAAATAATTAAAAA-AGTACTCCAAAATGCTTTCAAAAATAGCATTTTTGAAGTATTGATTTTGTC
TTTTTTGCCACGACTTCCAGAAATGTTCATTCATGATAATTTTTTGCAAGCACATAGTACATTTGTCAAAGGTTACAAAA
AAATCGGA---------TAATTTATTTTACTATCTTTCCTGGTTTTACTGTTCACAAAAAGCATTTGAGCTCGTGTGCAA
ATTCTTCACGTCCAAAGAAAATTATGTTCTTCAACATCTGCCTTCTCCATTGGTCGACCTTCTTCTCGTCCCGTAGCACA
AAAA--GGCGCGCTCCAGCTCGCTCGCCGCTCCCAACACCACAACTTTTGTTTTTTTGAGAATCCCCAACACCACAACTT
TTTGATCACTTCAAACGGGCGGAGCCAGAATGGTACAAAGAGAACTCGGCCTATTACCAGCCCATTTCTCATTCCCACTA
GTCCACTACACTAACAAACCGGCCCATTACAGCCCAGTCCACTCCTCATTTCGTCAGTCCCTCACAGCACGGCCCGGCGA
CGCTATGTCACTGACGTTGTGGTCCTACTGCCTGCCCAAACGAATCCAACGGCCGAGACGCGCCCC-ATCCTCCATCCCG
ACCGTCCACCCTATAGGGTAATCAAACCACAAAGCCCGTGCCGCACCCTATATATTGCTCCCTCTTCCTCCTGGTCGAAC
CCTAGCCCAGCTGCCCACCCATTCCCCTC---GCCGCCGCCGCCACTCCGCCGCCGCCGCCGCCGAGATGGGTCGCGTGA
TCCGCGCTCAGCGTAAGGGTGCGGGCTCCGTCTTCAAGTCCCACACCCACCACCGCAAGGGCCCCGCCCGCTTCAGGTCG
CTCGACTTCGGCGAGCGCAACGGGTACCTCAAGGGCGTCGTCACCGATGTCATCCACGACCCGGGGCGTGGTGCGCCGCT
GGCCAAGGTGACCTTCCGCCACCCGTTCAGGTACAAGCACCAGAAGGAGCTCTTCGTCGCCGCCGAGGGTATGTACACCG
GCCAGTTCGTCTACTGCGGACGCCGCGCCACCCTCTCCGTTGGTAACGTCCTCCCGCTCCGCTCCGTGCCTGAGGGAGGC
GTCATCTGCAACGTCGAGCACCACGTCGGCGACCGTGGTGTCTTCGCCAGGGCCTCCGGTGACTACGCCATCGTCATCAG
CCACAACCCTGACAACGGCACCTCAAGGTACTGTTACCTTTCCTCTCACCCCTCTATCTAAAGTA---CATGACCATGGT
TAGAGCTGACGTTCTCCTGGTAGTAACTGTCACTAGATTTTATGTATGTGATTTGCTGTAGGAAATGATTAAATGCTCAT
AGTTTGATCTGAATATATGTTCGTTCACTGCTTCTC--ATGGGTGATTTAGATGCTCTTTAATTGATTAAAGATTGGAAA
CCTTAAATGTGTGTGCTTCATATGCTTGTT------------AATCTATCAAAGACAAATTCTTAGGAACTCATTCTGTC
GTTGAGCCTTGAGATGTCTCCTGTTCATTGTATAATCTGCAGCTGTTACCATATGCTTGCTCTTCTGTTAACCTAGAATT
GTACATGATATGCTTTCTTCTGTTATCCTTGAACTTGTCATGATATGCTTTA----------------------------
---------TCTTCTGTTATCTT-GTT-----------------------------------------AGACATGTGATC
TCTAACTATATTATCCTGCTTCTGTCTTCAGATTGGCTTACCGTGCTTT--AAGAATTATGATCACTAGCGTTTACATAT
ACGTGGACCATTTCTTGTTATCATTTCCTTGTCAGTACGAGATCATAT------------------------GTGTATCT
TTGGTTATGTTGCCTGATGGACTGATGCTTTTGATGAATTCTTCTGCTGTACAAATATTTAGACACAGTTACTCATGTTC
TGTTTATGCAGGATCAAGCTCCCCTCTGGTGCCAAGAAGATTGTCCCAAGCAGCTGCCGTGCCATGATTGGTCAGGTTGC
TGGTGGTGGCAGGACTGAGAAGCCAATGCTCAAGGCTGGTAACGCCTACCACAAGTACCGCGTGAAGAGGAACTCCTGGC
CTAAGGTGCGTGGTGTGGCCATGAACCCTGTGGAGCATCCCCACGGAGGAGGTAACCACCAGCATATTGGTCACGCTTCC
ACTGTCCGCCGTGATGCACCACCTGGCCAGAAGGTTGGTCTCATCGCTGCCAGGAGGACTGGTCGTCTCAGAGGCCAGGC
TGCCGCCTCTGCTGCCAAGGCCGACAAGGCCACTTAGAGCTATCGTTGCTGTTTATCTATGTTTGCTGCCTCTAGATTAC
CCGTCAAGGACATGTATTGCAATATGGATGTCGTTTTTGCTCGGTACTTTGGTAACGTGGTGATATTTGTTATCAGTTTT
CGCTGTCGTGGTCTGGATTCGTCGGTCCACATAAAGAAGATTGT---GCTTGGATATTTGTTTGTCGAGTTGCTTGAGTT
TGCCCCTGGCGCATATTTTTGTTTATTGTTTCTGTTTTAGTTTAGCTCTATTGCTGGAGCTCTAAACGTAGTTTTGTTTG
GTCGAGTCAAACAGGAGG----------ATGTTTGCTATTATCTCGTGGTTCTTTGGAATTTTAACCCAATGGGT-----
-------------GATGCATATATAAATATACCTGCTTTTTACATCGCTTACCCAAAATCACCCGTCCAGCAAACTGAGG
TAAATGTAAATTTGTTCTGAGAACGTGGTGATGTAAAACGGCCGCCCACCGTGCGAACGCCAACTGCCTCTATGTACTTA
GAGCAT--------------------------------------------------------------------------
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>chr5D_635
CCC-----------------------------------------------------------------------------
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-----------------------------------------------TCTTCGGTG------------------------
TTAGATCACTTCAAACAGGCGGAGCCAGAATGGTACAAAGAGAACTCGGCCTACTACCAGCCCATTTCTCATTCCCAC--
------TACACTAACAAACCGGCCCATGACAGCCCAGTCCACTCCTCATTTCGTCAGTCCGTCACAGCACGGCCCGGCGA
CGCTAT-TCACTGACGTTGCGGTCCTACTGCCTGCCCAAACGAATCCAACGGCCCAGACGCGCCCCCATCCGCCATCCCG
ACCGTCCACCCTATGGGGTAATCAAACCACAAAGCCCGTGCCTCACCCTATATATTGCTCCCTCTTCCTCCTCGTCGAAC
CCTAGCCCAGCTGCCCATCCATTCCCCTC---GCCGCCGCCGCCACTCCGCCGCTGCCGCCGCCGAGATGGGTCGCGTGA
TCCGCGCTCAGCGTAAGGGTGCGGGCTCCGTCTTCAAGTCCCACACCCACCACCGCAAGGGCCCCGCCCGGTTCAGGTCG
CTCGACTTCGGCGAGCGCAACGGGTACCTCAAGGGCGTCGTCACCGATGTCATCCACGACCCGGGGCGTGGTGCGCCGCT
GGCCAAGGTGACCTTCCGCCACCCGTTCAGGTACAAGCACCAGAAGGAGCTCTTCGTCGCCGCCGAGGGTATGTACACCG
GCCAGTTCGTCTACTGCGGACGCCGAGCCACCCTCTCCGTCGGCAACGTCCTCCCGCTCCGCTCCGTCCCTGAGGGAGGC
GTCATCTGCAACGTCGAGCACCACGTCGGCGACCGTGGTGTCTTCGCCAGGGCCTCCGGTGACTACGCCATCGTCATCAG
CCACAACCCCGACAACGGCACCTCAAGGTACTGTTCCCTTTCCTCTCAACCCTCTCTCTAAAGTA---CATTACTATGGT
TAGATCTGACGTTCTCCTGCTAGTAACTGTCATTAGATTTGGTGTATGTGATTCGCTGAAGGAATTGATTAAATGCTCAT
AGTTCGATCTGAGTATATGTTCGTTCACTGCTTCTGATATGTGTGATTTAGATGCTCTTTAATTGATTAAGGATTGGAAA
CCTTAAATGTGTGTGT------------TT------------CATCTATCAAAGACAAATTCTTAGGAACTCATTCTGTC
GTTGAGCCTTGAGATGTCTCCTGTTCATCGTATAATCTACAACTGTTACGATATGCTTGCTCTTCTGTTATCTTAGAACT
GTACACGATATGCTTTCTTCTGTTAACTTTGAACTTGGCATGACATGCTTTC----------------------------
---------TCTTCTGTTATCCTAGAACTGGACATGCATCTTGTAATTCTGTAAACATT--AAACCAGAGACATGTGATC
TCTAACTGTATTATCCTGCTTCTGTCTTCAGATTGGCCTACTGTGCTTT--AAG-ATTATGATCACTAGCGTTTACTTAG
ATGTGGACCATTTCTTACTATCAGTT-CTTGTCAGTACAAGATCATAT------------------------GTGTATTT
TTGGTTATTTTGCCTGATGGCCTGATGCTTTTGATGAATTCTTCAGCTGTACAAATATTTAGACACAGTTACTCATGTTC
TGTTTATGCAGGATCAAGCTCCCCTCTGGTGCCAAGAAGATTGTCCCAAGCAGCTGCCGTGCCATGATTGGTCAGGTTGC
TGGTGGTGGCAGGACTGAGAAGCCAATGCTCAAGGCTGGTAACGCCTACCACAAGTACCGTGTGAAGAGGAACTCCTGGC
CTAAGGTGCGTGGTGTGGCCATGAACCCTGTGGAGCATCCCCACGGAGGAGGTAACCACCAGCATATTGGTCACGCTTCC
ACTGTCCGCCGTGATGCACCACCTGGCCAGAAGGTTGGTCTCATTGCTGCCAGGAGGACTGGTCGTCTCAGAGGCCAGGC
TGCTGCCTCTGCTGCCAAGGCCGACAAGGCCACTTAGAGCTATCGTTGCTGTTTATCTATGTTTGCTGCCTCTAGATTAC
CCGTCAAGGACATGTATTGCAGTATGGATGTCGTTTTTGCTC---ACTTTGGTAACCTGGTGATGTTTGTTATCAGTTTT
CGCTGTCGTGGTCTGGATTCTTCGGTCCACATAAAGAAGATTAT---GCATGGATATTTGTTTGTCGAGTTGCTTGAGTT
AGCCCCTGGCGCTTATTTTTGTTTACTGTTT------TAGTTTAGCTATATTGCTGGATCTCTAAACGTAGTTTTGTTTG
GTCGAATCAAACAGTT-------G---TATGTTTGCTTCTATCTCGTGGTTCTTTGGAATTTTAACCTTAGAGCCTCTCC
AATAGGTGAGTTAGATGTATATATAAAAATGCCTGATTTTTAGATCGCTTACCCAAAATCACCCGTCCAACAAACTGAGG
TAAATGTAAATTTGATCTGAGAACGTGGTGATGTAAAACGGCCGCCCACCGTGAACGC----------------------
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>chr4B_899
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---------------------------------------------CCCTATATATTGCTCCCTCTTTTCCCTCCTCGAAC
CCTAGCCCAGCTGCCCACCCATTCCCCTC---ACCGCCGCCGCCACTCCGCCTCTGCCGCCGCCGAGATGGGTCGCGTGA
TCCGCGCTCAGCGTAAGGGTGCGGGCTCCGTCTTCAAGTCCCACACCCACCACCGCAAGGGCCCCGCCCGGTTCAGGTCG
CTCGACTTCGGCGAGCGCAACGGGTACCTCAAGGGCGTCGTCACCGATGTCATCCACGACCCGGGGCGTGGTGCGCCGCT
GGCCAAGGTGACCTTCCGCCACCCGTTCAGGTACAAGCACCAGAAGGAGCTCTTCGTCGCCGCCGAGGGTATGTACACCG
GCCAGTTCGTCTACTGCGGACGCCGCGCCACGCTCTCCGTCGGCAACGTCCTCCCGCTCCGCTCCGTGCCTGAGGGAGGC
GTCATCTGCAACGTCGAGCACCACGTCGGCGACCGTGGTGTTTTCGCCAGGGCCTCCGGTGACTACGCCATCGTCATCAG
CCACAACCCCGACAACGGTACCTCAAGGTACTGTTCTTGTTCCTCTAATCCCTCATTATAAATT--TATATGCCTATGGT
TA--------GTTCTCCTGATAGTAACTGTTATTCGATTTGCTTTATGTGATTCGCGGTGGGAAATGATGAAATGCTCAT
AGTTCGATCTGAATATATGTTCGTCCACTGCTTCTGATATGCGTGATTTAGATGCTCTTTAATTTATAAAAGATTGGAAA
CCTTTAATGTGCGTGC------------TTTACATGTTTGTTAATTTCTCAAAGACCAATTCTTAGATACGCATTCTGCC
GTTGAGCCTTGAGATGTTTTCTGTTCATCGTATAATCTGCAACAGTTAGGATATGCTTGCTCTTCTGTTATCCTAGAACT
GGACATGAT-----------------------------------ATGCTTGC----------------------------
---------TCTTCTGTTATCCTAGAACTGCACATGCATCTTAGAAGACTGTAAACCTTAAAAACCAGAGACATGTGATC
TCTAACTATGTTGTCCTGCTTCTGTCTTCAGATTGACCTAC----------AATAATTATGATTGCTAGCGTTTGCATAT
ACAAGGGCCATTTCTTATTATCAGTT-CTTGTCAGTACAAGATCCTACATTTTAATGAAATAGATATGATTGGTGTATCT
TTGTTTATGTTGCCTGATGGCCTGATTCTTTTGATGAATTCCTCAGCTGCACAAATATTAAGACGCA-CTACTCATGTTG
TGTTTATGCAGGATCAAGCTCCCCTCTGGCGCCAAGAAGATCGTCCCAAGCAGCTGCCGTGCCATGATTGGTCAGGTTGC
TGGTGGTGGCAGGACTGAGAAGCCAATGCTGAAGGCTGGTAACGCCTACCACAAGTACCGCGTGAAGAGGAACTCCTGGC
CTAAGGTGCGTGGTGTGGCCATGAACCCTGTTGAGCATCCCCACGGAGGAGGTAACCACCAGCATATTGGTCACGCCTCC
ACTGTCCGCCGTGATGCACCACCTGGCCAGAAGGTTGGTCTCATCGCTGCCAGGAGGACTGGTCGTCTCAGAGGCCAGGC
CGCCGCCTCTGCTGCCAAGGCCGACAAGGCCACTTAGAGTTATCGTTGCTGTTTATCAATGTTTGCTAGCTCTAGATTAC
CCGTCAAGGACATGTATTGCAGTAAGGATGTTGTTTTTGCTCGGTACTTTGGTAACCTGGTGATATTTGTTGTCAGTTTT
TGCTGTCGTGGTCTGGATTCTTCAGTCCACATAAAGAAGATTATTATGCTTGGGTATTTGTCTGTCGATTTTCTTGAGTT
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>chr4D_901
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-----------------------------------------------CTATATATTGCTCCCTCTTCTCCCTCCTCGAAC
CCTAGCCCAGCTGCCCACCCATTCCCCTC---ACGGCCGCCGCCACTCCGCCTCTGCCGCCGCCGAGATGGGTCGCGTGA
TCCGCGCTCAGCGTAAGGGTGCGGGCTCCGTCTTCAAGTCCCACACCCACCACCGCAAGGGCCCCGCCCGGTTCAGGTCG
CTCGACTTCGGCGAGCGCAACGGGTACCTCAAGGGCGTCGTCACAGATGTCATCCACGACCCGGGGCGTGGTGCGCCGCT
GGCCAAGGTGACCTTCCGCCACCCGTTCAGGTACAAGCACCAGAAGGAGCTCTTCGTCGCCGCCGAGGGTATGTACACCG
GCCAGTTCGTCTACTGCGGACGCCGCGCCACGCTCTCCGTCGGCAACGTCCTCCCGCTCCGCTCCGTGCCTGAGGGAGGC
GTCATCTGCAACGTCGAGCACCACGTCGGCGACCGTGGTGTCTTCGCCAGGGCCTCCGGTGACTACGCCATCGTCATCAG
CCACAACCCCGACAACGGCACCTCAAGGTACTGTTCCTTTTCCTCTCAATCCTCTTTATAAATTAGTATATGCCTATGGT
TAGTTCTGACGTTCTCCTGATAGTAACTGTTACTGGATTTGCTTTATGTGATTCGCGGTGACAAATGATGAAATGCTCAT
AGTTCGATCTGAATGTATGTTCGTTCACTGCTTCTGATATGCGTGATTTAGATGCCCTTTAATTGATTAAAGATTGGAAA
CCTTCAATGTGCGTGC------------TTTACATGTTTGTTAATTTCTCAAAGACCAATTCTTAGATACGCATTCTGTC
GTTGAGCCTTGAGATGTTTTCTGTTC-TTGTATAATCTGCAACAGTTACGATATGCGTGCTCTTCTGTTATCCTAGAACT
GGACATGAT-----------------------------------ATGCCTGCTCTTCTGTTTTCCTAGAACTGGACATGA
TATGCTTGCTCTTCTGTTATCCTATAACTGCACATGCATCTTAGAAGACAGTAAACCTT--AAACCAGAGACATGTGATC
TCTAACTATGTTGTCCTGCTTCTGTCTTCAGATTGACCTACCCTGCCTTCAA-GAATTATGATTGCTAGCGTTTGCATAT
ACAAGGGCCATTTCTTATTATCATTG-CTCGCCAGTACAAGATCCTACATGTTAATGGAATAGATATGATTGGCGTATCT
TTGTTTATGTTTCCTGATGGCCTGATTCTTTTGATGAATTTTTCAGCTGCACAAATATTAAGACGCA-TTATTCATGTTG
TGTTTATGCAGGATCAAGCTCCCCTCCGGCGCCAAGAAGATCGTCCCAAGCAGCTGCCGTGCCATGATTGGTCAGGTTGC
TGGTGGTGGCAGGACTGAGAAGCCAATGCTGAAGGCTGGTAACGCCTACCACAAGTACCGCGTGAAGAGGAACTCCTGGC
CTAAGGTGCGTGGTGTGGCCATGAACCCTGTTGAGCATCCCCACGGAGGAGGTAACCACCAGCATATTGGTCACGCCTCC
ACTGTCCGCCGTGATGCACCACCTGGCCAGAAGGTTGGTCTCATCGCTGCCAGGAGGACTGGTCGTCTCAGAGGCCAGGC
CGCCGCCTCTGCTGCCAAGGCCGACAAGGCCACTTAGAGTTATCGTTGCTGTTTATCTATGTTTGCTAGCTCTAGATTAC
CCGTCAAGGACATGTATTGCAGTAAGGATGTTGTTTTTGCTCGGTACTTTGGTAACCTGGTGATATTTCTTATCAGTTTT
TGCTGTCGTGGTCTGGATTCTTCAGTCCACATAAGGAAGATTATTATGCTTGGATATTTGTATGTCGATTTTCTTGAGTT
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>chr4A_901
--------------------------------------------------------------------------------
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-----------------------------------------------CTATATATTGCTCCCTCTTCTCCGTCCTCGAAC
CCTAGCCCAGCTGCCCACCCATTCCCCTC---ACCGCCGCCGCCACTCCGCCTCTGCCGCCGCCGAGATGGGTCGCGTGA
TCCGCGCTCAGCGTAAGGGTGCGGGCTCCGTCTTCAAGTCCCACACCCACCACCGCAAGGGCCCCGCCCGGTTCAGGTCG
CTCGACTTCGGCGAGCGCAACGGGTACCTCAAGGGCGTCGTCACCGATGTCATCCACGACCCGGGGCGTGGTGCGCCGCT
GGCCAAGGTGACCTTCCGCCACCCGTTCAGGTACAAGCACCAGAAGGAGCTCTTCGTCGCCGCCGAGGGTATGTACACCG
GCCAGTTCGTCTACTGCGGACGCCGCGCCACGCTCTCCGTCGGCAACGTCCTCCCGCTCCGCTCCGTGCCTGAGGGAGGC
GTCATCTGCAACGTCGAGCACCACGTCGGCGACCGTGGTGTCTTCGCCAGGGCCTCGGGTGACTACGCCATCGTCATCAG
CCACAACCCCGACAACGGCACCTCAAGGTACTGTTCCTTGTCCTCTCACCCCTCTTTATAAATTA---TATGCCTATGGT
TAG--------TTCTCCTGATAGTAGCTGTTATTGGATTTGCTTCATGTGATTCGCGGTGGGAAATGATGAAATGCTCAT
AGTTCGATCTGAATATATGTTCGTCCACTGCTTCTGATATGCGTGATTTAGATGCTCTTTAATTGATTAAAGATTGGAAA
CCTTTAATGTGCGTGC------------TTTACATGTTTGTTAATTTCTCAAAGACCAATTCTTAGATACGCATTCTGTG
GTTGAGCCTTGAGATGTTTTCTGTTCATTGTATAATCTGCAACAGTTATGATATGCTTGCTCTTCTGTTATCCTGGAACT
GGACATGAT-----------------------------------ATGCTTGC----------------------------
---------TCTTCTGTTATCCTAGAACTGCACATGCATCTTAGAAGACTTTAAACCTT--AAACCAGAGACATGCGATC
CCTAACTATTTTATCCTGCTTCTGTCTTCAGATTGACCTACCCTGCCTTCAAACAATTATGATTGTTAGCGTTTGCATAT
ACAAGGGCCATTTCTTATTATCAGTT-CTTGTCAGTACAATATCCTACATGTTAATGGAATAGATATGATTGGTGTATCT
TTGTTTATGTTGCCGGATGGCCTGATTCTTTTGATGAATGCTTCAGCTGCACAAATATTAAGACGCA-TTACTCATGTTG
TGTTTATGCAGGATCAAGCTCCCCTCTGGCGCTAAGAAGATCGTCCCAAGCAGCTGTCGTGCCATGATTGGTCAGGTTGC
TGGTGGTGGCAGGACTGAGAAGCCAATGCTGAAGGCTGGTAATGCCTACCACAAGTACCGTGTGAAGAGGAACTCCTGGC
CTAAGGTGCGTGGTGTGGCCATGAACCCTGTTGAGCATCCCCACGGAGGAGGTAACCACCAGCATATTGGTCACGCCTCC
ACTGTCCGCCGTGATGCACCACCTGGCCAGAAGGTTGGTCTCATCGCTGCCAGGAGGACTGGTCGTCTCAGAGGCCAGGC
TGCCGCCTCTGCTGCCAAGGCTGACAAGGCCACTTAGAGTTATCATTGCTGTTTATCTATGTTTGCTAGCTCTAGATTAC
CCGTCAGTGACATGTATTGCAGTAAGGATGTCGTTTTTGATCAGTACTTTGGTAACCTGGTGATATTTGTTATCAGTTTT
CGCTGTCGTGGTCTGGATTCTTCAGTCCACATAAAGAAGATTATTATGCTTGGATATTTGTCTGTCGATTTTCATGAGTT
AGCCTCTGGTGCTTATTTTGGTTTACTGTTTCTGTTTTAGTTTAGCTCTATTGCTGTATCTCTGAAAGGATTTTTGTTTG
GTTGAATCAAACATAAAGCAGGGGTGTTATGCTTGCTTCTA-------GTTCTTTGGA----------------------
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----------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------------
-----------------SS---------------------------------S-S-SS------------------SS--
-------S----S--S-S----S---S-S------S--SSSSSSSS---------S-S-----S--S-----S---SS-S
SSSSSSSSSSSS---S-------------S-----SSS--------------SSS------S-----------S--S---
-----------------SS--SS----SS--------------S--S-----------------S-----SS-S---S-S
------S-----------------S--------------S------S-S-----------------------S--SS-S-
---SSSSSSSSSSSSSS----SSS---S-----S---SS--S---S--------SS-S----------S----S------
--S----S--------S---------------------------------------------------------S-----
----SS----------S--------S-------------------SS-------S-------------------------
------------S-------------------S--S----------------S--------S----------------S-
-----------------S-S------------------S-----------------------------------------
------S------------------------S--S------------------------------------S--------
--------------------------------------------------------------------------------
-----------------------------SSS---------------S--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------S------------
-----------------------------------S-----------------S--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------S---------------S-SSSS-----
------------------------S-------------------------------------S-----------------
S-----------S----------------S--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-S------------S--------S----------------------------------S-SS--------------S---
--------S-----------------------------------------------------------------------
---------------------------------------------------------------------------S----
--------------------------------------------------------------------------------
--------------------------------------------------S-----------------------------
-------------------------------------------------------------S------------------
-S------------------------------------------------------------------------------
------------------------------------------------------------S-----S----S--------
-----------------------------------------------------S-------S------------------
------------S--------SS---------------------SS--S-------------------------------
------------------S------S--------------------S---SS---------------------S-----S
-----------------S---S---------S------S---S-----------------S-----------S-------
------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_216
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------CTCGGACCTCGGATGAACAA------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------
>reverse_2255
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------CGATGGCCTCATGCTTTTGA----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------
>forward_218
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------TCGGACCTCGGATGAACAATG----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------
>reverse_2329
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------TAGGATCAAGCTCCCCTCTGG---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------
>forward_782
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------TATTCGGCCTGTTACCAGCT------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------
>reverse_2872
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------ACTTGAGTT
AGCCCCTGGTG---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------
