Multiple sequence alignment - TraesCS5B01G041500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G041500 chr5B 100.000 2420 0 0 1 2420 45708194 45705775 0.000000e+00 4470.0
1 TraesCS5B01G041500 chr5B 95.918 98 3 1 1500 1596 79345739 79345642 8.960000e-35 158.0
2 TraesCS5B01G041500 chr5B 93.243 74 5 0 1064 1137 654898828 654898755 2.540000e-20 110.0
3 TraesCS5B01G041500 chr1D 87.766 1079 89 19 443 1501 50917561 50916506 0.000000e+00 1221.0
4 TraesCS5B01G041500 chr1D 88.889 621 54 9 1599 2208 50916504 50915888 0.000000e+00 750.0
5 TraesCS5B01G041500 chr1D 89.062 128 12 2 2294 2420 382522002 382522128 8.960000e-35 158.0
6 TraesCS5B01G041500 chr1D 95.946 74 3 0 85 158 50917758 50917685 1.180000e-23 121.0
7 TraesCS5B01G041500 chr1D 84.545 110 15 2 2290 2398 407512593 407512701 9.150000e-20 108.0
8 TraesCS5B01G041500 chr1A 82.407 1097 99 37 459 1501 49973928 49972872 0.000000e+00 870.0
9 TraesCS5B01G041500 chr1A 87.225 454 40 12 1771 2208 49972282 49971831 3.590000e-138 501.0
10 TraesCS5B01G041500 chr1A 92.149 242 18 1 205 445 553986997 553987238 8.290000e-90 340.0
11 TraesCS5B01G041500 chr1A 92.208 231 17 1 205 434 562620979 562621209 2.320000e-85 326.0
12 TraesCS5B01G041500 chr1A 89.300 243 24 2 205 446 238677752 238677511 1.090000e-78 303.0
13 TraesCS5B01G041500 chr1A 93.617 94 5 1 1599 1691 49972872 49972779 3.240000e-29 139.0
14 TraesCS5B01G041500 chr2B 92.975 242 15 2 205 445 457730435 457730195 3.830000e-93 351.0
15 TraesCS5B01G041500 chr2B 93.333 105 6 1 1494 1597 397939367 397939471 1.160000e-33 154.0
16 TraesCS5B01G041500 chr6D 92.181 243 18 1 205 446 363243444 363243686 2.300000e-90 342.0
17 TraesCS5B01G041500 chr6D 90.351 114 10 1 1485 1597 448790975 448790862 5.390000e-32 148.0
18 TraesCS5B01G041500 chr6D 83.846 130 17 4 2293 2420 392182870 392182997 1.180000e-23 121.0
19 TraesCS5B01G041500 chr5D 90.377 239 21 2 209 445 15660888 15661126 1.810000e-81 313.0
20 TraesCS5B01G041500 chr5D 87.597 129 14 2 2293 2420 310013558 310013685 5.390000e-32 148.0
21 TraesCS5B01G041500 chr7D 89.344 244 24 2 204 446 40724859 40724617 3.020000e-79 305.0
22 TraesCS5B01G041500 chr7D 82.090 134 18 5 2290 2420 145739695 145739565 2.540000e-20 110.0
23 TraesCS5B01G041500 chrUn 89.431 246 19 3 203 446 82630591 82630831 1.090000e-78 303.0
24 TraesCS5B01G041500 chr7A 89.431 246 19 3 203 446 85730674 85730434 1.090000e-78 303.0
25 TraesCS5B01G041500 chr3B 94.231 104 5 1 1501 1603 766128276 766128173 8.960000e-35 158.0
26 TraesCS5B01G041500 chr3B 89.655 116 10 2 1483 1597 548551266 548551152 1.940000e-31 147.0
27 TraesCS5B01G041500 chr7B 93.333 105 6 1 1494 1597 421056974 421056870 1.160000e-33 154.0
28 TraesCS5B01G041500 chr7B 94.898 98 4 1 1501 1597 41171705 41171608 4.170000e-33 152.0
29 TraesCS5B01G041500 chr7B 82.443 131 17 5 2293 2420 734701977 734702104 2.540000e-20 110.0
30 TraesCS5B01G041500 chr2D 91.818 110 7 2 2290 2398 116870392 116870500 4.170000e-33 152.0
31 TraesCS5B01G041500 chr4A 91.818 110 5 3 1505 1611 722056973 722057081 1.500000e-32 150.0
32 TraesCS5B01G041500 chr4D 90.517 116 6 5 1501 1614 94883428 94883316 5.390000e-32 148.0
33 TraesCS5B01G041500 chr4D 100.000 28 0 0 2262 2289 30848829 30848856 4.000000e-03 52.8
34 TraesCS5B01G041500 chr1B 91.262 103 5 4 2293 2394 642133900 642133999 1.170000e-28 137.0
35 TraesCS5B01G041500 chr4B 82.308 130 19 4 2293 2420 164542926 164542799 2.540000e-20 110.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G041500 chr5B 45705775 45708194 2419 True 4470.000000 4470 100.000000 1 2420 1 chr5B.!!$R1 2419
1 TraesCS5B01G041500 chr1D 50915888 50917758 1870 True 697.333333 1221 90.867000 85 2208 3 chr1D.!!$R1 2123
2 TraesCS5B01G041500 chr1A 49971831 49973928 2097 True 503.333333 870 87.749667 459 2208 3 chr1A.!!$R2 1749

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
60 61 0.173708 GCACTAGGGTGGACGAAGAG 59.826 60.0 0.00 0.0 43.18 2.85 F
1260 1399 0.255318 CATCTTCTTGCTGGCCTCCT 59.745 55.0 3.32 0.0 0.00 3.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1262 1401 0.033090 TAGCCAGCTCATCATCAGCG 59.967 55.0 0.0 0.00 42.14 5.18 R
2241 2821 0.247185 TAAACCGTGGCCCTCTAACG 59.753 55.0 0.0 2.21 37.07 3.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 2.991250 GGAGCAAAAGGTAGAGCATCA 58.009 47.619 0.00 0.00 37.82 3.07
21 22 3.347216 GGAGCAAAAGGTAGAGCATCAA 58.653 45.455 0.00 0.00 37.82 2.57
22 23 3.376546 GGAGCAAAAGGTAGAGCATCAAG 59.623 47.826 0.00 0.00 37.82 3.02
23 24 4.006319 GAGCAAAAGGTAGAGCATCAAGT 58.994 43.478 0.00 0.00 37.82 3.16
24 25 3.755378 AGCAAAAGGTAGAGCATCAAGTG 59.245 43.478 0.00 0.00 37.82 3.16
25 26 3.119708 GCAAAAGGTAGAGCATCAAGTGG 60.120 47.826 0.00 0.00 37.82 4.00
26 27 3.356529 AAAGGTAGAGCATCAAGTGGG 57.643 47.619 0.00 0.00 37.82 4.61
27 28 2.254152 AGGTAGAGCATCAAGTGGGA 57.746 50.000 0.00 0.00 37.82 4.37
28 29 2.114616 AGGTAGAGCATCAAGTGGGAG 58.885 52.381 0.00 0.00 37.82 4.30
29 30 2.111384 GGTAGAGCATCAAGTGGGAGA 58.889 52.381 0.00 0.00 37.82 3.71
30 31 2.501723 GGTAGAGCATCAAGTGGGAGAA 59.498 50.000 0.00 0.00 37.82 2.87
31 32 2.777832 AGAGCATCAAGTGGGAGAAC 57.222 50.000 0.00 0.00 37.82 3.01
32 33 1.280421 AGAGCATCAAGTGGGAGAACC 59.720 52.381 0.00 0.00 37.82 3.62
33 34 1.680249 GAGCATCAAGTGGGAGAACCC 60.680 57.143 0.00 0.00 46.20 4.11
49 50 4.559502 CCGATTTGGGCACTAGGG 57.440 61.111 0.00 0.00 0.00 3.53
50 51 1.607612 CCGATTTGGGCACTAGGGT 59.392 57.895 0.00 0.00 0.00 4.34
51 52 0.748005 CCGATTTGGGCACTAGGGTG 60.748 60.000 0.00 0.00 45.53 4.61
52 53 0.748005 CGATTTGGGCACTAGGGTGG 60.748 60.000 0.00 0.00 43.18 4.61
53 54 0.623723 GATTTGGGCACTAGGGTGGA 59.376 55.000 0.00 0.00 43.18 4.02
54 55 0.331616 ATTTGGGCACTAGGGTGGAC 59.668 55.000 0.00 0.00 43.18 4.02
55 56 2.119484 TTTGGGCACTAGGGTGGACG 62.119 60.000 0.00 0.00 43.18 4.79
56 57 2.682494 GGGCACTAGGGTGGACGA 60.682 66.667 0.00 0.00 43.18 4.20
57 58 2.288025 GGGCACTAGGGTGGACGAA 61.288 63.158 0.00 0.00 43.18 3.85
58 59 1.218316 GGCACTAGGGTGGACGAAG 59.782 63.158 0.00 0.00 43.18 3.79
59 60 1.255667 GGCACTAGGGTGGACGAAGA 61.256 60.000 0.00 0.00 43.18 2.87
60 61 0.173708 GCACTAGGGTGGACGAAGAG 59.826 60.000 0.00 0.00 43.18 2.85
61 62 1.835494 CACTAGGGTGGACGAAGAGA 58.165 55.000 0.00 0.00 39.59 3.10
62 63 2.168496 CACTAGGGTGGACGAAGAGAA 58.832 52.381 0.00 0.00 39.59 2.87
63 64 2.164624 CACTAGGGTGGACGAAGAGAAG 59.835 54.545 0.00 0.00 39.59 2.85
64 65 2.225066 ACTAGGGTGGACGAAGAGAAGT 60.225 50.000 0.00 0.00 0.00 3.01
65 66 1.258676 AGGGTGGACGAAGAGAAGTC 58.741 55.000 0.00 0.00 36.70 3.01
69 70 1.153804 GGACGAAGAGAAGTCCGGC 60.154 63.158 0.00 0.00 46.08 6.13
70 71 1.153804 GACGAAGAGAAGTCCGGCC 60.154 63.158 0.00 0.00 0.00 6.13
71 72 1.874345 GACGAAGAGAAGTCCGGCCA 61.874 60.000 2.24 0.00 0.00 5.36
72 73 1.258445 ACGAAGAGAAGTCCGGCCAT 61.258 55.000 2.24 0.00 0.00 4.40
73 74 0.807667 CGAAGAGAAGTCCGGCCATG 60.808 60.000 2.24 0.00 0.00 3.66
74 75 1.078143 AAGAGAAGTCCGGCCATGC 60.078 57.895 2.24 0.00 0.00 4.06
75 76 1.841302 AAGAGAAGTCCGGCCATGCA 61.841 55.000 2.24 0.00 0.00 3.96
76 77 1.817099 GAGAAGTCCGGCCATGCAG 60.817 63.158 2.24 0.00 0.00 4.41
77 78 2.244117 GAGAAGTCCGGCCATGCAGA 62.244 60.000 2.24 0.00 0.00 4.26
78 79 2.045926 AAGTCCGGCCATGCAGAC 60.046 61.111 2.24 0.83 34.85 3.51
79 80 2.527951 GAAGTCCGGCCATGCAGACT 62.528 60.000 2.24 3.44 42.59 3.24
80 81 2.045926 GTCCGGCCATGCAGACTT 60.046 61.111 2.24 0.00 32.89 3.01
81 82 2.046023 TCCGGCCATGCAGACTTG 60.046 61.111 2.24 0.00 0.00 3.16
97 98 4.332543 CAGACTTGCTACAAATTATCGCCA 59.667 41.667 0.00 0.00 0.00 5.69
100 101 1.946768 TGCTACAAATTATCGCCAGGC 59.053 47.619 0.00 0.00 0.00 4.85
142 143 0.601841 ACGGGTTTGGTAAGAGCACG 60.602 55.000 0.00 0.00 0.00 5.34
158 159 1.028330 CACGCCATCTCCTGCACATT 61.028 55.000 0.00 0.00 0.00 2.71
171 206 2.098614 TGCACATTTCCAACACTGTGT 58.901 42.857 7.80 7.80 40.79 3.72
206 285 5.219343 ACTTTACCACCACTTACAGGTAC 57.781 43.478 0.00 0.00 37.23 3.34
207 286 4.903649 ACTTTACCACCACTTACAGGTACT 59.096 41.667 0.00 0.00 37.23 2.73
208 287 5.011431 ACTTTACCACCACTTACAGGTACTC 59.989 44.000 0.00 0.00 37.23 2.59
209 288 2.254508 ACCACCACTTACAGGTACTCC 58.745 52.381 0.00 0.00 37.23 3.85
210 289 1.553704 CCACCACTTACAGGTACTCCC 59.446 57.143 0.00 0.00 37.23 4.30
212 291 2.904434 CACCACTTACAGGTACTCCCTT 59.096 50.000 0.00 0.00 42.73 3.95
213 292 3.056035 CACCACTTACAGGTACTCCCTTC 60.056 52.174 0.00 0.00 42.73 3.46
214 293 2.165845 CCACTTACAGGTACTCCCTTCG 59.834 54.545 0.00 0.00 42.73 3.79
215 294 2.824341 CACTTACAGGTACTCCCTTCGT 59.176 50.000 0.00 0.00 42.73 3.85
216 295 3.257624 CACTTACAGGTACTCCCTTCGTT 59.742 47.826 0.00 0.00 42.73 3.85
217 296 3.899980 ACTTACAGGTACTCCCTTCGTTT 59.100 43.478 0.00 0.00 42.73 3.60
218 297 4.021632 ACTTACAGGTACTCCCTTCGTTTC 60.022 45.833 0.00 0.00 42.73 2.78
219 298 2.606378 ACAGGTACTCCCTTCGTTTCT 58.394 47.619 0.00 0.00 42.73 2.52
220 299 2.970640 ACAGGTACTCCCTTCGTTTCTT 59.029 45.455 0.00 0.00 42.73 2.52
221 300 3.390311 ACAGGTACTCCCTTCGTTTCTTT 59.610 43.478 0.00 0.00 42.73 2.52
222 301 4.141551 ACAGGTACTCCCTTCGTTTCTTTT 60.142 41.667 0.00 0.00 42.73 2.27
223 302 4.820173 CAGGTACTCCCTTCGTTTCTTTTT 59.180 41.667 0.00 0.00 42.73 1.94
224 303 5.993441 CAGGTACTCCCTTCGTTTCTTTTTA 59.007 40.000 0.00 0.00 42.73 1.52
225 304 6.147328 CAGGTACTCCCTTCGTTTCTTTTTAG 59.853 42.308 0.00 0.00 42.73 1.85
226 305 5.994054 GGTACTCCCTTCGTTTCTTTTTAGT 59.006 40.000 0.00 0.00 0.00 2.24
227 306 6.146837 GGTACTCCCTTCGTTTCTTTTTAGTC 59.853 42.308 0.00 0.00 0.00 2.59
228 307 5.926663 ACTCCCTTCGTTTCTTTTTAGTCT 58.073 37.500 0.00 0.00 0.00 3.24
229 308 5.758784 ACTCCCTTCGTTTCTTTTTAGTCTG 59.241 40.000 0.00 0.00 0.00 3.51
230 309 4.514066 TCCCTTCGTTTCTTTTTAGTCTGC 59.486 41.667 0.00 0.00 0.00 4.26
231 310 4.274950 CCCTTCGTTTCTTTTTAGTCTGCA 59.725 41.667 0.00 0.00 0.00 4.41
232 311 5.048713 CCCTTCGTTTCTTTTTAGTCTGCAT 60.049 40.000 0.00 0.00 0.00 3.96
233 312 6.148811 CCCTTCGTTTCTTTTTAGTCTGCATA 59.851 38.462 0.00 0.00 0.00 3.14
234 313 7.148239 CCCTTCGTTTCTTTTTAGTCTGCATAT 60.148 37.037 0.00 0.00 0.00 1.78
235 314 8.879759 CCTTCGTTTCTTTTTAGTCTGCATATA 58.120 33.333 0.00 0.00 0.00 0.86
369 448 9.687210 TTCATACCGTATAGCTTTAGTATTGTG 57.313 33.333 0.00 0.00 0.00 3.33
370 449 9.070179 TCATACCGTATAGCTTTAGTATTGTGA 57.930 33.333 0.00 0.00 0.00 3.58
371 450 9.687210 CATACCGTATAGCTTTAGTATTGTGAA 57.313 33.333 0.00 0.00 0.00 3.18
373 452 8.589335 ACCGTATAGCTTTAGTATTGTGAATG 57.411 34.615 0.00 0.00 0.00 2.67
374 453 8.202137 ACCGTATAGCTTTAGTATTGTGAATGT 58.798 33.333 0.00 0.00 0.00 2.71
375 454 9.042008 CCGTATAGCTTTAGTATTGTGAATGTT 57.958 33.333 0.00 0.00 0.00 2.71
376 455 9.849607 CGTATAGCTTTAGTATTGTGAATGTTG 57.150 33.333 0.00 0.00 0.00 3.33
419 498 9.076596 GTTTGACTTTGACCAAATCTTATATGC 57.923 33.333 0.00 0.00 35.14 3.14
420 499 7.936496 TGACTTTGACCAAATCTTATATGCA 57.064 32.000 0.00 0.00 0.00 3.96
421 500 7.988737 TGACTTTGACCAAATCTTATATGCAG 58.011 34.615 0.00 0.00 0.00 4.41
422 501 7.828717 TGACTTTGACCAAATCTTATATGCAGA 59.171 33.333 0.00 0.00 0.00 4.26
423 502 7.989826 ACTTTGACCAAATCTTATATGCAGAC 58.010 34.615 0.00 0.00 0.00 3.51
424 503 7.831193 ACTTTGACCAAATCTTATATGCAGACT 59.169 33.333 0.00 0.00 0.00 3.24
425 504 9.330063 CTTTGACCAAATCTTATATGCAGACTA 57.670 33.333 0.00 0.00 0.00 2.59
426 505 9.679661 TTTGACCAAATCTTATATGCAGACTAA 57.320 29.630 0.00 0.00 0.00 2.24
427 506 9.679661 TTGACCAAATCTTATATGCAGACTAAA 57.320 29.630 0.00 0.00 0.00 1.85
428 507 9.679661 TGACCAAATCTTATATGCAGACTAAAA 57.320 29.630 0.00 0.00 0.00 1.52
436 515 8.879759 TCTTATATGCAGACTAAAAAGAAACGG 58.120 33.333 0.00 0.00 0.00 4.44
437 516 8.780846 TTATATGCAGACTAAAAAGAAACGGA 57.219 30.769 0.00 0.00 0.00 4.69
438 517 7.681939 ATATGCAGACTAAAAAGAAACGGAA 57.318 32.000 0.00 0.00 0.00 4.30
439 518 5.418310 TGCAGACTAAAAAGAAACGGAAG 57.582 39.130 0.00 0.00 0.00 3.46
440 519 4.274950 TGCAGACTAAAAAGAAACGGAAGG 59.725 41.667 0.00 0.00 0.00 3.46
441 520 4.514066 GCAGACTAAAAAGAAACGGAAGGA 59.486 41.667 0.00 0.00 0.00 3.36
442 521 5.334182 GCAGACTAAAAAGAAACGGAAGGAG 60.334 44.000 0.00 0.00 0.00 3.69
443 522 5.758784 CAGACTAAAAAGAAACGGAAGGAGT 59.241 40.000 0.00 0.00 0.00 3.85
444 523 6.927381 CAGACTAAAAAGAAACGGAAGGAGTA 59.073 38.462 0.00 0.00 0.00 2.59
445 524 6.927936 AGACTAAAAAGAAACGGAAGGAGTAC 59.072 38.462 0.00 0.00 0.00 2.73
454 533 2.092753 ACGGAAGGAGTACGTGGATAGA 60.093 50.000 0.00 0.00 39.64 1.98
473 555 7.103641 GGATAGATTGTTACAGGTTCAACTCA 58.896 38.462 0.00 0.00 0.00 3.41
500 582 5.067283 TGTTTGCACCTTCTCTAAGTTTTCC 59.933 40.000 0.00 0.00 0.00 3.13
511 593 6.601332 TCTCTAAGTTTTCCCACAAACAGAT 58.399 36.000 0.00 0.00 38.86 2.90
540 623 3.454375 CTGACCTACAGTTTTCACACGT 58.546 45.455 0.00 0.00 41.30 4.49
622 713 3.058224 GGTTAAAGACAGACACCATGCAC 60.058 47.826 0.00 0.00 0.00 4.57
742 835 4.696479 CTAGGATAGCCAGTCCATGTTT 57.304 45.455 0.00 0.00 38.25 2.83
747 840 2.496899 AGCCAGTCCATGTTTTCGAT 57.503 45.000 0.00 0.00 0.00 3.59
775 868 9.632807 AAAGAATATTTTTATTGCAACGCACTA 57.367 25.926 0.00 0.00 38.71 2.74
789 882 3.515630 ACGCACTATTGAGATGACACTG 58.484 45.455 0.00 0.00 0.00 3.66
798 891 8.646004 ACTATTGAGATGACACTGCATAACTAT 58.354 33.333 0.00 0.00 0.00 2.12
833 926 1.336887 CCTCACCAGAACACACGTAGG 60.337 57.143 0.00 0.00 0.00 3.18
835 928 1.611977 TCACCAGAACACACGTAGGAG 59.388 52.381 0.00 0.00 0.00 3.69
836 929 1.340248 CACCAGAACACACGTAGGAGT 59.660 52.381 0.00 0.00 0.00 3.85
863 956 1.701031 TTCAACCTCAAGCCGACCCA 61.701 55.000 0.00 0.00 0.00 4.51
869 962 4.697756 CAAGCCGACCCAGCCGAA 62.698 66.667 0.00 0.00 0.00 4.30
877 970 1.876416 CGACCCAGCCGAAAAGAAGAA 60.876 52.381 0.00 0.00 0.00 2.52
879 972 0.523519 CCCAGCCGAAAAGAAGAAGC 59.476 55.000 0.00 0.00 0.00 3.86
880 973 1.238439 CCAGCCGAAAAGAAGAAGCA 58.762 50.000 0.00 0.00 0.00 3.91
881 974 1.198637 CCAGCCGAAAAGAAGAAGCAG 59.801 52.381 0.00 0.00 0.00 4.24
882 975 1.198637 CAGCCGAAAAGAAGAAGCAGG 59.801 52.381 0.00 0.00 0.00 4.85
884 977 1.238439 CCGAAAAGAAGAAGCAGGCA 58.762 50.000 0.00 0.00 0.00 4.75
934 1033 0.467804 ACAAACCCCACCAATTGTGC 59.532 50.000 4.43 0.00 44.01 4.57
953 1055 2.653766 CGTGCGTGTTTTGCCACC 60.654 61.111 0.00 0.00 31.47 4.61
1005 1120 5.591877 CCTTGTCCTCCTTAATTTCATGAGG 59.408 44.000 0.00 0.00 43.21 3.86
1043 1158 3.604582 GGATGACAAGCAGTTTAGCTCT 58.395 45.455 0.00 0.00 45.89 4.09
1044 1159 4.006319 GGATGACAAGCAGTTTAGCTCTT 58.994 43.478 0.00 0.00 45.89 2.85
1159 1289 4.077184 GCACCATCGACCCCGTCA 62.077 66.667 0.00 0.00 37.05 4.35
1226 1359 2.711009 ACCAGTCCAAGACCATGAAGAA 59.289 45.455 0.00 0.00 32.18 2.52
1227 1360 3.138283 ACCAGTCCAAGACCATGAAGAAA 59.862 43.478 0.00 0.00 32.18 2.52
1231 1370 2.749076 TCCAAGACCATGAAGAAATGCG 59.251 45.455 0.00 0.00 0.00 4.73
1260 1399 0.255318 CATCTTCTTGCTGGCCTCCT 59.745 55.000 3.32 0.00 0.00 3.69
1262 1401 1.077858 CTTCTTGCTGGCCTCCTCC 60.078 63.158 3.32 0.00 0.00 4.30
1263 1402 2.866085 CTTCTTGCTGGCCTCCTCCG 62.866 65.000 3.32 0.00 0.00 4.63
1271 1410 2.515071 GGCCTCCTCCGCTGATGAT 61.515 63.158 0.00 0.00 0.00 2.45
1292 1431 2.093288 TGAGCTGGCTAAACATCAGGAG 60.093 50.000 0.00 0.00 0.00 3.69
1293 1432 1.211457 AGCTGGCTAAACATCAGGAGG 59.789 52.381 0.00 0.00 0.00 4.30
1294 1433 1.673168 CTGGCTAAACATCAGGAGGC 58.327 55.000 0.00 0.00 35.18 4.70
1295 1434 0.107703 TGGCTAAACATCAGGAGGCG 60.108 55.000 0.00 0.00 37.30 5.52
1298 1437 0.107703 CTAAACATCAGGAGGCGCCA 60.108 55.000 31.54 7.75 40.02 5.69
1324 1463 3.010767 GTGCAGTCGCGACAACAA 58.989 55.556 37.85 19.27 42.97 2.83
1327 1466 2.551270 CAGTCGCGACAACAAGCC 59.449 61.111 37.85 11.54 0.00 4.35
1329 1468 1.956170 AGTCGCGACAACAAGCCTG 60.956 57.895 37.85 0.00 0.00 4.85
1423 1568 1.342174 TGGACCGTTGGAACTAGTGTC 59.658 52.381 0.00 0.00 0.00 3.67
1424 1569 1.617357 GGACCGTTGGAACTAGTGTCT 59.383 52.381 0.00 0.00 0.00 3.41
1449 1594 4.179298 ACGCCTAGTTAAAAGGTCGATTC 58.821 43.478 19.38 0.00 37.21 2.52
1452 1597 4.331992 GCCTAGTTAAAAGGTCGATTCACC 59.668 45.833 6.91 0.00 36.43 4.02
1457 1602 0.899720 AAAGGTCGATTCACCGGCTA 59.100 50.000 0.00 0.00 41.90 3.93
1458 1603 0.460311 AAGGTCGATTCACCGGCTAG 59.540 55.000 0.00 0.00 41.90 3.42
1459 1604 1.591863 GGTCGATTCACCGGCTAGC 60.592 63.158 6.04 6.04 34.15 3.42
1460 1605 1.437986 GTCGATTCACCGGCTAGCT 59.562 57.895 15.72 0.00 0.00 3.32
1492 1637 1.066454 CCCTTTCCCGTGTTGTTTGAC 59.934 52.381 0.00 0.00 0.00 3.18
1497 1642 5.646360 CCTTTCCCGTGTTGTTTGACTATAT 59.354 40.000 0.00 0.00 0.00 0.86
1501 1646 8.618702 TTCCCGTGTTGTTTGACTATATTTTA 57.381 30.769 0.00 0.00 0.00 1.52
1502 1647 8.031848 TCCCGTGTTGTTTGACTATATTTTAC 57.968 34.615 0.00 0.00 0.00 2.01
1503 1648 7.879160 TCCCGTGTTGTTTGACTATATTTTACT 59.121 33.333 0.00 0.00 0.00 2.24
1504 1649 8.173130 CCCGTGTTGTTTGACTATATTTTACTC 58.827 37.037 0.00 0.00 0.00 2.59
1505 1650 8.173130 CCGTGTTGTTTGACTATATTTTACTCC 58.827 37.037 0.00 0.00 0.00 3.85
1506 1651 8.932791 CGTGTTGTTTGACTATATTTTACTCCT 58.067 33.333 0.00 0.00 0.00 3.69
1508 1653 9.444600 TGTTGTTTGACTATATTTTACTCCTCC 57.555 33.333 0.00 0.00 0.00 4.30
1509 1654 9.444600 GTTGTTTGACTATATTTTACTCCTCCA 57.555 33.333 0.00 0.00 0.00 3.86
1511 1656 9.832445 TGTTTGACTATATTTTACTCCTCCATC 57.168 33.333 0.00 0.00 0.00 3.51
1512 1657 9.274206 GTTTGACTATATTTTACTCCTCCATCC 57.726 37.037 0.00 0.00 0.00 3.51
1513 1658 7.554959 TGACTATATTTTACTCCTCCATCCC 57.445 40.000 0.00 0.00 0.00 3.85
1514 1659 7.079700 TGACTATATTTTACTCCTCCATCCCA 58.920 38.462 0.00 0.00 0.00 4.37
1515 1660 7.570982 TGACTATATTTTACTCCTCCATCCCAA 59.429 37.037 0.00 0.00 0.00 4.12
1516 1661 8.344939 ACTATATTTTACTCCTCCATCCCAAA 57.655 34.615 0.00 0.00 0.00 3.28
1517 1662 8.787818 ACTATATTTTACTCCTCCATCCCAAAA 58.212 33.333 0.00 0.00 0.00 2.44
1518 1663 9.813826 CTATATTTTACTCCTCCATCCCAAAAT 57.186 33.333 0.00 0.00 0.00 1.82
1521 1666 7.954666 TTTTACTCCTCCATCCCAAAATAAG 57.045 36.000 0.00 0.00 0.00 1.73
1522 1667 6.652205 TTACTCCTCCATCCCAAAATAAGT 57.348 37.500 0.00 0.00 0.00 2.24
1523 1668 4.860022 ACTCCTCCATCCCAAAATAAGTG 58.140 43.478 0.00 0.00 0.00 3.16
1524 1669 4.292306 ACTCCTCCATCCCAAAATAAGTGT 59.708 41.667 0.00 0.00 0.00 3.55
1525 1670 4.855340 TCCTCCATCCCAAAATAAGTGTC 58.145 43.478 0.00 0.00 0.00 3.67
1526 1671 4.540099 TCCTCCATCCCAAAATAAGTGTCT 59.460 41.667 0.00 0.00 0.00 3.41
1527 1672 5.015178 TCCTCCATCCCAAAATAAGTGTCTT 59.985 40.000 0.00 0.00 0.00 3.01
1528 1673 5.126061 CCTCCATCCCAAAATAAGTGTCTTG 59.874 44.000 0.00 0.00 0.00 3.02
1529 1674 5.886609 TCCATCCCAAAATAAGTGTCTTGA 58.113 37.500 0.00 0.00 0.00 3.02
1530 1675 5.945784 TCCATCCCAAAATAAGTGTCTTGAG 59.054 40.000 0.00 0.00 0.00 3.02
1531 1676 5.393461 CCATCCCAAAATAAGTGTCTTGAGC 60.393 44.000 0.00 0.00 0.00 4.26
1532 1677 4.985538 TCCCAAAATAAGTGTCTTGAGCT 58.014 39.130 0.00 0.00 0.00 4.09
1533 1678 5.385198 TCCCAAAATAAGTGTCTTGAGCTT 58.615 37.500 0.00 0.00 0.00 3.74
1534 1679 6.539173 TCCCAAAATAAGTGTCTTGAGCTTA 58.461 36.000 0.00 0.00 0.00 3.09
1535 1680 6.655003 TCCCAAAATAAGTGTCTTGAGCTTAG 59.345 38.462 0.00 0.00 0.00 2.18
1536 1681 6.431234 CCCAAAATAAGTGTCTTGAGCTTAGT 59.569 38.462 0.00 0.00 0.00 2.24
1537 1682 7.606456 CCCAAAATAAGTGTCTTGAGCTTAGTA 59.394 37.037 0.00 0.00 0.00 1.82
1538 1683 8.443937 CCAAAATAAGTGTCTTGAGCTTAGTAC 58.556 37.037 0.00 0.00 0.00 2.73
1539 1684 8.988934 CAAAATAAGTGTCTTGAGCTTAGTACA 58.011 33.333 0.00 0.00 0.00 2.90
1540 1685 9.555727 AAAATAAGTGTCTTGAGCTTAGTACAA 57.444 29.630 0.00 0.00 0.00 2.41
1541 1686 9.555727 AAATAAGTGTCTTGAGCTTAGTACAAA 57.444 29.630 0.00 0.00 0.00 2.83
1542 1687 9.726438 AATAAGTGTCTTGAGCTTAGTACAAAT 57.274 29.630 0.00 0.00 0.00 2.32
1543 1688 9.726438 ATAAGTGTCTTGAGCTTAGTACAAATT 57.274 29.630 0.00 0.00 0.00 1.82
1544 1689 8.451908 AAGTGTCTTGAGCTTAGTACAAATTT 57.548 30.769 0.00 0.00 0.00 1.82
1545 1690 7.865707 AGTGTCTTGAGCTTAGTACAAATTTG 58.134 34.615 16.67 16.67 0.00 2.32
1546 1691 7.499232 AGTGTCTTGAGCTTAGTACAAATTTGT 59.501 33.333 25.99 25.99 44.86 2.83
1547 1692 8.770828 GTGTCTTGAGCTTAGTACAAATTTGTA 58.229 33.333 23.91 23.91 42.35 2.41
1573 1718 9.857957 ACTAGAGCTAATACAAAGTTAAGACAC 57.142 33.333 0.00 0.00 0.00 3.67
1583 1728 7.745620 ACAAAGTTAAGACACTTATTCTGGG 57.254 36.000 0.00 0.00 35.87 4.45
1584 1729 7.514721 ACAAAGTTAAGACACTTATTCTGGGA 58.485 34.615 0.00 0.00 35.87 4.37
1585 1730 8.164070 ACAAAGTTAAGACACTTATTCTGGGAT 58.836 33.333 0.00 0.00 35.87 3.85
1586 1731 8.454106 CAAAGTTAAGACACTTATTCTGGGATG 58.546 37.037 0.00 0.00 35.87 3.51
1587 1732 6.653989 AGTTAAGACACTTATTCTGGGATGG 58.346 40.000 0.00 0.00 0.00 3.51
1588 1733 6.443849 AGTTAAGACACTTATTCTGGGATGGA 59.556 38.462 0.00 0.00 0.00 3.41
1589 1734 5.365021 AAGACACTTATTCTGGGATGGAG 57.635 43.478 0.00 0.00 0.00 3.86
1590 1735 3.713764 AGACACTTATTCTGGGATGGAGG 59.286 47.826 0.00 0.00 0.00 4.30
1591 1736 2.780010 ACACTTATTCTGGGATGGAGGG 59.220 50.000 0.00 0.00 0.00 4.30
1592 1737 3.048600 CACTTATTCTGGGATGGAGGGA 58.951 50.000 0.00 0.00 0.00 4.20
1593 1738 3.072184 CACTTATTCTGGGATGGAGGGAG 59.928 52.174 0.00 0.00 0.00 4.30
1594 1739 3.311702 ACTTATTCTGGGATGGAGGGAGT 60.312 47.826 0.00 0.00 0.00 3.85
1595 1740 4.077982 ACTTATTCTGGGATGGAGGGAGTA 60.078 45.833 0.00 0.00 0.00 2.59
1596 1741 3.663298 ATTCTGGGATGGAGGGAGTAT 57.337 47.619 0.00 0.00 0.00 2.12
1597 1742 2.704190 TCTGGGATGGAGGGAGTATC 57.296 55.000 0.00 0.00 0.00 2.24
1603 1748 4.658901 TGGGATGGAGGGAGTATCTTTTAC 59.341 45.833 0.00 0.00 33.73 2.01
1650 1795 8.147704 TGAGTGGTACATATATATTGTGGTGTG 58.852 37.037 0.00 0.00 44.52 3.82
1695 1917 7.424803 TCATTTCTGTGGTTAAATTCTGTGTG 58.575 34.615 0.00 0.00 0.00 3.82
1702 1924 8.006298 TGTGGTTAAATTCTGTGTGATTTTCT 57.994 30.769 0.00 0.00 32.55 2.52
1756 1978 5.841237 TGTTTTGACTTTGGGGGATCAATAA 59.159 36.000 0.00 0.00 31.45 1.40
1803 2366 4.634199 CCTTTTTCCTGCATGATTGTGTT 58.366 39.130 0.00 0.00 0.00 3.32
1825 2391 7.610305 GTGTTTAATCATACTCTGGGGAAGAAA 59.390 37.037 0.00 0.00 33.37 2.52
1830 2396 0.332972 ACTCTGGGGAAGAAATGGGC 59.667 55.000 0.00 0.00 33.37 5.36
1831 2397 0.627986 CTCTGGGGAAGAAATGGGCT 59.372 55.000 0.00 0.00 33.37 5.19
1851 2417 7.161404 TGGGCTTAGCATAACAAGATATACTG 58.839 38.462 6.53 0.00 0.00 2.74
1908 2480 2.290577 ACAAAGTCAGAAGGAGGATGGC 60.291 50.000 0.00 0.00 0.00 4.40
1919 2493 1.210478 GGAGGATGGCAGAAAGCTACA 59.790 52.381 0.00 0.00 44.79 2.74
1954 2528 3.689161 TCTCATGTAGTTTTCCCATTGCG 59.311 43.478 0.00 0.00 0.00 4.85
1960 2534 1.173913 GTTTTCCCATTGCGCTACCT 58.826 50.000 9.73 0.00 0.00 3.08
1989 2563 8.357402 GCCAAGATACTTTTGGAGTTTAAGAAA 58.643 33.333 8.13 0.00 46.42 2.52
2019 2593 9.565213 GATAAAAACTCTCATTTGGTTCAGATG 57.435 33.333 0.00 0.00 0.00 2.90
2028 2602 7.286546 TCTCATTTGGTTCAGATGTTGGTTTTA 59.713 33.333 0.00 0.00 29.67 1.52
2105 2680 1.742831 TGCAGCTGAACGAAACAAAGT 59.257 42.857 20.43 0.00 0.00 2.66
2127 2702 9.979578 AAAGTTGTTATTCTTGATATTGCAACA 57.020 25.926 0.00 0.00 34.17 3.33
2130 2705 9.357652 GTTGTTATTCTTGATATTGCAACATGT 57.642 29.630 0.00 0.00 33.19 3.21
2164 2742 7.446319 CCCAAATTATTACTGCAGATCAGATGA 59.554 37.037 23.35 3.85 45.72 2.92
2173 2751 7.406031 ACTGCAGATCAGATGAATGAAATTT 57.594 32.000 23.35 0.00 45.72 1.82
2174 2752 7.258441 ACTGCAGATCAGATGAATGAAATTTG 58.742 34.615 23.35 0.00 45.72 2.32
2190 2768 9.991906 AATGAAATTTGGAAGCATATAATGGAG 57.008 29.630 0.00 0.00 26.74 3.86
2208 2788 2.939103 GGAGACTGCGTTTGATAGCATT 59.061 45.455 0.00 0.00 42.95 3.56
2209 2789 3.242543 GGAGACTGCGTTTGATAGCATTG 60.243 47.826 0.00 0.00 42.95 2.82
2210 2790 3.338249 AGACTGCGTTTGATAGCATTGT 58.662 40.909 0.00 0.00 42.95 2.71
2211 2791 4.503910 AGACTGCGTTTGATAGCATTGTA 58.496 39.130 0.00 0.00 42.95 2.41
2212 2792 4.935205 AGACTGCGTTTGATAGCATTGTAA 59.065 37.500 0.00 0.00 42.95 2.41
2213 2793 5.411361 AGACTGCGTTTGATAGCATTGTAAA 59.589 36.000 0.00 0.00 42.95 2.01
2214 2794 5.390613 ACTGCGTTTGATAGCATTGTAAAC 58.609 37.500 0.00 0.00 42.95 2.01
2215 2795 5.181245 ACTGCGTTTGATAGCATTGTAAACT 59.819 36.000 0.00 0.00 42.95 2.66
2216 2796 6.007936 TGCGTTTGATAGCATTGTAAACTT 57.992 33.333 0.00 0.00 38.59 2.66
2217 2797 6.442952 TGCGTTTGATAGCATTGTAAACTTT 58.557 32.000 0.00 0.00 38.59 2.66
2218 2798 6.362016 TGCGTTTGATAGCATTGTAAACTTTG 59.638 34.615 0.00 0.00 38.59 2.77
2219 2799 6.580791 GCGTTTGATAGCATTGTAAACTTTGA 59.419 34.615 0.00 0.00 0.00 2.69
2220 2800 7.273381 GCGTTTGATAGCATTGTAAACTTTGAT 59.727 33.333 0.00 0.00 0.00 2.57
2221 2801 9.767684 CGTTTGATAGCATTGTAAACTTTGATA 57.232 29.630 0.00 0.00 0.00 2.15
2224 2804 9.461312 TTGATAGCATTGTAAACTTTGATAGGT 57.539 29.630 0.00 0.00 0.00 3.08
2225 2805 8.892723 TGATAGCATTGTAAACTTTGATAGGTG 58.107 33.333 0.00 0.00 0.00 4.00
2226 2806 8.807948 ATAGCATTGTAAACTTTGATAGGTGT 57.192 30.769 0.00 0.00 0.00 4.16
2227 2807 9.899661 ATAGCATTGTAAACTTTGATAGGTGTA 57.100 29.630 0.00 0.00 0.00 2.90
2228 2808 8.630054 AGCATTGTAAACTTTGATAGGTGTAA 57.370 30.769 0.00 0.00 0.00 2.41
2229 2809 8.730680 AGCATTGTAAACTTTGATAGGTGTAAG 58.269 33.333 0.00 0.00 0.00 2.34
2230 2810 8.512138 GCATTGTAAACTTTGATAGGTGTAAGT 58.488 33.333 0.00 0.00 32.52 2.24
2231 2811 9.825972 CATTGTAAACTTTGATAGGTGTAAGTG 57.174 33.333 0.00 0.00 31.64 3.16
2232 2812 8.967664 TTGTAAACTTTGATAGGTGTAAGTGT 57.032 30.769 0.00 0.00 31.64 3.55
2234 2814 9.480053 TGTAAACTTTGATAGGTGTAAGTGTAC 57.520 33.333 0.00 0.00 39.83 2.90
2235 2815 9.702494 GTAAACTTTGATAGGTGTAAGTGTACT 57.298 33.333 0.00 0.00 37.90 2.73
2237 2817 9.702494 AAACTTTGATAGGTGTAAGTGTACTAC 57.298 33.333 0.00 0.00 31.64 2.73
2238 2818 7.834803 ACTTTGATAGGTGTAAGTGTACTACC 58.165 38.462 0.00 0.00 34.32 3.18
2239 2819 6.780457 TTGATAGGTGTAAGTGTACTACCC 57.220 41.667 0.00 0.00 34.49 3.69
2240 2820 6.083487 TGATAGGTGTAAGTGTACTACCCT 57.917 41.667 0.00 1.16 34.49 4.34
2241 2821 6.125029 TGATAGGTGTAAGTGTACTACCCTC 58.875 44.000 0.00 0.00 34.49 4.30
2242 2822 3.350833 AGGTGTAAGTGTACTACCCTCG 58.649 50.000 0.00 0.00 34.49 4.63
2243 2823 3.084786 GGTGTAAGTGTACTACCCTCGT 58.915 50.000 0.00 0.00 30.91 4.18
2244 2824 3.507622 GGTGTAAGTGTACTACCCTCGTT 59.492 47.826 0.00 0.00 30.91 3.85
2245 2825 4.700213 GGTGTAAGTGTACTACCCTCGTTA 59.300 45.833 0.00 0.00 30.91 3.18
2246 2826 5.163713 GGTGTAAGTGTACTACCCTCGTTAG 60.164 48.000 0.00 0.00 30.91 2.34
2247 2827 5.643777 GTGTAAGTGTACTACCCTCGTTAGA 59.356 44.000 0.00 0.00 0.00 2.10
2248 2828 5.877012 TGTAAGTGTACTACCCTCGTTAGAG 59.123 44.000 0.00 0.00 43.98 2.43
2256 2836 2.494918 CTCGTTAGAGGGCCACGG 59.505 66.667 13.34 2.11 40.75 4.94
2257 2837 2.283388 TCGTTAGAGGGCCACGGT 60.283 61.111 13.34 0.00 34.61 4.83
2258 2838 1.885163 CTCGTTAGAGGGCCACGGTT 61.885 60.000 13.34 0.00 40.75 4.44
2259 2839 1.004200 CGTTAGAGGGCCACGGTTT 60.004 57.895 6.18 0.00 0.00 3.27
2260 2840 0.247185 CGTTAGAGGGCCACGGTTTA 59.753 55.000 6.18 0.00 0.00 2.01
2261 2841 1.134610 CGTTAGAGGGCCACGGTTTAT 60.135 52.381 6.18 0.00 0.00 1.40
2262 2842 2.101249 CGTTAGAGGGCCACGGTTTATA 59.899 50.000 6.18 0.00 0.00 0.98
2263 2843 3.243975 CGTTAGAGGGCCACGGTTTATAT 60.244 47.826 6.18 0.00 0.00 0.86
2264 2844 4.022068 CGTTAGAGGGCCACGGTTTATATA 60.022 45.833 6.18 0.00 0.00 0.86
2265 2845 5.337009 CGTTAGAGGGCCACGGTTTATATAT 60.337 44.000 6.18 0.00 0.00 0.86
2266 2846 6.470278 GTTAGAGGGCCACGGTTTATATATT 58.530 40.000 6.18 0.00 0.00 1.28
2267 2847 4.906618 AGAGGGCCACGGTTTATATATTG 58.093 43.478 6.18 0.00 0.00 1.90
2268 2848 4.595781 AGAGGGCCACGGTTTATATATTGA 59.404 41.667 6.18 0.00 0.00 2.57
2269 2849 5.250774 AGAGGGCCACGGTTTATATATTGAT 59.749 40.000 6.18 0.00 0.00 2.57
2270 2850 5.887754 AGGGCCACGGTTTATATATTGATT 58.112 37.500 6.18 0.00 0.00 2.57
2271 2851 5.710099 AGGGCCACGGTTTATATATTGATTG 59.290 40.000 6.18 0.00 0.00 2.67
2272 2852 5.105917 GGGCCACGGTTTATATATTGATTGG 60.106 44.000 4.39 0.00 0.00 3.16
2273 2853 5.708230 GGCCACGGTTTATATATTGATTGGA 59.292 40.000 0.00 0.00 0.00 3.53
2274 2854 6.349033 GGCCACGGTTTATATATTGATTGGAC 60.349 42.308 0.00 0.00 0.00 4.02
2275 2855 6.619874 GCCACGGTTTATATATTGATTGGACG 60.620 42.308 0.00 0.00 0.00 4.79
2276 2856 6.128391 CCACGGTTTATATATTGATTGGACGG 60.128 42.308 0.00 0.00 0.00 4.79
2277 2857 5.935789 ACGGTTTATATATTGATTGGACGGG 59.064 40.000 0.00 0.00 0.00 5.28
2278 2858 5.353123 CGGTTTATATATTGATTGGACGGGG 59.647 44.000 0.00 0.00 0.00 5.73
2279 2859 5.124936 GGTTTATATATTGATTGGACGGGGC 59.875 44.000 0.00 0.00 0.00 5.80
2280 2860 5.772393 TTATATATTGATTGGACGGGGCT 57.228 39.130 0.00 0.00 0.00 5.19
2281 2861 4.657814 ATATATTGATTGGACGGGGCTT 57.342 40.909 0.00 0.00 0.00 4.35
2282 2862 5.772393 ATATATTGATTGGACGGGGCTTA 57.228 39.130 0.00 0.00 0.00 3.09
2283 2863 4.657814 ATATTGATTGGACGGGGCTTAT 57.342 40.909 0.00 0.00 0.00 1.73
2284 2864 2.341846 TTGATTGGACGGGGCTTATC 57.658 50.000 0.00 0.00 0.00 1.75
2285 2865 0.472471 TGATTGGACGGGGCTTATCC 59.528 55.000 0.00 0.00 0.00 2.59
2295 2875 1.006454 GGCTTATCCCGTAGACCGC 60.006 63.158 0.00 0.00 34.38 5.68
2296 2876 1.006454 GCTTATCCCGTAGACCGCC 60.006 63.158 0.00 0.00 34.38 6.13
2297 2877 1.285023 CTTATCCCGTAGACCGCCG 59.715 63.158 0.00 0.00 34.38 6.46
2298 2878 2.138656 CTTATCCCGTAGACCGCCGG 62.139 65.000 0.00 0.00 43.82 6.13
2302 2882 4.280494 CCGTAGACCGCCGGGATG 62.280 72.222 8.57 0.00 40.54 3.51
2303 2883 3.214123 CGTAGACCGCCGGGATGA 61.214 66.667 8.57 0.00 36.97 2.92
2304 2884 2.561956 CGTAGACCGCCGGGATGAT 61.562 63.158 8.57 0.00 36.97 2.45
2305 2885 1.006102 GTAGACCGCCGGGATGATG 60.006 63.158 8.57 0.00 36.97 3.07
2306 2886 1.152631 TAGACCGCCGGGATGATGA 60.153 57.895 8.57 0.00 36.97 2.92
2307 2887 0.757561 TAGACCGCCGGGATGATGAA 60.758 55.000 8.57 0.00 36.97 2.57
2308 2888 1.595382 GACCGCCGGGATGATGAAG 60.595 63.158 8.57 0.00 36.97 3.02
2309 2889 2.028125 GACCGCCGGGATGATGAAGA 62.028 60.000 8.57 0.00 36.97 2.87
2310 2890 1.372683 CCGCCGGGATGATGAAGAT 59.627 57.895 2.18 0.00 34.06 2.40
2311 2891 0.952497 CCGCCGGGATGATGAAGATG 60.952 60.000 2.18 0.00 34.06 2.90
2312 2892 0.952497 CGCCGGGATGATGAAGATGG 60.952 60.000 2.18 0.00 0.00 3.51
2313 2893 0.397941 GCCGGGATGATGAAGATGGA 59.602 55.000 2.18 0.00 0.00 3.41
2314 2894 1.879796 GCCGGGATGATGAAGATGGAC 60.880 57.143 2.18 0.00 0.00 4.02
2315 2895 1.696336 CCGGGATGATGAAGATGGACT 59.304 52.381 0.00 0.00 0.00 3.85
2316 2896 2.289320 CCGGGATGATGAAGATGGACTC 60.289 54.545 0.00 0.00 0.00 3.36
2317 2897 2.289320 CGGGATGATGAAGATGGACTCC 60.289 54.545 0.00 0.00 0.00 3.85
2318 2898 2.289320 GGGATGATGAAGATGGACTCCG 60.289 54.545 0.00 0.00 0.00 4.63
2319 2899 2.289320 GGATGATGAAGATGGACTCCGG 60.289 54.545 0.00 0.00 0.00 5.14
2320 2900 1.866015 TGATGAAGATGGACTCCGGT 58.134 50.000 0.00 0.00 0.00 5.28
2321 2901 1.757118 TGATGAAGATGGACTCCGGTC 59.243 52.381 0.00 0.00 41.43 4.79
2322 2902 1.757118 GATGAAGATGGACTCCGGTCA 59.243 52.381 0.00 0.00 43.77 4.02
2323 2903 1.866015 TGAAGATGGACTCCGGTCAT 58.134 50.000 0.00 1.52 43.77 3.06
2324 2904 1.482182 TGAAGATGGACTCCGGTCATG 59.518 52.381 0.00 0.00 43.77 3.07
2325 2905 1.757118 GAAGATGGACTCCGGTCATGA 59.243 52.381 0.00 0.00 43.77 3.07
2326 2906 2.094100 AGATGGACTCCGGTCATGAT 57.906 50.000 0.00 0.00 43.77 2.45
2327 2907 2.402564 AGATGGACTCCGGTCATGATT 58.597 47.619 0.00 0.00 43.77 2.57
2328 2908 2.774234 AGATGGACTCCGGTCATGATTT 59.226 45.455 0.00 0.00 43.77 2.17
2329 2909 2.691409 TGGACTCCGGTCATGATTTC 57.309 50.000 0.00 0.00 43.77 2.17
2330 2910 1.209504 TGGACTCCGGTCATGATTTCC 59.790 52.381 0.00 0.00 43.77 3.13
2331 2911 1.475213 GGACTCCGGTCATGATTTCCC 60.475 57.143 0.00 0.00 43.77 3.97
2332 2912 0.546598 ACTCCGGTCATGATTTCCCC 59.453 55.000 0.00 0.00 0.00 4.81
2333 2913 0.839946 CTCCGGTCATGATTTCCCCT 59.160 55.000 0.00 0.00 0.00 4.79
2334 2914 0.837272 TCCGGTCATGATTTCCCCTC 59.163 55.000 0.00 0.00 0.00 4.30
2335 2915 0.839946 CCGGTCATGATTTCCCCTCT 59.160 55.000 0.00 0.00 0.00 3.69
2336 2916 1.202698 CCGGTCATGATTTCCCCTCTC 60.203 57.143 0.00 0.00 0.00 3.20
2337 2917 1.202698 CGGTCATGATTTCCCCTCTCC 60.203 57.143 0.00 0.00 0.00 3.71
2338 2918 1.202698 GGTCATGATTTCCCCTCTCCG 60.203 57.143 0.00 0.00 0.00 4.63
2339 2919 1.131638 TCATGATTTCCCCTCTCCGG 58.868 55.000 0.00 0.00 0.00 5.14
2340 2920 0.536006 CATGATTTCCCCTCTCCGGC 60.536 60.000 0.00 0.00 0.00 6.13
2341 2921 0.988145 ATGATTTCCCCTCTCCGGCA 60.988 55.000 0.00 0.00 0.00 5.69
2342 2922 1.147153 GATTTCCCCTCTCCGGCAG 59.853 63.158 0.00 0.00 0.00 4.85
2343 2923 2.330924 GATTTCCCCTCTCCGGCAGG 62.331 65.000 11.51 11.51 39.46 4.85
2356 2936 3.827634 GCAGGGTGCCGAAATAGG 58.172 61.111 0.00 0.00 37.42 2.57
2369 2949 5.923733 CCGAAATAGGCTCCAGATAGTAT 57.076 43.478 0.00 0.00 0.00 2.12
2370 2950 6.287589 CCGAAATAGGCTCCAGATAGTATT 57.712 41.667 0.00 0.00 0.00 1.89
2371 2951 6.702329 CCGAAATAGGCTCCAGATAGTATTT 58.298 40.000 0.00 0.00 0.00 1.40
2372 2952 6.814146 CCGAAATAGGCTCCAGATAGTATTTC 59.186 42.308 0.00 0.00 35.18 2.17
2373 2953 7.378966 CGAAATAGGCTCCAGATAGTATTTCA 58.621 38.462 11.81 0.00 36.98 2.69
2374 2954 7.872993 CGAAATAGGCTCCAGATAGTATTTCAA 59.127 37.037 11.81 0.00 36.98 2.69
2375 2955 9.561069 GAAATAGGCTCCAGATAGTATTTCAAA 57.439 33.333 0.00 0.00 37.07 2.69
2376 2956 9.566432 AAATAGGCTCCAGATAGTATTTCAAAG 57.434 33.333 0.00 0.00 0.00 2.77
2377 2957 5.934781 AGGCTCCAGATAGTATTTCAAAGG 58.065 41.667 0.00 0.00 0.00 3.11
2378 2958 5.430089 AGGCTCCAGATAGTATTTCAAAGGT 59.570 40.000 0.00 0.00 0.00 3.50
2379 2959 6.615726 AGGCTCCAGATAGTATTTCAAAGGTA 59.384 38.462 0.00 0.00 0.00 3.08
2380 2960 6.706716 GGCTCCAGATAGTATTTCAAAGGTAC 59.293 42.308 0.00 0.00 0.00 3.34
2381 2961 7.272978 GCTCCAGATAGTATTTCAAAGGTACA 58.727 38.462 0.00 0.00 0.00 2.90
2382 2962 7.439655 GCTCCAGATAGTATTTCAAAGGTACAG 59.560 40.741 0.00 0.00 0.00 2.74
2383 2963 8.603898 TCCAGATAGTATTTCAAAGGTACAGA 57.396 34.615 0.00 0.00 0.00 3.41
2384 2964 8.696374 TCCAGATAGTATTTCAAAGGTACAGAG 58.304 37.037 0.00 0.00 0.00 3.35
2385 2965 7.928706 CCAGATAGTATTTCAAAGGTACAGAGG 59.071 40.741 0.00 0.00 0.00 3.69
2386 2966 7.439655 CAGATAGTATTTCAAAGGTACAGAGGC 59.560 40.741 0.00 0.00 0.00 4.70
2387 2967 5.763876 AGTATTTCAAAGGTACAGAGGCT 57.236 39.130 0.00 0.00 0.00 4.58
2388 2968 6.128138 AGTATTTCAAAGGTACAGAGGCTT 57.872 37.500 0.00 0.00 0.00 4.35
2389 2969 5.940470 AGTATTTCAAAGGTACAGAGGCTTG 59.060 40.000 0.00 0.00 0.00 4.01
2390 2970 2.185004 TCAAAGGTACAGAGGCTTGC 57.815 50.000 0.00 0.00 0.00 4.01
2391 2971 0.798776 CAAAGGTACAGAGGCTTGCG 59.201 55.000 0.00 0.00 0.00 4.85
2392 2972 0.321653 AAAGGTACAGAGGCTTGCGG 60.322 55.000 0.00 0.00 0.00 5.69
2393 2973 2.804828 AAGGTACAGAGGCTTGCGGC 62.805 60.000 0.00 0.00 40.90 6.53
2394 2974 3.188786 GTACAGAGGCTTGCGGCG 61.189 66.667 0.51 0.51 42.94 6.46
2395 2975 4.451150 TACAGAGGCTTGCGGCGG 62.451 66.667 9.78 0.00 42.94 6.13
2406 2986 2.504681 GCGGCGGCAAAGTTGATG 60.505 61.111 9.78 0.00 39.62 3.07
2407 2987 2.953821 CGGCGGCAAAGTTGATGT 59.046 55.556 10.53 0.00 0.00 3.06
2408 2988 1.285641 CGGCGGCAAAGTTGATGTT 59.714 52.632 10.53 0.00 0.00 2.71
2409 2989 0.729140 CGGCGGCAAAGTTGATGTTC 60.729 55.000 10.53 0.00 0.00 3.18
2410 2990 0.598065 GGCGGCAAAGTTGATGTTCT 59.402 50.000 3.07 0.00 0.00 3.01
2411 2991 1.810151 GGCGGCAAAGTTGATGTTCTA 59.190 47.619 3.07 0.00 0.00 2.10
2412 2992 2.159517 GGCGGCAAAGTTGATGTTCTAG 60.160 50.000 3.07 0.00 0.00 2.43
2413 2993 2.159517 GCGGCAAAGTTGATGTTCTAGG 60.160 50.000 0.00 0.00 0.00 3.02
2414 2994 2.420022 CGGCAAAGTTGATGTTCTAGGG 59.580 50.000 0.00 0.00 0.00 3.53
2415 2995 3.421844 GGCAAAGTTGATGTTCTAGGGT 58.578 45.455 0.00 0.00 0.00 4.34
2416 2996 3.826729 GGCAAAGTTGATGTTCTAGGGTT 59.173 43.478 0.00 0.00 0.00 4.11
2417 2997 5.007682 GGCAAAGTTGATGTTCTAGGGTTA 58.992 41.667 0.00 0.00 0.00 2.85
2418 2998 5.652452 GGCAAAGTTGATGTTCTAGGGTTAT 59.348 40.000 0.00 0.00 0.00 1.89
2419 2999 6.152831 GGCAAAGTTGATGTTCTAGGGTTATT 59.847 38.462 0.00 0.00 0.00 1.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.991250 TGATGCTCTACCTTTTGCTCC 58.009 47.619 0.00 0.00 0.00 4.70
1 2 4.006319 ACTTGATGCTCTACCTTTTGCTC 58.994 43.478 0.00 0.00 0.00 4.26
2 3 3.755378 CACTTGATGCTCTACCTTTTGCT 59.245 43.478 0.00 0.00 0.00 3.91
3 4 3.119708 CCACTTGATGCTCTACCTTTTGC 60.120 47.826 0.00 0.00 0.00 3.68
4 5 3.441572 CCCACTTGATGCTCTACCTTTTG 59.558 47.826 0.00 0.00 0.00 2.44
5 6 3.330701 TCCCACTTGATGCTCTACCTTTT 59.669 43.478 0.00 0.00 0.00 2.27
6 7 2.912956 TCCCACTTGATGCTCTACCTTT 59.087 45.455 0.00 0.00 0.00 3.11
7 8 2.503356 CTCCCACTTGATGCTCTACCTT 59.497 50.000 0.00 0.00 0.00 3.50
8 9 2.114616 CTCCCACTTGATGCTCTACCT 58.885 52.381 0.00 0.00 0.00 3.08
9 10 2.111384 TCTCCCACTTGATGCTCTACC 58.889 52.381 0.00 0.00 0.00 3.18
10 11 3.526534 GTTCTCCCACTTGATGCTCTAC 58.473 50.000 0.00 0.00 0.00 2.59
11 12 2.501723 GGTTCTCCCACTTGATGCTCTA 59.498 50.000 0.00 0.00 0.00 2.43
12 13 1.280421 GGTTCTCCCACTTGATGCTCT 59.720 52.381 0.00 0.00 0.00 4.09
13 14 1.743996 GGTTCTCCCACTTGATGCTC 58.256 55.000 0.00 0.00 0.00 4.26
14 15 3.965888 GGTTCTCCCACTTGATGCT 57.034 52.632 0.00 0.00 0.00 3.79
32 33 0.748005 CACCCTAGTGCCCAAATCGG 60.748 60.000 0.00 0.00 37.14 4.18
33 34 0.748005 CCACCCTAGTGCCCAAATCG 60.748 60.000 0.00 0.00 43.09 3.34
34 35 0.623723 TCCACCCTAGTGCCCAAATC 59.376 55.000 0.00 0.00 43.09 2.17
35 36 0.331616 GTCCACCCTAGTGCCCAAAT 59.668 55.000 0.00 0.00 43.09 2.32
36 37 1.765074 GTCCACCCTAGTGCCCAAA 59.235 57.895 0.00 0.00 43.09 3.28
37 38 2.589157 CGTCCACCCTAGTGCCCAA 61.589 63.158 0.00 0.00 43.09 4.12
38 39 3.000819 CGTCCACCCTAGTGCCCA 61.001 66.667 0.00 0.00 43.09 5.36
39 40 2.240162 CTTCGTCCACCCTAGTGCCC 62.240 65.000 0.00 0.00 43.09 5.36
40 41 1.218316 CTTCGTCCACCCTAGTGCC 59.782 63.158 0.00 0.00 43.09 5.01
41 42 0.173708 CTCTTCGTCCACCCTAGTGC 59.826 60.000 0.00 0.00 43.09 4.40
42 43 1.835494 TCTCTTCGTCCACCCTAGTG 58.165 55.000 0.00 0.00 44.12 2.74
43 44 2.225066 ACTTCTCTTCGTCCACCCTAGT 60.225 50.000 0.00 0.00 0.00 2.57
44 45 2.424246 GACTTCTCTTCGTCCACCCTAG 59.576 54.545 0.00 0.00 0.00 3.02
45 46 2.444421 GACTTCTCTTCGTCCACCCTA 58.556 52.381 0.00 0.00 0.00 3.53
46 47 1.258676 GACTTCTCTTCGTCCACCCT 58.741 55.000 0.00 0.00 0.00 4.34
47 48 0.246910 GGACTTCTCTTCGTCCACCC 59.753 60.000 3.72 0.00 46.98 4.61
48 49 3.816580 GGACTTCTCTTCGTCCACC 57.183 57.895 3.72 0.00 46.98 4.61
51 52 1.153804 GCCGGACTTCTCTTCGTCC 60.154 63.158 5.05 0.00 44.88 4.79
52 53 1.153804 GGCCGGACTTCTCTTCGTC 60.154 63.158 5.05 0.00 0.00 4.20
53 54 1.258445 ATGGCCGGACTTCTCTTCGT 61.258 55.000 9.82 0.00 0.00 3.85
54 55 0.807667 CATGGCCGGACTTCTCTTCG 60.808 60.000 9.82 0.00 0.00 3.79
55 56 1.092345 GCATGGCCGGACTTCTCTTC 61.092 60.000 9.82 0.00 0.00 2.87
56 57 1.078143 GCATGGCCGGACTTCTCTT 60.078 57.895 9.82 0.00 0.00 2.85
57 58 2.249413 CTGCATGGCCGGACTTCTCT 62.249 60.000 9.82 0.00 0.00 3.10
58 59 1.817099 CTGCATGGCCGGACTTCTC 60.817 63.158 9.82 0.00 0.00 2.87
59 60 2.270205 CTGCATGGCCGGACTTCT 59.730 61.111 9.82 0.00 0.00 2.85
60 61 2.109126 GTCTGCATGGCCGGACTTC 61.109 63.158 9.82 0.00 31.44 3.01
61 62 2.045926 GTCTGCATGGCCGGACTT 60.046 61.111 9.82 0.00 31.44 3.01
62 63 2.596851 AAGTCTGCATGGCCGGACT 61.597 57.895 9.82 8.53 40.29 3.85
63 64 2.045926 AAGTCTGCATGGCCGGAC 60.046 61.111 5.05 0.56 33.17 4.79
64 65 2.046023 CAAGTCTGCATGGCCGGA 60.046 61.111 5.05 0.00 0.00 5.14
74 75 4.332543 TGGCGATAATTTGTAGCAAGTCTG 59.667 41.667 1.18 0.00 0.00 3.51
75 76 4.513442 TGGCGATAATTTGTAGCAAGTCT 58.487 39.130 1.18 0.00 0.00 3.24
76 77 4.260784 CCTGGCGATAATTTGTAGCAAGTC 60.261 45.833 2.81 0.00 0.00 3.01
77 78 3.627577 CCTGGCGATAATTTGTAGCAAGT 59.372 43.478 2.81 0.00 0.00 3.16
78 79 3.548818 GCCTGGCGATAATTTGTAGCAAG 60.549 47.826 1.35 0.00 0.00 4.01
79 80 2.357637 GCCTGGCGATAATTTGTAGCAA 59.642 45.455 1.35 0.00 0.00 3.91
80 81 1.946768 GCCTGGCGATAATTTGTAGCA 59.053 47.619 1.35 0.00 0.00 3.49
81 82 2.688364 GCCTGGCGATAATTTGTAGC 57.312 50.000 1.35 0.00 0.00 3.58
97 98 2.567615 AGAGTAGTTTGTTCCATCGCCT 59.432 45.455 0.00 0.00 0.00 5.52
100 101 4.994852 TGGAAAGAGTAGTTTGTTCCATCG 59.005 41.667 0.00 0.00 42.12 3.84
142 143 0.743097 GGAAATGTGCAGGAGATGGC 59.257 55.000 0.00 0.00 0.00 4.40
171 206 5.172205 GGTGGTAAAGTTTGTCTTTTGCAA 58.828 37.500 0.00 0.00 42.95 4.08
176 211 6.660094 TGTAAGTGGTGGTAAAGTTTGTCTTT 59.340 34.615 0.00 0.00 46.54 2.52
181 216 4.885325 ACCTGTAAGTGGTGGTAAAGTTTG 59.115 41.667 0.00 0.00 36.30 2.93
206 285 5.334182 GCAGACTAAAAAGAAACGAAGGGAG 60.334 44.000 0.00 0.00 0.00 4.30
207 286 4.514066 GCAGACTAAAAAGAAACGAAGGGA 59.486 41.667 0.00 0.00 0.00 4.20
208 287 4.274950 TGCAGACTAAAAAGAAACGAAGGG 59.725 41.667 0.00 0.00 0.00 3.95
209 288 5.418310 TGCAGACTAAAAAGAAACGAAGG 57.582 39.130 0.00 0.00 0.00 3.46
343 422 9.687210 CACAATACTAAAGCTATACGGTATGAA 57.313 33.333 10.86 0.00 0.00 2.57
344 423 9.070179 TCACAATACTAAAGCTATACGGTATGA 57.930 33.333 10.86 0.00 0.00 2.15
345 424 9.687210 TTCACAATACTAAAGCTATACGGTATG 57.313 33.333 10.86 2.67 0.00 2.39
347 426 9.687210 CATTCACAATACTAAAGCTATACGGTA 57.313 33.333 0.00 0.00 0.00 4.02
348 427 8.202137 ACATTCACAATACTAAAGCTATACGGT 58.798 33.333 0.00 0.00 0.00 4.83
349 428 8.589335 ACATTCACAATACTAAAGCTATACGG 57.411 34.615 0.00 0.00 0.00 4.02
350 429 9.849607 CAACATTCACAATACTAAAGCTATACG 57.150 33.333 0.00 0.00 0.00 3.06
393 472 9.076596 GCATATAAGATTTGGTCAAAGTCAAAC 57.923 33.333 2.55 0.00 35.97 2.93
394 473 8.801299 TGCATATAAGATTTGGTCAAAGTCAAA 58.199 29.630 2.55 0.00 37.29 2.69
395 474 8.347004 TGCATATAAGATTTGGTCAAAGTCAA 57.653 30.769 2.55 0.00 33.32 3.18
396 475 7.828717 TCTGCATATAAGATTTGGTCAAAGTCA 59.171 33.333 2.55 0.00 33.32 3.41
397 476 8.125448 GTCTGCATATAAGATTTGGTCAAAGTC 58.875 37.037 2.55 1.51 33.32 3.01
398 477 7.831193 AGTCTGCATATAAGATTTGGTCAAAGT 59.169 33.333 2.55 0.00 33.32 2.66
399 478 8.218338 AGTCTGCATATAAGATTTGGTCAAAG 57.782 34.615 2.55 0.00 33.32 2.77
400 479 9.679661 TTAGTCTGCATATAAGATTTGGTCAAA 57.320 29.630 0.00 0.00 34.46 2.69
401 480 9.679661 TTTAGTCTGCATATAAGATTTGGTCAA 57.320 29.630 0.00 0.00 0.00 3.18
402 481 9.679661 TTTTAGTCTGCATATAAGATTTGGTCA 57.320 29.630 0.00 0.00 0.00 4.02
410 489 8.879759 CCGTTTCTTTTTAGTCTGCATATAAGA 58.120 33.333 0.00 0.00 0.00 2.10
411 490 8.879759 TCCGTTTCTTTTTAGTCTGCATATAAG 58.120 33.333 0.00 0.00 0.00 1.73
412 491 8.780846 TCCGTTTCTTTTTAGTCTGCATATAA 57.219 30.769 0.00 0.00 0.00 0.98
413 492 8.780846 TTCCGTTTCTTTTTAGTCTGCATATA 57.219 30.769 0.00 0.00 0.00 0.86
414 493 7.148239 CCTTCCGTTTCTTTTTAGTCTGCATAT 60.148 37.037 0.00 0.00 0.00 1.78
415 494 6.148811 CCTTCCGTTTCTTTTTAGTCTGCATA 59.851 38.462 0.00 0.00 0.00 3.14
416 495 5.048713 CCTTCCGTTTCTTTTTAGTCTGCAT 60.049 40.000 0.00 0.00 0.00 3.96
417 496 4.274950 CCTTCCGTTTCTTTTTAGTCTGCA 59.725 41.667 0.00 0.00 0.00 4.41
418 497 4.514066 TCCTTCCGTTTCTTTTTAGTCTGC 59.486 41.667 0.00 0.00 0.00 4.26
419 498 5.758784 ACTCCTTCCGTTTCTTTTTAGTCTG 59.241 40.000 0.00 0.00 0.00 3.51
420 499 5.926663 ACTCCTTCCGTTTCTTTTTAGTCT 58.073 37.500 0.00 0.00 0.00 3.24
421 500 6.128982 CGTACTCCTTCCGTTTCTTTTTAGTC 60.129 42.308 0.00 0.00 0.00 2.59
422 501 5.693555 CGTACTCCTTCCGTTTCTTTTTAGT 59.306 40.000 0.00 0.00 0.00 2.24
423 502 5.693555 ACGTACTCCTTCCGTTTCTTTTTAG 59.306 40.000 0.00 0.00 0.00 1.85
424 503 5.463061 CACGTACTCCTTCCGTTTCTTTTTA 59.537 40.000 0.00 0.00 31.46 1.52
425 504 4.271776 CACGTACTCCTTCCGTTTCTTTTT 59.728 41.667 0.00 0.00 31.46 1.94
426 505 3.805971 CACGTACTCCTTCCGTTTCTTTT 59.194 43.478 0.00 0.00 31.46 2.27
427 506 3.387397 CACGTACTCCTTCCGTTTCTTT 58.613 45.455 0.00 0.00 31.46 2.52
428 507 2.288640 CCACGTACTCCTTCCGTTTCTT 60.289 50.000 0.00 0.00 31.46 2.52
429 508 1.271656 CCACGTACTCCTTCCGTTTCT 59.728 52.381 0.00 0.00 31.46 2.52
430 509 1.270550 TCCACGTACTCCTTCCGTTTC 59.729 52.381 0.00 0.00 31.46 2.78
431 510 1.331214 TCCACGTACTCCTTCCGTTT 58.669 50.000 0.00 0.00 31.46 3.60
432 511 1.553706 ATCCACGTACTCCTTCCGTT 58.446 50.000 0.00 0.00 31.46 4.44
433 512 2.092753 TCTATCCACGTACTCCTTCCGT 60.093 50.000 0.00 0.00 34.71 4.69
434 513 2.569059 TCTATCCACGTACTCCTTCCG 58.431 52.381 0.00 0.00 0.00 4.30
435 514 4.341520 ACAATCTATCCACGTACTCCTTCC 59.658 45.833 0.00 0.00 0.00 3.46
436 515 5.517322 ACAATCTATCCACGTACTCCTTC 57.483 43.478 0.00 0.00 0.00 3.46
437 516 5.934402 AACAATCTATCCACGTACTCCTT 57.066 39.130 0.00 0.00 0.00 3.36
438 517 5.889853 TGTAACAATCTATCCACGTACTCCT 59.110 40.000 0.00 0.00 0.00 3.69
439 518 6.140303 TGTAACAATCTATCCACGTACTCC 57.860 41.667 0.00 0.00 0.00 3.85
440 519 6.183360 ACCTGTAACAATCTATCCACGTACTC 60.183 42.308 0.00 0.00 0.00 2.59
441 520 5.655532 ACCTGTAACAATCTATCCACGTACT 59.344 40.000 0.00 0.00 0.00 2.73
442 521 5.899299 ACCTGTAACAATCTATCCACGTAC 58.101 41.667 0.00 0.00 0.00 3.67
443 522 6.153170 TGAACCTGTAACAATCTATCCACGTA 59.847 38.462 0.00 0.00 0.00 3.57
444 523 5.046878 TGAACCTGTAACAATCTATCCACGT 60.047 40.000 0.00 0.00 0.00 4.49
445 524 5.416083 TGAACCTGTAACAATCTATCCACG 58.584 41.667 0.00 0.00 0.00 4.94
454 533 5.827797 ACACATGAGTTGAACCTGTAACAAT 59.172 36.000 0.00 0.00 0.00 2.71
500 582 3.007940 TCAGTAGGTGGATCTGTTTGTGG 59.992 47.826 0.00 0.00 0.00 4.17
540 623 3.313249 CCGTCCATACACTGACACGTATA 59.687 47.826 0.00 0.00 32.21 1.47
604 695 2.346766 TGTGCATGGTGTCTGTCTTT 57.653 45.000 0.00 0.00 0.00 2.52
644 737 0.605319 GGTGAAGATGTGTTGGCGGA 60.605 55.000 0.00 0.00 0.00 5.54
645 738 0.606401 AGGTGAAGATGTGTTGGCGG 60.606 55.000 0.00 0.00 0.00 6.13
653 746 4.985538 TGGAAAGCTAAAGGTGAAGATGT 58.014 39.130 0.00 0.00 0.00 3.06
691 784 6.393990 AGTTGTCATGTGTCATTAGACTCTC 58.606 40.000 0.00 0.00 45.20 3.20
696 789 5.482163 TGGAGTTGTCATGTGTCATTAGA 57.518 39.130 0.00 0.00 0.00 2.10
775 868 8.646004 ACTATAGTTATGCAGTGTCATCTCAAT 58.354 33.333 0.00 0.00 0.00 2.57
789 882 6.651225 GGGAGGACAATCAACTATAGTTATGC 59.349 42.308 17.62 12.04 36.32 3.14
798 891 2.838202 GGTGAGGGAGGACAATCAACTA 59.162 50.000 0.00 0.00 0.00 2.24
833 926 5.813157 GGCTTGAGGTTGAAGAATACTACTC 59.187 44.000 0.00 0.00 0.00 2.59
835 928 4.567159 CGGCTTGAGGTTGAAGAATACTAC 59.433 45.833 0.00 0.00 0.00 2.73
836 929 4.464951 TCGGCTTGAGGTTGAAGAATACTA 59.535 41.667 0.00 0.00 0.00 1.82
863 956 1.528129 CCTGCTTCTTCTTTTCGGCT 58.472 50.000 0.00 0.00 0.00 5.52
869 962 2.947127 AGTCTGCCTGCTTCTTCTTT 57.053 45.000 0.00 0.00 0.00 2.52
877 970 4.767478 CATGCATATATAGTCTGCCTGCT 58.233 43.478 0.00 0.00 35.02 4.24
879 972 4.331992 GTGCATGCATATATAGTCTGCCTG 59.668 45.833 25.64 6.17 35.47 4.85
880 973 4.224594 AGTGCATGCATATATAGTCTGCCT 59.775 41.667 25.64 8.25 35.02 4.75
881 974 4.511527 AGTGCATGCATATATAGTCTGCC 58.488 43.478 25.64 5.79 35.02 4.85
882 975 6.255237 CAGTAGTGCATGCATATATAGTCTGC 59.745 42.308 25.64 16.12 36.45 4.26
934 1033 3.893763 TGGCAAAACACGCACGGG 61.894 61.111 0.00 0.00 0.00 5.28
953 1055 4.610945 CCAAGTAGACTGCAAAAGTTTGG 58.389 43.478 5.95 0.00 40.07 3.28
1005 1120 0.391661 TCCCTTCTTGCATGCTCGAC 60.392 55.000 20.33 0.00 0.00 4.20
1043 1158 1.076995 TCGGCTCGAGAGGATCCAA 60.077 57.895 18.75 0.00 33.66 3.53
1044 1159 2.595655 TCGGCTCGAGAGGATCCA 59.404 61.111 18.75 0.00 33.66 3.41
1226 1359 2.119801 AGATGACTTCCTTGCGCATT 57.880 45.000 12.75 0.00 0.00 3.56
1227 1360 2.012673 GAAGATGACTTCCTTGCGCAT 58.987 47.619 12.75 0.00 44.60 4.73
1260 1399 1.444672 CCAGCTCATCATCAGCGGA 59.555 57.895 0.00 0.00 42.14 5.54
1262 1401 0.033090 TAGCCAGCTCATCATCAGCG 59.967 55.000 0.00 0.00 42.14 5.18
1263 1402 2.251409 TTAGCCAGCTCATCATCAGC 57.749 50.000 0.00 0.00 37.12 4.26
1264 1403 3.538591 TGTTTAGCCAGCTCATCATCAG 58.461 45.455 0.00 0.00 0.00 2.90
1265 1404 3.632643 TGTTTAGCCAGCTCATCATCA 57.367 42.857 0.00 0.00 0.00 3.07
1271 1410 1.908619 TCCTGATGTTTAGCCAGCTCA 59.091 47.619 0.00 0.00 0.00 4.26
1298 1437 4.678269 CGACTGCACGACGACGGT 62.678 66.667 12.58 4.15 44.46 4.83
1309 1448 2.127609 GCTTGTTGTCGCGACTGC 60.128 61.111 36.27 27.79 37.91 4.40
1312 1451 2.551270 CAGGCTTGTTGTCGCGAC 59.449 61.111 31.66 31.66 0.00 5.19
1321 1460 2.113986 GGTCTGGTGCAGGCTTGT 59.886 61.111 0.00 0.00 36.22 3.16
1349 1488 2.104331 CGCCGTAGCCGTTGATCT 59.896 61.111 0.00 0.00 34.57 2.75
1398 1537 0.981183 AGTTCCAACGGTCCATGCTA 59.019 50.000 0.00 0.00 0.00 3.49
1399 1538 0.981183 TAGTTCCAACGGTCCATGCT 59.019 50.000 0.00 0.00 0.00 3.79
1423 1568 3.855950 CGACCTTTTAACTAGGCGTACAG 59.144 47.826 0.00 0.00 36.17 2.74
1424 1569 3.505680 TCGACCTTTTAACTAGGCGTACA 59.494 43.478 13.89 1.11 36.17 2.90
1468 1613 4.295199 AACACGGGAAAGGGGCCC 62.295 66.667 17.12 17.12 42.41 5.80
1480 1625 8.932791 AGGAGTAAAATATAGTCAAACAACACG 58.067 33.333 0.00 0.00 0.00 4.49
1492 1637 9.813826 ATTTTGGGATGGAGGAGTAAAATATAG 57.186 33.333 0.00 0.00 0.00 1.31
1497 1642 7.396055 CACTTATTTTGGGATGGAGGAGTAAAA 59.604 37.037 0.00 0.00 0.00 1.52
1501 1646 4.292306 ACACTTATTTTGGGATGGAGGAGT 59.708 41.667 0.00 0.00 0.00 3.85
1502 1647 4.860022 ACACTTATTTTGGGATGGAGGAG 58.140 43.478 0.00 0.00 0.00 3.69
1503 1648 4.540099 AGACACTTATTTTGGGATGGAGGA 59.460 41.667 0.00 0.00 0.00 3.71
1504 1649 4.860022 AGACACTTATTTTGGGATGGAGG 58.140 43.478 0.00 0.00 0.00 4.30
1505 1650 5.945784 TCAAGACACTTATTTTGGGATGGAG 59.054 40.000 0.00 0.00 0.00 3.86
1506 1651 5.886609 TCAAGACACTTATTTTGGGATGGA 58.113 37.500 0.00 0.00 0.00 3.41
1507 1652 5.393461 GCTCAAGACACTTATTTTGGGATGG 60.393 44.000 0.00 0.00 0.00 3.51
1508 1653 5.416952 AGCTCAAGACACTTATTTTGGGATG 59.583 40.000 0.00 0.00 0.00 3.51
1509 1654 5.574188 AGCTCAAGACACTTATTTTGGGAT 58.426 37.500 0.00 0.00 0.00 3.85
1510 1655 4.985538 AGCTCAAGACACTTATTTTGGGA 58.014 39.130 0.00 0.00 0.00 4.37
1511 1656 5.712152 AAGCTCAAGACACTTATTTTGGG 57.288 39.130 0.00 0.00 0.00 4.12
1512 1657 7.440523 ACTAAGCTCAAGACACTTATTTTGG 57.559 36.000 3.19 0.00 0.00 3.28
1513 1658 8.988934 TGTACTAAGCTCAAGACACTTATTTTG 58.011 33.333 3.19 0.00 0.00 2.44
1514 1659 9.555727 TTGTACTAAGCTCAAGACACTTATTTT 57.444 29.630 3.19 0.00 0.00 1.82
1515 1660 9.555727 TTTGTACTAAGCTCAAGACACTTATTT 57.444 29.630 3.19 0.00 0.00 1.40
1516 1661 9.726438 ATTTGTACTAAGCTCAAGACACTTATT 57.274 29.630 3.19 0.00 0.00 1.40
1517 1662 9.726438 AATTTGTACTAAGCTCAAGACACTTAT 57.274 29.630 3.19 0.00 0.00 1.73
1518 1663 9.555727 AAATTTGTACTAAGCTCAAGACACTTA 57.444 29.630 3.19 0.00 0.00 2.24
1519 1664 8.345565 CAAATTTGTACTAAGCTCAAGACACTT 58.654 33.333 10.15 0.00 0.00 3.16
1520 1665 7.499232 ACAAATTTGTACTAAGCTCAAGACACT 59.501 33.333 22.10 0.00 40.16 3.55
1521 1666 7.639945 ACAAATTTGTACTAAGCTCAAGACAC 58.360 34.615 22.10 2.09 40.16 3.67
1522 1667 7.801716 ACAAATTTGTACTAAGCTCAAGACA 57.198 32.000 22.10 0.00 40.16 3.41
1547 1692 9.857957 GTGTCTTAACTTTGTATTAGCTCTAGT 57.142 33.333 0.00 0.00 0.00 2.57
1557 1702 9.449719 CCCAGAATAAGTGTCTTAACTTTGTAT 57.550 33.333 0.00 0.00 40.77 2.29
1558 1703 8.653191 TCCCAGAATAAGTGTCTTAACTTTGTA 58.347 33.333 0.00 0.00 40.77 2.41
1559 1704 7.514721 TCCCAGAATAAGTGTCTTAACTTTGT 58.485 34.615 0.00 0.00 40.77 2.83
1560 1705 7.979444 TCCCAGAATAAGTGTCTTAACTTTG 57.021 36.000 0.00 0.00 40.77 2.77
1561 1706 7.611855 CCATCCCAGAATAAGTGTCTTAACTTT 59.388 37.037 0.00 0.00 40.77 2.66
1562 1707 7.037586 TCCATCCCAGAATAAGTGTCTTAACTT 60.038 37.037 0.00 0.00 42.89 2.66
1563 1708 6.443849 TCCATCCCAGAATAAGTGTCTTAACT 59.556 38.462 0.00 0.00 0.00 2.24
1564 1709 6.650120 TCCATCCCAGAATAAGTGTCTTAAC 58.350 40.000 0.00 0.00 0.00 2.01
1565 1710 6.126768 CCTCCATCCCAGAATAAGTGTCTTAA 60.127 42.308 0.00 0.00 0.00 1.85
1566 1711 5.366768 CCTCCATCCCAGAATAAGTGTCTTA 59.633 44.000 0.00 0.00 0.00 2.10
1567 1712 4.164988 CCTCCATCCCAGAATAAGTGTCTT 59.835 45.833 0.00 0.00 0.00 3.01
1568 1713 3.713764 CCTCCATCCCAGAATAAGTGTCT 59.286 47.826 0.00 0.00 0.00 3.41
1569 1714 3.181450 CCCTCCATCCCAGAATAAGTGTC 60.181 52.174 0.00 0.00 0.00 3.67
1570 1715 2.780010 CCCTCCATCCCAGAATAAGTGT 59.220 50.000 0.00 0.00 0.00 3.55
1571 1716 3.048600 TCCCTCCATCCCAGAATAAGTG 58.951 50.000 0.00 0.00 0.00 3.16
1572 1717 3.311702 ACTCCCTCCATCCCAGAATAAGT 60.312 47.826 0.00 0.00 0.00 2.24
1573 1718 3.321950 ACTCCCTCCATCCCAGAATAAG 58.678 50.000 0.00 0.00 0.00 1.73
1574 1719 3.438131 ACTCCCTCCATCCCAGAATAA 57.562 47.619 0.00 0.00 0.00 1.40
1575 1720 4.361367 AGATACTCCCTCCATCCCAGAATA 59.639 45.833 0.00 0.00 0.00 1.75
1576 1721 3.145667 AGATACTCCCTCCATCCCAGAAT 59.854 47.826 0.00 0.00 0.00 2.40
1577 1722 2.524440 AGATACTCCCTCCATCCCAGAA 59.476 50.000 0.00 0.00 0.00 3.02
1578 1723 2.156425 AGATACTCCCTCCATCCCAGA 58.844 52.381 0.00 0.00 0.00 3.86
1579 1724 2.711895 AGATACTCCCTCCATCCCAG 57.288 55.000 0.00 0.00 0.00 4.45
1580 1725 3.438131 AAAGATACTCCCTCCATCCCA 57.562 47.619 0.00 0.00 0.00 4.37
1581 1726 4.262506 CGTAAAAGATACTCCCTCCATCCC 60.263 50.000 0.00 0.00 0.00 3.85
1582 1727 4.262506 CCGTAAAAGATACTCCCTCCATCC 60.263 50.000 0.00 0.00 0.00 3.51
1583 1728 4.344390 ACCGTAAAAGATACTCCCTCCATC 59.656 45.833 0.00 0.00 0.00 3.51
1584 1729 4.296056 ACCGTAAAAGATACTCCCTCCAT 58.704 43.478 0.00 0.00 0.00 3.41
1585 1730 3.716431 ACCGTAAAAGATACTCCCTCCA 58.284 45.455 0.00 0.00 0.00 3.86
1586 1731 4.750021 AACCGTAAAAGATACTCCCTCC 57.250 45.455 0.00 0.00 0.00 4.30
1587 1732 5.936372 ACAAAACCGTAAAAGATACTCCCTC 59.064 40.000 0.00 0.00 0.00 4.30
1588 1733 5.872963 ACAAAACCGTAAAAGATACTCCCT 58.127 37.500 0.00 0.00 0.00 4.20
1589 1734 6.564709 AACAAAACCGTAAAAGATACTCCC 57.435 37.500 0.00 0.00 0.00 4.30
1590 1735 7.641760 TCAAACAAAACCGTAAAAGATACTCC 58.358 34.615 0.00 0.00 0.00 3.85
1591 1736 8.340443 ACTCAAACAAAACCGTAAAAGATACTC 58.660 33.333 0.00 0.00 0.00 2.59
1592 1737 8.217131 ACTCAAACAAAACCGTAAAAGATACT 57.783 30.769 0.00 0.00 0.00 2.12
1596 1741 9.328845 ACTATACTCAAACAAAACCGTAAAAGA 57.671 29.630 0.00 0.00 0.00 2.52
1597 1742 9.940166 AACTATACTCAAACAAAACCGTAAAAG 57.060 29.630 0.00 0.00 0.00 2.27
1603 1748 7.586300 CACTCAAACTATACTCAAACAAAACCG 59.414 37.037 0.00 0.00 0.00 4.44
1650 1795 3.244044 TGAAAATTAAAGGCCCAGCACAC 60.244 43.478 0.00 0.00 0.00 3.82
1756 1978 7.006509 GCAATAGGGATATATGTATGCCCAAT 58.993 38.462 15.10 7.74 46.80 3.16
1779 2342 2.633967 ACAATCATGCAGGAAAAAGGCA 59.366 40.909 4.62 0.00 42.43 4.75
1803 2366 7.290061 CCATTTCTTCCCCAGAGTATGATTAA 58.710 38.462 0.00 0.00 31.52 1.40
1811 2377 0.332972 GCCCATTTCTTCCCCAGAGT 59.667 55.000 0.00 0.00 31.12 3.24
1815 2381 1.341976 GCTAAGCCCATTTCTTCCCCA 60.342 52.381 0.00 0.00 0.00 4.96
1825 2391 7.826252 CAGTATATCTTGTTATGCTAAGCCCAT 59.174 37.037 0.00 0.00 0.00 4.00
1851 2417 9.569167 CTCCTTCCGGTTTTTAAATTTATCTTC 57.431 33.333 0.00 0.00 0.00 2.87
1919 2493 2.826488 ACATGAGAGGTAGGTGCTTCT 58.174 47.619 0.00 0.00 0.00 2.85
1935 2509 2.164219 AGCGCAATGGGAAAACTACATG 59.836 45.455 11.47 0.00 0.00 3.21
1960 2534 8.927675 TTAAACTCCAAAAGTATCTTGGCTTA 57.072 30.769 0.00 0.00 42.68 3.09
1989 2563 8.859090 TGAACCAAATGAGAGTTTTTATCACAT 58.141 29.630 0.00 0.00 30.55 3.21
1990 2564 8.231692 TGAACCAAATGAGAGTTTTTATCACA 57.768 30.769 0.00 0.00 0.00 3.58
1995 2569 8.463930 ACATCTGAACCAAATGAGAGTTTTTA 57.536 30.769 0.00 0.00 0.00 1.52
1996 2570 7.352079 ACATCTGAACCAAATGAGAGTTTTT 57.648 32.000 0.00 0.00 0.00 1.94
1997 2571 6.966534 ACATCTGAACCAAATGAGAGTTTT 57.033 33.333 0.00 0.00 0.00 2.43
2003 2577 5.458041 AACCAACATCTGAACCAAATGAG 57.542 39.130 0.00 0.00 0.00 2.90
2004 2578 5.867903 AAACCAACATCTGAACCAAATGA 57.132 34.783 0.00 0.00 0.00 2.57
2005 2579 8.430801 TTTAAAACCAACATCTGAACCAAATG 57.569 30.769 0.00 0.00 0.00 2.32
2019 2593 6.143278 CGTGTCTTTATGGCTTTAAAACCAAC 59.857 38.462 14.09 8.16 39.96 3.77
2028 2602 3.074412 CCAGACGTGTCTTTATGGCTTT 58.926 45.455 0.00 0.00 37.98 3.51
2164 2742 9.991906 CTCCATTATATGCTTCCAAATTTCATT 57.008 29.630 0.00 0.00 0.00 2.57
2173 2751 4.645535 GCAGTCTCCATTATATGCTTCCA 58.354 43.478 0.00 0.00 0.00 3.53
2174 2752 3.681897 CGCAGTCTCCATTATATGCTTCC 59.318 47.826 0.00 0.00 0.00 3.46
2190 2768 3.747099 ACAATGCTATCAAACGCAGTC 57.253 42.857 0.00 0.00 45.00 3.51
2208 2788 9.480053 GTACACTTACACCTATCAAAGTTTACA 57.520 33.333 0.00 0.00 36.13 2.41
2209 2789 9.702494 AGTACACTTACACCTATCAAAGTTTAC 57.298 33.333 0.00 0.00 36.25 2.01
2211 2791 9.702494 GTAGTACACTTACACCTATCAAAGTTT 57.298 33.333 0.00 0.00 29.93 2.66
2212 2792 8.309656 GGTAGTACACTTACACCTATCAAAGTT 58.690 37.037 2.06 0.00 31.63 2.66
2213 2793 7.093596 GGGTAGTACACTTACACCTATCAAAGT 60.094 40.741 2.06 0.00 33.37 2.66
2214 2794 7.123847 AGGGTAGTACACTTACACCTATCAAAG 59.876 40.741 0.00 0.00 33.37 2.77
2215 2795 6.955851 AGGGTAGTACACTTACACCTATCAAA 59.044 38.462 0.00 0.00 33.37 2.69
2216 2796 6.496743 AGGGTAGTACACTTACACCTATCAA 58.503 40.000 0.00 0.00 33.37 2.57
2217 2797 6.083487 AGGGTAGTACACTTACACCTATCA 57.917 41.667 0.00 0.00 33.37 2.15
2218 2798 5.238214 CGAGGGTAGTACACTTACACCTATC 59.762 48.000 6.50 0.00 27.47 2.08
2219 2799 5.128919 CGAGGGTAGTACACTTACACCTAT 58.871 45.833 6.50 0.00 27.47 2.57
2220 2800 4.019321 ACGAGGGTAGTACACTTACACCTA 60.019 45.833 6.50 0.00 27.47 3.08
2221 2801 3.245052 ACGAGGGTAGTACACTTACACCT 60.245 47.826 6.50 0.00 27.47 4.00
2222 2802 3.084786 ACGAGGGTAGTACACTTACACC 58.915 50.000 6.50 0.00 27.47 4.16
2223 2803 4.773323 AACGAGGGTAGTACACTTACAC 57.227 45.455 6.50 0.00 27.47 2.90
2224 2804 5.804639 TCTAACGAGGGTAGTACACTTACA 58.195 41.667 6.50 0.00 27.47 2.41
2225 2805 6.356757 CTCTAACGAGGGTAGTACACTTAC 57.643 45.833 6.50 0.00 27.47 2.34
2239 2819 1.885163 AACCGTGGCCCTCTAACGAG 61.885 60.000 13.66 6.78 39.64 4.18
2240 2820 1.474332 AAACCGTGGCCCTCTAACGA 61.474 55.000 13.66 0.00 39.64 3.85
2241 2821 0.247185 TAAACCGTGGCCCTCTAACG 59.753 55.000 0.00 2.21 37.07 3.18
2242 2822 2.704464 ATAAACCGTGGCCCTCTAAC 57.296 50.000 0.00 0.00 0.00 2.34
2243 2823 6.270463 TCAATATATAAACCGTGGCCCTCTAA 59.730 38.462 0.00 0.00 0.00 2.10
2244 2824 5.781306 TCAATATATAAACCGTGGCCCTCTA 59.219 40.000 0.00 0.00 0.00 2.43
2245 2825 4.595781 TCAATATATAAACCGTGGCCCTCT 59.404 41.667 0.00 0.00 0.00 3.69
2246 2826 4.901868 TCAATATATAAACCGTGGCCCTC 58.098 43.478 0.00 0.00 0.00 4.30
2247 2827 4.986054 TCAATATATAAACCGTGGCCCT 57.014 40.909 0.00 0.00 0.00 5.19
2248 2828 5.105917 CCAATCAATATATAAACCGTGGCCC 60.106 44.000 0.00 0.00 0.00 5.80
2249 2829 5.708230 TCCAATCAATATATAAACCGTGGCC 59.292 40.000 0.00 0.00 0.00 5.36
2250 2830 6.608610 GTCCAATCAATATATAAACCGTGGC 58.391 40.000 0.00 0.00 0.00 5.01
2251 2831 6.128391 CCGTCCAATCAATATATAAACCGTGG 60.128 42.308 0.00 0.00 0.00 4.94
2252 2832 6.128391 CCCGTCCAATCAATATATAAACCGTG 60.128 42.308 0.00 0.00 0.00 4.94
2253 2833 5.935789 CCCGTCCAATCAATATATAAACCGT 59.064 40.000 0.00 0.00 0.00 4.83
2254 2834 5.353123 CCCCGTCCAATCAATATATAAACCG 59.647 44.000 0.00 0.00 0.00 4.44
2255 2835 5.124936 GCCCCGTCCAATCAATATATAAACC 59.875 44.000 0.00 0.00 0.00 3.27
2256 2836 5.944007 AGCCCCGTCCAATCAATATATAAAC 59.056 40.000 0.00 0.00 0.00 2.01
2257 2837 6.134535 AGCCCCGTCCAATCAATATATAAA 57.865 37.500 0.00 0.00 0.00 1.40
2258 2838 5.772393 AGCCCCGTCCAATCAATATATAA 57.228 39.130 0.00 0.00 0.00 0.98
2259 2839 5.772393 AAGCCCCGTCCAATCAATATATA 57.228 39.130 0.00 0.00 0.00 0.86
2260 2840 4.657814 AAGCCCCGTCCAATCAATATAT 57.342 40.909 0.00 0.00 0.00 0.86
2261 2841 5.338871 GGATAAGCCCCGTCCAATCAATATA 60.339 44.000 0.00 0.00 32.23 0.86
2262 2842 4.567747 GGATAAGCCCCGTCCAATCAATAT 60.568 45.833 0.00 0.00 32.23 1.28
2263 2843 3.244770 GGATAAGCCCCGTCCAATCAATA 60.245 47.826 0.00 0.00 32.23 1.90
2264 2844 2.489073 GGATAAGCCCCGTCCAATCAAT 60.489 50.000 0.00 0.00 32.23 2.57
2265 2845 1.133915 GGATAAGCCCCGTCCAATCAA 60.134 52.381 0.00 0.00 32.23 2.57
2266 2846 0.472471 GGATAAGCCCCGTCCAATCA 59.528 55.000 0.00 0.00 32.23 2.57
2267 2847 3.324207 GGATAAGCCCCGTCCAATC 57.676 57.895 0.00 0.00 32.23 2.67
2277 2857 1.006454 GCGGTCTACGGGATAAGCC 60.006 63.158 0.00 0.00 44.51 4.35
2278 2858 1.006454 GGCGGTCTACGGGATAAGC 60.006 63.158 0.00 0.00 44.51 3.09
2279 2859 1.285023 CGGCGGTCTACGGGATAAG 59.715 63.158 0.00 0.00 44.51 1.73
2280 2860 2.195567 CCGGCGGTCTACGGGATAA 61.196 63.158 19.97 0.00 46.08 1.75
2281 2861 2.595463 CCGGCGGTCTACGGGATA 60.595 66.667 19.97 0.00 46.08 2.59
2287 2867 1.006102 CATCATCCCGGCGGTCTAC 60.006 63.158 26.32 0.00 0.00 2.59
2288 2868 0.757561 TTCATCATCCCGGCGGTCTA 60.758 55.000 26.32 10.42 0.00 2.59
2289 2869 2.032860 CTTCATCATCCCGGCGGTCT 62.033 60.000 26.32 8.59 0.00 3.85
2290 2870 1.595382 CTTCATCATCCCGGCGGTC 60.595 63.158 26.32 0.00 0.00 4.79
2291 2871 1.410850 ATCTTCATCATCCCGGCGGT 61.411 55.000 26.32 3.67 0.00 5.68
2292 2872 0.952497 CATCTTCATCATCCCGGCGG 60.952 60.000 21.46 21.46 0.00 6.13
2293 2873 0.952497 CCATCTTCATCATCCCGGCG 60.952 60.000 0.00 0.00 0.00 6.46
2294 2874 0.397941 TCCATCTTCATCATCCCGGC 59.602 55.000 0.00 0.00 0.00 6.13
2295 2875 1.696336 AGTCCATCTTCATCATCCCGG 59.304 52.381 0.00 0.00 0.00 5.73
2296 2876 2.289320 GGAGTCCATCTTCATCATCCCG 60.289 54.545 3.60 0.00 0.00 5.14
2297 2877 2.289320 CGGAGTCCATCTTCATCATCCC 60.289 54.545 10.49 0.00 0.00 3.85
2298 2878 2.289320 CCGGAGTCCATCTTCATCATCC 60.289 54.545 10.49 0.00 0.00 3.51
2299 2879 2.366916 ACCGGAGTCCATCTTCATCATC 59.633 50.000 9.46 0.00 0.00 2.92
2300 2880 2.366916 GACCGGAGTCCATCTTCATCAT 59.633 50.000 9.46 0.00 37.00 2.45
2301 2881 1.757118 GACCGGAGTCCATCTTCATCA 59.243 52.381 9.46 0.00 37.00 3.07
2302 2882 1.757118 TGACCGGAGTCCATCTTCATC 59.243 52.381 9.46 0.00 42.81 2.92
2303 2883 1.866015 TGACCGGAGTCCATCTTCAT 58.134 50.000 9.46 0.00 42.81 2.57
2304 2884 1.482182 CATGACCGGAGTCCATCTTCA 59.518 52.381 9.46 5.77 42.81 3.02
2305 2885 1.757118 TCATGACCGGAGTCCATCTTC 59.243 52.381 9.46 0.00 42.81 2.87
2306 2886 1.866015 TCATGACCGGAGTCCATCTT 58.134 50.000 9.46 1.61 42.81 2.40
2307 2887 2.094100 ATCATGACCGGAGTCCATCT 57.906 50.000 9.46 0.00 42.81 2.90
2308 2888 2.918712 AATCATGACCGGAGTCCATC 57.081 50.000 9.46 6.73 42.81 3.51
2309 2889 2.158755 GGAAATCATGACCGGAGTCCAT 60.159 50.000 9.46 2.79 42.81 3.41
2310 2890 1.209504 GGAAATCATGACCGGAGTCCA 59.790 52.381 9.46 0.00 42.81 4.02
2311 2891 1.475213 GGGAAATCATGACCGGAGTCC 60.475 57.143 9.46 0.00 42.81 3.85
2312 2892 1.475213 GGGGAAATCATGACCGGAGTC 60.475 57.143 9.46 0.00 43.83 3.36
2313 2893 0.546598 GGGGAAATCATGACCGGAGT 59.453 55.000 9.46 0.00 0.00 3.85
2314 2894 0.839946 AGGGGAAATCATGACCGGAG 59.160 55.000 9.46 0.00 0.00 4.63
2315 2895 0.837272 GAGGGGAAATCATGACCGGA 59.163 55.000 9.46 0.00 0.00 5.14
2316 2896 0.839946 AGAGGGGAAATCATGACCGG 59.160 55.000 0.00 0.00 0.00 5.28
2317 2897 1.202698 GGAGAGGGGAAATCATGACCG 60.203 57.143 0.00 0.00 0.00 4.79
2318 2898 1.202698 CGGAGAGGGGAAATCATGACC 60.203 57.143 0.00 0.00 0.00 4.02
2319 2899 1.202698 CCGGAGAGGGGAAATCATGAC 60.203 57.143 0.00 0.00 35.97 3.06
2320 2900 1.131638 CCGGAGAGGGGAAATCATGA 58.868 55.000 0.00 0.00 35.97 3.07
2321 2901 0.536006 GCCGGAGAGGGGAAATCATG 60.536 60.000 5.05 0.00 41.48 3.07
2322 2902 0.988145 TGCCGGAGAGGGGAAATCAT 60.988 55.000 5.05 0.00 41.48 2.45
2323 2903 1.615124 TGCCGGAGAGGGGAAATCA 60.615 57.895 5.05 0.00 41.48 2.57
2324 2904 1.147153 CTGCCGGAGAGGGGAAATC 59.853 63.158 5.05 0.00 41.48 2.17
2325 2905 2.378634 CCTGCCGGAGAGGGGAAAT 61.379 63.158 5.05 0.00 41.48 2.17
2326 2906 3.009115 CCTGCCGGAGAGGGGAAA 61.009 66.667 5.05 0.00 41.48 3.13
2339 2919 3.827634 CCTATTTCGGCACCCTGC 58.172 61.111 0.00 0.00 44.08 4.85
2347 2927 5.923733 ATACTATCTGGAGCCTATTTCGG 57.076 43.478 0.00 0.00 0.00 4.30
2348 2928 7.378966 TGAAATACTATCTGGAGCCTATTTCG 58.621 38.462 9.91 0.00 35.05 3.46
2349 2929 9.561069 TTTGAAATACTATCTGGAGCCTATTTC 57.439 33.333 8.56 8.56 33.82 2.17
2350 2930 9.566432 CTTTGAAATACTATCTGGAGCCTATTT 57.434 33.333 0.00 0.00 0.00 1.40
2351 2931 8.160106 CCTTTGAAATACTATCTGGAGCCTATT 58.840 37.037 0.00 0.00 0.00 1.73
2352 2932 7.293535 ACCTTTGAAATACTATCTGGAGCCTAT 59.706 37.037 0.00 0.00 0.00 2.57
2353 2933 6.615726 ACCTTTGAAATACTATCTGGAGCCTA 59.384 38.462 0.00 0.00 0.00 3.93
2354 2934 5.430089 ACCTTTGAAATACTATCTGGAGCCT 59.570 40.000 0.00 0.00 0.00 4.58
2355 2935 5.685728 ACCTTTGAAATACTATCTGGAGCC 58.314 41.667 0.00 0.00 0.00 4.70
2356 2936 7.272978 TGTACCTTTGAAATACTATCTGGAGC 58.727 38.462 0.00 0.00 0.00 4.70
2357 2937 8.696374 TCTGTACCTTTGAAATACTATCTGGAG 58.304 37.037 0.00 0.00 0.00 3.86
2358 2938 8.603898 TCTGTACCTTTGAAATACTATCTGGA 57.396 34.615 0.00 0.00 0.00 3.86
2359 2939 7.928706 CCTCTGTACCTTTGAAATACTATCTGG 59.071 40.741 0.00 0.00 0.00 3.86
2360 2940 7.439655 GCCTCTGTACCTTTGAAATACTATCTG 59.560 40.741 0.00 0.00 0.00 2.90
2361 2941 7.345914 AGCCTCTGTACCTTTGAAATACTATCT 59.654 37.037 0.00 0.00 0.00 1.98
2362 2942 7.501844 AGCCTCTGTACCTTTGAAATACTATC 58.498 38.462 0.00 0.00 0.00 2.08
2363 2943 7.439108 AGCCTCTGTACCTTTGAAATACTAT 57.561 36.000 0.00 0.00 0.00 2.12
2364 2944 6.869206 AGCCTCTGTACCTTTGAAATACTA 57.131 37.500 0.00 0.00 0.00 1.82
2365 2945 5.763876 AGCCTCTGTACCTTTGAAATACT 57.236 39.130 0.00 0.00 0.00 2.12
2366 2946 5.392057 GCAAGCCTCTGTACCTTTGAAATAC 60.392 44.000 0.00 0.00 0.00 1.89
2367 2947 4.700213 GCAAGCCTCTGTACCTTTGAAATA 59.300 41.667 0.00 0.00 0.00 1.40
2368 2948 3.507622 GCAAGCCTCTGTACCTTTGAAAT 59.492 43.478 0.00 0.00 0.00 2.17
2369 2949 2.884639 GCAAGCCTCTGTACCTTTGAAA 59.115 45.455 0.00 0.00 0.00 2.69
2370 2950 2.504367 GCAAGCCTCTGTACCTTTGAA 58.496 47.619 0.00 0.00 0.00 2.69
2371 2951 1.608025 CGCAAGCCTCTGTACCTTTGA 60.608 52.381 0.00 0.00 0.00 2.69
2372 2952 0.798776 CGCAAGCCTCTGTACCTTTG 59.201 55.000 0.00 0.00 0.00 2.77
2373 2953 0.321653 CCGCAAGCCTCTGTACCTTT 60.322 55.000 0.00 0.00 0.00 3.11
2374 2954 1.296715 CCGCAAGCCTCTGTACCTT 59.703 57.895 0.00 0.00 0.00 3.50
2375 2955 2.982130 CCGCAAGCCTCTGTACCT 59.018 61.111 0.00 0.00 0.00 3.08
2376 2956 2.820037 GCCGCAAGCCTCTGTACC 60.820 66.667 0.00 0.00 34.35 3.34
2377 2957 3.188786 CGCCGCAAGCCTCTGTAC 61.189 66.667 0.00 0.00 38.78 2.90
2378 2958 4.451150 CCGCCGCAAGCCTCTGTA 62.451 66.667 0.00 0.00 38.78 2.74
2388 2968 2.983030 ATCAACTTTGCCGCCGCA 60.983 55.556 0.00 0.00 45.49 5.69
2389 2969 2.504681 CATCAACTTTGCCGCCGC 60.505 61.111 0.00 0.00 0.00 6.53
2390 2970 0.729140 GAACATCAACTTTGCCGCCG 60.729 55.000 0.00 0.00 0.00 6.46
2391 2971 0.598065 AGAACATCAACTTTGCCGCC 59.402 50.000 0.00 0.00 0.00 6.13
2392 2972 2.159517 CCTAGAACATCAACTTTGCCGC 60.160 50.000 0.00 0.00 0.00 6.53
2393 2973 2.420022 CCCTAGAACATCAACTTTGCCG 59.580 50.000 0.00 0.00 0.00 5.69
2394 2974 3.421844 ACCCTAGAACATCAACTTTGCC 58.578 45.455 0.00 0.00 0.00 4.52
2395 2975 6.759497 ATAACCCTAGAACATCAACTTTGC 57.241 37.500 0.00 0.00 0.00 3.68


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.