Multiple sequence alignment - TraesCS5B01G054800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G054800 chr5B 100.000 3334 0 0 1 3334 59928738 59925405 0.000000e+00 6157.0
1 TraesCS5B01G054800 chr5B 82.500 160 16 6 2134 2290 558121109 558120959 2.700000e-26 130.0
2 TraesCS5B01G054800 chr5B 86.441 59 8 0 2134 2192 399300108 399300166 7.720000e-07 65.8
3 TraesCS5B01G054800 chr5B 100.000 28 0 0 381 408 479729437 479729464 6.000000e-03 52.8
4 TraesCS5B01G054800 chr5B 100.000 28 0 0 381 408 631894605 631894578 6.000000e-03 52.8
5 TraesCS5B01G054800 chr5D 90.450 1623 105 26 880 2461 56952727 56951114 0.000000e+00 2093.0
6 TraesCS5B01G054800 chr5D 91.466 457 18 10 427 867 56953159 56952708 2.840000e-170 608.0
7 TraesCS5B01G054800 chr5D 91.906 383 19 4 2544 2919 56951113 56950736 2.950000e-145 525.0
8 TraesCS5B01G054800 chr5D 85.901 383 18 12 12 381 56953520 56953161 3.140000e-100 375.0
9 TraesCS5B01G054800 chr5D 82.036 167 16 7 2134 2295 456341900 456341743 2.700000e-26 130.0
10 TraesCS5B01G054800 chr5D 86.441 59 8 0 2134 2192 340511768 340511826 7.720000e-07 65.8
11 TraesCS5B01G054800 chr5A 92.664 1145 64 5 882 2016 45371636 45370502 0.000000e+00 1631.0
12 TraesCS5B01G054800 chr5A 88.483 712 41 21 2057 2762 45370495 45369819 0.000000e+00 822.0
13 TraesCS5B01G054800 chr5A 88.162 321 19 5 425 726 45372114 45371794 6.800000e-97 364.0
14 TraesCS5B01G054800 chr5A 89.643 280 19 6 1 274 45372460 45372185 6.850000e-92 348.0
15 TraesCS5B01G054800 chr5A 87.943 141 7 5 732 867 45371754 45371619 1.240000e-34 158.0
16 TraesCS5B01G054800 chr5A 82.036 167 16 7 2134 2295 574197553 574197396 2.700000e-26 130.0
17 TraesCS5B01G054800 chr5A 85.714 63 8 1 2130 2192 441478544 441478605 7.720000e-07 65.8
18 TraesCS5B01G054800 chr5A 94.737 38 2 0 297 334 45372183 45372146 3.590000e-05 60.2
19 TraesCS5B01G054800 chr3D 96.040 101 4 0 2990 3090 477627872 477627772 7.400000e-37 165.0
20 TraesCS5B01G054800 chr2B 100.000 29 0 0 380 408 625257754 625257726 2.000000e-03 54.7
21 TraesCS5B01G054800 chr2B 100.000 28 0 0 381 408 111447280 111447307 6.000000e-03 52.8
22 TraesCS5B01G054800 chr7B 100.000 28 0 0 381 408 744411199 744411226 6.000000e-03 52.8
23 TraesCS5B01G054800 chr7B 100.000 28 0 0 381 408 744458856 744458883 6.000000e-03 52.8
24 TraesCS5B01G054800 chr7B 100.000 28 0 0 381 408 744489904 744489931 6.000000e-03 52.8
25 TraesCS5B01G054800 chr4B 100.000 28 0 0 381 408 643626703 643626676 6.000000e-03 52.8
26 TraesCS5B01G054800 chr3B 100.000 28 0 0 381 408 799110664 799110691 6.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G054800 chr5B 59925405 59928738 3333 True 6157.000000 6157 100.00000 1 3334 1 chr5B.!!$R1 3333
1 TraesCS5B01G054800 chr5D 56950736 56953520 2784 True 900.250000 2093 89.93075 12 2919 4 chr5D.!!$R2 2907
2 TraesCS5B01G054800 chr5A 45369819 45372460 2641 True 563.866667 1631 90.27200 1 2762 6 chr5A.!!$R2 2761

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
863 942 0.813821 GCATCTGCCTTTTCTGGTCC 59.186 55.0 0.00 0.0 34.31 4.46 F
1094 1173 0.105039 ACCGCCGGATTCATCTTCTC 59.895 55.0 11.71 0.0 0.00 2.87 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1921 2038 0.097674 GCATCCATCACGCAGAACAC 59.902 55.0 0.00 0.0 0.00 3.32 R
3048 3186 0.107643 TGTGAATCAACACTCGGCCA 59.892 50.0 2.24 0.0 40.87 5.36 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
71 72 1.226717 GACGTGACGCTCATCCCTC 60.227 63.158 4.25 0.00 0.00 4.30
94 95 0.827507 AAAATTGGCTCCACACGGCT 60.828 50.000 0.00 0.00 0.00 5.52
101 102 1.443407 CTCCACACGGCTGGATAGG 59.557 63.158 3.95 0.00 39.72 2.57
209 211 4.756630 TCATGATCATGACCGCCG 57.243 55.556 30.27 7.39 42.42 6.46
214 216 1.067416 GATCATGACCGCCGTGCTA 59.933 57.895 0.00 0.00 0.00 3.49
277 286 6.319048 ACAATGAATGATCTCTGGGTAAGT 57.681 37.500 0.00 0.00 0.00 2.24
278 287 6.118170 ACAATGAATGATCTCTGGGTAAGTG 58.882 40.000 0.00 0.00 0.00 3.16
340 353 2.122321 GGCGACGATTATCACGACG 58.878 57.895 0.00 0.00 46.70 5.12
341 354 1.266786 GGCGACGATTATCACGACGG 61.267 60.000 0.00 0.00 45.01 4.79
359 375 1.060553 CGGTGATGATGCGTGTGTAAC 59.939 52.381 0.00 0.00 37.35 2.50
382 398 6.080406 ACGTTGCTAGTTAAGTCGTACTTAC 58.920 40.000 6.88 0.00 40.12 2.34
383 399 6.073003 ACGTTGCTAGTTAAGTCGTACTTACT 60.073 38.462 6.88 9.32 40.12 2.24
384 400 6.464204 CGTTGCTAGTTAAGTCGTACTTACTC 59.536 42.308 6.88 4.90 40.12 2.59
385 401 6.428385 TGCTAGTTAAGTCGTACTTACTCC 57.572 41.667 6.88 1.17 40.12 3.85
386 402 5.939883 TGCTAGTTAAGTCGTACTTACTCCA 59.060 40.000 6.88 6.69 40.12 3.86
387 403 6.600822 TGCTAGTTAAGTCGTACTTACTCCAT 59.399 38.462 6.88 0.00 40.12 3.41
388 404 7.131565 GCTAGTTAAGTCGTACTTACTCCATC 58.868 42.308 6.88 0.00 40.12 3.51
389 405 6.448207 AGTTAAGTCGTACTTACTCCATCC 57.552 41.667 6.88 0.00 40.12 3.51
390 406 5.065731 AGTTAAGTCGTACTTACTCCATCCG 59.934 44.000 6.88 0.00 40.12 4.18
391 407 2.996631 AGTCGTACTTACTCCATCCGT 58.003 47.619 0.00 0.00 0.00 4.69
392 408 3.350833 AGTCGTACTTACTCCATCCGTT 58.649 45.455 0.00 0.00 0.00 4.44
393 409 3.376546 AGTCGTACTTACTCCATCCGTTC 59.623 47.826 0.00 0.00 0.00 3.95
394 410 2.684881 TCGTACTTACTCCATCCGTTCC 59.315 50.000 0.00 0.00 0.00 3.62
395 411 2.540361 CGTACTTACTCCATCCGTTCCG 60.540 54.545 0.00 0.00 0.00 4.30
396 412 1.843368 ACTTACTCCATCCGTTCCGA 58.157 50.000 0.00 0.00 0.00 4.55
397 413 2.385803 ACTTACTCCATCCGTTCCGAT 58.614 47.619 0.00 0.00 0.00 4.18
398 414 2.764572 ACTTACTCCATCCGTTCCGATT 59.235 45.455 0.00 0.00 0.00 3.34
399 415 3.197116 ACTTACTCCATCCGTTCCGATTT 59.803 43.478 0.00 0.00 0.00 2.17
400 416 4.403432 ACTTACTCCATCCGTTCCGATTTA 59.597 41.667 0.00 0.00 0.00 1.40
401 417 3.175109 ACTCCATCCGTTCCGATTTAC 57.825 47.619 0.00 0.00 0.00 2.01
402 418 2.764572 ACTCCATCCGTTCCGATTTACT 59.235 45.455 0.00 0.00 0.00 2.24
403 419 3.181478 ACTCCATCCGTTCCGATTTACTC 60.181 47.826 0.00 0.00 0.00 2.59
405 421 2.480759 CCATCCGTTCCGATTTACTCGT 60.481 50.000 0.00 0.00 46.18 4.18
406 422 2.549633 TCCGTTCCGATTTACTCGTC 57.450 50.000 0.00 0.00 46.18 4.20
407 423 1.186030 CCGTTCCGATTTACTCGTCG 58.814 55.000 0.00 0.00 46.18 5.12
408 424 1.202065 CCGTTCCGATTTACTCGTCGA 60.202 52.381 0.00 0.00 46.18 4.20
409 425 2.508867 CGTTCCGATTTACTCGTCGAA 58.491 47.619 0.00 0.00 46.18 3.71
410 426 2.910482 CGTTCCGATTTACTCGTCGAAA 59.090 45.455 0.00 0.00 46.18 3.46
411 427 3.545078 CGTTCCGATTTACTCGTCGAAAT 59.455 43.478 0.00 0.00 46.18 2.17
412 428 4.030977 CGTTCCGATTTACTCGTCGAAATT 59.969 41.667 0.00 0.00 46.18 1.82
413 429 5.245850 GTTCCGATTTACTCGTCGAAATTG 58.754 41.667 0.00 0.00 46.18 2.32
414 430 4.735985 TCCGATTTACTCGTCGAAATTGA 58.264 39.130 6.87 0.00 46.18 2.57
415 431 5.162794 TCCGATTTACTCGTCGAAATTGAA 58.837 37.500 6.87 0.00 46.18 2.69
416 432 5.061311 TCCGATTTACTCGTCGAAATTGAAC 59.939 40.000 6.87 0.00 46.18 3.18
417 433 4.942112 CGATTTACTCGTCGAAATTGAACG 59.058 41.667 0.00 2.14 42.56 3.95
418 434 4.634349 TTTACTCGTCGAAATTGAACGG 57.366 40.909 0.00 2.73 0.00 4.44
419 435 2.427232 ACTCGTCGAAATTGAACGGA 57.573 45.000 0.00 0.00 0.00 4.69
420 436 2.746269 ACTCGTCGAAATTGAACGGAA 58.254 42.857 0.00 0.00 0.00 4.30
421 437 2.729882 ACTCGTCGAAATTGAACGGAAG 59.270 45.455 0.00 2.71 0.00 3.46
446 462 8.976353 AGTATATATAAGAGGTGAGAGCCATTG 58.024 37.037 0.00 0.00 0.00 2.82
492 508 3.264193 TCTCCCGGGGAATGATATTGATG 59.736 47.826 23.50 0.49 0.00 3.07
548 575 5.069119 ACAATATGCTGCTGCTACTGTAGTA 59.931 40.000 17.00 10.73 40.48 1.82
563 590 4.701171 ACTGTAGTAGTGTACTTCTGGAGC 59.299 45.833 1.95 0.00 38.49 4.70
649 689 1.620739 ATCCATCCTGCTGCACGTCT 61.621 55.000 0.00 0.00 0.00 4.18
666 706 3.379372 ACGTCTACCGCTCAGCTTAATTA 59.621 43.478 0.00 0.00 41.42 1.40
671 711 3.031736 ACCGCTCAGCTTAATTAGAGGA 58.968 45.455 0.00 0.00 33.62 3.71
771 845 2.477525 GCAACATTCAGAAGCAGCTAGC 60.478 50.000 6.62 6.62 46.19 3.42
848 927 7.307632 CCTGTTTAGCTACACATATGAAGCATC 60.308 40.741 22.32 13.69 37.44 3.91
849 928 7.275183 TGTTTAGCTACACATATGAAGCATCT 58.725 34.615 22.32 11.00 37.44 2.90
850 929 7.225341 TGTTTAGCTACACATATGAAGCATCTG 59.775 37.037 22.32 8.37 37.44 2.90
851 930 4.063689 AGCTACACATATGAAGCATCTGC 58.936 43.478 22.32 11.21 37.44 4.26
852 931 3.188048 GCTACACATATGAAGCATCTGCC 59.812 47.826 10.38 0.00 43.38 4.85
853 932 3.572632 ACACATATGAAGCATCTGCCT 57.427 42.857 10.38 0.00 43.38 4.75
854 933 3.894759 ACACATATGAAGCATCTGCCTT 58.105 40.909 10.38 0.00 43.38 4.35
855 934 4.275810 ACACATATGAAGCATCTGCCTTT 58.724 39.130 10.38 0.00 43.38 3.11
856 935 4.708421 ACACATATGAAGCATCTGCCTTTT 59.292 37.500 10.38 0.00 43.38 2.27
857 936 5.163581 ACACATATGAAGCATCTGCCTTTTC 60.164 40.000 10.38 0.00 43.38 2.29
858 937 5.067413 CACATATGAAGCATCTGCCTTTTCT 59.933 40.000 10.38 0.00 43.38 2.52
859 938 5.067413 ACATATGAAGCATCTGCCTTTTCTG 59.933 40.000 10.38 0.00 43.38 3.02
860 939 2.165167 TGAAGCATCTGCCTTTTCTGG 58.835 47.619 0.00 0.00 43.38 3.86
861 940 2.165998 GAAGCATCTGCCTTTTCTGGT 58.834 47.619 0.00 0.00 43.38 4.00
862 941 1.831580 AGCATCTGCCTTTTCTGGTC 58.168 50.000 0.00 0.00 43.38 4.02
863 942 0.813821 GCATCTGCCTTTTCTGGTCC 59.186 55.000 0.00 0.00 34.31 4.46
864 943 1.615384 GCATCTGCCTTTTCTGGTCCT 60.615 52.381 0.00 0.00 34.31 3.85
865 944 2.800250 CATCTGCCTTTTCTGGTCCTT 58.200 47.619 0.00 0.00 0.00 3.36
866 945 3.160269 CATCTGCCTTTTCTGGTCCTTT 58.840 45.455 0.00 0.00 0.00 3.11
867 946 3.312736 TCTGCCTTTTCTGGTCCTTTT 57.687 42.857 0.00 0.00 0.00 2.27
868 947 3.222603 TCTGCCTTTTCTGGTCCTTTTC 58.777 45.455 0.00 0.00 0.00 2.29
869 948 1.953686 TGCCTTTTCTGGTCCTTTTCG 59.046 47.619 0.00 0.00 0.00 3.46
870 949 2.227194 GCCTTTTCTGGTCCTTTTCGA 58.773 47.619 0.00 0.00 0.00 3.71
871 950 2.621526 GCCTTTTCTGGTCCTTTTCGAA 59.378 45.455 0.00 0.00 0.00 3.71
872 951 3.067601 GCCTTTTCTGGTCCTTTTCGAAA 59.932 43.478 6.47 6.47 0.00 3.46
873 952 4.440940 GCCTTTTCTGGTCCTTTTCGAAAA 60.441 41.667 21.35 21.35 33.89 2.29
874 953 5.656480 CCTTTTCTGGTCCTTTTCGAAAAA 58.344 37.500 22.67 7.78 34.40 1.94
931 1010 3.291809 TTGCTGCTCACATGTCAAATG 57.708 42.857 0.00 0.00 0.00 2.32
1014 1093 3.551846 AGGAACAATGAACCAGTTCGTT 58.448 40.909 11.34 11.34 46.39 3.85
1017 1096 3.208747 ACAATGAACCAGTTCGTTCCT 57.791 42.857 13.70 1.82 44.39 3.36
1094 1173 0.105039 ACCGCCGGATTCATCTTCTC 59.895 55.000 11.71 0.00 0.00 2.87
1110 1189 2.403252 TCTCTTTTCTTGGATCGGCC 57.597 50.000 0.00 0.00 37.10 6.13
1111 1190 1.009829 CTCTTTTCTTGGATCGGCCG 58.990 55.000 22.12 22.12 40.66 6.13
1112 1191 0.611200 TCTTTTCTTGGATCGGCCGA 59.389 50.000 33.12 33.12 40.66 5.54
1120 1211 1.371183 GGATCGGCCGATGGAATCA 59.629 57.895 43.46 14.10 45.97 2.57
1276 1375 1.916777 CCGTGGTTCCAGTACCCCT 60.917 63.158 0.00 0.00 37.39 4.79
1291 1390 0.530744 CCCCTTCGTCGATGAAGACA 59.469 55.000 37.40 12.05 46.64 3.41
1295 1394 2.663602 CCTTCGTCGATGAAGACAACTG 59.336 50.000 37.40 21.51 46.64 3.16
1333 1432 0.741326 CTTCTCGGAGATCTTCGGCA 59.259 55.000 23.08 7.32 33.89 5.69
1374 1473 3.011517 AGGCCGTGCAAGGAGGAT 61.012 61.111 23.82 1.10 0.00 3.24
1387 1486 2.042464 AGGAGGATGATAAGCAGCGAA 58.958 47.619 0.00 0.00 32.46 4.70
1526 1625 2.509336 CTCGGTGGTCACGATGGC 60.509 66.667 0.00 0.00 39.89 4.40
1527 1626 3.295304 CTCGGTGGTCACGATGGCA 62.295 63.158 0.00 0.00 39.89 4.92
1529 1628 1.745115 CGGTGGTCACGATGGCATT 60.745 57.895 0.00 0.00 0.00 3.56
1537 1636 1.153086 ACGATGGCATTCAGGAGGC 60.153 57.895 0.00 0.00 0.00 4.70
1698 1803 2.600769 ACGTGGTCGAGGCCTTCT 60.601 61.111 6.77 0.00 40.62 2.85
1887 1992 4.156664 TCGTCTTACTTCGAGTTTCCTG 57.843 45.455 0.00 0.00 0.00 3.86
1890 1995 4.236147 GTCTTACTTCGAGTTTCCTGGAC 58.764 47.826 0.00 0.00 0.00 4.02
1891 1996 3.893200 TCTTACTTCGAGTTTCCTGGACA 59.107 43.478 0.00 0.00 0.00 4.02
1892 1997 2.528041 ACTTCGAGTTTCCTGGACAC 57.472 50.000 4.81 4.81 0.00 3.67
1893 1998 2.040178 ACTTCGAGTTTCCTGGACACT 58.960 47.619 15.09 15.09 0.00 3.55
1894 1999 2.434702 ACTTCGAGTTTCCTGGACACTT 59.565 45.455 16.16 1.35 0.00 3.16
1895 2000 2.526304 TCGAGTTTCCTGGACACTTG 57.474 50.000 19.90 19.90 0.00 3.16
1896 2001 1.070134 TCGAGTTTCCTGGACACTTGG 59.930 52.381 23.65 15.80 28.08 3.61
1897 2002 1.878102 CGAGTTTCCTGGACACTTGGG 60.878 57.143 18.68 8.26 0.00 4.12
1898 2003 0.178990 AGTTTCCTGGACACTTGGGC 60.179 55.000 9.68 0.00 0.00 5.36
1921 2038 3.818787 GGCCGCCATTGCTGACTG 61.819 66.667 3.91 0.00 34.43 3.51
2021 2140 6.294453 CCACTGCAACAAAGTATGTAATTCCA 60.294 38.462 0.00 0.00 42.99 3.53
2041 2160 3.838271 CCCTCCGCAGCTTCGCTA 61.838 66.667 0.00 0.00 36.40 4.26
2042 2161 2.583593 CCTCCGCAGCTTCGCTAC 60.584 66.667 0.00 0.00 36.40 3.58
2043 2162 2.492090 CTCCGCAGCTTCGCTACT 59.508 61.111 0.00 0.00 36.40 2.57
2044 2163 1.587613 CTCCGCAGCTTCGCTACTC 60.588 63.158 0.00 0.00 36.40 2.59
2045 2164 2.951745 CCGCAGCTTCGCTACTCG 60.952 66.667 0.00 0.00 36.40 4.18
2046 2165 3.611792 CGCAGCTTCGCTACTCGC 61.612 66.667 0.00 0.00 36.40 5.03
2053 2172 0.651551 CTTCGCTACTCGCTAGTCGT 59.348 55.000 0.00 0.00 37.15 4.34
2096 2223 1.375853 TTCTTGGCAATGGCGATCGG 61.376 55.000 18.30 0.01 42.47 4.18
2120 2247 3.200483 TGATCATCTCGTTCTTGGCATG 58.800 45.455 0.00 0.00 0.00 4.06
2121 2248 3.118665 TGATCATCTCGTTCTTGGCATGA 60.119 43.478 0.00 0.00 0.00 3.07
2325 2452 2.040213 GATGCCGCCATTCACGACTG 62.040 60.000 0.00 0.00 0.00 3.51
2357 2484 5.388654 AGTTCAAATGACCCAGAATTGAGT 58.611 37.500 0.00 0.00 32.21 3.41
2395 2523 5.163953 CGTGATCGCTTTACTTTGTTCAGAT 60.164 40.000 4.48 0.00 0.00 2.90
2473 2601 8.846211 CAAGTCAACCTACTCCTTTTATTTTGA 58.154 33.333 0.00 0.00 0.00 2.69
2474 2602 8.990163 AGTCAACCTACTCCTTTTATTTTGAA 57.010 30.769 0.00 0.00 0.00 2.69
2489 2617 5.590104 ATTTTGAAAAATGTAAGGCGTGC 57.410 34.783 0.00 0.00 37.24 5.34
2595 2723 8.918202 TGAAAGTAATTCTTGTGGTTATCACT 57.082 30.769 0.00 0.00 41.52 3.41
2600 2728 9.216117 AGTAATTCTTGTGGTTATCACTGTAAC 57.784 33.333 0.00 0.00 46.20 2.50
2640 2768 4.567959 GTGCATGGAATTTATGGTCAAAGC 59.432 41.667 0.00 0.00 0.00 3.51
2762 2893 3.430513 GGGGTCCGTCTAAAACTCATCTC 60.431 52.174 0.00 0.00 0.00 2.75
2764 2895 3.436496 GTCCGTCTAAAACTCATCTCGG 58.564 50.000 0.00 0.00 38.36 4.63
2841 2974 5.042593 CACAGCTAAGTGATGTCATCTCTC 58.957 45.833 15.86 6.07 44.25 3.20
2861 2994 4.136796 CTCTTGTGTGGTCTCATTTTCCA 58.863 43.478 0.00 0.00 0.00 3.53
2922 3060 8.175649 ACGTTTGTTTTTATTTGTTGTAGGTG 57.824 30.769 0.00 0.00 0.00 4.00
2923 3061 7.813627 ACGTTTGTTTTTATTTGTTGTAGGTGT 59.186 29.630 0.00 0.00 0.00 4.16
2924 3062 8.105135 CGTTTGTTTTTATTTGTTGTAGGTGTG 58.895 33.333 0.00 0.00 0.00 3.82
2925 3063 8.927721 GTTTGTTTTTATTTGTTGTAGGTGTGT 58.072 29.630 0.00 0.00 0.00 3.72
2926 3064 9.490379 TTTGTTTTTATTTGTTGTAGGTGTGTT 57.510 25.926 0.00 0.00 0.00 3.32
2927 3065 8.467402 TGTTTTTATTTGTTGTAGGTGTGTTG 57.533 30.769 0.00 0.00 0.00 3.33
2928 3066 8.088981 TGTTTTTATTTGTTGTAGGTGTGTTGT 58.911 29.630 0.00 0.00 0.00 3.32
2929 3067 8.927721 GTTTTTATTTGTTGTAGGTGTGTTGTT 58.072 29.630 0.00 0.00 0.00 2.83
2930 3068 9.490379 TTTTTATTTGTTGTAGGTGTGTTGTTT 57.510 25.926 0.00 0.00 0.00 2.83
2931 3069 9.490379 TTTTATTTGTTGTAGGTGTGTTGTTTT 57.510 25.926 0.00 0.00 0.00 2.43
2932 3070 9.490379 TTTATTTGTTGTAGGTGTGTTGTTTTT 57.510 25.926 0.00 0.00 0.00 1.94
2933 3071 6.771188 TTTGTTGTAGGTGTGTTGTTTTTG 57.229 33.333 0.00 0.00 0.00 2.44
2934 3072 5.455056 TGTTGTAGGTGTGTTGTTTTTGT 57.545 34.783 0.00 0.00 0.00 2.83
2935 3073 5.462405 TGTTGTAGGTGTGTTGTTTTTGTC 58.538 37.500 0.00 0.00 0.00 3.18
2936 3074 4.705337 TGTAGGTGTGTTGTTTTTGTCC 57.295 40.909 0.00 0.00 0.00 4.02
2937 3075 3.444388 TGTAGGTGTGTTGTTTTTGTCCC 59.556 43.478 0.00 0.00 0.00 4.46
2938 3076 2.530701 AGGTGTGTTGTTTTTGTCCCA 58.469 42.857 0.00 0.00 0.00 4.37
2939 3077 3.103742 AGGTGTGTTGTTTTTGTCCCAT 58.896 40.909 0.00 0.00 0.00 4.00
2940 3078 3.118811 AGGTGTGTTGTTTTTGTCCCATG 60.119 43.478 0.00 0.00 0.00 3.66
2941 3079 3.194062 GTGTGTTGTTTTTGTCCCATGG 58.806 45.455 4.14 4.14 0.00 3.66
2942 3080 3.099905 TGTGTTGTTTTTGTCCCATGGA 58.900 40.909 15.22 0.00 0.00 3.41
2943 3081 3.708631 TGTGTTGTTTTTGTCCCATGGAT 59.291 39.130 15.22 0.00 32.73 3.41
2944 3082 4.163078 TGTGTTGTTTTTGTCCCATGGATT 59.837 37.500 15.22 0.00 32.73 3.01
2945 3083 4.511082 GTGTTGTTTTTGTCCCATGGATTG 59.489 41.667 15.22 0.00 32.73 2.67
2946 3084 4.406972 TGTTGTTTTTGTCCCATGGATTGA 59.593 37.500 15.22 0.00 32.73 2.57
2947 3085 5.071519 TGTTGTTTTTGTCCCATGGATTGAT 59.928 36.000 15.22 0.00 32.73 2.57
2948 3086 5.149973 TGTTTTTGTCCCATGGATTGATG 57.850 39.130 15.22 0.00 32.73 3.07
2949 3087 4.592351 TGTTTTTGTCCCATGGATTGATGT 59.408 37.500 15.22 0.00 32.73 3.06
2950 3088 5.777223 TGTTTTTGTCCCATGGATTGATGTA 59.223 36.000 15.22 0.00 32.73 2.29
2951 3089 6.268617 TGTTTTTGTCCCATGGATTGATGTAA 59.731 34.615 15.22 0.00 32.73 2.41
2952 3090 7.038445 TGTTTTTGTCCCATGGATTGATGTAAT 60.038 33.333 15.22 0.00 32.73 1.89
2953 3091 6.713762 TTTGTCCCATGGATTGATGTAATC 57.286 37.500 15.22 0.00 43.64 1.75
2954 3092 5.651612 TGTCCCATGGATTGATGTAATCT 57.348 39.130 15.22 0.00 43.81 2.40
2955 3093 6.017211 TGTCCCATGGATTGATGTAATCTT 57.983 37.500 15.22 0.00 43.81 2.40
2956 3094 6.434302 TGTCCCATGGATTGATGTAATCTTT 58.566 36.000 15.22 0.00 43.81 2.52
2957 3095 6.896860 TGTCCCATGGATTGATGTAATCTTTT 59.103 34.615 15.22 0.00 43.81 2.27
2958 3096 7.147863 TGTCCCATGGATTGATGTAATCTTTTG 60.148 37.037 15.22 0.00 43.81 2.44
2959 3097 6.896860 TCCCATGGATTGATGTAATCTTTTGT 59.103 34.615 15.22 0.00 45.81 2.83
2960 3098 7.068593 TCCCATGGATTGATGTAATCTTTTGTC 59.931 37.037 15.22 0.00 45.81 3.18
2961 3099 7.069085 CCCATGGATTGATGTAATCTTTTGTCT 59.931 37.037 15.22 0.00 45.81 3.41
2962 3100 7.919091 CCATGGATTGATGTAATCTTTTGTCTG 59.081 37.037 5.56 0.00 45.81 3.51
2963 3101 8.464404 CATGGATTGATGTAATCTTTTGTCTGT 58.536 33.333 0.00 0.00 45.81 3.41
2964 3102 8.408043 TGGATTGATGTAATCTTTTGTCTGTT 57.592 30.769 0.00 0.00 45.81 3.16
2965 3103 8.514594 TGGATTGATGTAATCTTTTGTCTGTTC 58.485 33.333 0.00 0.00 45.81 3.18
2966 3104 7.970614 GGATTGATGTAATCTTTTGTCTGTTCC 59.029 37.037 0.00 0.00 45.81 3.62
2967 3105 7.815840 TTGATGTAATCTTTTGTCTGTTCCA 57.184 32.000 0.00 0.00 45.81 3.53
2968 3106 8.408043 TTGATGTAATCTTTTGTCTGTTCCAT 57.592 30.769 0.00 0.00 45.81 3.41
2969 3107 8.408043 TGATGTAATCTTTTGTCTGTTCCATT 57.592 30.769 0.00 0.00 45.81 3.16
2970 3108 8.298854 TGATGTAATCTTTTGTCTGTTCCATTG 58.701 33.333 0.00 0.00 45.81 2.82
2971 3109 6.980593 TGTAATCTTTTGTCTGTTCCATTGG 58.019 36.000 0.00 0.00 0.00 3.16
2972 3110 5.473066 AATCTTTTGTCTGTTCCATTGGG 57.527 39.130 2.09 0.00 0.00 4.12
2973 3111 3.909732 TCTTTTGTCTGTTCCATTGGGT 58.090 40.909 2.09 0.00 34.93 4.51
2974 3112 4.285863 TCTTTTGTCTGTTCCATTGGGTT 58.714 39.130 2.09 0.00 34.93 4.11
2975 3113 4.099266 TCTTTTGTCTGTTCCATTGGGTTG 59.901 41.667 2.09 0.00 34.93 3.77
2976 3114 2.746279 TGTCTGTTCCATTGGGTTGT 57.254 45.000 2.09 0.00 34.93 3.32
2977 3115 3.025322 TGTCTGTTCCATTGGGTTGTT 57.975 42.857 2.09 0.00 34.93 2.83
2978 3116 2.692557 TGTCTGTTCCATTGGGTTGTTG 59.307 45.455 2.09 0.00 34.93 3.33
2979 3117 1.686052 TCTGTTCCATTGGGTTGTTGC 59.314 47.619 2.09 0.00 34.93 4.17
2980 3118 0.387202 TGTTCCATTGGGTTGTTGCG 59.613 50.000 2.09 0.00 34.93 4.85
2981 3119 0.387565 GTTCCATTGGGTTGTTGCGT 59.612 50.000 2.09 0.00 34.93 5.24
2982 3120 1.115467 TTCCATTGGGTTGTTGCGTT 58.885 45.000 2.09 0.00 34.93 4.84
2983 3121 1.115467 TCCATTGGGTTGTTGCGTTT 58.885 45.000 2.09 0.00 34.93 3.60
2984 3122 1.482593 TCCATTGGGTTGTTGCGTTTT 59.517 42.857 2.09 0.00 34.93 2.43
2985 3123 2.093447 TCCATTGGGTTGTTGCGTTTTT 60.093 40.909 2.09 0.00 34.93 1.94
2986 3124 3.132289 TCCATTGGGTTGTTGCGTTTTTA 59.868 39.130 2.09 0.00 34.93 1.52
2987 3125 4.061596 CCATTGGGTTGTTGCGTTTTTAT 58.938 39.130 0.00 0.00 0.00 1.40
2988 3126 4.513318 CCATTGGGTTGTTGCGTTTTTATT 59.487 37.500 0.00 0.00 0.00 1.40
2989 3127 5.696724 CCATTGGGTTGTTGCGTTTTTATTA 59.303 36.000 0.00 0.00 0.00 0.98
2990 3128 6.346999 CCATTGGGTTGTTGCGTTTTTATTAC 60.347 38.462 0.00 0.00 0.00 1.89
2991 3129 5.517322 TGGGTTGTTGCGTTTTTATTACT 57.483 34.783 0.00 0.00 0.00 2.24
2992 3130 6.630444 TGGGTTGTTGCGTTTTTATTACTA 57.370 33.333 0.00 0.00 0.00 1.82
2993 3131 6.670233 TGGGTTGTTGCGTTTTTATTACTAG 58.330 36.000 0.00 0.00 0.00 2.57
2994 3132 6.262720 TGGGTTGTTGCGTTTTTATTACTAGT 59.737 34.615 0.00 0.00 0.00 2.57
2995 3133 7.140705 GGGTTGTTGCGTTTTTATTACTAGTT 58.859 34.615 0.00 0.00 0.00 2.24
2996 3134 7.113825 GGGTTGTTGCGTTTTTATTACTAGTTG 59.886 37.037 0.00 0.00 0.00 3.16
2997 3135 7.856894 GGTTGTTGCGTTTTTATTACTAGTTGA 59.143 33.333 0.00 0.00 0.00 3.18
2998 3136 9.389570 GTTGTTGCGTTTTTATTACTAGTTGAT 57.610 29.630 0.00 0.00 0.00 2.57
2999 3137 8.942669 TGTTGCGTTTTTATTACTAGTTGATG 57.057 30.769 0.00 0.00 0.00 3.07
3000 3138 7.535940 TGTTGCGTTTTTATTACTAGTTGATGC 59.464 33.333 0.00 0.00 0.00 3.91
3001 3139 6.548171 TGCGTTTTTATTACTAGTTGATGCC 58.452 36.000 0.00 0.00 0.00 4.40
3002 3140 5.969435 GCGTTTTTATTACTAGTTGATGCCC 59.031 40.000 0.00 0.00 0.00 5.36
3003 3141 6.492254 CGTTTTTATTACTAGTTGATGCCCC 58.508 40.000 0.00 0.00 0.00 5.80
3004 3142 6.492254 GTTTTTATTACTAGTTGATGCCCCG 58.508 40.000 0.00 0.00 0.00 5.73
3005 3143 2.256117 ATTACTAGTTGATGCCCCGC 57.744 50.000 0.00 0.00 0.00 6.13
3006 3144 0.179094 TTACTAGTTGATGCCCCGCG 60.179 55.000 0.00 0.00 0.00 6.46
3007 3145 2.638330 TACTAGTTGATGCCCCGCGC 62.638 60.000 0.00 0.00 38.31 6.86
3023 3161 3.884900 GCGTTGTTGCGGGATACT 58.115 55.556 0.00 0.00 0.00 2.12
3024 3162 3.053662 GCGTTGTTGCGGGATACTA 57.946 52.632 0.00 0.00 0.00 1.82
3025 3163 1.578583 GCGTTGTTGCGGGATACTAT 58.421 50.000 0.00 0.00 0.00 2.12
3026 3164 2.746269 GCGTTGTTGCGGGATACTATA 58.254 47.619 0.00 0.00 0.00 1.31
3027 3165 2.729882 GCGTTGTTGCGGGATACTATAG 59.270 50.000 0.00 0.00 0.00 1.31
3028 3166 3.797865 GCGTTGTTGCGGGATACTATAGT 60.798 47.826 10.87 10.87 0.00 2.12
3029 3167 4.365723 CGTTGTTGCGGGATACTATAGTT 58.634 43.478 11.40 0.00 0.00 2.24
3030 3168 4.443394 CGTTGTTGCGGGATACTATAGTTC 59.557 45.833 11.40 8.37 0.00 3.01
3031 3169 5.353938 GTTGTTGCGGGATACTATAGTTCA 58.646 41.667 11.40 0.00 0.00 3.18
3032 3170 5.801531 TGTTGCGGGATACTATAGTTCAT 57.198 39.130 11.40 0.00 0.00 2.57
3033 3171 6.169557 TGTTGCGGGATACTATAGTTCATT 57.830 37.500 11.40 0.00 0.00 2.57
3034 3172 6.588204 TGTTGCGGGATACTATAGTTCATTT 58.412 36.000 11.40 0.00 0.00 2.32
3035 3173 6.481976 TGTTGCGGGATACTATAGTTCATTTG 59.518 38.462 11.40 0.00 0.00 2.32
3036 3174 6.413783 TGCGGGATACTATAGTTCATTTGA 57.586 37.500 11.40 0.00 0.00 2.69
3037 3175 6.220930 TGCGGGATACTATAGTTCATTTGAC 58.779 40.000 11.40 0.00 0.00 3.18
3038 3176 5.345202 GCGGGATACTATAGTTCATTTGACG 59.655 44.000 11.40 6.87 0.00 4.35
3039 3177 6.444633 CGGGATACTATAGTTCATTTGACGT 58.555 40.000 11.40 0.00 0.00 4.34
3040 3178 6.362551 CGGGATACTATAGTTCATTTGACGTG 59.637 42.308 11.40 0.00 0.00 4.49
3041 3179 7.208080 GGGATACTATAGTTCATTTGACGTGT 58.792 38.462 11.40 0.00 0.00 4.49
3042 3180 7.169308 GGGATACTATAGTTCATTTGACGTGTG 59.831 40.741 11.40 0.00 0.00 3.82
3043 3181 7.169308 GGATACTATAGTTCATTTGACGTGTGG 59.831 40.741 11.40 0.00 0.00 4.17
3044 3182 6.032956 ACTATAGTTCATTTGACGTGTGGA 57.967 37.500 0.00 0.00 0.00 4.02
3045 3183 6.100004 ACTATAGTTCATTTGACGTGTGGAG 58.900 40.000 0.00 0.00 0.00 3.86
3046 3184 3.194005 AGTTCATTTGACGTGTGGAGT 57.806 42.857 0.00 0.00 0.00 3.85
3047 3185 3.541632 AGTTCATTTGACGTGTGGAGTT 58.458 40.909 0.00 0.00 0.00 3.01
3048 3186 3.945285 AGTTCATTTGACGTGTGGAGTTT 59.055 39.130 0.00 0.00 0.00 2.66
3049 3187 3.961477 TCATTTGACGTGTGGAGTTTG 57.039 42.857 0.00 0.00 0.00 2.93
3050 3188 2.616376 TCATTTGACGTGTGGAGTTTGG 59.384 45.455 0.00 0.00 0.00 3.28
3051 3189 0.736053 TTTGACGTGTGGAGTTTGGC 59.264 50.000 0.00 0.00 0.00 4.52
3052 3190 1.098712 TTGACGTGTGGAGTTTGGCC 61.099 55.000 0.00 0.00 0.00 5.36
3053 3191 2.590575 ACGTGTGGAGTTTGGCCG 60.591 61.111 0.00 0.00 0.00 6.13
3054 3192 2.280524 CGTGTGGAGTTTGGCCGA 60.281 61.111 0.00 0.00 0.00 5.54
3055 3193 2.317609 CGTGTGGAGTTTGGCCGAG 61.318 63.158 0.00 0.00 0.00 4.63
3056 3194 1.227853 GTGTGGAGTTTGGCCGAGT 60.228 57.895 0.00 0.00 0.00 4.18
3057 3195 1.227823 TGTGGAGTTTGGCCGAGTG 60.228 57.895 0.00 0.00 0.00 3.51
3058 3196 1.227853 GTGGAGTTTGGCCGAGTGT 60.228 57.895 0.00 0.00 0.00 3.55
3059 3197 0.818040 GTGGAGTTTGGCCGAGTGTT 60.818 55.000 0.00 0.00 0.00 3.32
3060 3198 0.817634 TGGAGTTTGGCCGAGTGTTG 60.818 55.000 0.00 0.00 0.00 3.33
3061 3199 0.534203 GGAGTTTGGCCGAGTGTTGA 60.534 55.000 0.00 0.00 0.00 3.18
3062 3200 1.523758 GAGTTTGGCCGAGTGTTGAT 58.476 50.000 0.00 0.00 0.00 2.57
3063 3201 1.880027 GAGTTTGGCCGAGTGTTGATT 59.120 47.619 0.00 0.00 0.00 2.57
3064 3202 1.880027 AGTTTGGCCGAGTGTTGATTC 59.120 47.619 0.00 0.00 0.00 2.52
3065 3203 1.606668 GTTTGGCCGAGTGTTGATTCA 59.393 47.619 0.00 0.00 0.00 2.57
3066 3204 1.234821 TTGGCCGAGTGTTGATTCAC 58.765 50.000 0.00 0.00 38.46 3.18
3067 3205 0.107643 TGGCCGAGTGTTGATTCACA 59.892 50.000 0.00 0.00 40.37 3.58
3068 3206 1.271325 TGGCCGAGTGTTGATTCACAT 60.271 47.619 0.00 0.00 40.37 3.21
3069 3207 1.812571 GGCCGAGTGTTGATTCACATT 59.187 47.619 0.00 0.00 40.37 2.71
3070 3208 3.006940 GGCCGAGTGTTGATTCACATTA 58.993 45.455 0.00 0.00 40.37 1.90
3071 3209 3.181510 GGCCGAGTGTTGATTCACATTAC 60.182 47.826 0.00 0.00 40.37 1.89
3072 3210 3.483574 GCCGAGTGTTGATTCACATTACG 60.484 47.826 0.00 0.00 40.37 3.18
3073 3211 3.678072 CCGAGTGTTGATTCACATTACGT 59.322 43.478 0.00 0.00 40.37 3.57
3087 3225 5.862924 ACATTACGTGACTCATGGAAAAG 57.137 39.130 0.00 0.00 26.15 2.27
3088 3226 4.695455 ACATTACGTGACTCATGGAAAAGG 59.305 41.667 0.00 0.00 26.15 3.11
3089 3227 4.610605 TTACGTGACTCATGGAAAAGGA 57.389 40.909 0.00 0.00 0.00 3.36
3090 3228 3.703001 ACGTGACTCATGGAAAAGGAT 57.297 42.857 3.28 0.00 0.00 3.24
3091 3229 3.338249 ACGTGACTCATGGAAAAGGATG 58.662 45.455 3.28 0.00 0.00 3.51
3092 3230 3.007940 ACGTGACTCATGGAAAAGGATGA 59.992 43.478 3.28 0.00 0.00 2.92
3093 3231 4.002982 CGTGACTCATGGAAAAGGATGAA 58.997 43.478 0.00 0.00 0.00 2.57
3094 3232 4.093998 CGTGACTCATGGAAAAGGATGAAG 59.906 45.833 0.00 0.00 0.00 3.02
3095 3233 4.012374 TGACTCATGGAAAAGGATGAAGC 58.988 43.478 0.00 0.00 0.00 3.86
3096 3234 3.359950 ACTCATGGAAAAGGATGAAGCC 58.640 45.455 0.00 0.00 0.00 4.35
3097 3235 2.692041 CTCATGGAAAAGGATGAAGCCC 59.308 50.000 0.00 0.00 0.00 5.19
3098 3236 1.758862 CATGGAAAAGGATGAAGCCCC 59.241 52.381 0.00 0.00 0.00 5.80
3099 3237 0.783206 TGGAAAAGGATGAAGCCCCA 59.217 50.000 0.00 0.00 0.00 4.96
3100 3238 1.148867 TGGAAAAGGATGAAGCCCCAA 59.851 47.619 0.00 0.00 0.00 4.12
3101 3239 1.827344 GGAAAAGGATGAAGCCCCAAG 59.173 52.381 0.00 0.00 0.00 3.61
3102 3240 2.529632 GAAAAGGATGAAGCCCCAAGT 58.470 47.619 0.00 0.00 0.00 3.16
3103 3241 3.563479 GGAAAAGGATGAAGCCCCAAGTA 60.563 47.826 0.00 0.00 0.00 2.24
3104 3242 3.825908 AAAGGATGAAGCCCCAAGTAA 57.174 42.857 0.00 0.00 0.00 2.24
3105 3243 2.808906 AGGATGAAGCCCCAAGTAAC 57.191 50.000 0.00 0.00 0.00 2.50
3106 3244 1.992557 AGGATGAAGCCCCAAGTAACA 59.007 47.619 0.00 0.00 0.00 2.41
3107 3245 2.582636 AGGATGAAGCCCCAAGTAACAT 59.417 45.455 0.00 0.00 0.00 2.71
3108 3246 3.785887 AGGATGAAGCCCCAAGTAACATA 59.214 43.478 0.00 0.00 0.00 2.29
3109 3247 4.416848 AGGATGAAGCCCCAAGTAACATAT 59.583 41.667 0.00 0.00 0.00 1.78
3110 3248 5.103515 AGGATGAAGCCCCAAGTAACATATT 60.104 40.000 0.00 0.00 0.00 1.28
3111 3249 5.010012 GGATGAAGCCCCAAGTAACATATTG 59.990 44.000 0.00 0.00 0.00 1.90
3112 3250 4.929479 TGAAGCCCCAAGTAACATATTGT 58.071 39.130 0.00 0.00 0.00 2.71
3113 3251 5.329399 TGAAGCCCCAAGTAACATATTGTT 58.671 37.500 0.00 0.00 43.88 2.83
3114 3252 5.777732 TGAAGCCCCAAGTAACATATTGTTT 59.222 36.000 0.00 0.00 41.45 2.83
3115 3253 6.948886 TGAAGCCCCAAGTAACATATTGTTTA 59.051 34.615 0.00 0.00 41.45 2.01
3116 3254 6.769134 AGCCCCAAGTAACATATTGTTTAC 57.231 37.500 0.00 0.00 41.45 2.01
3117 3255 6.490492 AGCCCCAAGTAACATATTGTTTACT 58.510 36.000 0.00 0.00 41.45 2.24
3118 3256 6.951778 AGCCCCAAGTAACATATTGTTTACTT 59.048 34.615 0.00 7.59 41.45 2.24
3119 3257 7.122204 AGCCCCAAGTAACATATTGTTTACTTC 59.878 37.037 9.48 2.63 41.45 3.01
3120 3258 7.094118 GCCCCAAGTAACATATTGTTTACTTCA 60.094 37.037 9.48 0.00 41.45 3.02
3121 3259 8.798402 CCCCAAGTAACATATTGTTTACTTCAA 58.202 33.333 9.48 0.00 41.45 2.69
3171 3309 9.822185 AATCTAACAAATTTCAATAGGGCATTC 57.178 29.630 0.00 0.00 0.00 2.67
3172 3310 7.781056 TCTAACAAATTTCAATAGGGCATTCC 58.219 34.615 0.00 0.00 0.00 3.01
3173 3311 6.371595 AACAAATTTCAATAGGGCATTCCA 57.628 33.333 0.00 0.00 38.24 3.53
3174 3312 6.564557 ACAAATTTCAATAGGGCATTCCAT 57.435 33.333 0.00 0.00 38.24 3.41
3175 3313 6.585416 ACAAATTTCAATAGGGCATTCCATC 58.415 36.000 0.00 0.00 38.24 3.51
3176 3314 6.156602 ACAAATTTCAATAGGGCATTCCATCA 59.843 34.615 0.00 0.00 38.24 3.07
3177 3315 7.147444 ACAAATTTCAATAGGGCATTCCATCAT 60.147 33.333 0.00 0.00 38.24 2.45
3178 3316 8.369424 CAAATTTCAATAGGGCATTCCATCATA 58.631 33.333 0.00 0.00 38.24 2.15
3179 3317 8.495160 AATTTCAATAGGGCATTCCATCATAA 57.505 30.769 0.00 0.00 38.24 1.90
3180 3318 7.528996 TTTCAATAGGGCATTCCATCATAAG 57.471 36.000 0.00 0.00 38.24 1.73
3181 3319 6.452757 TCAATAGGGCATTCCATCATAAGA 57.547 37.500 0.00 0.00 38.24 2.10
3182 3320 7.036154 TCAATAGGGCATTCCATCATAAGAT 57.964 36.000 0.00 0.00 38.24 2.40
3183 3321 8.161640 TCAATAGGGCATTCCATCATAAGATA 57.838 34.615 0.00 0.00 38.24 1.98
3184 3322 8.270030 TCAATAGGGCATTCCATCATAAGATAG 58.730 37.037 0.00 0.00 38.24 2.08
3185 3323 4.853007 AGGGCATTCCATCATAAGATAGC 58.147 43.478 0.00 0.00 38.24 2.97
3186 3324 4.539293 AGGGCATTCCATCATAAGATAGCT 59.461 41.667 0.00 0.00 38.24 3.32
3187 3325 4.639310 GGGCATTCCATCATAAGATAGCTG 59.361 45.833 0.00 0.00 31.88 4.24
3188 3326 4.096081 GGCATTCCATCATAAGATAGCTGC 59.904 45.833 0.00 0.00 31.88 5.25
3189 3327 4.698780 GCATTCCATCATAAGATAGCTGCA 59.301 41.667 1.02 0.00 31.88 4.41
3190 3328 5.163744 GCATTCCATCATAAGATAGCTGCAG 60.164 44.000 10.11 10.11 31.88 4.41
3191 3329 4.548451 TCCATCATAAGATAGCTGCAGG 57.452 45.455 17.12 0.00 31.88 4.85
3192 3330 3.008330 CCATCATAAGATAGCTGCAGGC 58.992 50.000 17.12 7.98 34.88 4.85
3193 3331 2.847327 TCATAAGATAGCTGCAGGCC 57.153 50.000 17.12 0.00 43.05 5.19
3194 3332 2.333069 TCATAAGATAGCTGCAGGCCT 58.667 47.619 17.12 0.00 43.05 5.19
3195 3333 2.707791 TCATAAGATAGCTGCAGGCCTT 59.292 45.455 17.12 9.06 43.05 4.35
3196 3334 2.918712 TAAGATAGCTGCAGGCCTTC 57.081 50.000 17.12 0.00 43.05 3.46
3197 3335 0.914644 AAGATAGCTGCAGGCCTTCA 59.085 50.000 17.12 2.60 43.05 3.02
3198 3336 0.469070 AGATAGCTGCAGGCCTTCAG 59.531 55.000 26.17 26.17 43.05 3.02
3199 3337 0.534652 GATAGCTGCAGGCCTTCAGG 60.535 60.000 30.07 14.46 43.05 3.86
3200 3338 1.277580 ATAGCTGCAGGCCTTCAGGT 61.278 55.000 33.93 33.93 42.76 4.00
3201 3339 1.903877 TAGCTGCAGGCCTTCAGGTC 61.904 60.000 35.19 19.10 40.87 3.85
3202 3340 2.752358 CTGCAGGCCTTCAGGTCA 59.248 61.111 23.31 4.91 43.78 4.02
3203 3341 1.376942 CTGCAGGCCTTCAGGTCAG 60.377 63.158 23.31 10.34 43.78 3.51
3204 3342 2.045536 GCAGGCCTTCAGGTCAGG 60.046 66.667 0.00 0.00 43.78 3.86
3205 3343 2.673523 CAGGCCTTCAGGTCAGGG 59.326 66.667 0.00 0.00 43.78 4.45
3206 3344 2.612115 AGGCCTTCAGGTCAGGGG 60.612 66.667 0.00 0.00 43.78 4.79
3207 3345 4.432741 GGCCTTCAGGTCAGGGGC 62.433 72.222 0.00 0.00 40.23 5.80
3208 3346 3.650950 GCCTTCAGGTCAGGGGCA 61.651 66.667 0.00 0.00 42.08 5.36
3209 3347 2.352805 CCTTCAGGTCAGGGGCAC 59.647 66.667 0.00 0.00 0.00 5.01
3210 3348 2.528818 CCTTCAGGTCAGGGGCACA 61.529 63.158 0.00 0.00 0.00 4.57
3211 3349 1.455849 CTTCAGGTCAGGGGCACAA 59.544 57.895 0.00 0.00 0.00 3.33
3212 3350 0.038744 CTTCAGGTCAGGGGCACAAT 59.961 55.000 0.00 0.00 0.00 2.71
3213 3351 0.482446 TTCAGGTCAGGGGCACAATT 59.518 50.000 0.00 0.00 0.00 2.32
3214 3352 0.482446 TCAGGTCAGGGGCACAATTT 59.518 50.000 0.00 0.00 0.00 1.82
3215 3353 1.133199 TCAGGTCAGGGGCACAATTTT 60.133 47.619 0.00 0.00 0.00 1.82
3216 3354 1.693606 CAGGTCAGGGGCACAATTTTT 59.306 47.619 0.00 0.00 0.00 1.94
3262 3400 9.251440 ACTATTAACTTGTCCTGTACACTATGA 57.749 33.333 0.00 0.00 38.00 2.15
3265 3403 9.959721 ATTAACTTGTCCTGTACACTATGATTT 57.040 29.630 0.00 0.00 38.00 2.17
3266 3404 7.907214 AACTTGTCCTGTACACTATGATTTC 57.093 36.000 0.00 0.00 38.00 2.17
3267 3405 7.246171 ACTTGTCCTGTACACTATGATTTCT 57.754 36.000 0.00 0.00 38.00 2.52
3268 3406 7.324178 ACTTGTCCTGTACACTATGATTTCTC 58.676 38.462 0.00 0.00 38.00 2.87
3269 3407 6.850752 TGTCCTGTACACTATGATTTCTCA 57.149 37.500 0.00 0.00 31.43 3.27
3270 3408 7.423844 TGTCCTGTACACTATGATTTCTCAT 57.576 36.000 0.00 0.00 38.28 2.90
3271 3409 8.533569 TGTCCTGTACACTATGATTTCTCATA 57.466 34.615 0.00 0.00 36.94 2.15
3272 3410 9.147732 TGTCCTGTACACTATGATTTCTCATAT 57.852 33.333 0.00 0.00 37.17 1.78
3273 3411 9.416794 GTCCTGTACACTATGATTTCTCATATG 57.583 37.037 0.00 0.00 42.17 1.78
3274 3412 8.090831 TCCTGTACACTATGATTTCTCATATGC 58.909 37.037 0.00 0.00 42.17 3.14
3275 3413 7.874528 CCTGTACACTATGATTTCTCATATGCA 59.125 37.037 0.00 0.00 42.17 3.96
3276 3414 9.433153 CTGTACACTATGATTTCTCATATGCAT 57.567 33.333 3.79 3.79 42.17 3.96
3277 3415 9.783081 TGTACACTATGATTTCTCATATGCATT 57.217 29.630 3.54 0.00 42.17 3.56
3280 3418 8.944029 ACACTATGATTTCTCATATGCATTAGC 58.056 33.333 3.54 0.00 42.17 3.09
3281 3419 8.114905 CACTATGATTTCTCATATGCATTAGCG 58.885 37.037 3.54 0.00 42.17 4.26
3282 3420 7.821359 ACTATGATTTCTCATATGCATTAGCGT 59.179 33.333 3.54 0.00 42.17 5.07
3283 3421 6.866010 TGATTTCTCATATGCATTAGCGTT 57.134 33.333 3.54 0.00 46.23 4.84
3284 3422 7.961325 TGATTTCTCATATGCATTAGCGTTA 57.039 32.000 3.54 0.00 46.23 3.18
3285 3423 8.376889 TGATTTCTCATATGCATTAGCGTTAA 57.623 30.769 3.54 0.00 46.23 2.01
3286 3424 8.282592 TGATTTCTCATATGCATTAGCGTTAAC 58.717 33.333 3.54 0.00 46.23 2.01
3287 3425 6.539649 TTCTCATATGCATTAGCGTTAACC 57.460 37.500 3.54 0.00 46.23 2.85
3288 3426 4.994852 TCTCATATGCATTAGCGTTAACCC 59.005 41.667 3.54 0.00 46.23 4.11
3289 3427 4.069304 TCATATGCATTAGCGTTAACCCC 58.931 43.478 3.54 0.00 46.23 4.95
3290 3428 1.687563 ATGCATTAGCGTTAACCCCC 58.312 50.000 0.00 0.00 46.23 5.40
3291 3429 0.328592 TGCATTAGCGTTAACCCCCA 59.671 50.000 0.00 0.00 46.23 4.96
3292 3430 1.064314 TGCATTAGCGTTAACCCCCAT 60.064 47.619 0.00 0.00 46.23 4.00
3293 3431 1.607148 GCATTAGCGTTAACCCCCATC 59.393 52.381 0.00 0.00 0.00 3.51
3294 3432 2.925724 CATTAGCGTTAACCCCCATCA 58.074 47.619 0.00 0.00 0.00 3.07
3295 3433 3.486383 CATTAGCGTTAACCCCCATCAT 58.514 45.455 0.00 0.00 0.00 2.45
3296 3434 3.655615 TTAGCGTTAACCCCCATCATT 57.344 42.857 0.00 0.00 0.00 2.57
3297 3435 2.052782 AGCGTTAACCCCCATCATTC 57.947 50.000 0.00 0.00 0.00 2.67
3298 3436 1.283613 AGCGTTAACCCCCATCATTCA 59.716 47.619 0.00 0.00 0.00 2.57
3299 3437 2.096248 GCGTTAACCCCCATCATTCAA 58.904 47.619 0.00 0.00 0.00 2.69
3300 3438 2.099098 GCGTTAACCCCCATCATTCAAG 59.901 50.000 0.00 0.00 0.00 3.02
3301 3439 3.616219 CGTTAACCCCCATCATTCAAGA 58.384 45.455 0.00 0.00 0.00 3.02
3302 3440 4.013728 CGTTAACCCCCATCATTCAAGAA 58.986 43.478 0.00 0.00 0.00 2.52
3303 3441 4.461081 CGTTAACCCCCATCATTCAAGAAA 59.539 41.667 0.00 0.00 0.00 2.52
3304 3442 5.047660 CGTTAACCCCCATCATTCAAGAAAA 60.048 40.000 0.00 0.00 0.00 2.29
3305 3443 4.890158 AACCCCCATCATTCAAGAAAAC 57.110 40.909 0.00 0.00 0.00 2.43
3306 3444 4.132122 ACCCCCATCATTCAAGAAAACT 57.868 40.909 0.00 0.00 0.00 2.66
3307 3445 3.834231 ACCCCCATCATTCAAGAAAACTG 59.166 43.478 0.00 0.00 0.00 3.16
3308 3446 3.834231 CCCCCATCATTCAAGAAAACTGT 59.166 43.478 0.00 0.00 0.00 3.55
3309 3447 4.322198 CCCCCATCATTCAAGAAAACTGTG 60.322 45.833 0.00 0.00 0.00 3.66
3310 3448 4.240096 CCCATCATTCAAGAAAACTGTGC 58.760 43.478 0.00 0.00 0.00 4.57
3311 3449 4.262121 CCCATCATTCAAGAAAACTGTGCA 60.262 41.667 0.00 0.00 0.00 4.57
3312 3450 5.291178 CCATCATTCAAGAAAACTGTGCAA 58.709 37.500 0.00 0.00 0.00 4.08
3313 3451 5.754406 CCATCATTCAAGAAAACTGTGCAAA 59.246 36.000 0.00 0.00 0.00 3.68
3314 3452 6.258287 CCATCATTCAAGAAAACTGTGCAAAA 59.742 34.615 0.00 0.00 0.00 2.44
3315 3453 7.201626 CCATCATTCAAGAAAACTGTGCAAAAA 60.202 33.333 0.00 0.00 0.00 1.94
3316 3454 7.059448 TCATTCAAGAAAACTGTGCAAAAAC 57.941 32.000 0.00 0.00 0.00 2.43
3317 3455 6.873076 TCATTCAAGAAAACTGTGCAAAAACT 59.127 30.769 0.00 0.00 0.00 2.66
3318 3456 8.031864 TCATTCAAGAAAACTGTGCAAAAACTA 58.968 29.630 0.00 0.00 0.00 2.24
3319 3457 7.575332 TTCAAGAAAACTGTGCAAAAACTAC 57.425 32.000 0.00 0.00 0.00 2.73
3320 3458 6.096695 TCAAGAAAACTGTGCAAAAACTACC 58.903 36.000 0.00 0.00 0.00 3.18
3321 3459 5.006153 AGAAAACTGTGCAAAAACTACCC 57.994 39.130 0.00 0.00 0.00 3.69
3322 3460 4.464597 AGAAAACTGTGCAAAAACTACCCA 59.535 37.500 0.00 0.00 0.00 4.51
3323 3461 4.810191 AAACTGTGCAAAAACTACCCAA 57.190 36.364 0.00 0.00 0.00 4.12
3324 3462 5.351948 AAACTGTGCAAAAACTACCCAAT 57.648 34.783 0.00 0.00 0.00 3.16
3325 3463 5.351948 AACTGTGCAAAAACTACCCAATT 57.648 34.783 0.00 0.00 0.00 2.32
3326 3464 4.692228 ACTGTGCAAAAACTACCCAATTG 58.308 39.130 0.00 0.00 0.00 2.32
3327 3465 4.057432 CTGTGCAAAAACTACCCAATTGG 58.943 43.478 18.21 18.21 41.37 3.16
3328 3466 3.706594 TGTGCAAAAACTACCCAATTGGA 59.293 39.130 26.60 5.83 37.39 3.53
3329 3467 4.055360 GTGCAAAAACTACCCAATTGGAC 58.945 43.478 26.60 7.39 35.68 4.02
3330 3468 3.706594 TGCAAAAACTACCCAATTGGACA 59.293 39.130 26.60 11.61 37.39 4.02
3331 3469 4.162320 TGCAAAAACTACCCAATTGGACAA 59.838 37.500 26.60 9.42 37.39 3.18
3332 3470 5.163258 TGCAAAAACTACCCAATTGGACAAT 60.163 36.000 26.60 10.50 37.39 2.71
3333 3471 5.179182 GCAAAAACTACCCAATTGGACAATG 59.821 40.000 26.60 10.99 37.39 2.82
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
71 72 0.243636 GTGTGGAGCCAATTTTCCCG 59.756 55.000 0.00 0.00 32.29 5.14
75 76 0.827507 AGCCGTGTGGAGCCAATTTT 60.828 50.000 0.00 0.00 37.49 1.82
79 80 4.641645 CCAGCCGTGTGGAGCCAA 62.642 66.667 0.00 0.00 40.44 4.52
101 102 1.666234 GAGATCTTGGGCGATCGGC 60.666 63.158 31.57 31.57 43.52 5.54
209 211 2.735134 CAAGGTTCACTTACCGTAGCAC 59.265 50.000 0.00 0.00 43.21 4.40
214 216 2.616842 CAAAGCAAGGTTCACTTACCGT 59.383 45.455 0.00 0.00 43.21 4.83
217 219 2.288213 GGCCAAAGCAAGGTTCACTTAC 60.288 50.000 0.00 0.00 42.56 2.34
340 353 1.060553 CGTTACACACGCATCATCACC 59.939 52.381 0.00 0.00 43.37 4.02
341 354 2.419565 CGTTACACACGCATCATCAC 57.580 50.000 0.00 0.00 43.37 3.06
359 375 6.310197 AGTAAGTACGACTTAACTAGCAACG 58.690 40.000 8.43 0.00 41.80 4.10
371 387 2.996631 ACGGATGGAGTAAGTACGACT 58.003 47.619 3.41 3.41 0.00 4.18
395 411 5.061311 TCCGTTCAATTTCGACGAGTAAATC 59.939 40.000 0.00 0.00 38.99 2.17
396 412 4.925054 TCCGTTCAATTTCGACGAGTAAAT 59.075 37.500 0.00 0.00 38.99 1.40
397 413 4.297510 TCCGTTCAATTTCGACGAGTAAA 58.702 39.130 0.00 0.00 38.99 2.01
398 414 3.899734 TCCGTTCAATTTCGACGAGTAA 58.100 40.909 0.00 0.00 38.99 2.24
399 415 3.557577 TCCGTTCAATTTCGACGAGTA 57.442 42.857 0.00 0.00 38.99 2.59
400 416 2.427232 TCCGTTCAATTTCGACGAGT 57.573 45.000 0.00 0.00 38.99 4.18
401 417 2.729882 ACTTCCGTTCAATTTCGACGAG 59.270 45.455 0.00 0.00 38.99 4.18
402 418 2.746269 ACTTCCGTTCAATTTCGACGA 58.254 42.857 0.00 0.00 38.99 4.20
403 419 4.835199 ATACTTCCGTTCAATTTCGACG 57.165 40.909 0.00 0.00 36.61 5.12
411 427 9.358406 TCACCTCTTATATATACTTCCGTTCAA 57.642 33.333 0.00 0.00 0.00 2.69
412 428 8.929260 TCACCTCTTATATATACTTCCGTTCA 57.071 34.615 0.00 0.00 0.00 3.18
413 429 9.228949 TCTCACCTCTTATATATACTTCCGTTC 57.771 37.037 0.00 0.00 0.00 3.95
414 430 9.233649 CTCTCACCTCTTATATATACTTCCGTT 57.766 37.037 0.00 0.00 0.00 4.44
415 431 7.337436 GCTCTCACCTCTTATATATACTTCCGT 59.663 40.741 0.00 0.00 0.00 4.69
416 432 7.201750 GGCTCTCACCTCTTATATATACTTCCG 60.202 44.444 0.00 0.00 0.00 4.30
417 433 7.616150 TGGCTCTCACCTCTTATATATACTTCC 59.384 40.741 0.00 0.00 0.00 3.46
418 434 8.582657 TGGCTCTCACCTCTTATATATACTTC 57.417 38.462 0.00 0.00 0.00 3.01
419 435 9.554053 AATGGCTCTCACCTCTTATATATACTT 57.446 33.333 0.00 0.00 0.00 2.24
420 436 8.976353 CAATGGCTCTCACCTCTTATATATACT 58.024 37.037 0.00 0.00 0.00 2.12
421 437 7.708752 GCAATGGCTCTCACCTCTTATATATAC 59.291 40.741 0.00 0.00 36.96 1.47
422 438 7.147655 GGCAATGGCTCTCACCTCTTATATATA 60.148 40.741 0.00 0.00 40.87 0.86
423 439 6.352565 GGCAATGGCTCTCACCTCTTATATAT 60.353 42.308 0.00 0.00 40.87 0.86
424 440 5.046304 GGCAATGGCTCTCACCTCTTATATA 60.046 44.000 0.00 0.00 40.87 0.86
425 441 4.263243 GGCAATGGCTCTCACCTCTTATAT 60.263 45.833 0.00 0.00 40.87 0.86
429 445 0.034670 GGCAATGGCTCTCACCTCTT 60.035 55.000 0.00 0.00 40.87 2.85
446 462 0.671781 ATCAACAGACAGCGACAGGC 60.672 55.000 0.00 0.00 44.05 4.85
492 508 7.933577 TGATTTGACTGAACTGGATGGATATAC 59.066 37.037 0.00 0.00 0.00 1.47
548 575 3.162147 TCAGAGCTCCAGAAGTACACT 57.838 47.619 10.93 0.00 0.00 3.55
560 587 0.606673 GTTGGGTGGGTTCAGAGCTC 60.607 60.000 5.27 5.27 0.00 4.09
563 590 1.609208 CAAGTTGGGTGGGTTCAGAG 58.391 55.000 0.00 0.00 0.00 3.35
649 689 4.212716 TCCTCTAATTAAGCTGAGCGGTA 58.787 43.478 0.00 0.00 0.00 4.02
666 706 2.831526 GCAACTCTCTTTCTCCTCCTCT 59.168 50.000 0.00 0.00 0.00 3.69
671 711 2.038295 CACCTGCAACTCTCTTTCTCCT 59.962 50.000 0.00 0.00 0.00 3.69
718 758 2.495669 GAGATACTATGAGCCTCCTGCC 59.504 54.545 0.00 0.00 42.71 4.85
771 845 6.533012 CACAGAAGTAACATGTACCTGATGAG 59.467 42.308 0.00 0.00 0.00 2.90
843 922 1.615384 GGACCAGAAAAGGCAGATGCT 60.615 52.381 4.59 0.00 41.70 3.79
848 927 2.030805 CGAAAAGGACCAGAAAAGGCAG 60.031 50.000 0.00 0.00 0.00 4.85
849 928 1.953686 CGAAAAGGACCAGAAAAGGCA 59.046 47.619 0.00 0.00 0.00 4.75
850 929 2.227194 TCGAAAAGGACCAGAAAAGGC 58.773 47.619 0.00 0.00 0.00 4.35
851 930 4.911514 TTTCGAAAAGGACCAGAAAAGG 57.088 40.909 8.44 0.00 0.00 3.11
872 951 5.600069 AGACCAGAAAAGGCAGATTCTTTTT 59.400 36.000 0.00 0.00 42.40 1.94
873 952 5.143369 AGACCAGAAAAGGCAGATTCTTTT 58.857 37.500 0.00 0.00 44.25 2.27
874 953 4.734266 AGACCAGAAAAGGCAGATTCTTT 58.266 39.130 0.00 0.00 33.73 2.52
875 954 4.379302 AGACCAGAAAAGGCAGATTCTT 57.621 40.909 0.00 0.00 33.73 2.52
876 955 4.379302 AAGACCAGAAAAGGCAGATTCT 57.621 40.909 0.00 0.00 36.35 2.40
877 956 4.764308 AGAAAGACCAGAAAAGGCAGATTC 59.236 41.667 0.00 0.00 0.00 2.52
878 957 4.734266 AGAAAGACCAGAAAAGGCAGATT 58.266 39.130 0.00 0.00 0.00 2.40
879 958 4.379302 AGAAAGACCAGAAAAGGCAGAT 57.621 40.909 0.00 0.00 0.00 2.90
880 959 3.864789 AGAAAGACCAGAAAAGGCAGA 57.135 42.857 0.00 0.00 0.00 4.26
987 1066 4.642429 ACTGGTTCATTGTTCCTCAGTAC 58.358 43.478 0.00 0.00 33.00 2.73
1014 1093 2.989639 CCGGTCCAATCTGCAGGA 59.010 61.111 15.13 0.04 0.00 3.86
1017 1096 1.971167 GTTGCCGGTCCAATCTGCA 60.971 57.895 1.90 0.00 0.00 4.41
1072 1151 2.135933 GAAGATGAATCCGGCGGTTAG 58.864 52.381 27.32 0.00 0.00 2.34
1074 1153 0.541863 AGAAGATGAATCCGGCGGTT 59.458 50.000 27.32 18.99 0.00 4.44
1094 1173 1.331756 CATCGGCCGATCCAAGAAAAG 59.668 52.381 37.10 18.91 31.62 2.27
1120 1211 3.698040 GCCACATGGAAGAATCAGTCATT 59.302 43.478 0.87 0.00 37.39 2.57
1134 1233 2.256158 CAGCAACACGCCACATGG 59.744 61.111 0.00 0.00 44.04 3.66
1156 1255 4.117661 GAGGCCGTCGTCTTCGCT 62.118 66.667 0.00 0.00 36.96 4.93
1276 1375 2.058798 GCAGTTGTCTTCATCGACGAA 58.941 47.619 0.00 0.00 36.71 3.85
1291 1390 2.344203 CCCTCTCGACCGAGCAGTT 61.344 63.158 14.00 0.00 41.71 3.16
1295 1394 3.519930 GGTCCCTCTCGACCGAGC 61.520 72.222 14.00 0.66 42.88 5.03
1440 1539 2.668632 CCTGCTTTACCCGCCAGA 59.331 61.111 0.00 0.00 0.00 3.86
1444 1543 2.989881 GCAACCCTGCTTTACCCGC 61.990 63.158 0.00 0.00 45.74 6.13
1481 1580 2.493973 CCTCTGAGACAGGCGAGC 59.506 66.667 6.17 0.00 31.51 5.03
1490 1589 4.742649 ACTCGCCGGCCTCTGAGA 62.743 66.667 28.76 15.99 32.81 3.27
1491 1590 4.200283 GACTCGCCGGCCTCTGAG 62.200 72.222 23.46 23.02 34.65 3.35
1655 1760 3.547249 GAGGTCAACGTCGCCGACA 62.547 63.158 18.40 0.00 37.88 4.35
1698 1803 4.577677 TTCCGCTTGCTGGTGCCA 62.578 61.111 0.00 0.00 38.71 4.92
1727 1832 0.911769 CTGCATAACCTCACTGGGGA 59.088 55.000 0.42 0.00 41.11 4.81
1790 1895 3.876589 TTGGCTGTCGTCGGCTTCC 62.877 63.158 13.12 0.00 44.62 3.46
1857 1962 8.838452 AACTCGAAGTAAGACGAATGTATTAG 57.162 34.615 0.00 0.00 38.05 1.73
1864 1969 5.162075 CAGGAAACTCGAAGTAAGACGAAT 58.838 41.667 0.00 0.00 40.21 3.34
1887 1992 1.303643 CCAAGAGGCCCAAGTGTCC 60.304 63.158 0.00 0.00 0.00 4.02
1898 2003 3.830192 GCAATGGCGGCCAAGAGG 61.830 66.667 27.70 16.01 36.95 3.69
1921 2038 0.097674 GCATCCATCACGCAGAACAC 59.902 55.000 0.00 0.00 0.00 3.32
2021 2140 2.187946 CGAAGCTGCGGAGGGATT 59.812 61.111 6.07 0.00 0.00 3.01
2041 2160 3.302092 CGTATTCGTAACGACTAGCGAGT 60.302 47.826 12.46 0.00 42.90 4.18
2042 2161 3.060940 TCGTATTCGTAACGACTAGCGAG 60.061 47.826 12.46 0.00 43.90 5.03
2043 2162 2.857748 TCGTATTCGTAACGACTAGCGA 59.142 45.455 12.46 0.00 43.90 4.93
2044 2163 3.224606 TCGTATTCGTAACGACTAGCG 57.775 47.619 5.74 5.24 43.90 4.26
2096 2223 2.863137 GCCAAGAACGAGATGATCAGAC 59.137 50.000 0.09 0.00 0.00 3.51
2120 2247 2.742589 GTCCGTCTGGTGGAAGAATTTC 59.257 50.000 0.00 0.00 37.23 2.17
2121 2248 2.105821 TGTCCGTCTGGTGGAAGAATTT 59.894 45.455 0.00 0.00 37.23 1.82
2325 2452 3.808174 GGGTCATTTGAACTCTATACGCC 59.192 47.826 0.00 0.00 31.02 5.68
2333 2460 5.474876 ACTCAATTCTGGGTCATTTGAACTC 59.525 40.000 0.00 0.00 25.46 3.01
2442 2570 4.608948 AGGAGTAGGTTGACTTGTCAAG 57.391 45.455 15.44 11.17 0.00 3.02
2473 2601 4.048504 GTCAAAGCACGCCTTACATTTTT 58.951 39.130 0.00 0.00 32.20 1.94
2474 2602 3.317993 AGTCAAAGCACGCCTTACATTTT 59.682 39.130 0.00 0.00 32.20 1.82
2540 2668 9.107177 GTGAATCTGATGATAGTGATTCTTGTT 57.893 33.333 13.36 0.00 42.85 2.83
2541 2669 8.262933 TGTGAATCTGATGATAGTGATTCTTGT 58.737 33.333 13.36 0.00 42.85 3.16
2542 2670 8.658499 TGTGAATCTGATGATAGTGATTCTTG 57.342 34.615 13.36 0.00 42.85 3.02
2608 2736 9.683870 ACCATAAATTCCATGCACAATATTTTT 57.316 25.926 0.00 0.00 0.00 1.94
2624 2752 5.170748 CACTTGGGCTTTGACCATAAATTC 58.829 41.667 0.00 0.00 42.18 2.17
2665 2793 9.603921 AATAATACCATCAATTTGGAAAAGCAG 57.396 29.630 3.10 0.00 39.25 4.24
2743 2874 3.119566 ACCGAGATGAGTTTTAGACGGAC 60.120 47.826 0.00 0.00 41.30 4.79
2785 2918 9.198837 CAAAGTCTCATCTAGATCTGATCATTG 57.801 37.037 19.12 10.52 36.36 2.82
2841 2974 4.763793 AGATGGAAAATGAGACCACACAAG 59.236 41.667 0.00 0.00 36.49 3.16
2898 3036 8.105135 CACACCTACAACAAATAAAAACAAACG 58.895 33.333 0.00 0.00 0.00 3.60
2927 3065 7.492344 GATTACATCAATCCATGGGACAAAAAC 59.508 37.037 13.02 0.00 38.79 2.43
2928 3066 7.399765 AGATTACATCAATCCATGGGACAAAAA 59.600 33.333 13.02 0.00 43.06 1.94
2929 3067 6.896860 AGATTACATCAATCCATGGGACAAAA 59.103 34.615 13.02 0.00 43.06 2.44
2930 3068 6.434302 AGATTACATCAATCCATGGGACAAA 58.566 36.000 13.02 0.00 43.06 2.83
2931 3069 6.017211 AGATTACATCAATCCATGGGACAA 57.983 37.500 13.02 0.00 43.06 3.18
2932 3070 5.651612 AGATTACATCAATCCATGGGACA 57.348 39.130 13.02 0.00 43.63 4.02
2933 3071 6.966534 AAAGATTACATCAATCCATGGGAC 57.033 37.500 13.02 0.00 43.63 4.46
2934 3072 6.896860 ACAAAAGATTACATCAATCCATGGGA 59.103 34.615 13.02 1.10 43.63 4.37
2935 3073 7.069085 AGACAAAAGATTACATCAATCCATGGG 59.931 37.037 13.02 0.00 43.63 4.00
2936 3074 7.919091 CAGACAAAAGATTACATCAATCCATGG 59.081 37.037 4.97 4.97 43.63 3.66
2937 3075 8.464404 ACAGACAAAAGATTACATCAATCCATG 58.536 33.333 0.00 0.00 43.63 3.66
2938 3076 8.585471 ACAGACAAAAGATTACATCAATCCAT 57.415 30.769 0.00 0.00 43.63 3.41
2939 3077 8.408043 AACAGACAAAAGATTACATCAATCCA 57.592 30.769 0.00 0.00 43.63 3.41
2940 3078 7.970614 GGAACAGACAAAAGATTACATCAATCC 59.029 37.037 0.00 0.00 43.63 3.01
2941 3079 8.514594 TGGAACAGACAAAAGATTACATCAATC 58.485 33.333 0.00 0.00 43.02 2.67
2942 3080 8.408043 TGGAACAGACAAAAGATTACATCAAT 57.592 30.769 0.00 0.00 0.00 2.57
2943 3081 7.815840 TGGAACAGACAAAAGATTACATCAA 57.184 32.000 0.00 0.00 0.00 2.57
2962 3100 0.387565 ACGCAACAACCCAATGGAAC 59.612 50.000 0.00 0.00 34.81 3.62
2963 3101 1.115467 AACGCAACAACCCAATGGAA 58.885 45.000 0.00 0.00 34.81 3.53
2964 3102 1.115467 AAACGCAACAACCCAATGGA 58.885 45.000 0.00 0.00 34.81 3.41
2965 3103 1.946745 AAAACGCAACAACCCAATGG 58.053 45.000 0.00 0.00 37.80 3.16
2966 3104 5.665381 AATAAAAACGCAACAACCCAATG 57.335 34.783 0.00 0.00 0.00 2.82
2967 3105 6.517605 AGTAATAAAAACGCAACAACCCAAT 58.482 32.000 0.00 0.00 0.00 3.16
2968 3106 5.903810 AGTAATAAAAACGCAACAACCCAA 58.096 33.333 0.00 0.00 0.00 4.12
2969 3107 5.517322 AGTAATAAAAACGCAACAACCCA 57.483 34.783 0.00 0.00 0.00 4.51
2970 3108 6.671190 ACTAGTAATAAAAACGCAACAACCC 58.329 36.000 0.00 0.00 0.00 4.11
2971 3109 7.856894 TCAACTAGTAATAAAAACGCAACAACC 59.143 33.333 0.00 0.00 0.00 3.77
2972 3110 8.770850 TCAACTAGTAATAAAAACGCAACAAC 57.229 30.769 0.00 0.00 0.00 3.32
2973 3111 9.388346 CATCAACTAGTAATAAAAACGCAACAA 57.612 29.630 0.00 0.00 0.00 2.83
2974 3112 7.535940 GCATCAACTAGTAATAAAAACGCAACA 59.464 33.333 0.00 0.00 0.00 3.33
2975 3113 7.007995 GGCATCAACTAGTAATAAAAACGCAAC 59.992 37.037 0.00 0.00 0.00 4.17
2976 3114 7.024768 GGCATCAACTAGTAATAAAAACGCAA 58.975 34.615 0.00 0.00 0.00 4.85
2977 3115 6.403855 GGGCATCAACTAGTAATAAAAACGCA 60.404 38.462 0.00 0.00 0.00 5.24
2978 3116 5.969435 GGGCATCAACTAGTAATAAAAACGC 59.031 40.000 0.00 0.00 0.00 4.84
2979 3117 6.492254 GGGGCATCAACTAGTAATAAAAACG 58.508 40.000 0.00 0.00 0.00 3.60
2980 3118 6.492254 CGGGGCATCAACTAGTAATAAAAAC 58.508 40.000 0.00 0.00 0.00 2.43
2981 3119 5.066764 GCGGGGCATCAACTAGTAATAAAAA 59.933 40.000 0.00 0.00 0.00 1.94
2982 3120 4.577283 GCGGGGCATCAACTAGTAATAAAA 59.423 41.667 0.00 0.00 0.00 1.52
2983 3121 4.131596 GCGGGGCATCAACTAGTAATAAA 58.868 43.478 0.00 0.00 0.00 1.40
2984 3122 3.735591 GCGGGGCATCAACTAGTAATAA 58.264 45.455 0.00 0.00 0.00 1.40
2985 3123 2.288579 CGCGGGGCATCAACTAGTAATA 60.289 50.000 0.00 0.00 0.00 0.98
2986 3124 1.540363 CGCGGGGCATCAACTAGTAAT 60.540 52.381 0.00 0.00 0.00 1.89
2987 3125 0.179094 CGCGGGGCATCAACTAGTAA 60.179 55.000 0.00 0.00 0.00 2.24
2988 3126 1.440060 CGCGGGGCATCAACTAGTA 59.560 57.895 0.00 0.00 0.00 1.82
2989 3127 2.186903 CGCGGGGCATCAACTAGT 59.813 61.111 0.00 0.00 0.00 2.57
2990 3128 3.272334 GCGCGGGGCATCAACTAG 61.272 66.667 8.83 0.00 42.87 2.57
3006 3144 1.578583 ATAGTATCCCGCAACAACGC 58.421 50.000 0.00 0.00 0.00 4.84
3007 3145 3.973657 ACTATAGTATCCCGCAACAACG 58.026 45.455 2.75 0.00 0.00 4.10
3008 3146 5.353938 TGAACTATAGTATCCCGCAACAAC 58.646 41.667 5.65 0.00 0.00 3.32
3009 3147 5.601583 TGAACTATAGTATCCCGCAACAA 57.398 39.130 5.65 0.00 0.00 2.83
3010 3148 5.801531 ATGAACTATAGTATCCCGCAACA 57.198 39.130 5.65 0.00 0.00 3.33
3011 3149 6.704493 TCAAATGAACTATAGTATCCCGCAAC 59.296 38.462 5.65 0.00 0.00 4.17
3012 3150 6.704493 GTCAAATGAACTATAGTATCCCGCAA 59.296 38.462 5.65 0.00 0.00 4.85
3013 3151 6.220930 GTCAAATGAACTATAGTATCCCGCA 58.779 40.000 5.65 0.00 0.00 5.69
3014 3152 5.345202 CGTCAAATGAACTATAGTATCCCGC 59.655 44.000 5.65 0.00 0.00 6.13
3015 3153 6.362551 CACGTCAAATGAACTATAGTATCCCG 59.637 42.308 5.65 3.94 0.00 5.14
3016 3154 7.169308 CACACGTCAAATGAACTATAGTATCCC 59.831 40.741 5.65 0.00 0.00 3.85
3017 3155 7.169308 CCACACGTCAAATGAACTATAGTATCC 59.831 40.741 5.65 0.00 0.00 2.59
3018 3156 7.919091 TCCACACGTCAAATGAACTATAGTATC 59.081 37.037 5.65 6.92 0.00 2.24
3019 3157 7.778083 TCCACACGTCAAATGAACTATAGTAT 58.222 34.615 5.65 0.00 0.00 2.12
3020 3158 7.094075 ACTCCACACGTCAAATGAACTATAGTA 60.094 37.037 5.65 0.00 0.00 1.82
3021 3159 6.032956 TCCACACGTCAAATGAACTATAGT 57.967 37.500 0.00 0.00 0.00 2.12
3022 3160 6.100004 ACTCCACACGTCAAATGAACTATAG 58.900 40.000 0.00 0.00 0.00 1.31
3023 3161 6.032956 ACTCCACACGTCAAATGAACTATA 57.967 37.500 0.00 0.00 0.00 1.31
3024 3162 4.894784 ACTCCACACGTCAAATGAACTAT 58.105 39.130 0.00 0.00 0.00 2.12
3025 3163 4.330944 ACTCCACACGTCAAATGAACTA 57.669 40.909 0.00 0.00 0.00 2.24
3026 3164 3.194005 ACTCCACACGTCAAATGAACT 57.806 42.857 0.00 0.00 0.00 3.01
3027 3165 3.963383 AACTCCACACGTCAAATGAAC 57.037 42.857 0.00 0.00 0.00 3.18
3028 3166 3.066064 CCAAACTCCACACGTCAAATGAA 59.934 43.478 0.00 0.00 0.00 2.57
3029 3167 2.616376 CCAAACTCCACACGTCAAATGA 59.384 45.455 0.00 0.00 0.00 2.57
3030 3168 2.858260 GCCAAACTCCACACGTCAAATG 60.858 50.000 0.00 0.00 0.00 2.32
3031 3169 1.336755 GCCAAACTCCACACGTCAAAT 59.663 47.619 0.00 0.00 0.00 2.32
3032 3170 0.736053 GCCAAACTCCACACGTCAAA 59.264 50.000 0.00 0.00 0.00 2.69
3033 3171 1.098712 GGCCAAACTCCACACGTCAA 61.099 55.000 0.00 0.00 0.00 3.18
3034 3172 1.525077 GGCCAAACTCCACACGTCA 60.525 57.895 0.00 0.00 0.00 4.35
3035 3173 2.604174 CGGCCAAACTCCACACGTC 61.604 63.158 2.24 0.00 0.00 4.34
3036 3174 2.590575 CGGCCAAACTCCACACGT 60.591 61.111 2.24 0.00 0.00 4.49
3037 3175 2.280524 TCGGCCAAACTCCACACG 60.281 61.111 2.24 0.00 0.00 4.49
3038 3176 1.227853 ACTCGGCCAAACTCCACAC 60.228 57.895 2.24 0.00 0.00 3.82
3039 3177 1.227823 CACTCGGCCAAACTCCACA 60.228 57.895 2.24 0.00 0.00 4.17
3040 3178 0.818040 AACACTCGGCCAAACTCCAC 60.818 55.000 2.24 0.00 0.00 4.02
3041 3179 0.817634 CAACACTCGGCCAAACTCCA 60.818 55.000 2.24 0.00 0.00 3.86
3042 3180 0.534203 TCAACACTCGGCCAAACTCC 60.534 55.000 2.24 0.00 0.00 3.85
3043 3181 1.523758 ATCAACACTCGGCCAAACTC 58.476 50.000 2.24 0.00 0.00 3.01
3044 3182 1.880027 GAATCAACACTCGGCCAAACT 59.120 47.619 2.24 0.00 0.00 2.66
3045 3183 1.606668 TGAATCAACACTCGGCCAAAC 59.393 47.619 2.24 0.00 0.00 2.93
3046 3184 1.606668 GTGAATCAACACTCGGCCAAA 59.393 47.619 2.24 0.00 37.73 3.28
3047 3185 1.234821 GTGAATCAACACTCGGCCAA 58.765 50.000 2.24 0.00 37.73 4.52
3048 3186 0.107643 TGTGAATCAACACTCGGCCA 59.892 50.000 2.24 0.00 40.87 5.36
3049 3187 1.453155 ATGTGAATCAACACTCGGCC 58.547 50.000 0.00 0.00 40.87 6.13
3050 3188 3.483574 CGTAATGTGAATCAACACTCGGC 60.484 47.826 0.00 0.00 40.87 5.54
3051 3189 3.678072 ACGTAATGTGAATCAACACTCGG 59.322 43.478 0.00 0.00 40.87 4.63
3052 3190 4.903638 ACGTAATGTGAATCAACACTCG 57.096 40.909 0.00 0.00 40.87 4.18
3065 3203 4.695455 CCTTTTCCATGAGTCACGTAATGT 59.305 41.667 0.00 0.00 0.00 2.71
3066 3204 4.935205 TCCTTTTCCATGAGTCACGTAATG 59.065 41.667 0.00 0.00 0.00 1.90
3067 3205 5.160607 TCCTTTTCCATGAGTCACGTAAT 57.839 39.130 0.00 0.00 0.00 1.89
3068 3206 4.610605 TCCTTTTCCATGAGTCACGTAA 57.389 40.909 0.00 0.00 0.00 3.18
3069 3207 4.221924 TCATCCTTTTCCATGAGTCACGTA 59.778 41.667 0.00 0.00 0.00 3.57
3070 3208 3.007940 TCATCCTTTTCCATGAGTCACGT 59.992 43.478 0.00 0.00 0.00 4.49
3071 3209 3.599343 TCATCCTTTTCCATGAGTCACG 58.401 45.455 0.00 0.00 0.00 4.35
3072 3210 4.142513 GCTTCATCCTTTTCCATGAGTCAC 60.143 45.833 0.00 0.00 30.68 3.67
3073 3211 4.012374 GCTTCATCCTTTTCCATGAGTCA 58.988 43.478 0.00 0.00 30.68 3.41
3074 3212 3.379688 GGCTTCATCCTTTTCCATGAGTC 59.620 47.826 0.00 0.00 30.68 3.36
3075 3213 3.359950 GGCTTCATCCTTTTCCATGAGT 58.640 45.455 0.00 0.00 30.68 3.41
3076 3214 2.692041 GGGCTTCATCCTTTTCCATGAG 59.308 50.000 0.00 0.00 30.68 2.90
3077 3215 2.624029 GGGGCTTCATCCTTTTCCATGA 60.624 50.000 0.00 0.00 0.00 3.07
3078 3216 1.758862 GGGGCTTCATCCTTTTCCATG 59.241 52.381 0.00 0.00 0.00 3.66
3079 3217 1.362237 TGGGGCTTCATCCTTTTCCAT 59.638 47.619 0.00 0.00 0.00 3.41
3080 3218 0.783206 TGGGGCTTCATCCTTTTCCA 59.217 50.000 0.00 0.00 0.00 3.53
3081 3219 1.827344 CTTGGGGCTTCATCCTTTTCC 59.173 52.381 0.00 0.00 0.00 3.13
3082 3220 2.529632 ACTTGGGGCTTCATCCTTTTC 58.470 47.619 0.00 0.00 0.00 2.29
3083 3221 2.702270 ACTTGGGGCTTCATCCTTTT 57.298 45.000 0.00 0.00 0.00 2.27
3084 3222 3.181423 TGTTACTTGGGGCTTCATCCTTT 60.181 43.478 0.00 0.00 0.00 3.11
3085 3223 2.378547 TGTTACTTGGGGCTTCATCCTT 59.621 45.455 0.00 0.00 0.00 3.36
3086 3224 1.992557 TGTTACTTGGGGCTTCATCCT 59.007 47.619 0.00 0.00 0.00 3.24
3087 3225 2.507407 TGTTACTTGGGGCTTCATCC 57.493 50.000 0.00 0.00 0.00 3.51
3088 3226 5.594317 ACAATATGTTACTTGGGGCTTCATC 59.406 40.000 0.00 0.00 0.00 2.92
3089 3227 5.518865 ACAATATGTTACTTGGGGCTTCAT 58.481 37.500 0.00 0.00 0.00 2.57
3090 3228 4.929479 ACAATATGTTACTTGGGGCTTCA 58.071 39.130 0.00 0.00 0.00 3.02
3091 3229 5.914898 AACAATATGTTACTTGGGGCTTC 57.085 39.130 0.00 0.00 39.09 3.86
3092 3230 6.951778 AGTAAACAATATGTTACTTGGGGCTT 59.048 34.615 0.00 0.00 40.14 4.35
3093 3231 6.490492 AGTAAACAATATGTTACTTGGGGCT 58.510 36.000 0.00 0.00 40.14 5.19
3094 3232 6.769134 AGTAAACAATATGTTACTTGGGGC 57.231 37.500 0.00 0.00 40.14 5.80
3095 3233 8.343168 TGAAGTAAACAATATGTTACTTGGGG 57.657 34.615 17.64 0.00 40.14 4.96
3145 3283 9.822185 GAATGCCCTATTGAAATTTGTTAGATT 57.178 29.630 0.00 0.00 0.00 2.40
3146 3284 8.424133 GGAATGCCCTATTGAAATTTGTTAGAT 58.576 33.333 0.00 0.00 0.00 1.98
3147 3285 7.398618 TGGAATGCCCTATTGAAATTTGTTAGA 59.601 33.333 0.00 0.00 35.38 2.10
3148 3286 7.555087 TGGAATGCCCTATTGAAATTTGTTAG 58.445 34.615 0.00 0.00 35.38 2.34
3149 3287 7.487822 TGGAATGCCCTATTGAAATTTGTTA 57.512 32.000 0.00 0.00 35.38 2.41
3150 3288 6.371595 TGGAATGCCCTATTGAAATTTGTT 57.628 33.333 0.00 0.00 35.38 2.83
3151 3289 6.156602 TGATGGAATGCCCTATTGAAATTTGT 59.843 34.615 0.00 0.00 35.38 2.83
3152 3290 6.584488 TGATGGAATGCCCTATTGAAATTTG 58.416 36.000 0.00 0.00 35.38 2.32
3153 3291 6.811634 TGATGGAATGCCCTATTGAAATTT 57.188 33.333 0.00 0.00 35.38 1.82
3154 3292 8.495160 TTATGATGGAATGCCCTATTGAAATT 57.505 30.769 0.00 0.00 35.38 1.82
3155 3293 7.951806 TCTTATGATGGAATGCCCTATTGAAAT 59.048 33.333 0.00 0.00 35.38 2.17
3156 3294 7.296856 TCTTATGATGGAATGCCCTATTGAAA 58.703 34.615 0.00 0.00 35.38 2.69
3157 3295 6.851318 TCTTATGATGGAATGCCCTATTGAA 58.149 36.000 0.00 0.00 35.38 2.69
3158 3296 6.452757 TCTTATGATGGAATGCCCTATTGA 57.547 37.500 0.00 0.00 35.38 2.57
3159 3297 7.013083 GCTATCTTATGATGGAATGCCCTATTG 59.987 40.741 6.20 0.00 33.64 1.90
3160 3298 7.059156 GCTATCTTATGATGGAATGCCCTATT 58.941 38.462 6.20 0.00 33.64 1.73
3161 3299 6.389278 AGCTATCTTATGATGGAATGCCCTAT 59.611 38.462 6.20 0.00 33.64 2.57
3162 3300 5.728253 AGCTATCTTATGATGGAATGCCCTA 59.272 40.000 6.20 0.00 33.64 3.53
3163 3301 4.539293 AGCTATCTTATGATGGAATGCCCT 59.461 41.667 6.20 0.00 33.64 5.19
3164 3302 4.639310 CAGCTATCTTATGATGGAATGCCC 59.361 45.833 6.20 0.00 33.64 5.36
3165 3303 4.096081 GCAGCTATCTTATGATGGAATGCC 59.904 45.833 15.37 0.00 38.36 4.40
3166 3304 4.698780 TGCAGCTATCTTATGATGGAATGC 59.301 41.667 17.59 17.59 41.33 3.56
3167 3305 5.354513 CCTGCAGCTATCTTATGATGGAATG 59.645 44.000 8.66 5.16 33.64 2.67
3168 3306 5.498393 CCTGCAGCTATCTTATGATGGAAT 58.502 41.667 8.66 0.00 33.64 3.01
3169 3307 4.805272 GCCTGCAGCTATCTTATGATGGAA 60.805 45.833 8.66 0.00 38.99 3.53
3170 3308 3.307269 GCCTGCAGCTATCTTATGATGGA 60.307 47.826 8.66 0.00 38.99 3.41
3171 3309 3.008330 GCCTGCAGCTATCTTATGATGG 58.992 50.000 8.66 0.00 38.99 3.51
3172 3310 3.008330 GGCCTGCAGCTATCTTATGATG 58.992 50.000 8.66 0.00 43.05 3.07
3173 3311 2.911636 AGGCCTGCAGCTATCTTATGAT 59.088 45.455 3.11 0.00 43.05 2.45
3174 3312 2.333069 AGGCCTGCAGCTATCTTATGA 58.667 47.619 3.11 0.00 43.05 2.15
3175 3313 2.855209 AGGCCTGCAGCTATCTTATG 57.145 50.000 3.11 0.00 43.05 1.90
3176 3314 2.707791 TGAAGGCCTGCAGCTATCTTAT 59.292 45.455 10.33 0.00 43.05 1.73
3177 3315 2.103771 CTGAAGGCCTGCAGCTATCTTA 59.896 50.000 28.35 0.00 43.05 2.10
3178 3316 0.914644 TGAAGGCCTGCAGCTATCTT 59.085 50.000 10.33 8.37 43.05 2.40
3179 3317 0.469070 CTGAAGGCCTGCAGCTATCT 59.531 55.000 28.35 0.00 43.05 1.98
3180 3318 0.534652 CCTGAAGGCCTGCAGCTATC 60.535 60.000 33.06 13.24 43.05 2.08
3181 3319 1.277580 ACCTGAAGGCCTGCAGCTAT 61.278 55.000 33.06 18.47 43.05 2.97
3182 3320 1.903877 GACCTGAAGGCCTGCAGCTA 61.904 60.000 33.06 1.11 43.05 3.32
3183 3321 3.255397 ACCTGAAGGCCTGCAGCT 61.255 61.111 33.06 19.20 43.05 4.24
3184 3322 2.749441 GACCTGAAGGCCTGCAGC 60.749 66.667 33.06 18.10 39.32 5.25
3185 3323 1.376942 CTGACCTGAAGGCCTGCAG 60.377 63.158 31.73 31.73 39.32 4.41
3186 3324 2.752358 CTGACCTGAAGGCCTGCA 59.248 61.111 14.50 14.50 39.32 4.41
3187 3325 2.045536 CCTGACCTGAAGGCCTGC 60.046 66.667 5.69 4.07 39.32 4.85
3188 3326 2.673523 CCCTGACCTGAAGGCCTG 59.326 66.667 5.69 0.00 39.32 4.85
3189 3327 2.612115 CCCCTGACCTGAAGGCCT 60.612 66.667 0.00 0.00 39.32 5.19
3190 3328 4.432741 GCCCCTGACCTGAAGGCC 62.433 72.222 0.00 0.00 37.66 5.19
3191 3329 3.650950 TGCCCCTGACCTGAAGGC 61.651 66.667 0.00 0.00 44.13 4.35
3192 3330 2.067932 TTGTGCCCCTGACCTGAAGG 62.068 60.000 0.00 0.00 42.17 3.46
3193 3331 0.038744 ATTGTGCCCCTGACCTGAAG 59.961 55.000 0.00 0.00 0.00 3.02
3194 3332 0.482446 AATTGTGCCCCTGACCTGAA 59.518 50.000 0.00 0.00 0.00 3.02
3195 3333 0.482446 AAATTGTGCCCCTGACCTGA 59.518 50.000 0.00 0.00 0.00 3.86
3196 3334 1.341080 AAAATTGTGCCCCTGACCTG 58.659 50.000 0.00 0.00 0.00 4.00
3197 3335 2.101640 AAAAATTGTGCCCCTGACCT 57.898 45.000 0.00 0.00 0.00 3.85
3236 3374 9.251440 TCATAGTGTACAGGACAAGTTAATAGT 57.749 33.333 0.00 0.00 40.66 2.12
3239 3377 9.959721 AAATCATAGTGTACAGGACAAGTTAAT 57.040 29.630 0.00 0.00 40.66 1.40
3240 3378 9.431887 GAAATCATAGTGTACAGGACAAGTTAA 57.568 33.333 0.00 0.00 40.66 2.01
3241 3379 8.812972 AGAAATCATAGTGTACAGGACAAGTTA 58.187 33.333 0.00 0.00 40.66 2.24
3242 3380 7.680730 AGAAATCATAGTGTACAGGACAAGTT 58.319 34.615 0.00 0.00 40.66 2.66
3243 3381 7.039011 TGAGAAATCATAGTGTACAGGACAAGT 60.039 37.037 0.00 0.00 40.66 3.16
3244 3382 7.323420 TGAGAAATCATAGTGTACAGGACAAG 58.677 38.462 0.00 0.00 40.66 3.16
3245 3383 7.239763 TGAGAAATCATAGTGTACAGGACAA 57.760 36.000 0.00 0.00 40.66 3.18
3246 3384 6.850752 TGAGAAATCATAGTGTACAGGACA 57.149 37.500 0.00 0.00 34.94 4.02
3247 3385 9.416794 CATATGAGAAATCATAGTGTACAGGAC 57.583 37.037 0.00 0.00 36.21 3.85
3248 3386 8.090831 GCATATGAGAAATCATAGTGTACAGGA 58.909 37.037 6.97 0.00 36.21 3.86
3249 3387 7.874528 TGCATATGAGAAATCATAGTGTACAGG 59.125 37.037 6.97 0.00 36.21 4.00
3250 3388 8.822652 TGCATATGAGAAATCATAGTGTACAG 57.177 34.615 6.97 0.00 36.21 2.74
3251 3389 9.783081 AATGCATATGAGAAATCATAGTGTACA 57.217 29.630 6.97 0.00 36.21 2.90
3254 3392 8.944029 GCTAATGCATATGAGAAATCATAGTGT 58.056 33.333 6.97 0.00 36.21 3.55
3255 3393 8.114905 CGCTAATGCATATGAGAAATCATAGTG 58.885 37.037 6.97 0.00 39.64 2.74
3256 3394 7.821359 ACGCTAATGCATATGAGAAATCATAGT 59.179 33.333 6.97 0.00 39.64 2.12
3257 3395 8.194433 ACGCTAATGCATATGAGAAATCATAG 57.806 34.615 6.97 0.00 39.64 2.23
3258 3396 8.552083 AACGCTAATGCATATGAGAAATCATA 57.448 30.769 6.97 0.75 39.64 2.15
3259 3397 7.444629 AACGCTAATGCATATGAGAAATCAT 57.555 32.000 6.97 0.00 39.64 2.45
3260 3398 6.866010 AACGCTAATGCATATGAGAAATCA 57.134 33.333 6.97 0.00 39.64 2.57
3261 3399 7.746475 GGTTAACGCTAATGCATATGAGAAATC 59.254 37.037 6.97 0.00 39.64 2.17
3262 3400 7.308589 GGGTTAACGCTAATGCATATGAGAAAT 60.309 37.037 14.95 0.00 39.64 2.17
3263 3401 6.017440 GGGTTAACGCTAATGCATATGAGAAA 60.017 38.462 14.95 0.00 39.64 2.52
3264 3402 5.468746 GGGTTAACGCTAATGCATATGAGAA 59.531 40.000 14.95 0.00 39.64 2.87
3265 3403 4.994852 GGGTTAACGCTAATGCATATGAGA 59.005 41.667 14.95 0.00 39.64 3.27
3266 3404 4.154195 GGGGTTAACGCTAATGCATATGAG 59.846 45.833 20.55 0.00 39.64 2.90
3267 3405 4.069304 GGGGTTAACGCTAATGCATATGA 58.931 43.478 20.55 0.00 39.64 2.15
3268 3406 3.190535 GGGGGTTAACGCTAATGCATATG 59.809 47.826 20.55 0.00 39.64 1.78
3269 3407 3.181438 TGGGGGTTAACGCTAATGCATAT 60.181 43.478 20.55 0.00 39.64 1.78
3270 3408 2.172930 TGGGGGTTAACGCTAATGCATA 59.827 45.455 20.55 0.00 39.64 3.14
3271 3409 1.064314 TGGGGGTTAACGCTAATGCAT 60.064 47.619 20.55 0.00 39.64 3.96
3272 3410 0.328592 TGGGGGTTAACGCTAATGCA 59.671 50.000 20.55 0.00 39.64 3.96
3273 3411 1.607148 GATGGGGGTTAACGCTAATGC 59.393 52.381 20.55 5.16 0.00 3.56
3274 3412 2.925724 TGATGGGGGTTAACGCTAATG 58.074 47.619 20.55 0.00 0.00 1.90
3275 3413 3.876309 ATGATGGGGGTTAACGCTAAT 57.124 42.857 20.55 14.43 0.00 1.73
3276 3414 3.054287 TGAATGATGGGGGTTAACGCTAA 60.054 43.478 20.55 10.66 0.00 3.09
3277 3415 2.506231 TGAATGATGGGGGTTAACGCTA 59.494 45.455 20.55 11.55 0.00 4.26
3278 3416 1.283613 TGAATGATGGGGGTTAACGCT 59.716 47.619 20.55 2.74 0.00 5.07
3279 3417 1.757682 TGAATGATGGGGGTTAACGC 58.242 50.000 13.96 13.96 0.00 4.84
3280 3418 3.616219 TCTTGAATGATGGGGGTTAACG 58.384 45.455 0.00 0.00 0.00 3.18
3281 3419 5.993748 TTTCTTGAATGATGGGGGTTAAC 57.006 39.130 0.00 0.00 0.00 2.01
3282 3420 6.014669 CAGTTTTCTTGAATGATGGGGGTTAA 60.015 38.462 0.00 0.00 0.00 2.01
3283 3421 5.480073 CAGTTTTCTTGAATGATGGGGGTTA 59.520 40.000 0.00 0.00 0.00 2.85
3284 3422 4.284234 CAGTTTTCTTGAATGATGGGGGTT 59.716 41.667 0.00 0.00 0.00 4.11
3285 3423 3.834231 CAGTTTTCTTGAATGATGGGGGT 59.166 43.478 0.00 0.00 0.00 4.95
3286 3424 3.834231 ACAGTTTTCTTGAATGATGGGGG 59.166 43.478 0.00 0.00 0.00 5.40
3287 3425 4.813027 CACAGTTTTCTTGAATGATGGGG 58.187 43.478 0.00 0.00 0.00 4.96
3288 3426 4.240096 GCACAGTTTTCTTGAATGATGGG 58.760 43.478 0.00 0.00 0.00 4.00
3289 3427 4.873817 TGCACAGTTTTCTTGAATGATGG 58.126 39.130 0.00 0.00 0.00 3.51
3290 3428 6.831727 TTTGCACAGTTTTCTTGAATGATG 57.168 33.333 0.00 0.00 0.00 3.07
3291 3429 7.550196 AGTTTTTGCACAGTTTTCTTGAATGAT 59.450 29.630 0.00 0.00 0.00 2.45
3292 3430 6.873076 AGTTTTTGCACAGTTTTCTTGAATGA 59.127 30.769 0.00 0.00 0.00 2.57
3293 3431 7.064060 AGTTTTTGCACAGTTTTCTTGAATG 57.936 32.000 0.00 0.00 0.00 2.67
3294 3432 7.277760 GGTAGTTTTTGCACAGTTTTCTTGAAT 59.722 33.333 0.00 0.00 0.00 2.57
3295 3433 6.588373 GGTAGTTTTTGCACAGTTTTCTTGAA 59.412 34.615 0.00 0.00 0.00 2.69
3296 3434 6.096695 GGTAGTTTTTGCACAGTTTTCTTGA 58.903 36.000 0.00 0.00 0.00 3.02
3297 3435 5.290885 GGGTAGTTTTTGCACAGTTTTCTTG 59.709 40.000 0.00 0.00 0.00 3.02
3298 3436 5.046950 TGGGTAGTTTTTGCACAGTTTTCTT 60.047 36.000 0.00 0.00 0.00 2.52
3299 3437 4.464597 TGGGTAGTTTTTGCACAGTTTTCT 59.535 37.500 0.00 0.00 0.00 2.52
3300 3438 4.749976 TGGGTAGTTTTTGCACAGTTTTC 58.250 39.130 0.00 0.00 0.00 2.29
3301 3439 4.810191 TGGGTAGTTTTTGCACAGTTTT 57.190 36.364 0.00 0.00 0.00 2.43
3302 3440 4.810191 TTGGGTAGTTTTTGCACAGTTT 57.190 36.364 0.00 0.00 0.00 2.66
3303 3441 5.115480 CAATTGGGTAGTTTTTGCACAGTT 58.885 37.500 0.00 0.00 0.00 3.16
3304 3442 4.442753 CCAATTGGGTAGTTTTTGCACAGT 60.443 41.667 17.36 0.00 0.00 3.55
3305 3443 4.057432 CCAATTGGGTAGTTTTTGCACAG 58.943 43.478 17.36 0.00 0.00 3.66
3306 3444 3.706594 TCCAATTGGGTAGTTTTTGCACA 59.293 39.130 24.29 0.00 38.11 4.57
3307 3445 4.055360 GTCCAATTGGGTAGTTTTTGCAC 58.945 43.478 24.29 6.70 38.11 4.57
3308 3446 3.706594 TGTCCAATTGGGTAGTTTTTGCA 59.293 39.130 24.29 0.00 38.11 4.08
3309 3447 4.329462 TGTCCAATTGGGTAGTTTTTGC 57.671 40.909 24.29 3.35 38.11 3.68
3310 3448 6.783892 CATTGTCCAATTGGGTAGTTTTTG 57.216 37.500 24.29 7.93 38.11 2.44


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.