Multiple sequence alignment - TraesCS5B01G009800

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G009800 chr5B 100.000 2489 0 0 1 2489 9525214 9522726 0.000000e+00 4597.0
1 TraesCS5B01G009800 chr5B 95.378 238 11 0 2154 2391 271807812 271808049 1.810000e-101 379.0
2 TraesCS5B01G009800 chr5B 85.662 272 21 9 1832 2089 327937117 327937384 1.130000e-68 270.0
3 TraesCS5B01G009800 chr5A 84.491 1483 131 40 161 1580 7656543 7655097 0.000000e+00 1373.0
4 TraesCS5B01G009800 chr5A 88.927 289 23 5 1814 2096 7654915 7654630 5.090000e-92 348.0
5 TraesCS5B01G009800 chr5D 92.030 803 45 9 730 1529 9527046 9526260 0.000000e+00 1110.0
6 TraesCS5B01G009800 chr5D 82.153 706 80 21 19 720 9527747 9527084 4.650000e-157 564.0
7 TraesCS5B01G009800 chr5D 88.949 371 22 8 1324 1685 9329832 9329472 8.170000e-120 440.0
8 TraesCS5B01G009800 chr5D 84.483 406 36 15 1766 2158 9526107 9525716 2.340000e-100 375.0
9 TraesCS5B01G009800 chr1B 92.537 268 18 2 2127 2394 270823914 270824179 1.400000e-102 383.0
10 TraesCS5B01G009800 chr1B 100.000 29 0 0 624 652 168150064 168150092 1.000000e-03 54.7
11 TraesCS5B01G009800 chrUn 95.378 238 11 0 2154 2391 59805088 59805325 1.810000e-101 379.0
12 TraesCS5B01G009800 chrUn 93.307 254 15 2 2138 2391 119206304 119206053 8.410000e-100 374.0
13 TraesCS5B01G009800 chr3B 95.378 238 11 0 2154 2391 766580854 766580617 1.810000e-101 379.0
14 TraesCS5B01G009800 chr3B 93.254 252 15 2 2140 2391 396835818 396836067 1.090000e-98 370.0
15 TraesCS5B01G009800 chr2B 92.308 260 15 4 2138 2394 202863820 202864077 5.060000e-97 364.0
16 TraesCS5B01G009800 chr2B 85.609 271 23 7 1832 2089 70465427 70465694 1.130000e-68 270.0
17 TraesCS5B01G009800 chr2B 85.240 271 24 7 1832 2089 71092139 71091872 5.280000e-67 265.0
18 TraesCS5B01G009800 chr2B 84.871 271 25 7 1832 2089 734423296 734423563 2.460000e-65 259.0
19 TraesCS5B01G009800 chr2B 77.500 400 77 7 17 412 637873408 637873018 6.930000e-56 228.0
20 TraesCS5B01G009800 chr6B 92.218 257 18 2 2136 2391 62502581 62502836 1.820000e-96 363.0
21 TraesCS5B01G009800 chr6B 82.005 389 58 7 23 406 706516924 706517305 1.110000e-83 320.0
22 TraesCS5B01G009800 chr6B 85.185 270 24 7 1832 2088 95105084 95105350 1.900000e-66 263.0
23 TraesCS5B01G009800 chr6B 84.133 271 27 8 1832 2089 191056260 191055993 5.320000e-62 248.0
24 TraesCS5B01G009800 chr6B 77.119 472 76 12 22 471 695926217 695926678 6.880000e-61 244.0
25 TraesCS5B01G009800 chr2D 91.923 260 19 2 2136 2394 520485416 520485674 1.820000e-96 363.0
26 TraesCS5B01G009800 chr7B 80.905 398 63 8 22 412 736089009 736088618 4.020000e-78 302.0
27 TraesCS5B01G009800 chr7B 85.240 271 24 7 1832 2089 66910672 66910939 5.280000e-67 265.0
28 TraesCS5B01G009800 chr1D 77.248 545 86 23 17 537 204999260 204999790 4.050000e-73 285.0
29 TraesCS5B01G009800 chr6D 78.517 391 73 7 17 406 469580312 469580692 1.910000e-61 246.0
30 TraesCS5B01G009800 chr4A 78.804 368 66 8 19 381 21843179 21843539 1.150000e-58 237.0
31 TraesCS5B01G009800 chr3D 78.000 400 71 13 19 412 561490707 561490319 4.140000e-58 235.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G009800 chr5B 9522726 9525214 2488 True 4597.0 4597 100.000 1 2489 1 chr5B.!!$R1 2488
1 TraesCS5B01G009800 chr5A 7654630 7656543 1913 True 860.5 1373 86.709 161 2096 2 chr5A.!!$R1 1935
2 TraesCS5B01G009800 chr5D 9525716 9527747 2031 True 683.0 1110 86.222 19 2158 3 chr5D.!!$R2 2139
3 TraesCS5B01G009800 chr1D 204999260 204999790 530 False 285.0 285 77.248 17 537 1 chr1D.!!$F1 520

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
728 799 0.250513 GTCCCTCCACTGCCACTAAG 59.749 60.0 0.0 0.0 0.0 2.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2448 2617 0.037447 TCACGGCATGGAAATGGTCA 59.963 50.0 0.0 0.0 0.0 4.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 4.405680 CCCTACATGACCATGACTAAGACA 59.594 45.833 16.07 0.00 41.20 3.41
39 40 6.667848 TGACCATGACTAAGACATTAGAGGAA 59.332 38.462 0.00 0.00 40.86 3.36
53 54 6.443849 ACATTAGAGGAAGAAACCATACCTGA 59.556 38.462 0.00 0.00 0.00 3.86
54 55 7.127955 ACATTAGAGGAAGAAACCATACCTGAT 59.872 37.037 0.00 0.00 0.00 2.90
67 68 5.134339 ACCATACCTGATATCCACAAACCAT 59.866 40.000 0.00 0.00 0.00 3.55
80 81 1.460273 AAACCATGAACCCGGCACAC 61.460 55.000 0.00 0.00 0.00 3.82
94 95 1.453155 GCACACGATCCACCATCTTT 58.547 50.000 0.00 0.00 0.00 2.52
129 130 2.498167 GCATACCGCAATCAGAATCCT 58.502 47.619 0.00 0.00 41.79 3.24
144 145 4.714308 CAGAATCCTCTCTTGGACTACCTT 59.286 45.833 0.00 0.00 39.17 3.50
146 147 4.618378 ATCCTCTCTTGGACTACCTTCT 57.382 45.455 0.00 0.00 39.17 2.85
154 155 3.759815 TGGACTACCTTCTAAGCTCCT 57.240 47.619 0.00 0.00 37.04 3.69
155 156 3.366396 TGGACTACCTTCTAAGCTCCTG 58.634 50.000 0.00 0.00 37.04 3.86
159 160 0.547712 ACCTTCTAAGCTCCTGGCCA 60.548 55.000 4.71 4.71 43.05 5.36
232 236 4.119363 AGGATGCCGCTGCCACAT 62.119 61.111 0.00 2.05 36.33 3.21
279 283 0.254107 AGACCCACCCCCAACCATAT 60.254 55.000 0.00 0.00 0.00 1.78
280 284 1.011545 AGACCCACCCCCAACCATATA 59.988 52.381 0.00 0.00 0.00 0.86
281 285 2.070573 GACCCACCCCCAACCATATAT 58.929 52.381 0.00 0.00 0.00 0.86
282 286 3.115723 AGACCCACCCCCAACCATATATA 60.116 47.826 0.00 0.00 0.00 0.86
291 295 4.966805 CCCCAACCATATATAGGACCGTAT 59.033 45.833 0.00 0.00 0.00 3.06
293 297 5.163343 CCCAACCATATATAGGACCGTATGG 60.163 48.000 18.65 18.65 45.75 2.74
377 382 7.224557 GCCAAGACAATGAACAATGTAAAAACT 59.775 33.333 0.00 0.00 0.00 2.66
406 411 1.887707 GGGCCTAAAGCGATCCACG 60.888 63.158 0.84 0.00 45.17 4.94
432 494 1.228033 TCACCACTGACGACCGAGA 60.228 57.895 0.00 0.00 0.00 4.04
521 585 3.193691 AGATCGCCTTTCTTTCTTCGAGA 59.806 43.478 0.00 0.00 0.00 4.04
564 631 5.582665 CACCTTCTTAGCAAGAGATTACCAC 59.417 44.000 0.00 0.00 39.03 4.16
570 637 8.718102 TCTTAGCAAGAGATTACCACAATAAC 57.282 34.615 0.00 0.00 32.71 1.89
576 643 9.423061 GCAAGAGATTACCACAATAACAAATTT 57.577 29.630 0.00 0.00 0.00 1.82
611 682 1.265568 ACACGCGCGTACAAGAATAG 58.734 50.000 37.24 21.79 0.00 1.73
632 703 7.998753 ATAGAATACGGTTGCAAAGTACTAC 57.001 36.000 15.51 10.89 0.00 2.73
633 704 6.034161 AGAATACGGTTGCAAAGTACTACT 57.966 37.500 15.51 12.39 0.00 2.57
634 705 7.161773 AGAATACGGTTGCAAAGTACTACTA 57.838 36.000 15.51 0.00 0.00 1.82
635 706 7.256286 AGAATACGGTTGCAAAGTACTACTAG 58.744 38.462 15.51 0.00 0.00 2.57
636 707 4.861102 ACGGTTGCAAAGTACTACTAGT 57.139 40.909 0.00 0.00 0.00 2.57
637 708 5.964958 ACGGTTGCAAAGTACTACTAGTA 57.035 39.130 0.00 1.89 0.00 1.82
703 774 5.274015 TGCATATATACAACCCGATCCCTA 58.726 41.667 0.00 0.00 0.00 3.53
704 775 5.362717 TGCATATATACAACCCGATCCCTAG 59.637 44.000 0.00 0.00 0.00 3.02
720 791 1.379977 TAGAGCCGTCCCTCCACTG 60.380 63.158 0.00 0.00 32.17 3.66
728 799 0.250513 GTCCCTCCACTGCCACTAAG 59.749 60.000 0.00 0.00 0.00 2.18
813 915 1.413662 CCATAAGCCCTCTCCTCTCCA 60.414 57.143 0.00 0.00 0.00 3.86
918 1030 1.281656 GCAAGAAACCGTTGGTCCG 59.718 57.895 0.00 0.00 33.12 4.79
963 1075 5.047943 CGGTGGTGATTAGTTAGCTAGCTAT 60.048 44.000 24.69 13.67 0.00 2.97
993 1105 1.878953 CTCTTTGCCCTTGTGTACGT 58.121 50.000 0.00 0.00 0.00 3.57
994 1106 2.868839 GCTCTTTGCCCTTGTGTACGTA 60.869 50.000 0.00 0.00 35.15 3.57
995 1107 2.735134 CTCTTTGCCCTTGTGTACGTAC 59.265 50.000 18.90 18.90 0.00 3.67
996 1108 2.102757 TCTTTGCCCTTGTGTACGTACA 59.897 45.455 24.10 24.10 0.00 2.90
1017 1129 0.846427 ACATGGGGCAGGAAGAGGAA 60.846 55.000 0.00 0.00 0.00 3.36
1036 1148 4.760047 CCCTGACCGTGGCCTTCG 62.760 72.222 3.32 9.21 0.00 3.79
1037 1149 3.691342 CCTGACCGTGGCCTTCGA 61.691 66.667 19.23 2.49 0.00 3.71
1046 1158 4.821589 GGCCTTCGAGTGGGAGCG 62.822 72.222 0.00 0.00 0.00 5.03
1047 1159 4.070552 GCCTTCGAGTGGGAGCGT 62.071 66.667 8.33 0.00 0.00 5.07
1049 1161 2.651361 CTTCGAGTGGGAGCGTGT 59.349 61.111 0.00 0.00 0.00 4.49
1135 1247 3.628280 AAGAAGCCGGTCTCGACGC 62.628 63.158 1.90 0.00 39.00 5.19
1142 1254 2.437343 CGGTCTCGACGCTTGAAGC 61.437 63.158 7.20 7.20 39.00 3.86
1145 1257 1.729484 TCTCGACGCTTGAAGCACG 60.729 57.895 18.22 20.08 42.58 5.34
1146 1258 2.016704 CTCGACGCTTGAAGCACGT 61.017 57.895 24.39 13.77 42.58 4.49
1147 1259 2.168621 CGACGCTTGAAGCACGTG 59.831 61.111 18.22 12.28 42.58 4.49
1313 1425 4.077188 GTGCACCAAGAGCGTCGC 62.077 66.667 9.80 9.80 33.85 5.19
1418 1536 2.047274 GCTGTCCTGCAAGCGGTA 60.047 61.111 0.00 0.00 0.00 4.02
1491 1609 3.956744 GGATCCCAGGGATGCTTAATAC 58.043 50.000 28.89 11.27 45.25 1.89
1492 1610 3.330701 GGATCCCAGGGATGCTTAATACA 59.669 47.826 28.89 0.00 45.25 2.29
1493 1611 4.566488 GGATCCCAGGGATGCTTAATACAG 60.566 50.000 28.89 0.00 45.25 2.74
1494 1612 3.393687 TCCCAGGGATGCTTAATACAGT 58.606 45.455 3.01 0.00 0.00 3.55
1495 1613 4.562767 TCCCAGGGATGCTTAATACAGTA 58.437 43.478 3.01 0.00 0.00 2.74
1496 1614 4.347000 TCCCAGGGATGCTTAATACAGTAC 59.653 45.833 3.01 0.00 0.00 2.73
1516 1637 9.091220 ACAGTACTAGTAATTATCTCCCAATCC 57.909 37.037 3.61 0.00 0.00 3.01
1523 1644 8.460317 AGTAATTATCTCCCAATCCATCATCT 57.540 34.615 0.00 0.00 0.00 2.90
1526 1647 6.768641 TTATCTCCCAATCCATCATCTTCA 57.231 37.500 0.00 0.00 0.00 3.02
1529 1650 4.912133 TCTCCCAATCCATCATCTTCATCT 59.088 41.667 0.00 0.00 0.00 2.90
1531 1652 5.382616 TCCCAATCCATCATCTTCATCTTG 58.617 41.667 0.00 0.00 0.00 3.02
1532 1653 5.103813 TCCCAATCCATCATCTTCATCTTGT 60.104 40.000 0.00 0.00 0.00 3.16
1533 1654 5.597182 CCCAATCCATCATCTTCATCTTGTT 59.403 40.000 0.00 0.00 0.00 2.83
1534 1655 6.461092 CCCAATCCATCATCTTCATCTTGTTG 60.461 42.308 0.00 0.00 0.00 3.33
1535 1656 6.461092 CCAATCCATCATCTTCATCTTGTTGG 60.461 42.308 0.00 0.00 33.45 3.77
1536 1657 5.440207 TCCATCATCTTCATCTTGTTGGA 57.560 39.130 0.00 0.00 37.07 3.53
1537 1658 6.009908 TCCATCATCTTCATCTTGTTGGAT 57.990 37.500 0.00 0.00 35.40 3.41
1540 1661 6.546403 CCATCATCTTCATCTTGTTGGATTCT 59.454 38.462 0.00 0.00 33.82 2.40
1545 1666 7.678947 TCTTCATCTTGTTGGATTCTTCTTC 57.321 36.000 0.00 0.00 0.00 2.87
1551 1672 7.264373 TCTTGTTGGATTCTTCTTCTTTGTC 57.736 36.000 0.00 0.00 0.00 3.18
1552 1673 6.828273 TCTTGTTGGATTCTTCTTCTTTGTCA 59.172 34.615 0.00 0.00 0.00 3.58
1553 1674 7.503566 TCTTGTTGGATTCTTCTTCTTTGTCAT 59.496 33.333 0.00 0.00 0.00 3.06
1578 1703 6.076981 CATGGTTTGCACTAGTTTCTTTCT 57.923 37.500 0.00 0.00 0.00 2.52
1579 1704 5.499139 TGGTTTGCACTAGTTTCTTTCTG 57.501 39.130 0.00 0.00 0.00 3.02
1580 1705 4.338118 TGGTTTGCACTAGTTTCTTTCTGG 59.662 41.667 0.00 0.00 0.00 3.86
1581 1706 4.338400 GGTTTGCACTAGTTTCTTTCTGGT 59.662 41.667 0.00 0.00 0.00 4.00
1582 1707 5.505819 GGTTTGCACTAGTTTCTTTCTGGTC 60.506 44.000 0.00 0.00 0.00 4.02
1583 1708 4.415881 TGCACTAGTTTCTTTCTGGTCA 57.584 40.909 0.00 0.00 0.00 4.02
1584 1709 4.776349 TGCACTAGTTTCTTTCTGGTCAA 58.224 39.130 0.00 0.00 0.00 3.18
1585 1710 4.816385 TGCACTAGTTTCTTTCTGGTCAAG 59.184 41.667 0.00 0.00 0.00 3.02
1586 1711 4.214332 GCACTAGTTTCTTTCTGGTCAAGG 59.786 45.833 0.00 0.00 0.00 3.61
1587 1712 5.368989 CACTAGTTTCTTTCTGGTCAAGGT 58.631 41.667 0.00 0.00 0.00 3.50
1588 1713 5.823045 CACTAGTTTCTTTCTGGTCAAGGTT 59.177 40.000 0.00 0.00 0.00 3.50
1589 1714 6.990349 CACTAGTTTCTTTCTGGTCAAGGTTA 59.010 38.462 0.00 0.00 0.00 2.85
1590 1715 7.497909 CACTAGTTTCTTTCTGGTCAAGGTTAA 59.502 37.037 0.00 0.00 0.00 2.01
1591 1716 8.218488 ACTAGTTTCTTTCTGGTCAAGGTTAAT 58.782 33.333 0.00 0.00 0.00 1.40
1592 1717 7.898014 AGTTTCTTTCTGGTCAAGGTTAATT 57.102 32.000 0.00 0.00 0.00 1.40
1593 1718 8.990163 AGTTTCTTTCTGGTCAAGGTTAATTA 57.010 30.769 0.00 0.00 0.00 1.40
1594 1719 9.067986 AGTTTCTTTCTGGTCAAGGTTAATTAG 57.932 33.333 0.00 0.00 0.00 1.73
1595 1720 8.847196 GTTTCTTTCTGGTCAAGGTTAATTAGT 58.153 33.333 0.00 0.00 0.00 2.24
1597 1722 9.720769 TTCTTTCTGGTCAAGGTTAATTAGTAG 57.279 33.333 0.00 0.00 0.00 2.57
1598 1723 8.877195 TCTTTCTGGTCAAGGTTAATTAGTAGT 58.123 33.333 0.00 0.00 0.00 2.73
1601 1726 7.779073 TCTGGTCAAGGTTAATTAGTAGTAGC 58.221 38.462 0.00 0.00 0.00 3.58
1602 1727 6.567050 TGGTCAAGGTTAATTAGTAGTAGCG 58.433 40.000 0.00 0.00 0.00 4.26
1603 1728 5.981915 GGTCAAGGTTAATTAGTAGTAGCGG 59.018 44.000 0.00 0.00 0.00 5.52
1604 1729 6.406288 GGTCAAGGTTAATTAGTAGTAGCGGT 60.406 42.308 0.00 0.00 0.00 5.68
1605 1730 6.474751 GTCAAGGTTAATTAGTAGTAGCGGTG 59.525 42.308 0.00 0.00 0.00 4.94
1626 1752 6.403200 CGGTGTGATAAACTTTGGTGATTAGG 60.403 42.308 0.00 0.00 0.00 2.69
1627 1753 6.657541 GGTGTGATAAACTTTGGTGATTAGGA 59.342 38.462 0.00 0.00 0.00 2.94
1628 1754 7.148239 GGTGTGATAAACTTTGGTGATTAGGAG 60.148 40.741 0.00 0.00 0.00 3.69
1629 1755 7.606456 GTGTGATAAACTTTGGTGATTAGGAGA 59.394 37.037 0.00 0.00 0.00 3.71
1630 1756 8.160765 TGTGATAAACTTTGGTGATTAGGAGAA 58.839 33.333 0.00 0.00 0.00 2.87
1644 1770 9.660180 GTGATTAGGAGAAGTAGAAAGTTTGAT 57.340 33.333 0.00 0.00 0.00 2.57
1647 1773 8.758633 TTAGGAGAAGTAGAAAGTTTGATTCG 57.241 34.615 0.00 0.00 32.04 3.34
1648 1774 6.760291 AGGAGAAGTAGAAAGTTTGATTCGT 58.240 36.000 0.00 0.00 32.04 3.85
1649 1775 6.869388 AGGAGAAGTAGAAAGTTTGATTCGTC 59.131 38.462 0.00 0.00 32.04 4.20
1650 1776 6.645415 GGAGAAGTAGAAAGTTTGATTCGTCA 59.355 38.462 0.00 0.00 32.04 4.35
1651 1777 7.148722 GGAGAAGTAGAAAGTTTGATTCGTCAG 60.149 40.741 0.00 0.00 32.04 3.51
1652 1778 6.647067 AGAAGTAGAAAGTTTGATTCGTCAGG 59.353 38.462 0.00 0.00 32.04 3.86
1653 1779 5.238583 AGTAGAAAGTTTGATTCGTCAGGG 58.761 41.667 0.00 0.00 32.04 4.45
1654 1780 4.351874 AGAAAGTTTGATTCGTCAGGGA 57.648 40.909 0.00 0.00 32.04 4.20
1655 1781 4.714632 AGAAAGTTTGATTCGTCAGGGAA 58.285 39.130 0.00 0.00 32.04 3.97
1656 1782 5.130350 AGAAAGTTTGATTCGTCAGGGAAA 58.870 37.500 0.00 0.00 32.04 3.13
1657 1783 5.592688 AGAAAGTTTGATTCGTCAGGGAAAA 59.407 36.000 0.00 0.00 32.04 2.29
1658 1784 5.438761 AAGTTTGATTCGTCAGGGAAAAG 57.561 39.130 0.00 0.00 0.00 2.27
1659 1785 4.714632 AGTTTGATTCGTCAGGGAAAAGA 58.285 39.130 0.00 0.00 0.00 2.52
1660 1786 5.130350 AGTTTGATTCGTCAGGGAAAAGAA 58.870 37.500 0.00 0.00 0.00 2.52
1661 1787 5.239525 AGTTTGATTCGTCAGGGAAAAGAAG 59.760 40.000 0.00 0.00 0.00 2.85
1669 1795 4.200092 GTCAGGGAAAAGAAGACACACTT 58.800 43.478 0.00 0.00 42.03 3.16
1676 1802 6.420903 GGGAAAAGAAGACACACTTAATTTGC 59.579 38.462 0.00 0.00 39.13 3.68
1685 1811 4.935352 ACACTTAATTTGCATGTGTGGT 57.065 36.364 0.00 0.00 39.90 4.16
1686 1812 4.619973 ACACTTAATTTGCATGTGTGGTG 58.380 39.130 0.00 0.00 39.90 4.17
1687 1813 4.340666 ACACTTAATTTGCATGTGTGGTGA 59.659 37.500 12.07 0.00 39.90 4.02
1688 1814 5.163468 ACACTTAATTTGCATGTGTGGTGAA 60.163 36.000 12.07 0.00 39.90 3.18
1689 1815 5.403166 CACTTAATTTGCATGTGTGGTGAAG 59.597 40.000 0.00 0.00 0.00 3.02
1690 1816 5.301551 ACTTAATTTGCATGTGTGGTGAAGA 59.698 36.000 0.00 0.00 0.00 2.87
1703 1829 2.634940 TGGTGAAGACTGAAGAGGAAGG 59.365 50.000 0.00 0.00 0.00 3.46
1714 1840 3.457012 TGAAGAGGAAGGATGCATCATCA 59.543 43.478 27.25 10.46 42.13 3.07
1715 1841 4.104261 TGAAGAGGAAGGATGCATCATCAT 59.896 41.667 27.25 21.06 42.13 2.45
1716 1842 4.289238 AGAGGAAGGATGCATCATCATC 57.711 45.455 26.17 26.17 42.13 2.92
1717 1843 3.911260 AGAGGAAGGATGCATCATCATCT 59.089 43.478 28.59 28.59 42.13 2.90
1731 1876 8.154856 TGCATCATCATCTCAATCTTCATCTTA 58.845 33.333 0.00 0.00 0.00 2.10
1732 1877 9.000486 GCATCATCATCTCAATCTTCATCTTAA 58.000 33.333 0.00 0.00 0.00 1.85
1747 1892 8.896744 TCTTCATCTTAATTTCTATTGCTGTGG 58.103 33.333 0.00 0.00 0.00 4.17
1748 1893 7.572523 TCATCTTAATTTCTATTGCTGTGGG 57.427 36.000 0.00 0.00 0.00 4.61
1749 1894 7.118723 TCATCTTAATTTCTATTGCTGTGGGT 58.881 34.615 0.00 0.00 0.00 4.51
1750 1895 7.615365 TCATCTTAATTTCTATTGCTGTGGGTT 59.385 33.333 0.00 0.00 0.00 4.11
1751 1896 7.391148 TCTTAATTTCTATTGCTGTGGGTTC 57.609 36.000 0.00 0.00 0.00 3.62
1752 1897 6.945435 TCTTAATTTCTATTGCTGTGGGTTCA 59.055 34.615 0.00 0.00 0.00 3.18
1753 1898 5.649782 AATTTCTATTGCTGTGGGTTCAG 57.350 39.130 0.00 0.00 38.35 3.02
1756 1901 4.574674 TCTATTGCTGTGGGTTCAGATT 57.425 40.909 0.00 0.00 37.61 2.40
1757 1902 4.922206 TCTATTGCTGTGGGTTCAGATTT 58.078 39.130 0.00 0.00 37.61 2.17
1758 1903 4.943705 TCTATTGCTGTGGGTTCAGATTTC 59.056 41.667 0.00 0.00 37.61 2.17
1759 1904 2.655090 TGCTGTGGGTTCAGATTTCA 57.345 45.000 0.00 0.00 37.61 2.69
1760 1905 2.507484 TGCTGTGGGTTCAGATTTCAG 58.493 47.619 0.00 0.00 37.61 3.02
1761 1906 2.106338 TGCTGTGGGTTCAGATTTCAGA 59.894 45.455 0.00 0.00 37.61 3.27
1762 1907 3.149196 GCTGTGGGTTCAGATTTCAGAA 58.851 45.455 0.00 0.00 37.61 3.02
1763 1908 3.057946 GCTGTGGGTTCAGATTTCAGAAC 60.058 47.826 7.17 7.17 40.33 3.01
1764 1909 4.136796 CTGTGGGTTCAGATTTCAGAACA 58.863 43.478 15.05 0.00 42.06 3.18
1765 1910 4.728772 TGTGGGTTCAGATTTCAGAACAT 58.271 39.130 15.05 0.00 42.06 2.71
1766 1911 4.761739 TGTGGGTTCAGATTTCAGAACATC 59.238 41.667 15.05 8.80 42.06 3.06
1767 1912 4.761739 GTGGGTTCAGATTTCAGAACATCA 59.238 41.667 15.05 10.65 42.06 3.07
1768 1913 5.005740 TGGGTTCAGATTTCAGAACATCAG 58.994 41.667 15.05 1.96 42.06 2.90
1769 1914 5.221904 TGGGTTCAGATTTCAGAACATCAGA 60.222 40.000 15.05 3.67 42.06 3.27
1770 1915 5.884792 GGGTTCAGATTTCAGAACATCAGAT 59.115 40.000 15.05 0.00 42.06 2.90
1773 1918 9.118300 GGTTCAGATTTCAGAACATCAGATTAT 57.882 33.333 15.05 0.00 42.06 1.28
1778 1923 8.900781 AGATTTCAGAACATCAGATTATTGTGG 58.099 33.333 7.60 0.00 0.00 4.17
1782 1927 5.008415 CAGAACATCAGATTATTGTGGGAGC 59.992 44.000 0.00 0.00 0.00 4.70
1794 1939 1.103398 GTGGGAGCCGCATAAGCATT 61.103 55.000 0.00 0.00 42.27 3.56
1800 1945 2.854185 GAGCCGCATAAGCATTTTGTTC 59.146 45.455 0.00 0.00 42.27 3.18
1809 1954 6.529477 GCATAAGCATTTTGTTCCTTCTTCTC 59.471 38.462 0.00 0.00 41.58 2.87
1810 1955 7.576477 GCATAAGCATTTTGTTCCTTCTTCTCT 60.576 37.037 0.00 0.00 41.58 3.10
1811 1956 5.702349 AGCATTTTGTTCCTTCTTCTCTG 57.298 39.130 0.00 0.00 0.00 3.35
1828 1986 4.755437 TCTCTGTGATGGATGGATGGATA 58.245 43.478 0.00 0.00 0.00 2.59
1868 2026 1.123861 ACTCTCTGCCCTGCACTTGA 61.124 55.000 0.00 0.00 33.79 3.02
1877 2035 3.243839 TGCCCTGCACTTGAAATTTTCTC 60.244 43.478 10.33 0.00 31.71 2.87
1892 2050 2.910688 TTCTCCCTGTCAGTGTCAAC 57.089 50.000 0.00 0.00 0.00 3.18
1893 2051 2.088104 TCTCCCTGTCAGTGTCAACT 57.912 50.000 0.00 0.00 36.98 3.16
1894 2052 1.964223 TCTCCCTGTCAGTGTCAACTC 59.036 52.381 0.00 0.00 32.98 3.01
1908 2070 0.792640 CAACTCGACACTGACATGCC 59.207 55.000 0.00 0.00 0.00 4.40
1968 2133 2.708216 TGTGTCTGTGTCCATTGTGT 57.292 45.000 0.00 0.00 0.00 3.72
1982 2147 8.367911 GTGTCCATTGTGTAGATAGGAATATGA 58.632 37.037 0.00 0.00 0.00 2.15
1983 2148 8.588472 TGTCCATTGTGTAGATAGGAATATGAG 58.412 37.037 0.00 0.00 0.00 2.90
1984 2149 8.037758 GTCCATTGTGTAGATAGGAATATGAGG 58.962 40.741 0.00 0.00 0.00 3.86
1986 2151 6.360370 TTGTGTAGATAGGAATATGAGGCC 57.640 41.667 0.00 0.00 0.00 5.19
1990 2155 4.426357 AGATAGGAATATGAGGCCCTGA 57.574 45.455 0.00 0.00 0.00 3.86
1991 2156 4.970396 AGATAGGAATATGAGGCCCTGAT 58.030 43.478 0.00 0.00 0.00 2.90
1992 2157 5.357440 AGATAGGAATATGAGGCCCTGATT 58.643 41.667 0.00 0.00 0.00 2.57
1993 2158 6.515779 AGATAGGAATATGAGGCCCTGATTA 58.484 40.000 0.00 0.00 0.00 1.75
2006 2171 3.891366 GCCCTGATTATTGGTAGCAACAT 59.109 43.478 9.99 5.20 0.00 2.71
2010 2175 7.651808 CCCTGATTATTGGTAGCAACATAAAG 58.348 38.462 9.99 5.63 0.00 1.85
2014 2179 7.831690 TGATTATTGGTAGCAACATAAAGGTCA 59.168 33.333 9.99 4.51 0.00 4.02
2015 2180 7.624360 TTATTGGTAGCAACATAAAGGTCAG 57.376 36.000 9.99 0.00 0.00 3.51
2099 2268 5.521906 TGCAGATAGTACCTGAATCTCAC 57.478 43.478 0.00 0.00 33.65 3.51
2114 2283 0.734309 CTCACAAGTGCAGTGCAACA 59.266 50.000 21.67 0.00 41.47 3.33
2133 2302 2.766828 ACAGAGGCTGGTCCATAGTAAC 59.233 50.000 0.00 0.00 35.51 2.50
2140 2309 5.834204 AGGCTGGTCCATAGTAACTTAGTAG 59.166 44.000 0.00 0.00 37.29 2.57
2143 2312 7.255416 GGCTGGTCCATAGTAACTTAGTAGTAC 60.255 44.444 0.00 0.00 31.96 2.73
2144 2313 7.501892 GCTGGTCCATAGTAACTTAGTAGTACT 59.498 40.741 8.14 8.14 33.17 2.73
2151 2320 9.775854 CATAGTAACTTAGTAGTACTAGCTGGA 57.224 37.037 3.17 0.00 31.47 3.86
2154 2323 8.955388 AGTAACTTAGTAGTACTAGCTGGAAAC 58.045 37.037 3.17 1.43 31.47 2.78
2155 2324 8.955388 GTAACTTAGTAGTACTAGCTGGAAACT 58.045 37.037 3.17 9.41 31.47 2.66
2157 2326 8.504812 ACTTAGTAGTACTAGCTGGAAACTAC 57.495 38.462 25.39 25.39 41.71 2.73
2159 2328 6.077202 AGTAGTACTAGCTGGAAACTACCT 57.923 41.667 27.22 18.57 42.14 3.08
2160 2329 6.121590 AGTAGTACTAGCTGGAAACTACCTC 58.878 44.000 27.22 14.28 42.14 3.85
2161 2330 4.279982 AGTACTAGCTGGAAACTACCTCC 58.720 47.826 3.17 0.00 0.00 4.30
2162 2331 2.100989 ACTAGCTGGAAACTACCTCCG 58.899 52.381 3.17 0.00 35.55 4.63
2163 2332 2.100989 CTAGCTGGAAACTACCTCCGT 58.899 52.381 0.00 0.00 35.55 4.69
2164 2333 0.896226 AGCTGGAAACTACCTCCGTC 59.104 55.000 0.00 0.00 35.55 4.79
2165 2334 0.108281 GCTGGAAACTACCTCCGTCC 60.108 60.000 0.00 0.00 35.55 4.79
2166 2335 0.172803 CTGGAAACTACCTCCGTCCG 59.827 60.000 0.00 0.00 35.55 4.79
2167 2336 1.252904 TGGAAACTACCTCCGTCCGG 61.253 60.000 0.00 0.00 35.55 5.14
2168 2337 0.967380 GGAAACTACCTCCGTCCGGA 60.967 60.000 0.00 0.00 42.90 5.14
2169 2338 1.109609 GAAACTACCTCCGTCCGGAT 58.890 55.000 7.81 0.00 44.24 4.18
2170 2339 1.479730 GAAACTACCTCCGTCCGGATT 59.520 52.381 7.81 0.00 44.24 3.01
2171 2340 1.565067 AACTACCTCCGTCCGGATTT 58.435 50.000 7.81 1.85 44.24 2.17
2172 2341 2.442236 ACTACCTCCGTCCGGATTTA 57.558 50.000 7.81 2.95 44.24 1.40
2173 2342 2.954792 ACTACCTCCGTCCGGATTTAT 58.045 47.619 7.81 0.00 44.24 1.40
2174 2343 3.303049 ACTACCTCCGTCCGGATTTATT 58.697 45.455 7.81 0.00 44.24 1.40
2175 2344 2.614829 ACCTCCGTCCGGATTTATTG 57.385 50.000 7.81 0.00 44.24 1.90
2176 2345 1.140252 ACCTCCGTCCGGATTTATTGG 59.860 52.381 7.81 8.49 44.24 3.16
2177 2346 1.140252 CCTCCGTCCGGATTTATTGGT 59.860 52.381 7.81 0.00 44.24 3.67
2178 2347 2.420967 CCTCCGTCCGGATTTATTGGTT 60.421 50.000 7.81 0.00 44.24 3.67
2179 2348 2.870411 CTCCGTCCGGATTTATTGGTTC 59.130 50.000 7.81 0.00 44.24 3.62
2180 2349 1.944709 CCGTCCGGATTTATTGGTTCC 59.055 52.381 7.81 0.00 37.50 3.62
2181 2350 1.944709 CGTCCGGATTTATTGGTTCCC 59.055 52.381 7.81 0.00 0.00 3.97
2182 2351 2.681390 CGTCCGGATTTATTGGTTCCCA 60.681 50.000 7.81 0.00 0.00 4.37
2183 2352 3.562182 GTCCGGATTTATTGGTTCCCAT 58.438 45.455 7.81 0.00 31.53 4.00
2184 2353 3.958147 GTCCGGATTTATTGGTTCCCATT 59.042 43.478 7.81 0.00 31.53 3.16
2185 2354 3.957497 TCCGGATTTATTGGTTCCCATTG 59.043 43.478 0.00 0.00 31.53 2.82
2186 2355 3.704061 CCGGATTTATTGGTTCCCATTGT 59.296 43.478 0.00 0.00 31.53 2.71
2187 2356 4.890581 CCGGATTTATTGGTTCCCATTGTA 59.109 41.667 0.00 0.00 31.53 2.41
2188 2357 5.538433 CCGGATTTATTGGTTCCCATTGTAT 59.462 40.000 0.00 0.00 31.53 2.29
2189 2358 6.041523 CCGGATTTATTGGTTCCCATTGTATT 59.958 38.462 0.00 0.00 31.53 1.89
2190 2359 7.418483 CCGGATTTATTGGTTCCCATTGTATTT 60.418 37.037 0.00 0.00 31.53 1.40
2191 2360 7.651704 CGGATTTATTGGTTCCCATTGTATTTC 59.348 37.037 0.00 0.00 31.53 2.17
2192 2361 7.651704 GGATTTATTGGTTCCCATTGTATTTCG 59.348 37.037 0.00 0.00 31.53 3.46
2193 2362 7.469537 TTTATTGGTTCCCATTGTATTTCGT 57.530 32.000 0.00 0.00 31.53 3.85
2194 2363 8.577048 TTTATTGGTTCCCATTGTATTTCGTA 57.423 30.769 0.00 0.00 31.53 3.43
2195 2364 8.754991 TTATTGGTTCCCATTGTATTTCGTAT 57.245 30.769 0.00 0.00 31.53 3.06
2196 2365 6.687081 TTGGTTCCCATTGTATTTCGTATC 57.313 37.500 0.00 0.00 31.53 2.24
2197 2366 5.746284 TGGTTCCCATTGTATTTCGTATCA 58.254 37.500 0.00 0.00 0.00 2.15
2198 2367 6.181190 TGGTTCCCATTGTATTTCGTATCAA 58.819 36.000 0.00 0.00 0.00 2.57
2199 2368 6.659668 TGGTTCCCATTGTATTTCGTATCAAA 59.340 34.615 0.00 0.00 0.00 2.69
2200 2369 7.340743 TGGTTCCCATTGTATTTCGTATCAAAT 59.659 33.333 0.00 0.00 0.00 2.32
2201 2370 8.194769 GGTTCCCATTGTATTTCGTATCAAATT 58.805 33.333 0.00 0.00 0.00 1.82
2202 2371 9.581099 GTTCCCATTGTATTTCGTATCAAATTT 57.419 29.630 0.00 0.00 0.00 1.82
2204 2373 9.579768 TCCCATTGTATTTCGTATCAAATTTTG 57.420 29.630 2.59 2.59 0.00 2.44
2205 2374 9.579768 CCCATTGTATTTCGTATCAAATTTTGA 57.420 29.630 13.88 13.88 45.01 2.69
2235 2404 8.502161 AGATTAAACTAACAAAATGTTCACGC 57.498 30.769 0.00 0.00 40.22 5.34
2236 2405 8.132362 AGATTAAACTAACAAAATGTTCACGCA 58.868 29.630 0.00 0.00 40.22 5.24
2237 2406 8.810652 ATTAAACTAACAAAATGTTCACGCAT 57.189 26.923 0.00 0.00 40.22 4.73
2238 2407 6.509317 AAACTAACAAAATGTTCACGCATG 57.491 33.333 0.00 0.00 40.22 4.06
2239 2408 5.181690 ACTAACAAAATGTTCACGCATGT 57.818 34.783 0.00 0.00 40.22 3.21
2240 2409 5.212194 ACTAACAAAATGTTCACGCATGTC 58.788 37.500 0.00 0.00 40.22 3.06
2241 2410 3.706802 ACAAAATGTTCACGCATGTCA 57.293 38.095 0.00 0.00 0.00 3.58
2242 2411 3.371168 ACAAAATGTTCACGCATGTCAC 58.629 40.909 0.00 0.00 0.00 3.67
2243 2412 2.704725 AAATGTTCACGCATGTCACC 57.295 45.000 0.00 0.00 0.00 4.02
2244 2413 1.603456 AATGTTCACGCATGTCACCA 58.397 45.000 0.00 0.00 0.00 4.17
2245 2414 1.603456 ATGTTCACGCATGTCACCAA 58.397 45.000 0.00 0.00 0.00 3.67
2246 2415 1.383523 TGTTCACGCATGTCACCAAA 58.616 45.000 0.00 0.00 0.00 3.28
2247 2416 1.064803 TGTTCACGCATGTCACCAAAC 59.935 47.619 0.00 0.00 0.00 2.93
2248 2417 1.064803 GTTCACGCATGTCACCAAACA 59.935 47.619 0.00 0.00 0.00 2.83
2249 2418 1.603456 TCACGCATGTCACCAAACAT 58.397 45.000 0.00 0.00 40.49 2.71
2250 2419 1.952990 TCACGCATGTCACCAAACATT 59.047 42.857 0.00 0.00 37.78 2.71
2251 2420 3.142174 TCACGCATGTCACCAAACATTA 58.858 40.909 0.00 0.00 37.78 1.90
2252 2421 3.755905 TCACGCATGTCACCAAACATTAT 59.244 39.130 0.00 0.00 37.78 1.28
2253 2422 4.938226 TCACGCATGTCACCAAACATTATA 59.062 37.500 0.00 0.00 37.78 0.98
2254 2423 5.588246 TCACGCATGTCACCAAACATTATAT 59.412 36.000 0.00 0.00 37.78 0.86
2255 2424 6.094742 TCACGCATGTCACCAAACATTATATT 59.905 34.615 0.00 0.00 37.78 1.28
2256 2425 6.751425 CACGCATGTCACCAAACATTATATTT 59.249 34.615 0.00 0.00 37.78 1.40
2257 2426 7.275341 CACGCATGTCACCAAACATTATATTTT 59.725 33.333 0.00 0.00 37.78 1.82
2258 2427 7.816995 ACGCATGTCACCAAACATTATATTTTT 59.183 29.630 0.00 0.00 37.78 1.94
2287 2456 9.787532 AAACTATGTTCAAATACGAATCCAATG 57.212 29.630 0.00 0.00 0.00 2.82
2288 2457 8.731275 ACTATGTTCAAATACGAATCCAATGA 57.269 30.769 0.00 0.00 0.00 2.57
2289 2458 9.173021 ACTATGTTCAAATACGAATCCAATGAA 57.827 29.630 0.00 0.00 0.00 2.57
2308 2477 9.763465 CCAATGAAATAATTTTTCTTGACATGC 57.237 29.630 0.00 0.00 0.00 4.06
2320 2489 9.932699 TTTTTCTTGACATGCATTAACATTTTG 57.067 25.926 0.00 0.00 0.00 2.44
2321 2490 8.659925 TTTCTTGACATGCATTAACATTTTGT 57.340 26.923 0.00 0.00 0.00 2.83
2322 2491 8.659925 TTCTTGACATGCATTAACATTTTGTT 57.340 26.923 0.00 0.00 43.88 2.83
2323 2492 9.755804 TTCTTGACATGCATTAACATTTTGTTA 57.244 25.926 0.00 0.00 41.45 2.41
2324 2493 9.409312 TCTTGACATGCATTAACATTTTGTTAG 57.591 29.630 0.00 0.00 42.93 2.34
2325 2494 9.195411 CTTGACATGCATTAACATTTTGTTAGT 57.805 29.630 0.00 0.00 42.93 2.24
2326 2495 9.539825 TTGACATGCATTAACATTTTGTTAGTT 57.460 25.926 0.00 0.00 42.93 2.24
2367 2536 5.440207 TGGTACAAACTATAAAGGGGACC 57.560 43.478 0.00 0.00 45.14 4.46
2381 2550 2.904697 GGGACCTATAAACCAGGACG 57.095 55.000 0.00 0.00 36.61 4.79
2382 2551 1.415289 GGGACCTATAAACCAGGACGG 59.585 57.143 0.00 0.00 42.50 4.79
2383 2552 2.391678 GGACCTATAAACCAGGACGGA 58.608 52.381 0.00 0.00 38.63 4.69
2384 2553 2.767960 GGACCTATAAACCAGGACGGAA 59.232 50.000 0.00 0.00 38.63 4.30
2385 2554 3.181468 GGACCTATAAACCAGGACGGAAG 60.181 52.174 0.00 0.00 38.63 3.46
2401 2570 5.635417 ACGGAAGTAGTAAGTTACAGACC 57.365 43.478 15.28 9.40 46.88 3.85
2402 2571 5.072741 ACGGAAGTAGTAAGTTACAGACCA 58.927 41.667 15.28 0.00 46.88 4.02
2403 2572 5.182760 ACGGAAGTAGTAAGTTACAGACCAG 59.817 44.000 15.28 9.16 46.88 4.00
2404 2573 5.413833 CGGAAGTAGTAAGTTACAGACCAGA 59.586 44.000 15.28 0.00 0.00 3.86
2405 2574 6.403418 CGGAAGTAGTAAGTTACAGACCAGAG 60.403 46.154 15.28 2.61 0.00 3.35
2406 2575 6.127675 GGAAGTAGTAAGTTACAGACCAGAGG 60.128 46.154 15.28 0.00 0.00 3.69
2407 2576 5.262804 AGTAGTAAGTTACAGACCAGAGGG 58.737 45.833 15.28 0.00 41.29 4.30
2408 2577 4.399483 AGTAAGTTACAGACCAGAGGGA 57.601 45.455 15.28 0.00 38.05 4.20
2409 2578 4.748701 AGTAAGTTACAGACCAGAGGGAA 58.251 43.478 15.28 0.00 38.05 3.97
2410 2579 5.152934 AGTAAGTTACAGACCAGAGGGAAA 58.847 41.667 15.28 0.00 38.05 3.13
2411 2580 4.353383 AAGTTACAGACCAGAGGGAAAC 57.647 45.455 0.00 0.00 38.05 2.78
2424 2593 3.191182 GGAAACCTATGGCCCAGTG 57.809 57.895 0.00 0.00 0.00 3.66
2425 2594 0.623723 GGAAACCTATGGCCCAGTGA 59.376 55.000 0.00 0.00 0.00 3.41
2426 2595 1.215423 GGAAACCTATGGCCCAGTGAT 59.785 52.381 0.00 0.00 0.00 3.06
2427 2596 2.441750 GGAAACCTATGGCCCAGTGATA 59.558 50.000 0.00 0.00 0.00 2.15
2428 2597 3.477530 GAAACCTATGGCCCAGTGATAC 58.522 50.000 0.00 0.00 0.00 2.24
2429 2598 2.496679 ACCTATGGCCCAGTGATACT 57.503 50.000 0.00 0.00 0.00 2.12
2430 2599 2.050144 ACCTATGGCCCAGTGATACTG 58.950 52.381 0.00 2.05 45.53 2.74
2431 2600 1.271054 CCTATGGCCCAGTGATACTGC 60.271 57.143 0.00 0.00 44.63 4.40
2432 2601 0.764890 TATGGCCCAGTGATACTGCC 59.235 55.000 0.00 3.77 44.63 4.85
2433 2602 0.990282 ATGGCCCAGTGATACTGCCT 60.990 55.000 0.00 0.00 44.63 4.75
2434 2603 1.153086 GGCCCAGTGATACTGCCTG 60.153 63.158 3.49 0.00 44.63 4.85
2435 2604 1.604378 GCCCAGTGATACTGCCTGT 59.396 57.895 3.49 0.00 44.63 4.00
2436 2605 0.830648 GCCCAGTGATACTGCCTGTA 59.169 55.000 3.49 0.00 44.63 2.74
2437 2606 1.417890 GCCCAGTGATACTGCCTGTAT 59.582 52.381 3.49 0.00 44.63 2.29
2448 2617 4.851639 ACTGCCTGTATCCATTTTCTCT 57.148 40.909 0.00 0.00 0.00 3.10
2449 2618 4.521146 ACTGCCTGTATCCATTTTCTCTG 58.479 43.478 0.00 0.00 0.00 3.35
2450 2619 4.225942 ACTGCCTGTATCCATTTTCTCTGA 59.774 41.667 0.00 0.00 0.00 3.27
2451 2620 4.517285 TGCCTGTATCCATTTTCTCTGAC 58.483 43.478 0.00 0.00 0.00 3.51
2452 2621 3.879892 GCCTGTATCCATTTTCTCTGACC 59.120 47.826 0.00 0.00 0.00 4.02
2453 2622 4.626287 GCCTGTATCCATTTTCTCTGACCA 60.626 45.833 0.00 0.00 0.00 4.02
2454 2623 5.688807 CCTGTATCCATTTTCTCTGACCAT 58.311 41.667 0.00 0.00 0.00 3.55
2455 2624 6.125029 CCTGTATCCATTTTCTCTGACCATT 58.875 40.000 0.00 0.00 0.00 3.16
2456 2625 6.604795 CCTGTATCCATTTTCTCTGACCATTT 59.395 38.462 0.00 0.00 0.00 2.32
2457 2626 7.201767 CCTGTATCCATTTTCTCTGACCATTTC 60.202 40.741 0.00 0.00 0.00 2.17
2458 2627 6.603201 TGTATCCATTTTCTCTGACCATTTCC 59.397 38.462 0.00 0.00 0.00 3.13
2459 2628 4.996793 TCCATTTTCTCTGACCATTTCCA 58.003 39.130 0.00 0.00 0.00 3.53
2460 2629 5.582953 TCCATTTTCTCTGACCATTTCCAT 58.417 37.500 0.00 0.00 0.00 3.41
2461 2630 5.419788 TCCATTTTCTCTGACCATTTCCATG 59.580 40.000 0.00 0.00 0.00 3.66
2462 2631 4.789012 TTTTCTCTGACCATTTCCATGC 57.211 40.909 0.00 0.00 0.00 4.06
2463 2632 2.425143 TCTCTGACCATTTCCATGCC 57.575 50.000 0.00 0.00 0.00 4.40
2464 2633 1.019673 CTCTGACCATTTCCATGCCG 58.980 55.000 0.00 0.00 0.00 5.69
2465 2634 0.327924 TCTGACCATTTCCATGCCGT 59.672 50.000 0.00 0.00 0.00 5.68
2466 2635 0.452987 CTGACCATTTCCATGCCGTG 59.547 55.000 0.00 0.00 0.00 4.94
2467 2636 0.037447 TGACCATTTCCATGCCGTGA 59.963 50.000 0.00 0.00 0.00 4.35
2468 2637 0.734889 GACCATTTCCATGCCGTGAG 59.265 55.000 0.00 0.00 0.00 3.51
2469 2638 0.327924 ACCATTTCCATGCCGTGAGA 59.672 50.000 0.00 0.00 0.00 3.27
2470 2639 1.064463 ACCATTTCCATGCCGTGAGAT 60.064 47.619 0.00 0.00 0.00 2.75
2471 2640 2.172505 ACCATTTCCATGCCGTGAGATA 59.827 45.455 0.00 0.00 0.00 1.98
2472 2641 3.213506 CCATTTCCATGCCGTGAGATAA 58.786 45.455 0.00 0.00 0.00 1.75
2473 2642 3.822735 CCATTTCCATGCCGTGAGATAAT 59.177 43.478 0.00 0.00 0.00 1.28
2474 2643 5.003160 CCATTTCCATGCCGTGAGATAATA 58.997 41.667 0.00 0.00 0.00 0.98
2475 2644 5.122869 CCATTTCCATGCCGTGAGATAATAG 59.877 44.000 0.00 0.00 0.00 1.73
2476 2645 3.319137 TCCATGCCGTGAGATAATAGC 57.681 47.619 0.00 0.00 0.00 2.97
2477 2646 2.899900 TCCATGCCGTGAGATAATAGCT 59.100 45.455 0.00 0.00 0.00 3.32
2478 2647 4.086457 TCCATGCCGTGAGATAATAGCTA 58.914 43.478 0.00 0.00 0.00 3.32
2479 2648 4.526650 TCCATGCCGTGAGATAATAGCTAA 59.473 41.667 0.00 0.00 0.00 3.09
2480 2649 4.867047 CCATGCCGTGAGATAATAGCTAAG 59.133 45.833 0.00 0.00 0.00 2.18
2481 2650 5.336770 CCATGCCGTGAGATAATAGCTAAGA 60.337 44.000 0.00 0.00 0.00 2.10
2482 2651 5.122512 TGCCGTGAGATAATAGCTAAGAC 57.877 43.478 0.00 0.00 0.00 3.01
2483 2652 4.583073 TGCCGTGAGATAATAGCTAAGACA 59.417 41.667 0.00 0.00 0.00 3.41
2484 2653 5.157781 GCCGTGAGATAATAGCTAAGACAG 58.842 45.833 0.00 0.00 0.00 3.51
2485 2654 5.704888 CCGTGAGATAATAGCTAAGACAGG 58.295 45.833 0.00 0.00 0.00 4.00
2486 2655 5.336055 CCGTGAGATAATAGCTAAGACAGGG 60.336 48.000 0.00 4.62 0.00 4.45
2487 2656 5.474825 GTGAGATAATAGCTAAGACAGGGC 58.525 45.833 0.00 0.00 0.00 5.19
2488 2657 5.011125 GTGAGATAATAGCTAAGACAGGGCA 59.989 44.000 0.00 0.00 0.00 5.36
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.224592 GGTCATGTAGGGGTGCCAG 59.775 63.158 0.00 0.00 0.00 4.85
3 4 0.546122 TCATGGTCATGTAGGGGTGC 59.454 55.000 10.32 0.00 39.72 5.01
5 6 2.270434 AGTCATGGTCATGTAGGGGT 57.730 50.000 10.32 0.00 39.72 4.95
6 7 3.967326 TCTTAGTCATGGTCATGTAGGGG 59.033 47.826 10.32 1.81 39.72 4.79
7 8 4.405680 TGTCTTAGTCATGGTCATGTAGGG 59.594 45.833 10.32 0.96 39.72 3.53
8 9 5.598416 TGTCTTAGTCATGGTCATGTAGG 57.402 43.478 10.32 0.00 39.72 3.18
9 10 8.633561 TCTAATGTCTTAGTCATGGTCATGTAG 58.366 37.037 10.32 5.31 35.88 2.74
10 11 8.533569 TCTAATGTCTTAGTCATGGTCATGTA 57.466 34.615 10.32 0.00 35.88 2.29
11 12 7.418368 CCTCTAATGTCTTAGTCATGGTCATGT 60.418 40.741 10.32 0.00 35.88 3.21
12 13 6.927936 CCTCTAATGTCTTAGTCATGGTCATG 59.072 42.308 4.67 4.67 36.51 3.07
13 14 6.841229 TCCTCTAATGTCTTAGTCATGGTCAT 59.159 38.462 0.00 0.00 36.51 3.06
14 15 6.194967 TCCTCTAATGTCTTAGTCATGGTCA 58.805 40.000 0.00 0.00 36.51 4.02
15 16 6.716934 TCCTCTAATGTCTTAGTCATGGTC 57.283 41.667 0.00 0.00 36.51 4.02
30 31 7.698163 ATCAGGTATGGTTTCTTCCTCTAAT 57.302 36.000 0.00 0.00 0.00 1.73
39 40 6.575244 TTGTGGATATCAGGTATGGTTTCT 57.425 37.500 4.83 0.00 0.00 2.52
53 54 3.287222 CGGGTTCATGGTTTGTGGATAT 58.713 45.455 0.00 0.00 0.00 1.63
54 55 2.619332 CCGGGTTCATGGTTTGTGGATA 60.619 50.000 0.00 0.00 0.00 2.59
67 68 2.047655 GATCGTGTGCCGGGTTCA 60.048 61.111 2.18 0.00 37.11 3.18
112 113 3.300388 AGAGAGGATTCTGATTGCGGTA 58.700 45.455 0.00 0.00 32.53 4.02
116 117 3.876320 GTCCAAGAGAGGATTCTGATTGC 59.124 47.826 0.00 0.00 40.42 3.56
122 123 4.618378 AGGTAGTCCAAGAGAGGATTCT 57.382 45.455 0.00 0.00 40.42 2.40
124 125 4.954089 AGAAGGTAGTCCAAGAGAGGATT 58.046 43.478 0.00 0.00 40.42 3.01
129 130 4.936802 AGCTTAGAAGGTAGTCCAAGAGA 58.063 43.478 0.00 0.00 34.49 3.10
144 145 0.107017 GCATTGGCCAGGAGCTTAGA 60.107 55.000 5.11 0.00 43.05 2.10
146 147 0.394762 CAGCATTGGCCAGGAGCTTA 60.395 55.000 21.57 0.00 42.56 3.09
176 177 2.280797 GGCTCTGCCGTTGTGACA 60.281 61.111 0.00 0.00 39.62 3.58
232 236 3.830178 TCAGACCGTTCAAGTAAGGATGA 59.170 43.478 0.00 0.00 0.00 2.92
263 267 2.580783 CCTATATATGGTTGGGGGTGGG 59.419 54.545 0.00 0.00 0.00 4.61
267 271 2.504175 CGGTCCTATATATGGTTGGGGG 59.496 54.545 0.00 0.00 0.00 5.40
279 283 2.430465 GACGAGCCATACGGTCCTATA 58.570 52.381 0.00 0.00 35.44 1.31
280 284 1.245732 GACGAGCCATACGGTCCTAT 58.754 55.000 0.00 0.00 35.44 2.57
281 285 1.162181 CGACGAGCCATACGGTCCTA 61.162 60.000 0.00 0.00 35.44 2.94
282 286 2.478890 CGACGAGCCATACGGTCCT 61.479 63.158 0.00 0.00 35.44 3.85
291 295 1.379977 ATCCTTCTCCGACGAGCCA 60.380 57.895 0.00 0.00 35.94 4.75
293 297 0.030101 CAGATCCTTCTCCGACGAGC 59.970 60.000 0.00 0.00 35.94 5.03
344 348 2.275134 TCATTGTCTTGGCTTCAGCA 57.725 45.000 0.30 0.00 44.36 4.41
347 351 4.341806 ACATTGTTCATTGTCTTGGCTTCA 59.658 37.500 0.00 0.00 0.00 3.02
377 382 4.711355 TCGCTTTAGGCCCTAGTAGTTTTA 59.289 41.667 0.00 0.00 37.74 1.52
406 411 4.357947 TCAGTGGTGAGGACGCGC 62.358 66.667 5.73 0.00 0.00 6.86
432 494 2.835431 CTCCCCTCTGCCGACGAT 60.835 66.667 0.00 0.00 0.00 3.73
459 521 2.678934 AGTTCCTCCAGCGCCGTA 60.679 61.111 2.29 0.00 0.00 4.02
498 561 3.926616 TCGAAGAAAGAAAGGCGATCTT 58.073 40.909 2.53 2.53 38.75 2.40
521 585 2.814336 GTGCATCGTTTTCTTTCTCCCT 59.186 45.455 0.00 0.00 0.00 4.20
576 643 5.115923 CGCGCGTGTTAATGATGTAGTATTA 59.884 40.000 24.19 0.00 0.00 0.98
579 646 2.784928 CGCGCGTGTTAATGATGTAGTA 59.215 45.455 24.19 0.00 0.00 1.82
611 682 7.031975 ACTAGTAGTACTTTGCAACCGTATTC 58.968 38.462 8.40 0.01 0.00 1.75
636 707 8.796475 CAAGGGTTGTTTGTACTAGTACTAGTA 58.204 37.037 30.50 30.50 43.98 1.82
638 709 7.095270 CCAAGGGTTGTTTGTACTAGTACTAG 58.905 42.308 28.56 25.30 37.00 2.57
639 710 6.554605 ACCAAGGGTTGTTTGTACTAGTACTA 59.445 38.462 28.56 20.97 32.52 1.82
640 711 5.367644 ACCAAGGGTTGTTTGTACTAGTACT 59.632 40.000 28.56 0.00 32.52 2.73
641 712 5.614308 ACCAAGGGTTGTTTGTACTAGTAC 58.386 41.667 23.58 23.58 32.13 2.73
642 713 5.603813 AGACCAAGGGTTGTTTGTACTAGTA 59.396 40.000 0.00 0.00 35.25 1.82
643 714 4.411212 AGACCAAGGGTTGTTTGTACTAGT 59.589 41.667 0.00 0.00 35.25 2.57
644 715 4.969484 AGACCAAGGGTTGTTTGTACTAG 58.031 43.478 0.00 0.00 35.25 2.57
703 774 2.681778 CAGTGGAGGGACGGCTCT 60.682 66.667 0.00 0.00 0.00 4.09
704 775 4.459089 GCAGTGGAGGGACGGCTC 62.459 72.222 0.00 0.00 34.58 4.70
720 791 8.784043 CCAACTAAATGGATATTACTTAGTGGC 58.216 37.037 0.00 0.00 43.54 5.01
728 799 6.572314 GCATGGCCCAACTAAATGGATATTAC 60.572 42.308 0.00 0.00 43.54 1.89
797 899 0.325203 GAGTGGAGAGGAGAGGGCTT 60.325 60.000 0.00 0.00 0.00 4.35
798 900 1.309688 GAGTGGAGAGGAGAGGGCT 59.690 63.158 0.00 0.00 0.00 5.19
813 915 4.458829 TGGGGCGATCGAGGGAGT 62.459 66.667 21.57 0.00 0.00 3.85
918 1030 2.434359 GGCCTGTCGTGCTGGTAC 60.434 66.667 0.00 0.00 38.33 3.34
993 1105 2.705658 CTCTTCCTGCCCCATGTATGTA 59.294 50.000 0.00 0.00 0.00 2.29
994 1106 1.492176 CTCTTCCTGCCCCATGTATGT 59.508 52.381 0.00 0.00 0.00 2.29
995 1107 1.202855 CCTCTTCCTGCCCCATGTATG 60.203 57.143 0.00 0.00 0.00 2.39
996 1108 1.143813 CCTCTTCCTGCCCCATGTAT 58.856 55.000 0.00 0.00 0.00 2.29
1036 1148 2.262915 CTCCACACGCTCCCACTC 59.737 66.667 0.00 0.00 0.00 3.51
1037 1149 3.314331 CCTCCACACGCTCCCACT 61.314 66.667 0.00 0.00 0.00 4.00
1135 1247 1.648720 CACCACCACGTGCTTCAAG 59.351 57.895 10.91 0.00 31.34 3.02
1142 1254 4.866224 TGCCACCACCACCACGTG 62.866 66.667 9.08 9.08 0.00 4.49
1145 1257 3.683937 GCATGCCACCACCACCAC 61.684 66.667 6.36 0.00 0.00 4.16
1233 1345 0.183014 CCCTCGAGTAGTCCCTAGCA 59.817 60.000 12.31 0.00 0.00 3.49
1236 1348 1.535685 GGCCCTCGAGTAGTCCCTA 59.464 63.158 12.31 0.00 0.00 3.53
1241 1353 2.439883 GGACGGCCCTCGAGTAGT 60.440 66.667 12.31 5.39 42.43 2.73
1287 1399 1.599518 CTTGGTGCACGCCAGGTAA 60.600 57.895 11.45 0.00 40.01 2.85
1296 1408 4.077188 GCGACGCTCTTGGTGCAC 62.077 66.667 13.73 8.80 0.00 4.57
1319 1431 1.972978 CCGGTCTTCTTCTTCCCGT 59.027 57.895 0.00 0.00 36.98 5.28
1418 1536 2.742372 GCTCCATCACGCCGTTGT 60.742 61.111 0.00 0.00 0.00 3.32
1491 1609 9.090103 TGGATTGGGAGATAATTACTAGTACTG 57.910 37.037 5.39 0.00 0.00 2.74
1492 1610 9.845214 ATGGATTGGGAGATAATTACTAGTACT 57.155 33.333 0.91 0.00 0.00 2.73
1494 1612 9.837681 TGATGGATTGGGAGATAATTACTAGTA 57.162 33.333 0.00 0.00 0.00 1.82
1495 1613 8.742125 TGATGGATTGGGAGATAATTACTAGT 57.258 34.615 0.00 0.00 0.00 2.57
1496 1614 9.829507 GATGATGGATTGGGAGATAATTACTAG 57.170 37.037 0.00 0.00 0.00 2.57
1511 1632 6.320418 TCCAACAAGATGAAGATGATGGATTG 59.680 38.462 0.53 0.00 39.98 2.67
1515 1636 6.546403 AGAATCCAACAAGATGAAGATGATGG 59.454 38.462 0.00 0.00 38.09 3.51
1516 1637 7.569639 AGAATCCAACAAGATGAAGATGATG 57.430 36.000 0.00 0.00 0.00 3.07
1523 1644 8.355169 CAAAGAAGAAGAATCCAACAAGATGAA 58.645 33.333 0.00 0.00 0.00 2.57
1526 1647 7.503566 TGACAAAGAAGAAGAATCCAACAAGAT 59.496 33.333 0.00 0.00 0.00 2.40
1529 1650 7.428020 CATGACAAAGAAGAAGAATCCAACAA 58.572 34.615 0.00 0.00 0.00 2.83
1531 1652 5.860716 GCATGACAAAGAAGAAGAATCCAAC 59.139 40.000 0.00 0.00 0.00 3.77
1532 1653 5.535783 TGCATGACAAAGAAGAAGAATCCAA 59.464 36.000 0.00 0.00 0.00 3.53
1533 1654 5.072055 TGCATGACAAAGAAGAAGAATCCA 58.928 37.500 0.00 0.00 0.00 3.41
1534 1655 5.633830 TGCATGACAAAGAAGAAGAATCC 57.366 39.130 0.00 0.00 0.00 3.01
1535 1656 6.034591 CCATGCATGACAAAGAAGAAGAATC 58.965 40.000 28.31 0.00 0.00 2.52
1536 1657 5.479375 ACCATGCATGACAAAGAAGAAGAAT 59.521 36.000 28.31 0.00 0.00 2.40
1537 1658 4.828939 ACCATGCATGACAAAGAAGAAGAA 59.171 37.500 28.31 0.00 0.00 2.52
1540 1661 5.291178 CAAACCATGCATGACAAAGAAGAA 58.709 37.500 28.31 0.00 0.00 2.52
1566 1691 8.622948 ATTAACCTTGACCAGAAAGAAACTAG 57.377 34.615 0.00 0.00 0.00 2.57
1576 1701 7.415989 CGCTACTACTAATTAACCTTGACCAGA 60.416 40.741 0.00 0.00 0.00 3.86
1578 1703 6.406177 CCGCTACTACTAATTAACCTTGACCA 60.406 42.308 0.00 0.00 0.00 4.02
1579 1704 5.981915 CCGCTACTACTAATTAACCTTGACC 59.018 44.000 0.00 0.00 0.00 4.02
1580 1705 6.474751 CACCGCTACTACTAATTAACCTTGAC 59.525 42.308 0.00 0.00 0.00 3.18
1581 1706 6.153340 ACACCGCTACTACTAATTAACCTTGA 59.847 38.462 0.00 0.00 0.00 3.02
1582 1707 6.255020 CACACCGCTACTACTAATTAACCTTG 59.745 42.308 0.00 0.00 0.00 3.61
1583 1708 6.153340 TCACACCGCTACTACTAATTAACCTT 59.847 38.462 0.00 0.00 0.00 3.50
1584 1709 5.653769 TCACACCGCTACTACTAATTAACCT 59.346 40.000 0.00 0.00 0.00 3.50
1585 1710 5.894807 TCACACCGCTACTACTAATTAACC 58.105 41.667 0.00 0.00 0.00 2.85
1586 1711 9.520204 TTTATCACACCGCTACTACTAATTAAC 57.480 33.333 0.00 0.00 0.00 2.01
1587 1712 9.520204 GTTTATCACACCGCTACTACTAATTAA 57.480 33.333 0.00 0.00 0.00 1.40
1588 1713 8.906867 AGTTTATCACACCGCTACTACTAATTA 58.093 33.333 0.00 0.00 0.00 1.40
1589 1714 7.779073 AGTTTATCACACCGCTACTACTAATT 58.221 34.615 0.00 0.00 0.00 1.40
1590 1715 7.344095 AGTTTATCACACCGCTACTACTAAT 57.656 36.000 0.00 0.00 0.00 1.73
1591 1716 6.764308 AGTTTATCACACCGCTACTACTAA 57.236 37.500 0.00 0.00 0.00 2.24
1592 1717 6.764308 AAGTTTATCACACCGCTACTACTA 57.236 37.500 0.00 0.00 0.00 1.82
1593 1718 5.656213 AAGTTTATCACACCGCTACTACT 57.344 39.130 0.00 0.00 0.00 2.57
1594 1719 5.063060 CCAAAGTTTATCACACCGCTACTAC 59.937 44.000 0.00 0.00 0.00 2.73
1595 1720 5.172934 CCAAAGTTTATCACACCGCTACTA 58.827 41.667 0.00 0.00 0.00 1.82
1596 1721 4.000988 CCAAAGTTTATCACACCGCTACT 58.999 43.478 0.00 0.00 0.00 2.57
1597 1722 3.749609 ACCAAAGTTTATCACACCGCTAC 59.250 43.478 0.00 0.00 0.00 3.58
1598 1723 3.749088 CACCAAAGTTTATCACACCGCTA 59.251 43.478 0.00 0.00 0.00 4.26
1599 1724 2.552315 CACCAAAGTTTATCACACCGCT 59.448 45.455 0.00 0.00 0.00 5.52
1600 1725 2.550606 TCACCAAAGTTTATCACACCGC 59.449 45.455 0.00 0.00 0.00 5.68
1601 1726 5.371115 AATCACCAAAGTTTATCACACCG 57.629 39.130 0.00 0.00 0.00 4.94
1602 1727 6.657541 TCCTAATCACCAAAGTTTATCACACC 59.342 38.462 0.00 0.00 0.00 4.16
1603 1728 7.606456 TCTCCTAATCACCAAAGTTTATCACAC 59.394 37.037 0.00 0.00 0.00 3.82
1604 1729 7.685481 TCTCCTAATCACCAAAGTTTATCACA 58.315 34.615 0.00 0.00 0.00 3.58
1605 1730 8.561738 TTCTCCTAATCACCAAAGTTTATCAC 57.438 34.615 0.00 0.00 0.00 3.06
1626 1752 7.148722 CCTGACGAATCAAACTTTCTACTTCTC 60.149 40.741 0.00 0.00 33.30 2.87
1627 1753 6.647067 CCTGACGAATCAAACTTTCTACTTCT 59.353 38.462 0.00 0.00 33.30 2.85
1628 1754 6.128526 CCCTGACGAATCAAACTTTCTACTTC 60.129 42.308 0.00 0.00 33.30 3.01
1629 1755 5.701290 CCCTGACGAATCAAACTTTCTACTT 59.299 40.000 0.00 0.00 33.30 2.24
1630 1756 5.011738 TCCCTGACGAATCAAACTTTCTACT 59.988 40.000 0.00 0.00 33.30 2.57
1644 1770 3.118555 TGTGTCTTCTTTTCCCTGACGAA 60.119 43.478 0.00 0.00 0.00 3.85
1645 1771 2.432874 TGTGTCTTCTTTTCCCTGACGA 59.567 45.455 0.00 0.00 0.00 4.20
1646 1772 2.544267 GTGTGTCTTCTTTTCCCTGACG 59.456 50.000 0.00 0.00 0.00 4.35
1647 1773 3.809905 AGTGTGTCTTCTTTTCCCTGAC 58.190 45.455 0.00 0.00 0.00 3.51
1648 1774 4.503714 AAGTGTGTCTTCTTTTCCCTGA 57.496 40.909 0.00 0.00 0.00 3.86
1649 1775 6.884280 ATTAAGTGTGTCTTCTTTTCCCTG 57.116 37.500 0.00 0.00 37.56 4.45
1650 1776 7.684428 GCAAATTAAGTGTGTCTTCTTTTCCCT 60.684 37.037 0.00 0.00 37.56 4.20
1651 1777 6.420903 GCAAATTAAGTGTGTCTTCTTTTCCC 59.579 38.462 0.00 0.00 37.56 3.97
1652 1778 6.978080 TGCAAATTAAGTGTGTCTTCTTTTCC 59.022 34.615 0.00 0.00 37.56 3.13
1653 1779 7.985634 TGCAAATTAAGTGTGTCTTCTTTTC 57.014 32.000 0.00 0.00 37.56 2.29
1654 1780 7.981225 ACATGCAAATTAAGTGTGTCTTCTTTT 59.019 29.630 0.00 0.00 37.56 2.27
1655 1781 7.436080 CACATGCAAATTAAGTGTGTCTTCTTT 59.564 33.333 6.25 0.00 37.56 2.52
1656 1782 6.919662 CACATGCAAATTAAGTGTGTCTTCTT 59.080 34.615 6.25 0.00 37.56 2.52
1657 1783 6.441274 CACATGCAAATTAAGTGTGTCTTCT 58.559 36.000 6.25 0.00 37.56 2.85
1658 1784 6.680055 CACATGCAAATTAAGTGTGTCTTC 57.320 37.500 6.25 0.00 37.56 2.87
1669 1795 4.826733 AGTCTTCACCACACATGCAAATTA 59.173 37.500 0.00 0.00 0.00 1.40
1676 1802 3.732212 TCTTCAGTCTTCACCACACATG 58.268 45.455 0.00 0.00 0.00 3.21
1684 1810 4.502962 CATCCTTCCTCTTCAGTCTTCAC 58.497 47.826 0.00 0.00 0.00 3.18
1685 1811 3.055530 GCATCCTTCCTCTTCAGTCTTCA 60.056 47.826 0.00 0.00 0.00 3.02
1686 1812 3.055530 TGCATCCTTCCTCTTCAGTCTTC 60.056 47.826 0.00 0.00 0.00 2.87
1687 1813 2.909006 TGCATCCTTCCTCTTCAGTCTT 59.091 45.455 0.00 0.00 0.00 3.01
1688 1814 2.544721 TGCATCCTTCCTCTTCAGTCT 58.455 47.619 0.00 0.00 0.00 3.24
1689 1815 3.118482 TGATGCATCCTTCCTCTTCAGTC 60.118 47.826 23.67 0.00 0.00 3.51
1690 1816 2.842496 TGATGCATCCTTCCTCTTCAGT 59.158 45.455 23.67 0.00 0.00 3.41
1703 1829 6.803154 TGAAGATTGAGATGATGATGCATC 57.197 37.500 20.14 20.14 43.88 3.91
1731 1876 5.324409 TCTGAACCCACAGCAATAGAAATT 58.676 37.500 0.00 0.00 37.75 1.82
1732 1877 4.922206 TCTGAACCCACAGCAATAGAAAT 58.078 39.130 0.00 0.00 37.75 2.17
1734 1879 4.574674 ATCTGAACCCACAGCAATAGAA 57.425 40.909 0.00 0.00 37.75 2.10
1736 1881 4.701651 TGAAATCTGAACCCACAGCAATAG 59.298 41.667 0.00 0.00 37.75 1.73
1737 1882 4.661222 TGAAATCTGAACCCACAGCAATA 58.339 39.130 0.00 0.00 37.75 1.90
1738 1883 3.499338 TGAAATCTGAACCCACAGCAAT 58.501 40.909 0.00 0.00 37.75 3.56
1740 1885 2.106338 TCTGAAATCTGAACCCACAGCA 59.894 45.455 0.00 0.00 37.75 4.41
1742 1887 4.756084 GTTCTGAAATCTGAACCCACAG 57.244 45.455 17.48 0.00 44.13 3.66
1750 1895 9.676861 ACAATAATCTGATGTTCTGAAATCTGA 57.323 29.630 16.34 16.34 35.88 3.27
1751 1896 9.717892 CACAATAATCTGATGTTCTGAAATCTG 57.282 33.333 0.00 3.13 0.00 2.90
1752 1897 8.900781 CCACAATAATCTGATGTTCTGAAATCT 58.099 33.333 0.00 0.00 0.00 2.40
1753 1898 8.133627 CCCACAATAATCTGATGTTCTGAAATC 58.866 37.037 0.00 0.00 0.00 2.17
1756 1901 6.720309 TCCCACAATAATCTGATGTTCTGAA 58.280 36.000 0.00 0.00 0.00 3.02
1757 1902 6.312141 TCCCACAATAATCTGATGTTCTGA 57.688 37.500 0.00 0.00 0.00 3.27
1758 1903 5.008415 GCTCCCACAATAATCTGATGTTCTG 59.992 44.000 0.00 0.00 0.00 3.02
1759 1904 5.128919 GCTCCCACAATAATCTGATGTTCT 58.871 41.667 0.00 0.00 0.00 3.01
1760 1905 4.276926 GGCTCCCACAATAATCTGATGTTC 59.723 45.833 0.00 0.00 0.00 3.18
1761 1906 4.210331 GGCTCCCACAATAATCTGATGTT 58.790 43.478 0.00 0.00 0.00 2.71
1762 1907 3.745480 CGGCTCCCACAATAATCTGATGT 60.745 47.826 0.00 0.00 0.00 3.06
1763 1908 2.810274 CGGCTCCCACAATAATCTGATG 59.190 50.000 0.00 0.00 0.00 3.07
1764 1909 2.811873 GCGGCTCCCACAATAATCTGAT 60.812 50.000 0.00 0.00 0.00 2.90
1765 1910 1.475034 GCGGCTCCCACAATAATCTGA 60.475 52.381 0.00 0.00 0.00 3.27
1766 1911 0.947244 GCGGCTCCCACAATAATCTG 59.053 55.000 0.00 0.00 0.00 2.90
1767 1912 0.546122 TGCGGCTCCCACAATAATCT 59.454 50.000 0.00 0.00 0.00 2.40
1768 1913 1.609208 ATGCGGCTCCCACAATAATC 58.391 50.000 0.00 0.00 0.00 1.75
1769 1914 2.949177 TATGCGGCTCCCACAATAAT 57.051 45.000 0.00 0.00 0.00 1.28
1770 1915 2.571212 CTTATGCGGCTCCCACAATAA 58.429 47.619 0.00 0.00 0.00 1.40
1773 1918 1.748879 GCTTATGCGGCTCCCACAA 60.749 57.895 0.00 0.00 0.00 3.33
1778 1923 1.134946 ACAAAATGCTTATGCGGCTCC 59.865 47.619 0.00 0.00 43.34 4.70
1782 1927 3.508744 AGGAACAAAATGCTTATGCGG 57.491 42.857 0.00 0.00 43.34 5.69
1794 1939 5.065914 CCATCACAGAGAAGAAGGAACAAA 58.934 41.667 0.00 0.00 0.00 2.83
1800 1945 3.453717 TCCATCCATCACAGAGAAGAAGG 59.546 47.826 0.00 0.00 0.00 3.46
1809 1954 5.695424 ATCTATCCATCCATCCATCACAG 57.305 43.478 0.00 0.00 0.00 3.66
1810 1955 5.548836 TCAATCTATCCATCCATCCATCACA 59.451 40.000 0.00 0.00 0.00 3.58
1811 1956 6.058553 TCAATCTATCCATCCATCCATCAC 57.941 41.667 0.00 0.00 0.00 3.06
1828 1986 5.813383 AGTCAGTGTCATGGAAATCAATCT 58.187 37.500 0.00 0.00 0.00 2.40
1868 2026 4.792068 TGACACTGACAGGGAGAAAATTT 58.208 39.130 12.83 0.00 0.00 1.82
1877 2035 0.673985 TCGAGTTGACACTGACAGGG 59.326 55.000 2.23 2.23 31.22 4.45
1899 2061 1.021390 GGTCAACCTCGGCATGTCAG 61.021 60.000 0.00 0.00 0.00 3.51
1908 2070 0.388649 CCAAGTCTCGGTCAACCTCG 60.389 60.000 0.00 0.00 0.00 4.63
1968 2133 5.552430 TCAGGGCCTCATATTCCTATCTA 57.448 43.478 0.95 0.00 0.00 1.98
1982 2147 2.135189 TGCTACCAATAATCAGGGCCT 58.865 47.619 0.00 0.00 0.00 5.19
1983 2148 2.623416 GTTGCTACCAATAATCAGGGCC 59.377 50.000 0.00 0.00 32.75 5.80
1984 2149 3.287222 TGTTGCTACCAATAATCAGGGC 58.713 45.455 0.00 0.00 32.75 5.19
1986 2151 7.285401 ACCTTTATGTTGCTACCAATAATCAGG 59.715 37.037 0.00 2.68 32.75 3.86
1990 2155 7.834181 ACTGACCTTTATGTTGCTACCAATAAT 59.166 33.333 0.00 0.00 32.75 1.28
1991 2156 7.172342 ACTGACCTTTATGTTGCTACCAATAA 58.828 34.615 0.00 0.00 32.75 1.40
1992 2157 6.717289 ACTGACCTTTATGTTGCTACCAATA 58.283 36.000 0.00 0.00 32.75 1.90
1993 2158 5.570320 ACTGACCTTTATGTTGCTACCAAT 58.430 37.500 0.00 0.00 32.75 3.16
2006 2171 9.597681 CCCTACCTAATCTATAACTGACCTTTA 57.402 37.037 0.00 0.00 0.00 1.85
2010 2175 5.720520 CCCCCTACCTAATCTATAACTGACC 59.279 48.000 0.00 0.00 0.00 4.02
2014 2179 6.817119 AGACCCCCTACCTAATCTATAACT 57.183 41.667 0.00 0.00 0.00 2.24
2015 2180 7.707648 ACTAGACCCCCTACCTAATCTATAAC 58.292 42.308 0.00 0.00 0.00 1.89
2057 2226 1.141881 CTTGCAGATAGACCGCGGT 59.858 57.895 34.89 34.89 0.00 5.68
2059 2228 0.647410 CAACTTGCAGATAGACCGCG 59.353 55.000 0.00 0.00 0.00 6.46
2099 2268 0.309922 CCTCTGTTGCACTGCACTTG 59.690 55.000 2.26 0.00 38.71 3.16
2114 2283 3.406512 AGTTACTATGGACCAGCCTCT 57.593 47.619 0.00 0.00 37.63 3.69
2133 2302 7.774625 AGGTAGTTTCCAGCTAGTACTACTAAG 59.225 40.741 18.45 0.00 40.45 2.18
2140 2309 3.066481 CGGAGGTAGTTTCCAGCTAGTAC 59.934 52.174 0.00 0.00 34.24 2.73
2143 2312 2.099427 GACGGAGGTAGTTTCCAGCTAG 59.901 54.545 0.00 0.00 34.24 3.42
2144 2313 2.097825 GACGGAGGTAGTTTCCAGCTA 58.902 52.381 0.00 0.00 34.24 3.32
2145 2314 0.896226 GACGGAGGTAGTTTCCAGCT 59.104 55.000 0.00 0.00 34.24 4.24
2151 2320 4.850193 TCCGGACGGAGGTAGTTT 57.150 55.556 9.76 0.00 39.76 2.66
2160 2329 1.944709 GGAACCAATAAATCCGGACGG 59.055 52.381 6.12 3.96 0.00 4.79
2176 2345 9.581099 AAATTTGATACGAAATACAATGGGAAC 57.419 29.630 0.00 0.00 0.00 3.62
2178 2347 9.579768 CAAAATTTGATACGAAATACAATGGGA 57.420 29.630 0.00 0.00 0.00 4.37
2179 2348 9.579768 TCAAAATTTGATACGAAATACAATGGG 57.420 29.630 4.03 0.00 34.08 4.00
2209 2378 9.601971 GCGTGAACATTTTGTTAGTTTAATCTA 57.398 29.630 0.00 0.00 41.28 1.98
2210 2379 8.132362 TGCGTGAACATTTTGTTAGTTTAATCT 58.868 29.630 0.00 0.00 41.28 2.40
2211 2380 8.276060 TGCGTGAACATTTTGTTAGTTTAATC 57.724 30.769 0.00 0.00 41.28 1.75
2212 2381 8.698854 CATGCGTGAACATTTTGTTAGTTTAAT 58.301 29.630 0.00 0.00 41.28 1.40
2213 2382 7.702772 ACATGCGTGAACATTTTGTTAGTTTAA 59.297 29.630 14.17 0.00 41.28 1.52
2214 2383 7.197017 ACATGCGTGAACATTTTGTTAGTTTA 58.803 30.769 14.17 0.00 41.28 2.01
2215 2384 6.039616 ACATGCGTGAACATTTTGTTAGTTT 58.960 32.000 14.17 0.00 41.28 2.66
2216 2385 5.587289 ACATGCGTGAACATTTTGTTAGTT 58.413 33.333 14.17 0.00 41.28 2.24
2217 2386 5.181690 ACATGCGTGAACATTTTGTTAGT 57.818 34.783 14.17 0.00 41.28 2.24
2218 2387 5.115472 GTGACATGCGTGAACATTTTGTTAG 59.885 40.000 14.17 0.00 41.28 2.34
2219 2388 4.973051 GTGACATGCGTGAACATTTTGTTA 59.027 37.500 14.17 0.00 41.28 2.41
2220 2389 3.796178 GTGACATGCGTGAACATTTTGTT 59.204 39.130 14.17 0.00 44.37 2.83
2221 2390 3.371168 GTGACATGCGTGAACATTTTGT 58.629 40.909 14.17 0.00 0.00 2.83
2222 2391 2.725723 GGTGACATGCGTGAACATTTTG 59.274 45.455 14.17 0.00 0.00 2.44
2223 2392 2.360483 TGGTGACATGCGTGAACATTTT 59.640 40.909 14.17 0.00 33.40 1.82
2224 2393 1.952990 TGGTGACATGCGTGAACATTT 59.047 42.857 14.17 0.00 33.40 2.32
2225 2394 1.603456 TGGTGACATGCGTGAACATT 58.397 45.000 14.17 0.00 33.40 2.71
2226 2395 1.603456 TTGGTGACATGCGTGAACAT 58.397 45.000 14.17 0.00 42.32 2.71
2227 2396 1.064803 GTTTGGTGACATGCGTGAACA 59.935 47.619 14.17 9.53 42.32 3.18
2228 2397 1.064803 TGTTTGGTGACATGCGTGAAC 59.935 47.619 14.17 10.22 42.32 3.18
2229 2398 1.383523 TGTTTGGTGACATGCGTGAA 58.616 45.000 14.17 0.00 42.32 3.18
2230 2399 1.603456 ATGTTTGGTGACATGCGTGA 58.397 45.000 14.17 0.00 42.32 4.35
2231 2400 2.420628 AATGTTTGGTGACATGCGTG 57.579 45.000 3.82 3.82 40.03 5.34
2232 2401 6.449635 AATATAATGTTTGGTGACATGCGT 57.550 33.333 0.00 0.00 40.03 5.24
2233 2402 7.754069 AAAATATAATGTTTGGTGACATGCG 57.246 32.000 0.00 0.00 40.03 4.73
2261 2430 9.787532 CATTGGATTCGTATTTGAACATAGTTT 57.212 29.630 0.00 0.00 0.00 2.66
2262 2431 9.173021 TCATTGGATTCGTATTTGAACATAGTT 57.827 29.630 0.00 0.00 0.00 2.24
2263 2432 8.731275 TCATTGGATTCGTATTTGAACATAGT 57.269 30.769 0.00 0.00 0.00 2.12
2282 2451 9.763465 GCATGTCAAGAAAAATTATTTCATTGG 57.237 29.630 12.51 3.49 0.00 3.16
2294 2463 9.932699 CAAAATGTTAATGCATGTCAAGAAAAA 57.067 25.926 0.00 0.00 0.00 1.94
2295 2464 9.107177 ACAAAATGTTAATGCATGTCAAGAAAA 57.893 25.926 0.00 0.00 0.00 2.29
2296 2465 8.659925 ACAAAATGTTAATGCATGTCAAGAAA 57.340 26.923 0.00 0.00 0.00 2.52
2297 2466 8.659925 AACAAAATGTTAATGCATGTCAAGAA 57.340 26.923 0.00 0.00 39.09 2.52
2298 2467 9.409312 CTAACAAAATGTTAATGCATGTCAAGA 57.591 29.630 0.00 0.00 41.70 3.02
2299 2468 9.195411 ACTAACAAAATGTTAATGCATGTCAAG 57.805 29.630 0.00 0.00 41.70 3.02
2300 2469 9.539825 AACTAACAAAATGTTAATGCATGTCAA 57.460 25.926 0.00 0.00 41.70 3.18
2338 2507 9.430623 CCCCTTTATAGTTTGTACCAAATTTTG 57.569 33.333 1.99 1.99 0.00 2.44
2339 2508 9.382307 TCCCCTTTATAGTTTGTACCAAATTTT 57.618 29.630 0.00 0.00 0.00 1.82
2340 2509 8.809066 GTCCCCTTTATAGTTTGTACCAAATTT 58.191 33.333 0.00 0.00 0.00 1.82
2341 2510 7.398047 GGTCCCCTTTATAGTTTGTACCAAATT 59.602 37.037 0.00 0.00 0.00 1.82
2342 2511 6.893554 GGTCCCCTTTATAGTTTGTACCAAAT 59.106 38.462 0.00 0.00 0.00 2.32
2343 2512 6.045813 AGGTCCCCTTTATAGTTTGTACCAAA 59.954 38.462 0.00 0.00 0.00 3.28
2344 2513 5.552766 AGGTCCCCTTTATAGTTTGTACCAA 59.447 40.000 0.00 0.00 0.00 3.67
2345 2514 5.102967 AGGTCCCCTTTATAGTTTGTACCA 58.897 41.667 0.00 0.00 0.00 3.25
2346 2515 5.705397 AGGTCCCCTTTATAGTTTGTACC 57.295 43.478 0.00 0.00 0.00 3.34
2349 2518 8.277197 GGTTTATAGGTCCCCTTTATAGTTTGT 58.723 37.037 0.00 0.00 34.61 2.83
2350 2519 8.276477 TGGTTTATAGGTCCCCTTTATAGTTTG 58.724 37.037 0.00 0.00 34.61 2.93
2351 2520 8.410000 TGGTTTATAGGTCCCCTTTATAGTTT 57.590 34.615 0.00 0.00 34.61 2.66
2352 2521 7.073343 CCTGGTTTATAGGTCCCCTTTATAGTT 59.927 40.741 0.00 0.00 34.61 2.24
2353 2522 6.561454 CCTGGTTTATAGGTCCCCTTTATAGT 59.439 42.308 0.00 0.00 34.61 2.12
2354 2523 6.790963 TCCTGGTTTATAGGTCCCCTTTATAG 59.209 42.308 0.00 0.00 36.67 1.31
2355 2524 6.559921 GTCCTGGTTTATAGGTCCCCTTTATA 59.440 42.308 0.00 0.00 36.67 0.98
2356 2525 5.371769 GTCCTGGTTTATAGGTCCCCTTTAT 59.628 44.000 0.00 0.00 36.67 1.40
2357 2526 4.723285 GTCCTGGTTTATAGGTCCCCTTTA 59.277 45.833 0.00 0.00 36.67 1.85
2358 2527 3.526430 GTCCTGGTTTATAGGTCCCCTTT 59.474 47.826 0.00 0.00 36.67 3.11
2359 2528 3.120898 GTCCTGGTTTATAGGTCCCCTT 58.879 50.000 0.00 0.00 36.67 3.95
2360 2529 2.772930 GTCCTGGTTTATAGGTCCCCT 58.227 52.381 0.00 0.00 36.67 4.79
2361 2530 1.415289 CGTCCTGGTTTATAGGTCCCC 59.585 57.143 0.00 0.00 36.67 4.81
2362 2531 1.415289 CCGTCCTGGTTTATAGGTCCC 59.585 57.143 0.00 0.00 36.67 4.46
2363 2532 2.391678 TCCGTCCTGGTTTATAGGTCC 58.608 52.381 0.00 0.00 39.52 4.46
2364 2533 3.450096 ACTTCCGTCCTGGTTTATAGGTC 59.550 47.826 0.00 0.00 39.52 3.85
2365 2534 3.447950 ACTTCCGTCCTGGTTTATAGGT 58.552 45.455 0.00 0.00 39.52 3.08
2366 2535 4.648307 ACTACTTCCGTCCTGGTTTATAGG 59.352 45.833 0.00 0.00 39.52 2.57
2367 2536 5.848833 ACTACTTCCGTCCTGGTTTATAG 57.151 43.478 0.00 0.00 39.52 1.31
2368 2537 6.891908 ACTTACTACTTCCGTCCTGGTTTATA 59.108 38.462 0.00 0.00 39.52 0.98
2369 2538 5.718607 ACTTACTACTTCCGTCCTGGTTTAT 59.281 40.000 0.00 0.00 39.52 1.40
2370 2539 5.079643 ACTTACTACTTCCGTCCTGGTTTA 58.920 41.667 0.00 0.00 39.52 2.01
2371 2540 3.899980 ACTTACTACTTCCGTCCTGGTTT 59.100 43.478 0.00 0.00 39.52 3.27
2372 2541 3.504375 ACTTACTACTTCCGTCCTGGTT 58.496 45.455 0.00 0.00 39.52 3.67
2373 2542 3.166560 ACTTACTACTTCCGTCCTGGT 57.833 47.619 0.00 0.00 39.52 4.00
2374 2543 4.460382 TGTAACTTACTACTTCCGTCCTGG 59.540 45.833 0.71 0.00 40.09 4.45
2375 2544 5.413833 TCTGTAACTTACTACTTCCGTCCTG 59.586 44.000 0.71 0.00 0.00 3.86
2376 2545 5.414144 GTCTGTAACTTACTACTTCCGTCCT 59.586 44.000 0.71 0.00 0.00 3.85
2377 2546 5.392487 GGTCTGTAACTTACTACTTCCGTCC 60.392 48.000 0.71 0.00 0.00 4.79
2378 2547 5.182001 TGGTCTGTAACTTACTACTTCCGTC 59.818 44.000 0.71 0.00 0.00 4.79
2379 2548 5.072741 TGGTCTGTAACTTACTACTTCCGT 58.927 41.667 0.71 0.00 0.00 4.69
2380 2549 5.413833 TCTGGTCTGTAACTTACTACTTCCG 59.586 44.000 0.71 0.00 0.00 4.30
2381 2550 6.127675 CCTCTGGTCTGTAACTTACTACTTCC 60.128 46.154 0.71 0.00 0.00 3.46
2382 2551 6.127675 CCCTCTGGTCTGTAACTTACTACTTC 60.128 46.154 0.71 0.00 0.00 3.01
2383 2552 5.715753 CCCTCTGGTCTGTAACTTACTACTT 59.284 44.000 0.71 0.00 0.00 2.24
2384 2553 5.014966 TCCCTCTGGTCTGTAACTTACTACT 59.985 44.000 0.71 0.00 0.00 2.57
2385 2554 5.259632 TCCCTCTGGTCTGTAACTTACTAC 58.740 45.833 0.71 0.00 0.00 2.73
2386 2555 5.525454 TCCCTCTGGTCTGTAACTTACTA 57.475 43.478 0.71 0.00 0.00 1.82
2387 2556 4.399483 TCCCTCTGGTCTGTAACTTACT 57.601 45.455 0.71 0.00 0.00 2.24
2388 2557 5.236282 GTTTCCCTCTGGTCTGTAACTTAC 58.764 45.833 0.00 0.00 0.00 2.34
2389 2558 4.285260 GGTTTCCCTCTGGTCTGTAACTTA 59.715 45.833 0.00 0.00 0.00 2.24
2390 2559 3.072622 GGTTTCCCTCTGGTCTGTAACTT 59.927 47.826 0.00 0.00 0.00 2.66
2391 2560 2.638363 GGTTTCCCTCTGGTCTGTAACT 59.362 50.000 0.00 0.00 0.00 2.24
2392 2561 2.638363 AGGTTTCCCTCTGGTCTGTAAC 59.362 50.000 0.00 0.00 35.62 2.50
2393 2562 2.986050 AGGTTTCCCTCTGGTCTGTAA 58.014 47.619 0.00 0.00 35.62 2.41
2394 2563 2.715763 AGGTTTCCCTCTGGTCTGTA 57.284 50.000 0.00 0.00 35.62 2.74
2395 2564 2.715763 TAGGTTTCCCTCTGGTCTGT 57.284 50.000 0.00 0.00 41.45 3.41
2396 2565 2.171448 CCATAGGTTTCCCTCTGGTCTG 59.829 54.545 5.28 0.00 45.70 3.51
2397 2566 2.482494 CCATAGGTTTCCCTCTGGTCT 58.518 52.381 5.28 0.00 45.70 3.85
2401 2570 0.183731 GGGCCATAGGTTTCCCTCTG 59.816 60.000 4.39 0.00 41.45 3.35
2402 2571 0.253630 TGGGCCATAGGTTTCCCTCT 60.254 55.000 0.00 0.00 41.45 3.69
2403 2572 0.183731 CTGGGCCATAGGTTTCCCTC 59.816 60.000 6.72 0.00 41.45 4.30
2404 2573 0.552615 ACTGGGCCATAGGTTTCCCT 60.553 55.000 6.72 0.00 45.51 4.20
2405 2574 0.395724 CACTGGGCCATAGGTTTCCC 60.396 60.000 6.72 0.00 39.22 3.97
2406 2575 0.623723 TCACTGGGCCATAGGTTTCC 59.376 55.000 6.72 0.00 0.00 3.13
2407 2576 2.736670 ATCACTGGGCCATAGGTTTC 57.263 50.000 6.72 0.00 0.00 2.78
2408 2577 3.117888 CAGTATCACTGGGCCATAGGTTT 60.118 47.826 6.72 0.00 42.35 3.27
2409 2578 2.439507 CAGTATCACTGGGCCATAGGTT 59.560 50.000 6.72 0.00 42.35 3.50
2410 2579 2.050144 CAGTATCACTGGGCCATAGGT 58.950 52.381 6.72 0.00 42.35 3.08
2411 2580 1.271054 GCAGTATCACTGGGCCATAGG 60.271 57.143 6.72 0.00 46.01 2.57
2412 2581 1.271054 GGCAGTATCACTGGGCCATAG 60.271 57.143 6.72 4.64 46.01 2.23
2413 2582 0.764890 GGCAGTATCACTGGGCCATA 59.235 55.000 6.72 0.00 46.01 2.74
2414 2583 0.990282 AGGCAGTATCACTGGGCCAT 60.990 55.000 6.72 0.00 46.01 4.40
2415 2584 1.616327 AGGCAGTATCACTGGGCCA 60.616 57.895 5.85 5.85 46.01 5.36
2416 2585 1.153086 CAGGCAGTATCACTGGGCC 60.153 63.158 8.31 0.00 46.01 5.80
2417 2586 0.830648 TACAGGCAGTATCACTGGGC 59.169 55.000 8.31 2.23 46.01 5.36
2434 2603 6.603201 TGGAAATGGTCAGAGAAAATGGATAC 59.397 38.462 0.00 0.00 0.00 2.24
2435 2604 6.730447 TGGAAATGGTCAGAGAAAATGGATA 58.270 36.000 0.00 0.00 0.00 2.59
2436 2605 5.582953 TGGAAATGGTCAGAGAAAATGGAT 58.417 37.500 0.00 0.00 0.00 3.41
2437 2606 4.996793 TGGAAATGGTCAGAGAAAATGGA 58.003 39.130 0.00 0.00 0.00 3.41
2438 2607 5.657474 CATGGAAATGGTCAGAGAAAATGG 58.343 41.667 0.00 0.00 0.00 3.16
2439 2608 5.107133 GCATGGAAATGGTCAGAGAAAATG 58.893 41.667 0.00 0.00 0.00 2.32
2440 2609 4.161001 GGCATGGAAATGGTCAGAGAAAAT 59.839 41.667 0.00 0.00 0.00 1.82
2441 2610 3.511146 GGCATGGAAATGGTCAGAGAAAA 59.489 43.478 0.00 0.00 0.00 2.29
2442 2611 3.091545 GGCATGGAAATGGTCAGAGAAA 58.908 45.455 0.00 0.00 0.00 2.52
2443 2612 2.726821 GGCATGGAAATGGTCAGAGAA 58.273 47.619 0.00 0.00 0.00 2.87
2444 2613 1.407299 CGGCATGGAAATGGTCAGAGA 60.407 52.381 0.00 0.00 0.00 3.10
2445 2614 1.019673 CGGCATGGAAATGGTCAGAG 58.980 55.000 0.00 0.00 0.00 3.35
2446 2615 0.327924 ACGGCATGGAAATGGTCAGA 59.672 50.000 0.00 0.00 0.00 3.27
2447 2616 0.452987 CACGGCATGGAAATGGTCAG 59.547 55.000 0.00 0.00 0.00 3.51
2448 2617 0.037447 TCACGGCATGGAAATGGTCA 59.963 50.000 0.00 0.00 0.00 4.02
2449 2618 0.734889 CTCACGGCATGGAAATGGTC 59.265 55.000 0.00 0.00 0.00 4.02
2450 2619 0.327924 TCTCACGGCATGGAAATGGT 59.672 50.000 0.00 0.00 0.00 3.55
2451 2620 1.683943 ATCTCACGGCATGGAAATGG 58.316 50.000 0.00 0.00 0.00 3.16
2452 2621 5.391310 GCTATTATCTCACGGCATGGAAATG 60.391 44.000 0.00 0.00 0.00 2.32
2453 2622 4.697352 GCTATTATCTCACGGCATGGAAAT 59.303 41.667 0.00 0.00 0.00 2.17
2454 2623 4.065088 GCTATTATCTCACGGCATGGAAA 58.935 43.478 0.00 0.00 0.00 3.13
2455 2624 3.324846 AGCTATTATCTCACGGCATGGAA 59.675 43.478 0.00 0.00 0.00 3.53
2456 2625 2.899900 AGCTATTATCTCACGGCATGGA 59.100 45.455 0.00 0.00 0.00 3.41
2457 2626 3.325293 AGCTATTATCTCACGGCATGG 57.675 47.619 0.00 0.00 0.00 3.66
2458 2627 5.574830 GTCTTAGCTATTATCTCACGGCATG 59.425 44.000 0.00 0.00 0.00 4.06
2459 2628 5.243954 TGTCTTAGCTATTATCTCACGGCAT 59.756 40.000 0.00 0.00 0.00 4.40
2460 2629 4.583073 TGTCTTAGCTATTATCTCACGGCA 59.417 41.667 0.00 0.00 0.00 5.69
2461 2630 5.122512 TGTCTTAGCTATTATCTCACGGC 57.877 43.478 0.00 0.00 0.00 5.68
2462 2631 5.336055 CCCTGTCTTAGCTATTATCTCACGG 60.336 48.000 0.00 0.00 0.00 4.94
2463 2632 5.704888 CCCTGTCTTAGCTATTATCTCACG 58.295 45.833 0.00 0.00 0.00 4.35
2464 2633 5.011125 TGCCCTGTCTTAGCTATTATCTCAC 59.989 44.000 0.00 0.00 0.00 3.51
2465 2634 5.147767 TGCCCTGTCTTAGCTATTATCTCA 58.852 41.667 0.00 0.00 0.00 3.27
2466 2635 5.730296 TGCCCTGTCTTAGCTATTATCTC 57.270 43.478 0.00 0.00 0.00 2.75


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.