>input_sequence_54228
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------ATGAACCAGTTCGTTCCTGCAGATTGGACCGGCAACATGGGA
GACGCCCTGCCGCCATTAAGGTCCGTCCTCCTAACCGCCGGATTCATCTTCTCTTTTCTTGGATCGGCCGA---------
---TGGAATCAA--------TGACTGATTCTTCCATGTGGCGTGTTGCTGCAGCAGCGAAGACGACGGCCTCGTCGAGCT
GCTGTGGTGCAGCGGCCACGTCGTCATGCAGAGCCAGGCGCCTCCAAGGCAGGCGGTGCCCGAGCAGGAGGCGGCGCCGT
GGTTCCAGTACCCCTTCGTCGATGAAGACAACTGCTCGGTCGAGAGGGACCTCTTCTCGGAGATCTTCGGCAGAATGCCG
GCGGATGGCGCAGGCAGGCCGTGCAAGGAGGATGATAAGCAGCGAAGCGCCGCGGACGCGGTCACCGCGCTCCGAAGCGG
GGTGATGCCGCCGCCGCTTCTGGCGGGTAAAGCAGGGTTGCACGGCGGCGGCCCGCGCGGCTCGCCTGTCTCAGAGGCCG
GCGAGTCCTCGGTGGTCACGATGGCATTCAGGAGGCCCTGCGGCGGGAGCAACCAGGCCCAGACGCCCCACGTCTCGGAT
ACCGCCCGCGACGACACCGTGCTGCTGCCGCGGAGCG------GCAGGGAGGCCAGGGACGCTAGGTCCTACCTCAGCGT
GTCGGCGACGTTGACCTCGTCGTCGACGTGGTCGAGGCCTTCTGGCACCAGCAAGCGGAAGCTGAGCGAGGTCCCCAGTG
AGGTTATGCAGGACGTGGAGTCGGACTCCGCCGACGTGACGTGCGAGACGGCGCGGAAGCCGACGACAGCCAAACGGCGG
CGCGCCGCCCAAGTGCACAACCTCTCGGAGAGGGTACCTGACTAATACATTCGTCTTACTTCGAGTTTCCTGGACACTTG
GGCC------------TCTTGGCCGCCATTGCTGACTG--TGTTCTGCGTGATGGATGCAGAGGAGAAGGGACAGGATCA
ACGAGAAGATGAGGGCCCTGCAAGAACTCGTACCCCACTGCAACAAAGTATGTAATTCCAATCCCTCCGCAGCTTCGCTA
CTCGCTAGTCGTTACGAATACGATCTTAAATATAATTCT--------TGGCAATGGCGATCGGTCTGATCATCTCGTTCT
TGGCATGAAATTCTTCCACCAGACGGACAAGGCGTCGATGCTGGACGAGGCGATCGAGTACCTCAAATCGCTGCAGCTGC
AGCTGCAGCTGATGTGGGCTATGGGCGGCCGCATGGCGCTGGCGCCGGCGCCGGTGATGTTCCCGGCGGGCGCCCACCAG
TACATGCAGCGGATGGCCGCCATTAGTTCCCGGATGCCGCCATTCACGACTGGCGTATAG--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------
>chr5B_1_TraesCS5B01G054800
GAACATGTCAAACATGCATGCATACTGCTCCGTGTTGAGCTGGGCTTGACATGGACGTGACGCTCATCCCTCGGGAAAAT
TGGCTCCACACGGCTGGATAGGCCGATCGCCCAAGATCTCGAAAATCTTCTCGGAACAGTGACCCGCAAGCGCGCGCGAT
CGTATCGTTTCAGCTTACACGCCGACGATCGGTCATGATCATGA-CCGCCGTGCTACGGTAAGTGAACCTTGCTTTGG-C
CTCTGAGTACGCGCA---TACAATGAA---TGATCTCTGGGTAAGTGAGACGATGATGATCGTA----TGTTTCCCAGGT
GGCGGGAAGACGACGGCGACGATTATCACGACGGTG---ATGATGCGTGTGTAACGTTGCTAGTTAAGTCGTACTTACTC
CATCCGTTCCGATTTACTCGTCGAAATTGAACGGAAGTATATATAAGAGGTGAGAGCCATTGCCTGTCGCTGTCTGTTGA
TCCAGTCTCCCGGGGAATGATATTGATGTATATCCATCCAGTTCAGTCAAATCAACAGCACAATATGCTGCTGCTA----
-------CTGTAGTAGTGTACTTCTGGAGC------TCTGAACCCACCCAACTTGGCTTGATA--AAAAGCCCACCCTGC
TGCCCAGTTGCAACTCGCCGCTCCA-----TCCATCCTGCTGCACGTCTACCGCTCAGCTTAATTAGAGGAGGAGAAAGA
GAGTTGCAGGTGTGTGCTGATCAGAACAGATCAGATCGGCAGGAGGCTCA------------------------------
----TAGTATCTCACCAACTGCAGCAACATTCAGAAGCAGCTAGCTCATCAGGTACATGTTACTTCTGTGTCCTACCAGA
GTGTA-----CCAAACTATACCTGTTTAGCTACACATATGAAGCATCTGCCTTTTCTGGTCCTTTTCGAAAAAAAGAATC
TGCCTTTTCTGGTCTTTCTAATTCTTGGTTTGCTGCTCACATGTCAAATGGGATATGCTATTTTATCATCATATTCTCTT
TGCAGCGAGTGAGCGAGTGTGTCTCGTACTGAGGAACAATGAACCAGTTCGTTCCTGCAGATTGGACCGGCAACATGGGA
GACGCCCTGCCGCCATTAAGGTCCGTCCTCCTAACCGCCGGATTCATCTTCTCTTTTCTTGGATCGGCCGA---------
---TGGAATCAA--------TGACTGATTCTTCCATGTGGCGTGTTGCTGCAGCAGCGAAGACGACGGCCTCGTCGAGCT
GCTGTGGTGCAGCGGCCACGTCGTCATGCAGAGCCAGGCGCCTCCAAGGCAGGCGGTGCCCGAGCAGGAGGCGGCGCCGT
GGTTCCAGTACCCCTTCGTCGATGAAGACAACTGCTCGGTCGAGAGGGACCTCTTCTCGGAGATCTTCGGCAGAATGCCG
GCGGATGGCGCAGGCAGGCCGTGCAAGGAGGATGATAAGCAGCGAAGCGCCGCGGACGCGGTCACCGCGCTCCGAAGCGG
GGTGATGCCGCCGCCGCTTCTGGCGGGTAAAGCAGGGTTGCACGGCGGCGGCCCGCGCGGCTCGCCTGTCTCAGAGGCCG
GCGAGTCCTCGGTGGTCACGATGGCATTCAGGAGGCCCTGCGGCGGGAGCAACCAGGCCCAGACGCCCCACGTCTCGGAT
ACCGCCCGCGACGACACCGTGCTGCTGCCGCGGAGCG------GCAGGGAGGCCAGGGACGCTAGGTCCTACCTCAGCGT
GTCGGCGACGTTGACCTCGTCGTCGACGTGGTCGAGGCCTTCTGGCACCAGCAAGCGGAAGCTGAGCGAGGTCCCCAGTG
AGGTTATGCAGGACGTGGAGTCGGACTCCGCCGACGTGACGTGCGAGACGGCGCGGAAGCCGACGACAGCCAAACGGCGG
CGCGCCGCCCAAGTGCACAACCTCTCGGAGAGGGTACCTGACTAATACATTCGTCTTACTTCGAGTTTCCTGGACACTTG
GGCC------------TCTTGGCCGCCATTGCTGACTG--TGTTCTGCGTGATGGATGCAGAGGAGAAGGGACAGGATCA
ACGAGAAGATGAGGGCCCTGCAAGAACTCGTACCCCACTGCAACAAAGTATGTAATTCCAATCCCTCCGCAGCTTCGCTA
CTCGCTAGTCGTTACGAATACGATCTTAAATATAATTCT--------TGGCAATGGCGATCGGTCTGATCATCTCGTTCT
TGGCATGAAATTCTTCCACCAGACGGACAAGGCGTCGATGCTGGACGAGGCGATCGAGTACCTCAAATCGCTGCAGCTGC
AGCTGCAGCTGATGTGGGCTATGGGCGGCCGCATGGCGCTGGCGCCGGCGCCGGTGATGTTCCCGGCGGGCGCCCACCAG
TACATGCAGCGGATGGCCGCCATTAGTTCCCGGATGCCGCCATTCACGACTGGCGTATAGAGTTCAAATGACCCAGAATT
GAGTTGAGAGACTTTC-TCGTGATCGCTTTACTTTGTTCAGATAAGTTTGGTGTACTGTATTTTATTTGAAAAAAATCGT
ATTTAGGAGCTTGACAAGTCAACCTACTCCTTTTATTTTGAAAAATGTAAGGCGTGCTTTGACTATTTAAACTCATGTTT
TAAGCAACATGTGAATCATGTTATTATAACAAGAATCACTATCATCAGATTCACATTTGAAAGTAATTCTTGTGGTTATC
ACTGTAACTATTAATAAAAATATTGTGCATGGAATTTATGGTCAAAGCCCAAGTGGGCAACAAACATATGCCCTGCTTTT
CCAAATTGATGGTAT---TATTTTCCTTTTATCGACGACATTATGCATATTTACACACTAATTTATAAAAGGGGTCCGTC
TAAAACTCATCTCGGTGAGA--CTTTTTTTTTTGCAACAATGATCAGATCTAGATGAGACTTTGACATGTCACAGCTAAG
TGATGTCATCTCTCTTGTGTGGTCTCATTTTCCATCTTATCAA-----TTTTTACCTTATTTTTTGTTTCGTATACGTTT
GTTTTTATTTGTTGTAGGTGTGTTGTTTTTGTCCCATGGATTGATGTAATCTTTTGTCTGTTCCATTGGGTTGTTGCGTT
TTTATTACTAGTTGATGCCCCGCGCGTTGTTGCGGGATACTATAGTTCATTTGACGTGTGGAGTTTGGCCGAGTGTTGAT
TCACATTACGTGACTCATGGAAAAGGATGAAGCCCCAAGTAACATATTGTTTACTTCAATGCAAGATTATCAAAAAAAAA
AAAATCTAACAAATTTCAATAGGGCATTCCATCATAAGATAGCTGCAGGCCTTCAGGTCAGGGGCACAATTTTTTATGAT
GGGAGATTATAATACTATTAACTTGTCCTGTACACTATGATTTCTCATATGCATTAGCGTTAACCCCCATCATTCAAGAA
AACTGTGCAAAAACTACCCAATTGGACAATG
>chr5A_1
GAACATGTCAAACATGCTTACATGCT---CCGTGTTGAGCTGGGCTTGACATGGACGTGACGCTCATCCCTTGGGGAAAC
TGGCTCCACACGGCCGGACAGCCCGATCGCCCAAGATCTCGAAAATCTTCTCCGAACAGTGACCCGCAAGCGCACCGGGT
CGTATCGTTTCAGCTCACACGCCGACGATCGATCATGATCATGACCCGCCCTGCTGCGCTAAGTGAACCTTGCTTTGGAC
CGCCGAGTACGCGCA---TACAACGAA---TAATGATCTCTGGGTG----------------------TGTTTCCCAGGT
GGCGGGAAGACGACGGCGA---------------TG---ATGATGCGTGTGTAATGTTGCTAGTTAGGTCGTACTTA---
-----------------------------------------TATGAGAGGTGAGAGCCATTACCTGTCGCTGTCTGTTGA
TCCAGTCTCCCGGGGAGTGATACTGATATATATCCATCCAGTTCAGTCAAATCAACAGCACAATATGCTGCTGCCAGGCT
GCTACAACTGTGGTGGTGTACTTCTGAAGTTCTGATTCTGAACCCACCCAGCTTGGCTTGATATAAAAAGCCCACCCTGC
TGCCCAGTTGCAACTCGCCGCTCCA-----TCCATCCTGCTGCACGTTAACCGCTCGGCTTAATTGGAGGGGGAGAGACA
GAGTTGCAGGTGTGTGCTGATCAGAACAGATCAGGTCAGCTGGAGCTGGAGGTTGATCTGAAGGCTCTGCACTAATAGTA
GAAGTAGTATCTCACCAACTGCAGCAACATTCAGAAGCAGCTAGTTCATCAGGTGCATGTTACTTCTGTGTCCTACCAGA
GTGTATATTACCTAACTATACCTGTTTAGCTACAACTATCTG-------------------------------------C
TGCCTTTTCTGGCCTTTCTAATTCTTGGTGTGCTGCTCACATGTCAAAT-GGATATGCTATTTTATCATCATATTCTCTT
TGCAGTGAGTGAGCGAGTGTGTCTCATACTGAGGAACGATGAACCAGTTCGTCCCGGCAGATTGGACCGGTAACATGGGA
GACGCCCTGCCGCCGTTAAGGTCCGTCCTCATCACCGCTGGATTCATCTTCTTTTTTCTTGGATCGGCAAC--ATGGGAG
CTCTGGAATCCA--------TGACTGATTCTTGCATGTGGCGTGTTGCTGCAGCGGCGAAGACGACGGCCTCGTCGAGCT
GCTGTGGTGCAGCGGCCACGTCGTCATGCAGAGCCAGGCGCCGCCAAGGCCGGCGGTGCCCGAGCAGGAGGCGGCGCCGT
GGTTCCAGTACCCCGTCGTCGATGAAGACGACTACTCCGTCGAGAGGGACCTCTTCTCGGAGATCTTCGGCGGAGTGCCG
GCGGATGGCGCAGGCAGGCCGTGCAAAGAGGAGGATAAGGAGCGAGGCGCCGCGGACGCGGTGACCGCGCTCCGAAGCGG
GGTGATGCCGCCGCCGCTGCTGACGGATAAAGCAGGGTTGCACGGCGACGGCCCGCGCGACTCGCCGGCGTCAGAGGCCG
GCGAGTCCTCGGTGGTCACGATGGGTTCCAGGAGGGTCTGCGGCGGGAGCAACCAGGCCCAGACGCCCCACGTCTCGGAT
ACCGCCGACGACGACAGCGTGCTGCTGCCGCGGAGCG------GCAGGGAAGCCAGGGACGCTAGGTCCTACCACAGCGC
GTCGGCGACGTTGACCACGTCGTCGACGTGGTCGAGGCCTTCCGGCGCCAGCAAGCGGAAGCAGAGCGAGGGCCCCAGTG
AGGCTATGCAGGACGTGGAGTCGGACTCCGCCGACGTGACGTGCGAGACGGCGCAGAAGCCGACTACAGCCAAACGGCGG
CGCGCCGCCCAAGTGCACAACCTCTCGGAGAGGGTACGTGATCAATACCTTCGACTTACTTCGAGTTTCCTTGA------
---C------------TCTTGGCCGCCATTGCTGACTC--TGTTCTGCGTCATGGATGCAGAGGAGAAGGGACAGGATCA
ACGAGAAGATGAGGGCCCTGCAAGAACTCGTACCCCACTGCAACAAAGTATGTACA------------------------
----------GCTTCGAATACGATCTTAAATATAATTCT--------TAGCAATTGCGATCGATCTGATCATCTCGTTCT
TGGCATCGAATTCTTCCACCAGACGGACAAGGCGTCGATGTTGGACGAGGCGATCGAGTACCTCAAATCGCTGCAGCTGC
AGCTGCAGGTGATGTGGGCTATGGGCGGCCGCATGACGCTGGCGCCGGCGCCGGTGATGTTCCCGGCGGGCGCCCACCAG
TACATGCAGCGGATGGCCGCCAT--------------------TCACGACCTGCGTATACAGTTCAAATGACCCAGAAAT
GACCCAGAC-ACTTTCTTCGTGATCGCTTTACTTTGTTCAGAGAAGTTCGGTGTACTGTATTTTATAT-AAAAAAATCGT
ATTTAGGAGTTTGACAAGTCAACCTAATCCTTTTATTTTG--AAATGTAAGGCGTGTTTTGACTATTTAAACTCATGTTT
TAACCAACATGTGAATCATGTTATTAT-----GAATCAGTATCATCAGATTCACATTTGAAAGTAGTTCTTGTGGTTATC
ACGGTGTAACTATAATGAAATAATGTGCATGAAATTTATGCTCAAAGTCCAGTTGGGAAACCAACATATGCCTTG---TT
CCAAATTGATGGGAGTACTATTTTCCTTTTATCGGCGGCATTATGCATATTTACACATTAATTTATAAAGAGG-TCTGTT
TAAAACTCACCT--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------
>chr5D_12
-----------ACATGCATGCATGCTGCTCCGTGTTGAGCTGGGCTTGACACGGACGTGACGCTCATCCCTTGGGGAAAC
TGGCTCCACACGGCCGGATAGCCCGATCGCCTAAGATCTGGAAAATCTTCTCGGAACAGTGACCCGCAAGCGCGCGCGAT
CGTATCGTTTCAGCTTACACGCCGACGATCACTCATGATC------------------------GAACCTTGCTCTGG-C
CTCTGAGTACGCGCAATATACAATGAATAGTGATCTCTGGGTAAGCAAGACGATGATGATCGTATGTATGTTTCCCAGGT
GGCGGGAAGGCGACGGCGACGATTATCACGACAAGGACTATGATGCGTGTGTAATGTTGCTAGTTAGGTCGTACTTG---
-----------------------------------------TATGAGAGGTGAGAGCCATTACCTGCCGCTGTCTGTTGA
TCCAGTCTCCCGGGGAATGATATTGATATATATCCATCCAGTTCAGTCAAATCAACAGTACAATATGCTGCTGCTAGGCT
GCTACAACTGTAGTGGTGTACTTCTGAAGTTCTGA------ACCCACCCAACTTCGCTTGATA--AAAAGCCCACCCTGC
TGCCCAGTTGCAACTCGCCGCTCCATCCATTCCATCCTGCTGCAATTCCACCGCTGAGCTTACAGGGGA----AGAAAGA
GAGTTGCAGGTGTGTGCTGATCAGAACAGATCAGATCAGCAGGAGGCTCA------------------------------
----TAGTATCTCACCAACTGCAGCAACATTCAGAAGCAGCTAGTTCATCAGGTACATGTTACTTCTGTGTCCTACCAGA
GTGTA-----CCAAACTATACCTGTTTACCTACACATATGACGCAT---------------------------------C
TGCCTTTTCTGGTCTTTCTAATTCTTGGTTTGCTGCTCACATGTCAAAT-GGATATGCTATTTTATCATCACATTCTCTT
TGCAGCGAGTGAGCGAGTGTGTCTCATACAGAGGAACAATGAACCAGTTCGTCCCGGCAGATTGGAGCGGCAACATGGGA
GACGCCCTGCCGGCATTAAGGTCCGTCCTCATCACCGCCTGATTGATCATCTTTTTCTTTCTTGAAACAACCAATGGGGG
CTCGGGAATCCGTGACTTATTGTCTGATTCTTGCATGTGGCGTGTCCCTCCAGCGGCGAAGACGACGGCCTCGTCGAGCT
GCTGTGGTGCGGCGGCCACGTCGTCATGCAGAGCCGGGCGCCGCCAAGGCCGGCGGTGCGCGAGCAGGAGGCGGCGCCGT
GGTTCCAGTACACCGTCGTCGACGAAGACGACTACTCGGTCGAGAGGGACCTATTCTCCGAGATCTTCGACGGAATGCCG
GCGGATGGTGCAGGCAGGCCGTGCAAGGAGGAGGATAAGCAGCGAGGGGCCGCGGACGCAGTGACCGCGCTCCGAAGCGG
GGTGATGCCGCCGCCGCTGCTGACGGGTAAAGCAGGGTTGCACGGCGACGGCCCGCGCGTCTCGCTGGCGTCAGAGGCCG
GCGAGTCCTCTGTGGTCACGATTGGTTCCAGGAGGGTCGGCGGCGGGGGCAACCAGGCCCAGACGGCGCACGTCTCGGAT
GCCGCCGGCGACGACAGCGTGCCGCTGCCGCTGATCCGCAACCGCAAGGAGGCCAGGGACTCTAGGTCCTACCACAGCGC
GTCGGCGACGTTGACCTCGTCGTCGACGTGGTCGAGGCCTTCCGGCACCAGCAAGCGGAAGCAGAGCGAGGGCCCCAGTG
AGGTTATGCAGGACGTGGAGTCGAACTCCGCCGACGTGACGTGCGAGACGGCGCAGAAGCCGACGACAGCCAAACGGCGG
CGCGCCGCCCAAGTGCACAACCTCTCGGAGAGGGTACCGGATTAACACCTTCGTCCTACTTCGAGTTTCCTTGA------
---CTCTTGGGCCTCTTCTTGGCCGCCATTGCTGACTCTCTGTTCTGCGTGATCGATGCAGAGGAGAAGGGACAGGATCA
ACGAGAAGATGAGGGCCCTGCAAGAACTCGTACCCCACTGCAACAAAGTATGTAATTCCTATCCCTCCGCAGCTTCGCTT
-----TAGTCGCTACGAATGCGATCTTCAATATATAACTCTTAGCAATGGCGATGGCGATCGATCTGATCATCCCGTTCT
TGGCATCGAATTCTT-CACCAGACGGACAAGGCGTCGATGCTGGACGAGGCGATCGAGTACCTCAAATCGCTGCAGCTGC
AGCTGCAGCTGATGTGGGCTATGGGCGGCCGCATGACGCTGGCTCCGGCGCCGGTGATGTTCCCGGCGGGCGCCCACCAG
TACATGCAGCGGATGGCCGCCATTAGTTCCCGGATGCCGCCATTCACGACTTGCGCATACAGTTCAAATGACCCAGAATT
GAGCTGAGAGACTTTGTTCGTGATCGCTTTACTTTGTTCAGAGAAGTTTGCTGTACTGTATTTTATTA-AAAAATATCGT
ATTTAGGAATTTGACAAGTCAACCTACT----------------------------------------------------
------------------------------AAGAATCAGTATCATCAGATTCACATTTGAAAGTAGTTCTTGTGGCTATC
A----AAATATTCATGAAAATATTGTGCATGAAATTTATGGTCAAAGTCCAAGTGGGCAACAAACATATGCCTTGCTTTT
CCAAATTGATGGTAT---TATTTTCCCTTTATCGACGACATTATGCATATTTACACACTAATTTATAAAAGGG-TCCATC
TAAAACTCATCTAGATGAGACTCTTTTTTTTTTGCAAAAATGATCAGATCTAGATGAGACTTTGACATGTCACAGCTAAG
TGATGTCATCTCTTTTGTGTGGTCTCATTTTCCTTCTTATCAAATATTTTTTTACCTTATTTTTTGTTTCTTGTATGTTT
GTTTTTATTTGTTGTA----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------
>SNPs
-----------------------S-----------------------------------------------S---S---S
--------------S------S----------------------------------------------------------
-------------------------------S------------------S----S--S---------------------
---------------------------------------------SS---------------------------------
--------------------------------SS--------------------S-----------S----------SSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---S----------------S------------------
---------------------------S----------------------------------------------------
--------------S-----------S--S--------------------------------------------------
------------------------------------------------S----------------S----S---------
-------------------------------------S------------------------------------------
--------------------------------------------S-----------------------------------
-----------------------------------------S----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-
-------------------------------------------------S------------------------------
-------------------------S--------------------------S--S------------------------
------------------------------S-S-------------------S---------------SSS---------
----------S---------------------S---------------------S-------------------------
------------------------------------------S-------S-----------------------------
--------------S--------------S---S-------------------------------------S--------
--------------------------------S------------S----------------S-----------------
------------------S---S------------------------S-----------S------S-SS----------
------------------------SS-S-------SS-------------------------------------------
------S---------S--------------------------------------------------------S-----S
------------------------------------------S-------------------S--------S--------
------------------------------------------------------S-------------------------
-----------------------------------------S------S----------------------S--SSSSSS
SSS----------------------------------S------------------------------------------
-----------------------------------------------------------S-------------------S
SSSSS------S--------------------------------------------------S-----------------
------SS------------------------------------------------------------------------
-----------------------------------S--------------------------------------------
---------------------------------------------------S-------S--------------------
---S--------------------------------------S-------------------------S-----------
---------S------------------------------SS--------------S-----------------------
---S-----------------------SSS--------S--------------------------S--------------
--S----S----S--S---------------S---------------S------------------------S-------
-------------------------------------------------------------------------S------
------------S-S----------------------S------------------------------------------
-------------S-------------------S------------------------------------S-S--S----
----------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_942
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------GCATCTGCCTTTTCTGGTCC------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------
>reverse_2038
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------GTGTTCTGCGTGATGGATGC-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------
>forward_1173
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------ACCGCCGGATTCATCTTCTC---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------
>reverse_3186
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------TGGCCGAGTGTTGAT
TCACA---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------
