Multiple sequence alignment - TraesCS5A01G535000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G535000 chr5A 100.000 3914 0 0 1 3914 691837020 691833107 0.000000e+00 7228.0
1 TraesCS5A01G535000 chr4D 92.531 3441 142 43 538 3914 507271335 507274724 0.000000e+00 4824.0
2 TraesCS5A01G535000 chr4D 91.354 347 20 8 1106 1451 475746401 475746738 2.130000e-127 466.0
3 TraesCS5A01G535000 chr4D 87.410 278 22 6 49 317 507269898 507269625 1.370000e-79 307.0
4 TraesCS5A01G535000 chr4D 83.333 84 6 3 438 520 507270128 507270204 1.950000e-08 71.3
5 TraesCS5A01G535000 chr4B 91.448 2748 108 58 538 3201 654276201 654273497 0.000000e+00 3655.0
6 TraesCS5A01G535000 chr4B 86.381 514 47 11 3407 3914 654273477 654272981 1.240000e-149 540.0
7 TraesCS5A01G535000 chr1A 82.007 1156 174 27 1770 2914 372069076 372067944 0.000000e+00 952.0
8 TraesCS5A01G535000 chr1A 100.000 38 0 0 3226 3263 455037397 455037434 1.950000e-08 71.3
9 TraesCS5A01G535000 chr1B 81.504 1157 178 29 1770 2914 401454252 401453120 0.000000e+00 918.0
10 TraesCS5A01G535000 chr1D 81.072 1157 183 29 1770 2914 298446104 298444972 0.000000e+00 891.0
11 TraesCS5A01G535000 chr1D 87.179 624 29 22 870 1451 27850241 27849627 0.000000e+00 662.0
12 TraesCS5A01G535000 chr1D 92.507 347 16 4 1106 1451 453605990 453605653 4.550000e-134 488.0
13 TraesCS5A01G535000 chr1D 100.000 37 0 0 3227 3263 355180540 355180576 7.020000e-08 69.4
14 TraesCS5A01G535000 chr1D 95.238 42 2 0 3223 3264 251793822 251793863 2.520000e-07 67.6
15 TraesCS5A01G535000 chr5D 89.850 601 33 16 870 1451 525305294 525304703 0.000000e+00 747.0
16 TraesCS5A01G535000 chr5D 89.130 46 5 0 3232 3277 322977187 322977232 1.520000e-04 58.4
17 TraesCS5A01G535000 chr3D 89.379 612 25 17 870 1451 231894511 231895112 0.000000e+00 734.0
18 TraesCS5A01G535000 chr3B 79.852 541 48 35 863 1399 815308135 815307652 4.840000e-89 339.0
19 TraesCS5A01G535000 chr3B 87.678 211 19 7 2134 2342 672702696 672702491 5.050000e-59 239.0
20 TraesCS5A01G535000 chr3B 87.204 211 20 7 2134 2342 705305485 705305280 2.350000e-57 233.0
21 TraesCS5A01G535000 chr2D 84.871 271 20 8 2109 2370 646605456 646605198 1.810000e-63 254.0
22 TraesCS5A01G535000 chr6B 86.916 214 21 7 2131 2342 624024221 624024429 2.350000e-57 233.0
23 TraesCS5A01G535000 chr7D 95.455 132 6 0 1320 1451 634159049 634159180 1.100000e-50 211.0
24 TraesCS5A01G535000 chr7D 95.652 46 2 0 3223 3268 458012328 458012373 1.510000e-09 75.0
25 TraesCS5A01G535000 chr2A 77.904 353 30 25 1352 1684 62320447 62320771 4.020000e-40 176.0
26 TraesCS5A01G535000 chr7B 82.941 170 19 7 1522 1683 449878537 449878370 1.130000e-30 145.0
27 TraesCS5A01G535000 chr6A 97.368 38 1 0 3225 3262 409429967 409430004 9.080000e-07 65.8
28 TraesCS5A01G535000 chr7A 100.000 34 0 0 3222 3255 668255449 668255482 3.260000e-06 63.9
29 TraesCS5A01G535000 chr7A 97.297 37 1 0 3228 3264 668255486 668255522 3.260000e-06 63.9
30 TraesCS5A01G535000 chr6D 95.000 40 2 0 3228 3267 305174963 305174924 3.260000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G535000 chr5A 691833107 691837020 3913 True 7228.00 7228 100.0000 1 3914 1 chr5A.!!$R1 3913
1 TraesCS5A01G535000 chr4D 507270128 507274724 4596 False 2447.65 4824 87.9320 438 3914 2 chr4D.!!$F2 3476
2 TraesCS5A01G535000 chr4B 654272981 654276201 3220 True 2097.50 3655 88.9145 538 3914 2 chr4B.!!$R1 3376
3 TraesCS5A01G535000 chr1A 372067944 372069076 1132 True 952.00 952 82.0070 1770 2914 1 chr1A.!!$R1 1144
4 TraesCS5A01G535000 chr1B 401453120 401454252 1132 True 918.00 918 81.5040 1770 2914 1 chr1B.!!$R1 1144
5 TraesCS5A01G535000 chr1D 298444972 298446104 1132 True 891.00 891 81.0720 1770 2914 1 chr1D.!!$R2 1144
6 TraesCS5A01G535000 chr1D 27849627 27850241 614 True 662.00 662 87.1790 870 1451 1 chr1D.!!$R1 581
7 TraesCS5A01G535000 chr5D 525304703 525305294 591 True 747.00 747 89.8500 870 1451 1 chr5D.!!$R1 581
8 TraesCS5A01G535000 chr3D 231894511 231895112 601 False 734.00 734 89.3790 870 1451 1 chr3D.!!$F1 581

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
182 183 0.036671 ACGTTGTCCCGATTTCTCCC 60.037 55.0 0.0 0.0 0.00 4.30 F
655 1781 0.109597 CTGCCTGCTTTGCTTAACGG 60.110 55.0 0.0 0.0 0.00 4.44 F
2379 3621 0.031585 TGTTCAACCTCGACTCCGTG 59.968 55.0 0.0 0.0 37.05 4.94 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1356 2577 2.124403 GGGTGAGGCTCCTGCATG 60.124 66.667 12.86 0.00 41.91 4.06 R
2493 3735 3.056313 GATGACAAGCTTGGCGCCC 62.056 63.158 29.18 15.82 39.74 6.13 R
3378 4636 1.069906 ACGCAAGCATTTCGAGAACAC 60.070 47.619 0.00 0.00 45.62 3.32 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 3.816994 ACCTACAGAAACAACTCCAACC 58.183 45.455 0.00 0.00 0.00 3.77
24 25 3.201266 ACCTACAGAAACAACTCCAACCA 59.799 43.478 0.00 0.00 0.00 3.67
25 26 4.204012 CCTACAGAAACAACTCCAACCAA 58.796 43.478 0.00 0.00 0.00 3.67
26 27 4.642885 CCTACAGAAACAACTCCAACCAAA 59.357 41.667 0.00 0.00 0.00 3.28
27 28 4.718940 ACAGAAACAACTCCAACCAAAG 57.281 40.909 0.00 0.00 0.00 2.77
28 29 4.086457 ACAGAAACAACTCCAACCAAAGT 58.914 39.130 0.00 0.00 0.00 2.66
29 30 4.082245 ACAGAAACAACTCCAACCAAAGTG 60.082 41.667 0.00 0.00 0.00 3.16
30 31 2.959507 AACAACTCCAACCAAAGTGC 57.040 45.000 0.00 0.00 0.00 4.40
31 32 0.738389 ACAACTCCAACCAAAGTGCG 59.262 50.000 0.00 0.00 0.00 5.34
32 33 1.021202 CAACTCCAACCAAAGTGCGA 58.979 50.000 0.00 0.00 0.00 5.10
33 34 1.608590 CAACTCCAACCAAAGTGCGAT 59.391 47.619 0.00 0.00 0.00 4.58
34 35 1.238439 ACTCCAACCAAAGTGCGATG 58.762 50.000 0.00 0.00 0.00 3.84
35 36 0.523072 CTCCAACCAAAGTGCGATGG 59.477 55.000 0.00 0.00 42.60 3.51
36 37 0.893270 TCCAACCAAAGTGCGATGGG 60.893 55.000 0.00 0.00 41.17 4.00
37 38 1.080569 CAACCAAAGTGCGATGGGC 60.081 57.895 0.00 0.00 41.17 5.36
38 39 1.228552 AACCAAAGTGCGATGGGCT 60.229 52.632 0.00 0.00 44.05 5.19
39 40 0.037590 AACCAAAGTGCGATGGGCTA 59.962 50.000 0.00 0.00 44.05 3.93
40 41 0.392998 ACCAAAGTGCGATGGGCTAG 60.393 55.000 0.00 0.00 44.05 3.42
41 42 1.718757 CCAAAGTGCGATGGGCTAGC 61.719 60.000 6.04 6.04 44.05 3.42
42 43 1.026182 CAAAGTGCGATGGGCTAGCA 61.026 55.000 18.24 0.00 44.05 3.49
43 44 0.322456 AAAGTGCGATGGGCTAGCAA 60.322 50.000 18.24 4.19 42.93 3.91
44 45 0.745845 AAGTGCGATGGGCTAGCAAG 60.746 55.000 18.24 3.49 42.93 4.01
45 46 1.450312 GTGCGATGGGCTAGCAAGT 60.450 57.895 18.24 0.26 42.93 3.16
46 47 1.450134 TGCGATGGGCTAGCAAGTG 60.450 57.895 18.24 2.93 44.05 3.16
47 48 1.153369 GCGATGGGCTAGCAAGTGA 60.153 57.895 18.24 0.00 39.11 3.41
48 49 1.156645 GCGATGGGCTAGCAAGTGAG 61.157 60.000 18.24 4.07 39.11 3.51
49 50 0.461548 CGATGGGCTAGCAAGTGAGA 59.538 55.000 18.24 0.00 0.00 3.27
50 51 1.537776 CGATGGGCTAGCAAGTGAGAG 60.538 57.143 18.24 0.00 0.00 3.20
51 52 1.484240 GATGGGCTAGCAAGTGAGAGT 59.516 52.381 18.24 0.00 0.00 3.24
52 53 2.231716 TGGGCTAGCAAGTGAGAGTA 57.768 50.000 18.24 0.00 0.00 2.59
53 54 2.103373 TGGGCTAGCAAGTGAGAGTAG 58.897 52.381 18.24 0.00 0.00 2.57
54 55 1.410882 GGGCTAGCAAGTGAGAGTAGG 59.589 57.143 18.24 0.00 0.00 3.18
55 56 2.104170 GGCTAGCAAGTGAGAGTAGGT 58.896 52.381 18.24 0.00 0.00 3.08
56 57 3.288964 GGCTAGCAAGTGAGAGTAGGTA 58.711 50.000 18.24 0.00 0.00 3.08
57 58 3.316868 GGCTAGCAAGTGAGAGTAGGTAG 59.683 52.174 18.24 0.00 34.41 3.18
58 59 3.316868 GCTAGCAAGTGAGAGTAGGTAGG 59.683 52.174 10.63 0.00 32.54 3.18
59 60 3.459710 AGCAAGTGAGAGTAGGTAGGT 57.540 47.619 0.00 0.00 0.00 3.08
60 61 4.587976 AGCAAGTGAGAGTAGGTAGGTA 57.412 45.455 0.00 0.00 0.00 3.08
61 62 5.132043 AGCAAGTGAGAGTAGGTAGGTAT 57.868 43.478 0.00 0.00 0.00 2.73
62 63 4.890581 AGCAAGTGAGAGTAGGTAGGTATG 59.109 45.833 0.00 0.00 0.00 2.39
63 64 4.645588 GCAAGTGAGAGTAGGTAGGTATGT 59.354 45.833 0.00 0.00 0.00 2.29
64 65 5.826737 GCAAGTGAGAGTAGGTAGGTATGTA 59.173 44.000 0.00 0.00 0.00 2.29
65 66 6.238703 GCAAGTGAGAGTAGGTAGGTATGTAC 60.239 46.154 0.00 0.00 0.00 2.90
66 67 6.828307 AGTGAGAGTAGGTAGGTATGTACT 57.172 41.667 0.00 0.00 0.00 2.73
67 68 7.210618 AGTGAGAGTAGGTAGGTATGTACTT 57.789 40.000 0.00 0.00 0.00 2.24
68 69 7.055378 AGTGAGAGTAGGTAGGTATGTACTTG 58.945 42.308 0.00 0.00 0.00 3.16
69 70 6.262720 GTGAGAGTAGGTAGGTATGTACTTGG 59.737 46.154 0.00 0.00 0.00 3.61
70 71 6.159222 TGAGAGTAGGTAGGTATGTACTTGGA 59.841 42.308 0.00 0.00 0.00 3.53
71 72 6.603224 AGAGTAGGTAGGTATGTACTTGGAG 58.397 44.000 0.00 0.00 0.00 3.86
72 73 5.703310 AGTAGGTAGGTATGTACTTGGAGG 58.297 45.833 0.00 0.00 0.00 4.30
73 74 4.621797 AGGTAGGTATGTACTTGGAGGT 57.378 45.455 0.00 0.00 0.00 3.85
74 75 4.287552 AGGTAGGTATGTACTTGGAGGTG 58.712 47.826 0.00 0.00 0.00 4.00
75 76 3.181468 GGTAGGTATGTACTTGGAGGTGC 60.181 52.174 0.00 0.00 0.00 5.01
76 77 1.480954 AGGTATGTACTTGGAGGTGCG 59.519 52.381 0.00 0.00 0.00 5.34
77 78 1.472728 GGTATGTACTTGGAGGTGCGG 60.473 57.143 0.00 0.00 0.00 5.69
78 79 1.206371 GTATGTACTTGGAGGTGCGGT 59.794 52.381 0.00 0.00 0.00 5.68
79 80 0.249398 ATGTACTTGGAGGTGCGGTC 59.751 55.000 0.00 0.00 0.00 4.79
80 81 1.079336 GTACTTGGAGGTGCGGTCC 60.079 63.158 0.00 0.00 34.31 4.46
81 82 1.534476 TACTTGGAGGTGCGGTCCA 60.534 57.895 0.00 0.00 42.62 4.02
82 83 1.541310 TACTTGGAGGTGCGGTCCAG 61.541 60.000 2.15 0.93 45.00 3.86
83 84 2.847234 TTGGAGGTGCGGTCCAGT 60.847 61.111 2.15 0.00 45.00 4.00
84 85 2.788191 CTTGGAGGTGCGGTCCAGTC 62.788 65.000 2.15 0.00 45.00 3.51
85 86 4.436998 GGAGGTGCGGTCCAGTCG 62.437 72.222 0.00 0.00 33.84 4.18
117 118 6.539324 CAATGATGCAACATTTCATTTCACC 58.461 36.000 18.53 0.00 37.86 4.02
118 119 4.236147 TGATGCAACATTTCATTTCACCG 58.764 39.130 0.00 0.00 0.00 4.94
119 120 3.023946 TGCAACATTTCATTTCACCGG 57.976 42.857 0.00 0.00 0.00 5.28
120 121 1.726248 GCAACATTTCATTTCACCGGC 59.274 47.619 0.00 0.00 0.00 6.13
121 122 2.336667 CAACATTTCATTTCACCGGCC 58.663 47.619 0.00 0.00 0.00 6.13
122 123 0.525761 ACATTTCATTTCACCGGCCG 59.474 50.000 21.04 21.04 0.00 6.13
123 124 0.525761 CATTTCATTTCACCGGCCGT 59.474 50.000 26.12 9.63 0.00 5.68
124 125 1.067915 CATTTCATTTCACCGGCCGTT 60.068 47.619 26.12 6.99 0.00 4.44
125 126 1.033574 TTTCATTTCACCGGCCGTTT 58.966 45.000 26.12 7.69 0.00 3.60
126 127 1.893544 TTCATTTCACCGGCCGTTTA 58.106 45.000 26.12 5.29 0.00 2.01
127 128 1.158434 TCATTTCACCGGCCGTTTAC 58.842 50.000 26.12 0.00 0.00 2.01
128 129 0.875728 CATTTCACCGGCCGTTTACA 59.124 50.000 26.12 5.08 0.00 2.41
129 130 1.267261 CATTTCACCGGCCGTTTACAA 59.733 47.619 26.12 10.38 0.00 2.41
130 131 1.386533 TTTCACCGGCCGTTTACAAA 58.613 45.000 26.12 12.18 0.00 2.83
131 132 1.386533 TTCACCGGCCGTTTACAAAA 58.613 45.000 26.12 5.34 0.00 2.44
132 133 0.945813 TCACCGGCCGTTTACAAAAG 59.054 50.000 26.12 7.62 0.00 2.27
133 134 0.664224 CACCGGCCGTTTACAAAAGT 59.336 50.000 26.12 8.36 0.00 2.66
134 135 0.664224 ACCGGCCGTTTACAAAAGTG 59.336 50.000 26.12 6.21 0.00 3.16
135 136 0.039888 CCGGCCGTTTACAAAAGTGG 60.040 55.000 26.12 0.00 0.00 4.00
136 137 0.662077 CGGCCGTTTACAAAAGTGGC 60.662 55.000 19.50 6.92 41.72 5.01
137 138 3.188773 GCCGTTTACAAAAGTGGCC 57.811 52.632 0.00 0.00 36.51 5.36
138 139 0.386113 GCCGTTTACAAAAGTGGCCA 59.614 50.000 0.00 0.00 36.51 5.36
139 140 1.866471 GCCGTTTACAAAAGTGGCCAC 60.866 52.381 29.22 29.22 36.51 5.01
140 141 1.269361 CCGTTTACAAAAGTGGCCACC 60.269 52.381 32.29 14.56 0.00 4.61
141 142 1.598430 CGTTTACAAAAGTGGCCACCG 60.598 52.381 32.29 20.24 0.00 4.94
142 143 1.033574 TTTACAAAAGTGGCCACCGG 58.966 50.000 32.29 20.35 0.00 5.28
143 144 0.183014 TTACAAAAGTGGCCACCGGA 59.817 50.000 32.29 12.63 0.00 5.14
144 145 0.183014 TACAAAAGTGGCCACCGGAA 59.817 50.000 32.29 10.60 0.00 4.30
145 146 1.106944 ACAAAAGTGGCCACCGGAAG 61.107 55.000 32.29 19.94 0.00 3.46
146 147 0.821711 CAAAAGTGGCCACCGGAAGA 60.822 55.000 32.29 0.00 0.00 2.87
147 148 0.112412 AAAAGTGGCCACCGGAAGAT 59.888 50.000 32.29 9.20 0.00 2.40
148 149 0.112412 AAAGTGGCCACCGGAAGATT 59.888 50.000 32.29 15.22 0.00 2.40
149 150 0.112412 AAGTGGCCACCGGAAGATTT 59.888 50.000 32.29 14.44 0.00 2.17
150 151 0.609131 AGTGGCCACCGGAAGATTTG 60.609 55.000 32.29 0.00 0.00 2.32
151 152 1.976474 TGGCCACCGGAAGATTTGC 60.976 57.895 9.46 0.00 0.00 3.68
152 153 1.678970 GGCCACCGGAAGATTTGCT 60.679 57.895 9.46 0.00 0.00 3.91
153 154 0.393808 GGCCACCGGAAGATTTGCTA 60.394 55.000 9.46 0.00 0.00 3.49
154 155 0.733150 GCCACCGGAAGATTTGCTAC 59.267 55.000 9.46 0.00 0.00 3.58
155 156 1.006832 CCACCGGAAGATTTGCTACG 58.993 55.000 9.46 0.00 0.00 3.51
156 157 0.373716 CACCGGAAGATTTGCTACGC 59.626 55.000 9.46 0.00 0.00 4.42
157 158 0.743345 ACCGGAAGATTTGCTACGCC 60.743 55.000 9.46 0.00 0.00 5.68
158 159 1.636340 CGGAAGATTTGCTACGCCG 59.364 57.895 0.00 0.00 32.30 6.46
159 160 1.082117 CGGAAGATTTGCTACGCCGT 61.082 55.000 0.00 0.00 33.73 5.68
160 161 1.799917 CGGAAGATTTGCTACGCCGTA 60.800 52.381 0.00 0.00 33.73 4.02
161 162 1.591619 GGAAGATTTGCTACGCCGTAC 59.408 52.381 0.00 0.00 0.00 3.67
172 173 2.806621 GCCGTACGACGTTGTCCC 60.807 66.667 18.76 3.55 40.58 4.46
173 174 2.502510 CCGTACGACGTTGTCCCG 60.503 66.667 18.76 15.37 40.58 5.14
174 175 2.555782 CGTACGACGTTGTCCCGA 59.444 61.111 12.83 0.00 36.74 5.14
175 176 1.135315 CGTACGACGTTGTCCCGAT 59.865 57.895 12.83 0.00 36.74 4.18
176 177 0.454957 CGTACGACGTTGTCCCGATT 60.455 55.000 12.83 0.00 36.74 3.34
177 178 1.701704 GTACGACGTTGTCCCGATTT 58.298 50.000 12.83 0.00 0.00 2.17
178 179 1.650645 GTACGACGTTGTCCCGATTTC 59.349 52.381 12.83 0.00 0.00 2.17
179 180 0.316204 ACGACGTTGTCCCGATTTCT 59.684 50.000 1.48 0.00 0.00 2.52
180 181 0.989890 CGACGTTGTCCCGATTTCTC 59.010 55.000 0.00 0.00 0.00 2.87
181 182 1.356938 GACGTTGTCCCGATTTCTCC 58.643 55.000 0.00 0.00 0.00 3.71
182 183 0.036671 ACGTTGTCCCGATTTCTCCC 60.037 55.000 0.00 0.00 0.00 4.30
183 184 1.082117 CGTTGTCCCGATTTCTCCCG 61.082 60.000 0.00 0.00 0.00 5.14
184 185 0.743345 GTTGTCCCGATTTCTCCCGG 60.743 60.000 0.00 0.00 44.94 5.73
185 186 1.196104 TTGTCCCGATTTCTCCCGGT 61.196 55.000 0.00 0.00 43.93 5.28
186 187 1.196104 TGTCCCGATTTCTCCCGGTT 61.196 55.000 0.00 0.00 43.93 4.44
187 188 0.826062 GTCCCGATTTCTCCCGGTTA 59.174 55.000 0.00 0.00 43.93 2.85
188 189 1.415289 GTCCCGATTTCTCCCGGTTAT 59.585 52.381 0.00 0.00 43.93 1.89
189 190 2.121129 TCCCGATTTCTCCCGGTTATT 58.879 47.619 0.00 0.00 43.93 1.40
190 191 2.506644 TCCCGATTTCTCCCGGTTATTT 59.493 45.455 0.00 0.00 43.93 1.40
191 192 3.054213 TCCCGATTTCTCCCGGTTATTTT 60.054 43.478 0.00 0.00 43.93 1.82
192 193 3.066203 CCCGATTTCTCCCGGTTATTTTG 59.934 47.826 0.00 0.00 43.93 2.44
193 194 3.942748 CCGATTTCTCCCGGTTATTTTGA 59.057 43.478 0.00 0.00 40.78 2.69
194 195 4.201881 CCGATTTCTCCCGGTTATTTTGAC 60.202 45.833 0.00 0.00 40.78 3.18
195 196 4.393680 CGATTTCTCCCGGTTATTTTGACA 59.606 41.667 0.00 0.00 0.00 3.58
196 197 5.447279 CGATTTCTCCCGGTTATTTTGACAG 60.447 44.000 0.00 0.00 0.00 3.51
197 198 3.343941 TCTCCCGGTTATTTTGACAGG 57.656 47.619 0.00 0.00 32.94 4.00
198 199 2.907696 TCTCCCGGTTATTTTGACAGGA 59.092 45.455 0.00 0.00 34.77 3.86
199 200 3.328343 TCTCCCGGTTATTTTGACAGGAA 59.672 43.478 0.00 0.00 34.77 3.36
200 201 4.076394 CTCCCGGTTATTTTGACAGGAAA 58.924 43.478 0.00 0.00 34.77 3.13
201 202 4.668636 TCCCGGTTATTTTGACAGGAAAT 58.331 39.130 0.00 0.00 34.77 2.17
202 203 5.081032 TCCCGGTTATTTTGACAGGAAATT 58.919 37.500 0.00 0.00 34.77 1.82
203 204 6.246919 TCCCGGTTATTTTGACAGGAAATTA 58.753 36.000 0.00 0.00 34.77 1.40
204 205 6.720288 TCCCGGTTATTTTGACAGGAAATTAA 59.280 34.615 0.00 0.00 34.77 1.40
205 206 7.033185 CCCGGTTATTTTGACAGGAAATTAAG 58.967 38.462 0.00 0.00 34.77 1.85
206 207 7.309560 CCCGGTTATTTTGACAGGAAATTAAGT 60.310 37.037 0.00 0.00 34.77 2.24
207 208 8.732531 CCGGTTATTTTGACAGGAAATTAAGTA 58.267 33.333 0.00 0.00 34.77 2.24
208 209 9.769093 CGGTTATTTTGACAGGAAATTAAGTAG 57.231 33.333 0.00 0.00 0.00 2.57
213 214 8.974060 TTTTGACAGGAAATTAAGTAGACACT 57.026 30.769 0.00 0.00 36.19 3.55
214 215 8.603242 TTTGACAGGAAATTAAGTAGACACTC 57.397 34.615 0.00 0.00 32.29 3.51
215 216 7.297936 TGACAGGAAATTAAGTAGACACTCA 57.702 36.000 0.00 0.00 32.29 3.41
216 217 7.907389 TGACAGGAAATTAAGTAGACACTCAT 58.093 34.615 0.00 0.00 32.29 2.90
217 218 8.375506 TGACAGGAAATTAAGTAGACACTCATT 58.624 33.333 0.00 0.00 32.29 2.57
218 219 9.871238 GACAGGAAATTAAGTAGACACTCATTA 57.129 33.333 0.00 0.00 32.29 1.90
226 227 8.738199 TTAAGTAGACACTCATTAACAAGTCG 57.262 34.615 0.00 0.00 32.29 4.18
227 228 6.328641 AGTAGACACTCATTAACAAGTCGT 57.671 37.500 0.00 0.00 0.00 4.34
228 229 6.746120 AGTAGACACTCATTAACAAGTCGTT 58.254 36.000 0.00 0.00 41.91 3.85
229 230 5.907197 AGACACTCATTAACAAGTCGTTG 57.093 39.130 0.00 0.00 38.63 4.10
230 231 4.750098 AGACACTCATTAACAAGTCGTTGG 59.250 41.667 0.00 0.00 38.63 3.77
231 232 4.448210 ACACTCATTAACAAGTCGTTGGT 58.552 39.130 0.00 0.00 38.63 3.67
232 233 5.603596 ACACTCATTAACAAGTCGTTGGTA 58.396 37.500 0.00 0.00 38.63 3.25
233 234 5.464389 ACACTCATTAACAAGTCGTTGGTAC 59.536 40.000 0.00 0.00 35.48 3.34
234 235 5.694910 CACTCATTAACAAGTCGTTGGTACT 59.305 40.000 0.00 0.00 35.48 2.73
235 236 6.202188 CACTCATTAACAAGTCGTTGGTACTT 59.798 38.462 0.00 0.00 35.48 2.24
236 237 6.764560 ACTCATTAACAAGTCGTTGGTACTTT 59.235 34.615 0.00 0.00 35.48 2.66
237 238 7.281549 ACTCATTAACAAGTCGTTGGTACTTTT 59.718 33.333 0.00 0.00 35.48 2.27
238 239 7.411274 TCATTAACAAGTCGTTGGTACTTTTG 58.589 34.615 0.00 0.00 35.48 2.44
239 240 4.625972 AACAAGTCGTTGGTACTTTTGG 57.374 40.909 0.00 0.00 38.07 3.28
240 241 3.613030 ACAAGTCGTTGGTACTTTTGGT 58.387 40.909 0.00 0.00 38.07 3.67
241 242 4.011698 ACAAGTCGTTGGTACTTTTGGTT 58.988 39.130 0.00 0.00 38.07 3.67
242 243 5.184711 ACAAGTCGTTGGTACTTTTGGTTA 58.815 37.500 0.00 0.00 38.07 2.85
243 244 5.295045 ACAAGTCGTTGGTACTTTTGGTTAG 59.705 40.000 0.00 0.00 38.07 2.34
244 245 3.811497 AGTCGTTGGTACTTTTGGTTAGC 59.189 43.478 0.00 0.00 0.00 3.09
245 246 3.560896 GTCGTTGGTACTTTTGGTTAGCA 59.439 43.478 0.00 0.00 0.00 3.49
246 247 3.560896 TCGTTGGTACTTTTGGTTAGCAC 59.439 43.478 0.00 0.00 0.00 4.40
247 248 3.312973 CGTTGGTACTTTTGGTTAGCACA 59.687 43.478 0.00 0.00 0.00 4.57
248 249 4.603985 GTTGGTACTTTTGGTTAGCACAC 58.396 43.478 0.00 0.00 0.00 3.82
249 250 3.215975 TGGTACTTTTGGTTAGCACACC 58.784 45.455 0.00 0.00 37.34 4.16
250 251 3.215975 GGTACTTTTGGTTAGCACACCA 58.784 45.455 2.91 2.91 45.68 4.17
255 256 3.717842 TGGTTAGCACACCAAGTCC 57.282 52.632 4.57 0.00 44.30 3.85
256 257 1.136828 TGGTTAGCACACCAAGTCCT 58.863 50.000 4.57 0.00 44.30 3.85
257 258 1.493022 TGGTTAGCACACCAAGTCCTT 59.507 47.619 4.57 0.00 44.30 3.36
258 259 2.706723 TGGTTAGCACACCAAGTCCTTA 59.293 45.455 4.57 0.00 44.30 2.69
259 260 3.244422 TGGTTAGCACACCAAGTCCTTAG 60.244 47.826 4.57 0.00 44.30 2.18
260 261 2.742589 GTTAGCACACCAAGTCCTTAGC 59.257 50.000 0.00 0.00 0.00 3.09
261 262 0.764890 AGCACACCAAGTCCTTAGCA 59.235 50.000 0.00 0.00 0.00 3.49
262 263 0.875059 GCACACCAAGTCCTTAGCAC 59.125 55.000 0.00 0.00 0.00 4.40
263 264 1.148310 CACACCAAGTCCTTAGCACG 58.852 55.000 0.00 0.00 0.00 5.34
264 265 0.756903 ACACCAAGTCCTTAGCACGT 59.243 50.000 0.00 0.00 0.00 4.49
265 266 1.965643 ACACCAAGTCCTTAGCACGTA 59.034 47.619 0.00 0.00 0.00 3.57
266 267 2.366266 ACACCAAGTCCTTAGCACGTAA 59.634 45.455 0.00 0.00 0.00 3.18
267 268 3.007614 ACACCAAGTCCTTAGCACGTAAT 59.992 43.478 0.00 0.00 0.00 1.89
268 269 4.221262 ACACCAAGTCCTTAGCACGTAATA 59.779 41.667 0.00 0.00 0.00 0.98
269 270 4.565564 CACCAAGTCCTTAGCACGTAATAC 59.434 45.833 0.00 0.00 0.00 1.89
270 271 4.465305 ACCAAGTCCTTAGCACGTAATACT 59.535 41.667 0.00 0.00 0.00 2.12
271 272 5.653769 ACCAAGTCCTTAGCACGTAATACTA 59.346 40.000 0.00 0.00 0.00 1.82
272 273 6.183360 ACCAAGTCCTTAGCACGTAATACTAG 60.183 42.308 0.00 0.00 0.00 2.57
273 274 5.435820 AGTCCTTAGCACGTAATACTAGC 57.564 43.478 0.00 0.00 0.00 3.42
274 275 5.131784 AGTCCTTAGCACGTAATACTAGCT 58.868 41.667 10.41 10.41 39.22 3.32
275 276 5.008811 AGTCCTTAGCACGTAATACTAGCTG 59.991 44.000 13.99 2.14 36.80 4.24
276 277 4.885907 TCCTTAGCACGTAATACTAGCTGT 59.114 41.667 13.99 0.00 36.80 4.40
277 278 5.359009 TCCTTAGCACGTAATACTAGCTGTT 59.641 40.000 13.99 0.00 36.80 3.16
278 279 5.459107 CCTTAGCACGTAATACTAGCTGTTG 59.541 44.000 13.99 6.35 36.80 3.33
279 280 4.713824 AGCACGTAATACTAGCTGTTGA 57.286 40.909 0.00 0.00 33.67 3.18
280 281 4.421948 AGCACGTAATACTAGCTGTTGAC 58.578 43.478 0.00 0.00 33.67 3.18
281 282 4.158025 AGCACGTAATACTAGCTGTTGACT 59.842 41.667 0.00 0.00 33.67 3.41
282 283 4.863131 GCACGTAATACTAGCTGTTGACTT 59.137 41.667 0.00 0.00 0.00 3.01
283 284 5.220228 GCACGTAATACTAGCTGTTGACTTG 60.220 44.000 0.00 0.00 0.00 3.16
284 285 5.862323 CACGTAATACTAGCTGTTGACTTGT 59.138 40.000 0.00 0.00 0.00 3.16
285 286 6.365247 CACGTAATACTAGCTGTTGACTTGTT 59.635 38.462 0.00 0.00 0.00 2.83
286 287 6.365247 ACGTAATACTAGCTGTTGACTTGTTG 59.635 38.462 0.00 0.00 0.00 3.33
287 288 5.613358 AATACTAGCTGTTGACTTGTTGC 57.387 39.130 0.00 0.00 0.00 4.17
288 289 3.199880 ACTAGCTGTTGACTTGTTGCT 57.800 42.857 0.00 0.00 34.92 3.91
289 290 4.336889 ACTAGCTGTTGACTTGTTGCTA 57.663 40.909 0.00 0.00 32.72 3.49
290 291 4.917887 CTAGCTGTTGACTTGTTGCTAG 57.082 45.455 0.00 0.00 42.21 3.42
291 292 2.498167 AGCTGTTGACTTGTTGCTAGG 58.502 47.619 0.00 0.00 0.00 3.02
292 293 1.537202 GCTGTTGACTTGTTGCTAGGG 59.463 52.381 0.00 0.00 0.00 3.53
293 294 2.810400 GCTGTTGACTTGTTGCTAGGGA 60.810 50.000 0.00 0.00 0.00 4.20
294 295 3.679389 CTGTTGACTTGTTGCTAGGGAT 58.321 45.455 0.00 0.00 0.00 3.85
295 296 3.411446 TGTTGACTTGTTGCTAGGGATG 58.589 45.455 0.00 0.00 0.00 3.51
296 297 2.749621 GTTGACTTGTTGCTAGGGATGG 59.250 50.000 0.00 0.00 0.00 3.51
297 298 1.281867 TGACTTGTTGCTAGGGATGGG 59.718 52.381 0.00 0.00 0.00 4.00
298 299 1.559682 GACTTGTTGCTAGGGATGGGA 59.440 52.381 0.00 0.00 0.00 4.37
299 300 1.992557 ACTTGTTGCTAGGGATGGGAA 59.007 47.619 0.00 0.00 0.00 3.97
300 301 2.378547 ACTTGTTGCTAGGGATGGGAAA 59.621 45.455 0.00 0.00 0.00 3.13
301 302 3.181423 ACTTGTTGCTAGGGATGGGAAAA 60.181 43.478 0.00 0.00 0.00 2.29
302 303 3.534357 TGTTGCTAGGGATGGGAAAAA 57.466 42.857 0.00 0.00 0.00 1.94
322 323 6.519679 AAAAACTAGACGACCAACCTTTTT 57.480 33.333 0.00 0.00 0.00 1.94
342 343 1.803334 TTTCGGAGTTGGAATGGACG 58.197 50.000 0.00 0.00 0.00 4.79
343 344 0.970640 TTCGGAGTTGGAATGGACGA 59.029 50.000 0.00 0.00 0.00 4.20
344 345 0.245539 TCGGAGTTGGAATGGACGAC 59.754 55.000 0.00 0.00 0.00 4.34
345 346 0.739813 CGGAGTTGGAATGGACGACC 60.740 60.000 0.00 0.00 0.00 4.79
365 366 3.634397 CAACTATTGGGCTGAGAAGGA 57.366 47.619 0.00 0.00 0.00 3.36
366 367 4.162040 CAACTATTGGGCTGAGAAGGAT 57.838 45.455 0.00 0.00 0.00 3.24
367 368 4.133078 CAACTATTGGGCTGAGAAGGATC 58.867 47.826 0.00 0.00 0.00 3.36
368 369 2.708325 ACTATTGGGCTGAGAAGGATCC 59.292 50.000 2.48 2.48 0.00 3.36
369 370 0.849417 ATTGGGCTGAGAAGGATCCC 59.151 55.000 8.55 0.00 37.49 3.85
370 371 0.253347 TTGGGCTGAGAAGGATCCCT 60.253 55.000 8.55 0.00 37.83 4.20
371 372 0.984961 TGGGCTGAGAAGGATCCCTG 60.985 60.000 8.55 0.00 37.83 4.45
372 373 1.704007 GGGCTGAGAAGGATCCCTGG 61.704 65.000 8.55 0.00 32.13 4.45
373 374 0.985490 GGCTGAGAAGGATCCCTGGT 60.985 60.000 8.55 0.00 32.13 4.00
374 375 1.692762 GGCTGAGAAGGATCCCTGGTA 60.693 57.143 8.55 0.00 32.13 3.25
375 376 2.119495 GCTGAGAAGGATCCCTGGTAA 58.881 52.381 8.55 0.00 32.13 2.85
376 377 2.505819 GCTGAGAAGGATCCCTGGTAAA 59.494 50.000 8.55 0.00 32.13 2.01
377 378 3.054361 GCTGAGAAGGATCCCTGGTAAAA 60.054 47.826 8.55 0.00 32.13 1.52
378 379 4.567747 GCTGAGAAGGATCCCTGGTAAAAA 60.568 45.833 8.55 0.00 32.13 1.94
399 400 2.152016 AGGTTCGCCTCAAAACTAAGC 58.848 47.619 0.00 0.00 46.86 3.09
400 401 2.152016 GGTTCGCCTCAAAACTAAGCT 58.848 47.619 0.00 0.00 0.00 3.74
401 402 3.007614 AGGTTCGCCTCAAAACTAAGCTA 59.992 43.478 0.00 0.00 46.86 3.32
402 403 3.749609 GGTTCGCCTCAAAACTAAGCTAA 59.250 43.478 0.00 0.00 0.00 3.09
403 404 4.142881 GGTTCGCCTCAAAACTAAGCTAAG 60.143 45.833 0.00 0.00 0.00 2.18
404 405 3.000727 TCGCCTCAAAACTAAGCTAAGC 58.999 45.455 0.00 0.00 0.00 3.09
405 406 3.003480 CGCCTCAAAACTAAGCTAAGCT 58.997 45.455 0.00 0.00 42.56 3.74
406 407 4.081862 TCGCCTCAAAACTAAGCTAAGCTA 60.082 41.667 0.00 0.00 38.25 3.32
407 408 4.630069 CGCCTCAAAACTAAGCTAAGCTAA 59.370 41.667 0.00 0.00 38.25 3.09
408 409 5.220491 CGCCTCAAAACTAAGCTAAGCTAAG 60.220 44.000 0.00 0.00 38.25 2.18
409 410 5.875359 GCCTCAAAACTAAGCTAAGCTAAGA 59.125 40.000 0.00 0.00 38.25 2.10
410 411 6.540551 GCCTCAAAACTAAGCTAAGCTAAGAT 59.459 38.462 0.00 0.00 38.25 2.40
411 412 7.254624 GCCTCAAAACTAAGCTAAGCTAAGATC 60.255 40.741 0.00 0.00 38.25 2.75
412 413 7.984617 CCTCAAAACTAAGCTAAGCTAAGATCT 59.015 37.037 0.00 0.00 38.25 2.75
413 414 9.377312 CTCAAAACTAAGCTAAGCTAAGATCTT 57.623 33.333 13.56 13.56 38.25 2.40
414 415 9.726438 TCAAAACTAAGCTAAGCTAAGATCTTT 57.274 29.630 14.36 0.00 38.25 2.52
417 418 8.880878 AACTAAGCTAAGCTAAGATCTTTAGC 57.119 34.615 21.58 21.58 45.68 3.09
436 437 9.444600 TCTTTAGCTTGTTAATTACTAAGGGTG 57.555 33.333 0.00 0.00 0.00 4.61
465 466 4.777896 AGAAGAGCTTCCTAACACCACATA 59.222 41.667 6.61 0.00 40.33 2.29
466 467 4.473477 AGAGCTTCCTAACACCACATAC 57.527 45.455 0.00 0.00 0.00 2.39
467 468 4.097418 AGAGCTTCCTAACACCACATACT 58.903 43.478 0.00 0.00 0.00 2.12
469 470 4.579869 AGCTTCCTAACACCACATACTTG 58.420 43.478 0.00 0.00 0.00 3.16
470 471 4.286032 AGCTTCCTAACACCACATACTTGA 59.714 41.667 0.00 0.00 0.00 3.02
471 472 4.392138 GCTTCCTAACACCACATACTTGAC 59.608 45.833 0.00 0.00 0.00 3.18
472 473 5.547465 CTTCCTAACACCACATACTTGACA 58.453 41.667 0.00 0.00 0.00 3.58
473 474 5.147330 TCCTAACACCACATACTTGACAG 57.853 43.478 0.00 0.00 0.00 3.51
474 475 4.591498 TCCTAACACCACATACTTGACAGT 59.409 41.667 0.00 0.00 36.99 3.55
475 476 5.071250 TCCTAACACCACATACTTGACAGTT 59.929 40.000 0.00 0.00 34.06 3.16
476 477 5.179368 CCTAACACCACATACTTGACAGTTG 59.821 44.000 0.00 0.00 34.06 3.16
487 488 1.896220 TGACAGTTGCCAATCAGTCC 58.104 50.000 4.99 0.00 0.00 3.85
496 497 1.293924 CCAATCAGTCCATCAGTCGC 58.706 55.000 0.00 0.00 0.00 5.19
498 499 0.817654 AATCAGTCCATCAGTCGCGA 59.182 50.000 3.71 3.71 0.00 5.87
502 504 0.807667 AGTCCATCAGTCGCGATTGC 60.808 55.000 25.01 11.75 37.91 3.56
504 506 0.744281 TCCATCAGTCGCGATTGCTA 59.256 50.000 25.01 10.88 39.65 3.49
520 522 6.194463 CGATTGCTATGTTTAACATGACCAG 58.806 40.000 19.55 10.39 39.53 4.00
521 523 6.183360 CGATTGCTATGTTTAACATGACCAGT 60.183 38.462 19.55 10.40 39.53 4.00
524 526 4.034048 GCTATGTTTAACATGACCAGTCCG 59.966 45.833 19.55 0.14 39.53 4.79
525 527 2.147958 TGTTTAACATGACCAGTCCGC 58.852 47.619 0.00 0.00 0.00 5.54
527 529 0.319083 TTAACATGACCAGTCCGCGT 59.681 50.000 4.92 0.00 0.00 6.01
528 530 0.389296 TAACATGACCAGTCCGCGTG 60.389 55.000 4.92 0.00 0.00 5.34
529 531 2.048222 CATGACCAGTCCGCGTGT 60.048 61.111 4.92 0.00 0.00 4.49
531 533 3.296709 ATGACCAGTCCGCGTGTCC 62.297 63.158 4.92 0.00 0.00 4.02
532 534 3.681835 GACCAGTCCGCGTGTCCT 61.682 66.667 4.92 0.00 0.00 3.85
533 535 3.628280 GACCAGTCCGCGTGTCCTC 62.628 68.421 4.92 0.00 0.00 3.71
534 536 4.436998 CCAGTCCGCGTGTCCTCC 62.437 72.222 4.92 0.00 0.00 4.30
535 537 4.778415 CAGTCCGCGTGTCCTCCG 62.778 72.222 4.92 0.00 0.00 4.63
568 1683 1.032114 AGCTTAACGGCCAATGGAGC 61.032 55.000 2.05 1.20 0.00 4.70
577 1692 4.776322 CAATGGAGCGGTCGGCCA 62.776 66.667 6.96 1.81 45.17 5.36
578 1693 4.028490 AATGGAGCGGTCGGCCAA 62.028 61.111 6.96 0.00 45.17 4.52
579 1694 3.976701 AATGGAGCGGTCGGCCAAG 62.977 63.158 6.96 0.00 45.17 3.61
611 1726 3.049674 TGCGGGAGAAAAGCAGCG 61.050 61.111 0.00 0.00 35.81 5.18
613 1728 2.863153 CGGGAGAAAAGCAGCGTG 59.137 61.111 0.00 0.00 0.00 5.34
637 1763 4.023021 GTCGTGTGAGGTAGAAGAAAGACT 60.023 45.833 0.00 0.00 0.00 3.24
639 1765 3.991121 GTGTGAGGTAGAAGAAAGACTGC 59.009 47.826 0.00 0.00 0.00 4.40
640 1766 3.006967 TGTGAGGTAGAAGAAAGACTGCC 59.993 47.826 0.00 0.00 38.77 4.85
642 1768 3.259374 TGAGGTAGAAGAAAGACTGCCTG 59.741 47.826 8.37 0.00 46.13 4.85
643 1769 2.027653 AGGTAGAAGAAAGACTGCCTGC 60.028 50.000 0.00 0.00 44.89 4.85
644 1770 2.027653 GGTAGAAGAAAGACTGCCTGCT 60.028 50.000 0.00 0.00 36.30 4.24
646 1772 3.220674 AGAAGAAAGACTGCCTGCTTT 57.779 42.857 0.00 0.00 37.07 3.51
649 1775 0.957362 GAAAGACTGCCTGCTTTGCT 59.043 50.000 0.00 0.00 34.69 3.91
655 1781 0.109597 CTGCCTGCTTTGCTTAACGG 60.110 55.000 0.00 0.00 0.00 4.44
657 1783 1.212751 CCTGCTTTGCTTAACGGCC 59.787 57.895 0.00 0.00 0.00 6.13
661 1789 1.336702 TGCTTTGCTTAACGGCCAATG 60.337 47.619 2.24 0.00 0.00 2.82
664 1792 1.173043 TTGCTTAACGGCCAATGGAG 58.827 50.000 2.05 0.00 0.00 3.86
666 1794 1.721487 CTTAACGGCCAATGGAGCG 59.279 57.895 2.05 0.00 0.00 5.03
667 1795 1.714899 CTTAACGGCCAATGGAGCGG 61.715 60.000 2.05 0.00 36.69 5.52
673 1801 3.781307 CCAATGGAGCGGTCGGGA 61.781 66.667 8.77 0.00 0.00 5.14
723 1859 3.584868 CTGCCTGCTTTGCTTGGGC 62.585 63.158 12.01 12.01 38.76 5.36
896 2051 2.094338 CGTTAAGCCGTCTTACCTTCCT 60.094 50.000 0.00 0.00 34.71 3.36
911 2066 2.266554 CTTCCTACTGCAAGAGAAGCG 58.733 52.381 0.00 0.00 37.43 4.68
933 2088 1.178276 TCACTCGGAGCTCTTCTTCC 58.822 55.000 14.64 0.00 0.00 3.46
977 2144 1.071605 GCGATGAGGTGAGTGAACAC 58.928 55.000 0.00 0.00 39.70 3.32
1311 2532 2.943978 CGACTGGGTCCACCACCTC 61.944 68.421 0.00 0.00 46.80 3.85
1586 2828 2.743928 CGAGGACACCAAGCAGCC 60.744 66.667 0.00 0.00 0.00 4.85
1587 2829 2.360475 GAGGACACCAAGCAGCCC 60.360 66.667 0.00 0.00 0.00 5.19
2379 3621 0.031585 TGTTCAACCTCGACTCCGTG 59.968 55.000 0.00 0.00 37.05 4.94
2454 3696 2.049063 GTCGGCTCAGTTCACGCT 60.049 61.111 0.00 0.00 0.00 5.07
2580 3822 1.817099 GCTCCAGGCATTCCAGTCG 60.817 63.158 0.00 0.00 41.35 4.18
2685 3927 0.030504 AGATCGAGAGCTGCGTGATG 59.969 55.000 0.00 0.00 0.00 3.07
2933 4178 0.463295 AGGAGCTGCCATGATGAACG 60.463 55.000 0.00 0.00 40.02 3.95
3031 4276 2.189499 GCCGCCACCTTGATGGATC 61.189 63.158 0.00 0.00 43.02 3.36
3092 4337 1.741770 GGCTGCAAGGTCTGGTACG 60.742 63.158 0.50 0.00 0.00 3.67
3198 4447 3.503748 GCTATTCGCCCATTTATCTTGCT 59.496 43.478 0.00 0.00 0.00 3.91
3199 4448 4.695455 GCTATTCGCCCATTTATCTTGCTA 59.305 41.667 0.00 0.00 0.00 3.49
3200 4449 5.355350 GCTATTCGCCCATTTATCTTGCTAT 59.645 40.000 0.00 0.00 0.00 2.97
3201 4450 6.538742 GCTATTCGCCCATTTATCTTGCTATA 59.461 38.462 0.00 0.00 0.00 1.31
3202 4451 7.227512 GCTATTCGCCCATTTATCTTGCTATAT 59.772 37.037 0.00 0.00 0.00 0.86
3203 4452 9.764363 CTATTCGCCCATTTATCTTGCTATATA 57.236 33.333 0.00 0.00 0.00 0.86
3204 4453 8.668510 ATTCGCCCATTTATCTTGCTATATAG 57.331 34.615 5.30 5.30 0.00 1.31
3205 4454 7.182817 TCGCCCATTTATCTTGCTATATAGT 57.817 36.000 11.38 0.00 0.00 2.12
3206 4455 8.301252 TCGCCCATTTATCTTGCTATATAGTA 57.699 34.615 11.38 3.94 0.00 1.82
3229 4478 8.422566 AGTATATTGGTTCTCTGTTAACTAGCC 58.577 37.037 7.22 2.55 0.00 3.93
3231 4480 6.869206 ATTGGTTCTCTGTTAACTAGCCTA 57.131 37.500 7.22 0.00 0.00 3.93
3245 4494 6.775939 AACTAGCCTACAAAAACGTCTTAC 57.224 37.500 0.00 0.00 0.00 2.34
3269 4518 6.154706 ACATTTTGAGACGGAGGTAGAACTAT 59.845 38.462 0.00 0.00 0.00 2.12
3315 4564 4.263462 ACACTCATAACCTTGCATCCTTCA 60.263 41.667 0.00 0.00 0.00 3.02
3316 4565 4.885907 CACTCATAACCTTGCATCCTTCAT 59.114 41.667 0.00 0.00 0.00 2.57
3317 4566 5.008415 CACTCATAACCTTGCATCCTTCATC 59.992 44.000 0.00 0.00 0.00 2.92
3326 4575 5.105473 CCTTGCATCCTTCATCAGTTCAAAT 60.105 40.000 0.00 0.00 0.00 2.32
3360 4618 5.505181 AGAGGATTATGGTCGCCATTATT 57.495 39.130 15.07 3.13 42.23 1.40
3361 4619 5.491982 AGAGGATTATGGTCGCCATTATTC 58.508 41.667 15.07 11.01 42.23 1.75
3368 4626 2.611751 TGGTCGCCATTATTCATTGTCG 59.388 45.455 0.00 0.00 0.00 4.35
3378 4636 7.689812 GCCATTATTCATTGTCGATAATCTTCG 59.310 37.037 4.19 0.00 40.46 3.79
3397 4655 1.595609 GTGTTCTCGAAATGCTTGCG 58.404 50.000 0.00 0.00 0.00 4.85
3436 4694 8.885693 AAGGAGGCATTAGAGTAAAAGAAAAT 57.114 30.769 0.00 0.00 0.00 1.82
3500 4758 4.799949 CGACTGGGAAAACAATATGCATTG 59.200 41.667 3.54 0.49 45.94 2.82
3516 4774 9.932207 AATATGCATTGAGTCAAAAAGATCAAA 57.068 25.926 10.14 0.00 35.47 2.69
3517 4775 9.932207 ATATGCATTGAGTCAAAAAGATCAAAA 57.068 25.926 10.14 0.00 35.47 2.44
3592 4854 9.927668 TTTTCTTGAACTTGAATCAAAGAGTTT 57.072 25.926 0.00 0.00 36.43 2.66
3712 4975 6.417930 GCTTTTATTCGCATGGGACTATTTTC 59.582 38.462 12.67 0.00 0.00 2.29
3713 4976 6.385649 TTTATTCGCATGGGACTATTTTCC 57.614 37.500 12.67 0.00 34.52 3.13
3735 4998 3.064545 CCATTGAGTTACAAGCTAGCAGC 59.935 47.826 18.83 0.00 42.02 5.25
3748 5011 4.314740 GCTAGCAGCTACATGTACTCTT 57.685 45.455 10.63 0.00 38.45 2.85
3749 5012 4.688021 GCTAGCAGCTACATGTACTCTTT 58.312 43.478 10.63 0.00 38.45 2.52
3750 5013 4.505922 GCTAGCAGCTACATGTACTCTTTG 59.494 45.833 10.63 0.00 38.45 2.77
3754 5017 4.932200 GCAGCTACATGTACTCTTTGTCTT 59.068 41.667 0.08 0.00 0.00 3.01
3759 5022 9.372369 AGCTACATGTACTCTTTGTCTTTAATC 57.628 33.333 0.08 0.00 0.00 1.75
3783 5046 5.006746 CCCATATTTGCTCTGTTCGACTAAC 59.993 44.000 0.00 0.00 38.67 2.34
3798 5061 6.694877 TCGACTAACTGTAGCTCATTGTAT 57.305 37.500 0.00 0.00 0.00 2.29
3801 5064 8.847196 TCGACTAACTGTAGCTCATTGTATTAT 58.153 33.333 0.00 0.00 0.00 1.28
3875 5138 2.298411 AGCTTTGGTTTTGCAGTGTG 57.702 45.000 0.00 0.00 0.00 3.82
3905 5168 8.915871 TTTCTCTGAAAGTTCTGAAATTGTTG 57.084 30.769 3.65 0.00 35.23 3.33
3906 5169 6.498304 TCTCTGAAAGTTCTGAAATTGTTGC 58.502 36.000 3.65 0.00 35.23 4.17
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.104444 TGGTTGGAGTTGTTTCTGTAGGTAA 60.104 40.000 0.00 0.00 0.00 2.85
1 2 4.409574 TGGTTGGAGTTGTTTCTGTAGGTA 59.590 41.667 0.00 0.00 0.00 3.08
2 3 3.201266 TGGTTGGAGTTGTTTCTGTAGGT 59.799 43.478 0.00 0.00 0.00 3.08
3 4 3.815809 TGGTTGGAGTTGTTTCTGTAGG 58.184 45.455 0.00 0.00 0.00 3.18
4 5 5.357032 ACTTTGGTTGGAGTTGTTTCTGTAG 59.643 40.000 0.00 0.00 0.00 2.74
5 6 5.124776 CACTTTGGTTGGAGTTGTTTCTGTA 59.875 40.000 0.00 0.00 0.00 2.74
6 7 4.082245 CACTTTGGTTGGAGTTGTTTCTGT 60.082 41.667 0.00 0.00 0.00 3.41
7 8 4.423732 CACTTTGGTTGGAGTTGTTTCTG 58.576 43.478 0.00 0.00 0.00 3.02
8 9 3.119137 GCACTTTGGTTGGAGTTGTTTCT 60.119 43.478 0.00 0.00 0.00 2.52
9 10 3.186909 GCACTTTGGTTGGAGTTGTTTC 58.813 45.455 0.00 0.00 0.00 2.78
10 11 2.416701 CGCACTTTGGTTGGAGTTGTTT 60.417 45.455 0.00 0.00 0.00 2.83
11 12 1.134175 CGCACTTTGGTTGGAGTTGTT 59.866 47.619 0.00 0.00 0.00 2.83
12 13 0.738389 CGCACTTTGGTTGGAGTTGT 59.262 50.000 0.00 0.00 0.00 3.32
13 14 1.021202 TCGCACTTTGGTTGGAGTTG 58.979 50.000 0.00 0.00 0.00 3.16
14 15 1.608590 CATCGCACTTTGGTTGGAGTT 59.391 47.619 0.00 0.00 0.00 3.01
15 16 1.238439 CATCGCACTTTGGTTGGAGT 58.762 50.000 0.00 0.00 0.00 3.85
16 17 0.523072 CCATCGCACTTTGGTTGGAG 59.477 55.000 0.00 0.00 0.00 3.86
17 18 0.893270 CCCATCGCACTTTGGTTGGA 60.893 55.000 0.00 0.00 0.00 3.53
18 19 1.586028 CCCATCGCACTTTGGTTGG 59.414 57.895 0.00 0.00 0.00 3.77
19 20 1.080569 GCCCATCGCACTTTGGTTG 60.081 57.895 0.00 0.00 37.47 3.77
20 21 0.037590 TAGCCCATCGCACTTTGGTT 59.962 50.000 0.00 0.00 41.38 3.67
21 22 0.392998 CTAGCCCATCGCACTTTGGT 60.393 55.000 0.00 0.00 41.38 3.67
22 23 1.718757 GCTAGCCCATCGCACTTTGG 61.719 60.000 2.29 0.00 41.38 3.28
23 24 1.026182 TGCTAGCCCATCGCACTTTG 61.026 55.000 13.29 0.00 41.38 2.77
24 25 0.322456 TTGCTAGCCCATCGCACTTT 60.322 50.000 13.29 0.00 41.38 2.66
25 26 0.745845 CTTGCTAGCCCATCGCACTT 60.746 55.000 13.29 0.00 41.38 3.16
26 27 1.153289 CTTGCTAGCCCATCGCACT 60.153 57.895 13.29 0.00 41.38 4.40
27 28 1.450312 ACTTGCTAGCCCATCGCAC 60.450 57.895 13.29 0.00 41.38 5.34
28 29 1.450134 CACTTGCTAGCCCATCGCA 60.450 57.895 13.29 0.00 41.38 5.10
29 30 1.153369 TCACTTGCTAGCCCATCGC 60.153 57.895 13.29 0.00 37.98 4.58
30 31 0.461548 TCTCACTTGCTAGCCCATCG 59.538 55.000 13.29 0.00 0.00 3.84
31 32 1.484240 ACTCTCACTTGCTAGCCCATC 59.516 52.381 13.29 0.00 0.00 3.51
32 33 1.577736 ACTCTCACTTGCTAGCCCAT 58.422 50.000 13.29 0.00 0.00 4.00
33 34 2.103373 CTACTCTCACTTGCTAGCCCA 58.897 52.381 13.29 0.00 0.00 5.36
34 35 1.410882 CCTACTCTCACTTGCTAGCCC 59.589 57.143 13.29 0.00 0.00 5.19
35 36 2.104170 ACCTACTCTCACTTGCTAGCC 58.896 52.381 13.29 0.00 0.00 3.93
36 37 3.316868 CCTACCTACTCTCACTTGCTAGC 59.683 52.174 8.10 8.10 0.00 3.42
37 38 4.528920 ACCTACCTACTCTCACTTGCTAG 58.471 47.826 0.00 0.00 0.00 3.42
38 39 4.587976 ACCTACCTACTCTCACTTGCTA 57.412 45.455 0.00 0.00 0.00 3.49
39 40 3.459710 ACCTACCTACTCTCACTTGCT 57.540 47.619 0.00 0.00 0.00 3.91
40 41 4.645588 ACATACCTACCTACTCTCACTTGC 59.354 45.833 0.00 0.00 0.00 4.01
41 42 7.055378 AGTACATACCTACCTACTCTCACTTG 58.945 42.308 0.00 0.00 0.00 3.16
42 43 7.210618 AGTACATACCTACCTACTCTCACTT 57.789 40.000 0.00 0.00 0.00 3.16
43 44 6.828307 AGTACATACCTACCTACTCTCACT 57.172 41.667 0.00 0.00 0.00 3.41
44 45 6.262720 CCAAGTACATACCTACCTACTCTCAC 59.737 46.154 0.00 0.00 0.00 3.51
45 46 6.159222 TCCAAGTACATACCTACCTACTCTCA 59.841 42.308 0.00 0.00 0.00 3.27
46 47 6.599445 TCCAAGTACATACCTACCTACTCTC 58.401 44.000 0.00 0.00 0.00 3.20
47 48 6.410621 CCTCCAAGTACATACCTACCTACTCT 60.411 46.154 0.00 0.00 0.00 3.24
48 49 5.769162 CCTCCAAGTACATACCTACCTACTC 59.231 48.000 0.00 0.00 0.00 2.59
49 50 5.195349 ACCTCCAAGTACATACCTACCTACT 59.805 44.000 0.00 0.00 0.00 2.57
50 51 5.301298 CACCTCCAAGTACATACCTACCTAC 59.699 48.000 0.00 0.00 0.00 3.18
51 52 5.452255 CACCTCCAAGTACATACCTACCTA 58.548 45.833 0.00 0.00 0.00 3.08
52 53 4.287552 CACCTCCAAGTACATACCTACCT 58.712 47.826 0.00 0.00 0.00 3.08
53 54 3.181468 GCACCTCCAAGTACATACCTACC 60.181 52.174 0.00 0.00 0.00 3.18
54 55 3.490419 CGCACCTCCAAGTACATACCTAC 60.490 52.174 0.00 0.00 0.00 3.18
55 56 2.691526 CGCACCTCCAAGTACATACCTA 59.308 50.000 0.00 0.00 0.00 3.08
56 57 1.480954 CGCACCTCCAAGTACATACCT 59.519 52.381 0.00 0.00 0.00 3.08
57 58 1.472728 CCGCACCTCCAAGTACATACC 60.473 57.143 0.00 0.00 0.00 2.73
58 59 1.206371 ACCGCACCTCCAAGTACATAC 59.794 52.381 0.00 0.00 0.00 2.39
59 60 1.479323 GACCGCACCTCCAAGTACATA 59.521 52.381 0.00 0.00 0.00 2.29
60 61 0.249398 GACCGCACCTCCAAGTACAT 59.751 55.000 0.00 0.00 0.00 2.29
61 62 1.669440 GACCGCACCTCCAAGTACA 59.331 57.895 0.00 0.00 0.00 2.90
62 63 1.079336 GGACCGCACCTCCAAGTAC 60.079 63.158 0.00 0.00 0.00 2.73
63 64 1.534476 TGGACCGCACCTCCAAGTA 60.534 57.895 0.00 0.00 34.70 2.24
64 65 2.847234 TGGACCGCACCTCCAAGT 60.847 61.111 0.00 0.00 34.70 3.16
65 66 2.046892 CTGGACCGCACCTCCAAG 60.047 66.667 0.00 0.00 37.36 3.61
66 67 2.847234 ACTGGACCGCACCTCCAA 60.847 61.111 0.00 0.00 37.36 3.53
67 68 3.311110 GACTGGACCGCACCTCCA 61.311 66.667 0.00 0.00 36.34 3.86
68 69 4.436998 CGACTGGACCGCACCTCC 62.437 72.222 0.00 0.00 0.00 4.30
93 94 6.539324 GGTGAAATGAAATGTTGCATCATTG 58.461 36.000 20.78 0.00 41.58 2.82
94 95 5.349270 CGGTGAAATGAAATGTTGCATCATT 59.651 36.000 15.71 15.71 43.62 2.57
95 96 4.865925 CGGTGAAATGAAATGTTGCATCAT 59.134 37.500 4.37 4.37 35.39 2.45
96 97 4.236147 CGGTGAAATGAAATGTTGCATCA 58.764 39.130 0.00 0.00 0.00 3.07
97 98 3.613737 CCGGTGAAATGAAATGTTGCATC 59.386 43.478 0.00 0.00 0.00 3.91
98 99 3.587923 CCGGTGAAATGAAATGTTGCAT 58.412 40.909 0.00 0.00 0.00 3.96
99 100 2.865670 GCCGGTGAAATGAAATGTTGCA 60.866 45.455 1.90 0.00 0.00 4.08
100 101 1.726248 GCCGGTGAAATGAAATGTTGC 59.274 47.619 1.90 0.00 0.00 4.17
101 102 2.336667 GGCCGGTGAAATGAAATGTTG 58.663 47.619 1.90 0.00 0.00 3.33
102 103 1.067915 CGGCCGGTGAAATGAAATGTT 60.068 47.619 20.10 0.00 0.00 2.71
103 104 0.525761 CGGCCGGTGAAATGAAATGT 59.474 50.000 20.10 0.00 0.00 2.71
104 105 0.525761 ACGGCCGGTGAAATGAAATG 59.474 50.000 31.76 0.00 0.00 2.32
105 106 1.253100 AACGGCCGGTGAAATGAAAT 58.747 45.000 31.76 0.00 0.00 2.17
106 107 1.033574 AAACGGCCGGTGAAATGAAA 58.966 45.000 31.76 0.00 0.00 2.69
107 108 1.536331 GTAAACGGCCGGTGAAATGAA 59.464 47.619 31.76 0.00 0.00 2.57
108 109 1.158434 GTAAACGGCCGGTGAAATGA 58.842 50.000 31.76 1.66 0.00 2.57
109 110 0.875728 TGTAAACGGCCGGTGAAATG 59.124 50.000 31.76 0.00 0.00 2.32
110 111 1.606903 TTGTAAACGGCCGGTGAAAT 58.393 45.000 31.76 10.82 0.00 2.17
111 112 1.386533 TTTGTAAACGGCCGGTGAAA 58.613 45.000 31.76 19.68 0.00 2.69
112 113 1.334243 CTTTTGTAAACGGCCGGTGAA 59.666 47.619 31.76 14.46 0.00 3.18
113 114 0.945813 CTTTTGTAAACGGCCGGTGA 59.054 50.000 31.76 15.27 0.00 4.02
114 115 0.664224 ACTTTTGTAAACGGCCGGTG 59.336 50.000 31.76 11.98 0.00 4.94
115 116 0.664224 CACTTTTGTAAACGGCCGGT 59.336 50.000 31.76 23.68 0.00 5.28
116 117 0.039888 CCACTTTTGTAAACGGCCGG 60.040 55.000 31.76 11.88 0.00 6.13
117 118 0.662077 GCCACTTTTGTAAACGGCCG 60.662 55.000 26.86 26.86 33.31 6.13
118 119 3.188773 GCCACTTTTGTAAACGGCC 57.811 52.632 0.00 0.00 33.31 6.13
119 120 0.386113 TGGCCACTTTTGTAAACGGC 59.614 50.000 0.00 0.00 38.85 5.68
120 121 1.269361 GGTGGCCACTTTTGTAAACGG 60.269 52.381 33.91 0.00 0.00 4.44
121 122 1.598430 CGGTGGCCACTTTTGTAAACG 60.598 52.381 33.91 21.38 0.00 3.60
122 123 1.269361 CCGGTGGCCACTTTTGTAAAC 60.269 52.381 33.91 13.87 0.00 2.01
123 124 1.033574 CCGGTGGCCACTTTTGTAAA 58.966 50.000 33.91 0.00 0.00 2.01
124 125 0.183014 TCCGGTGGCCACTTTTGTAA 59.817 50.000 33.91 11.12 0.00 2.41
125 126 0.183014 TTCCGGTGGCCACTTTTGTA 59.817 50.000 33.91 13.03 0.00 2.41
126 127 1.076632 TTCCGGTGGCCACTTTTGT 60.077 52.632 33.91 0.00 0.00 2.83
127 128 0.821711 TCTTCCGGTGGCCACTTTTG 60.822 55.000 33.91 20.60 0.00 2.44
128 129 0.112412 ATCTTCCGGTGGCCACTTTT 59.888 50.000 33.91 10.52 0.00 2.27
129 130 0.112412 AATCTTCCGGTGGCCACTTT 59.888 50.000 33.91 13.82 0.00 2.66
130 131 0.112412 AAATCTTCCGGTGGCCACTT 59.888 50.000 33.91 16.62 0.00 3.16
131 132 0.609131 CAAATCTTCCGGTGGCCACT 60.609 55.000 33.91 10.97 0.00 4.00
132 133 1.883021 CAAATCTTCCGGTGGCCAC 59.117 57.895 28.57 28.57 0.00 5.01
133 134 1.976474 GCAAATCTTCCGGTGGCCA 60.976 57.895 0.00 0.00 0.00 5.36
134 135 0.393808 TAGCAAATCTTCCGGTGGCC 60.394 55.000 0.00 0.00 0.00 5.36
135 136 0.733150 GTAGCAAATCTTCCGGTGGC 59.267 55.000 0.00 0.00 0.00 5.01
136 137 1.006832 CGTAGCAAATCTTCCGGTGG 58.993 55.000 0.00 0.00 0.00 4.61
158 159 1.650645 GAAATCGGGACAACGTCGTAC 59.349 52.381 0.00 0.00 32.65 3.67
159 160 1.541147 AGAAATCGGGACAACGTCGTA 59.459 47.619 0.00 0.00 32.65 3.43
160 161 0.316204 AGAAATCGGGACAACGTCGT 59.684 50.000 0.00 0.00 32.65 4.34
161 162 0.989890 GAGAAATCGGGACAACGTCG 59.010 55.000 0.00 0.00 32.65 5.12
162 163 1.356938 GGAGAAATCGGGACAACGTC 58.643 55.000 0.00 0.00 34.94 4.34
163 164 0.036671 GGGAGAAATCGGGACAACGT 60.037 55.000 0.00 0.00 34.94 3.99
164 165 1.082117 CGGGAGAAATCGGGACAACG 61.082 60.000 0.00 0.00 0.00 4.10
165 166 0.743345 CCGGGAGAAATCGGGACAAC 60.743 60.000 0.00 0.00 42.32 3.32
166 167 1.600107 CCGGGAGAAATCGGGACAA 59.400 57.895 0.00 0.00 42.32 3.18
167 168 3.305314 CCGGGAGAAATCGGGACA 58.695 61.111 0.00 0.00 42.32 4.02
172 173 4.393680 TGTCAAAATAACCGGGAGAAATCG 59.606 41.667 6.32 0.00 0.00 3.34
173 174 5.163652 CCTGTCAAAATAACCGGGAGAAATC 60.164 44.000 6.32 0.00 0.00 2.17
174 175 4.705023 CCTGTCAAAATAACCGGGAGAAAT 59.295 41.667 6.32 0.00 0.00 2.17
175 176 4.076394 CCTGTCAAAATAACCGGGAGAAA 58.924 43.478 6.32 0.00 0.00 2.52
176 177 3.328343 TCCTGTCAAAATAACCGGGAGAA 59.672 43.478 6.32 0.00 0.00 2.87
177 178 2.907696 TCCTGTCAAAATAACCGGGAGA 59.092 45.455 6.32 0.00 0.00 3.71
178 179 3.343941 TCCTGTCAAAATAACCGGGAG 57.656 47.619 6.32 0.00 0.00 4.30
179 180 3.791953 TTCCTGTCAAAATAACCGGGA 57.208 42.857 6.32 0.00 0.00 5.14
180 181 5.400066 AATTTCCTGTCAAAATAACCGGG 57.600 39.130 6.32 0.00 0.00 5.73
181 182 7.599171 ACTTAATTTCCTGTCAAAATAACCGG 58.401 34.615 0.00 0.00 0.00 5.28
182 183 9.769093 CTACTTAATTTCCTGTCAAAATAACCG 57.231 33.333 0.00 0.00 0.00 4.44
187 188 9.574516 AGTGTCTACTTAATTTCCTGTCAAAAT 57.425 29.630 0.00 0.00 31.66 1.82
188 189 8.974060 AGTGTCTACTTAATTTCCTGTCAAAA 57.026 30.769 0.00 0.00 31.66 2.44
189 190 8.208224 TGAGTGTCTACTTAATTTCCTGTCAAA 58.792 33.333 0.00 0.00 37.25 2.69
190 191 7.732025 TGAGTGTCTACTTAATTTCCTGTCAA 58.268 34.615 0.00 0.00 37.25 3.18
191 192 7.297936 TGAGTGTCTACTTAATTTCCTGTCA 57.702 36.000 0.00 0.00 37.25 3.58
192 193 8.779354 AATGAGTGTCTACTTAATTTCCTGTC 57.221 34.615 0.00 0.00 37.25 3.51
200 201 9.355215 CGACTTGTTAATGAGTGTCTACTTAAT 57.645 33.333 0.00 0.00 37.25 1.40
201 202 8.355169 ACGACTTGTTAATGAGTGTCTACTTAA 58.645 33.333 0.00 0.00 37.25 1.85
202 203 7.879070 ACGACTTGTTAATGAGTGTCTACTTA 58.121 34.615 0.00 0.00 37.25 2.24
203 204 6.746120 ACGACTTGTTAATGAGTGTCTACTT 58.254 36.000 0.00 0.00 37.25 2.24
204 205 6.328641 ACGACTTGTTAATGAGTGTCTACT 57.671 37.500 0.00 0.00 40.66 2.57
205 206 6.128902 CCAACGACTTGTTAATGAGTGTCTAC 60.129 42.308 0.00 0.00 39.29 2.59
206 207 5.924254 CCAACGACTTGTTAATGAGTGTCTA 59.076 40.000 0.00 0.00 39.29 2.59
207 208 4.750098 CCAACGACTTGTTAATGAGTGTCT 59.250 41.667 0.00 0.00 39.29 3.41
208 209 4.510340 ACCAACGACTTGTTAATGAGTGTC 59.490 41.667 0.00 0.00 39.29 3.67
209 210 4.448210 ACCAACGACTTGTTAATGAGTGT 58.552 39.130 0.00 0.00 39.29 3.55
210 211 5.694910 AGTACCAACGACTTGTTAATGAGTG 59.305 40.000 0.00 0.00 39.29 3.51
211 212 5.850614 AGTACCAACGACTTGTTAATGAGT 58.149 37.500 0.00 0.00 39.29 3.41
212 213 6.780706 AAGTACCAACGACTTGTTAATGAG 57.219 37.500 0.00 0.00 39.29 2.90
213 214 7.411274 CAAAAGTACCAACGACTTGTTAATGA 58.589 34.615 0.00 0.00 39.29 2.57
214 215 6.635239 CCAAAAGTACCAACGACTTGTTAATG 59.365 38.462 0.00 0.00 39.29 1.90
215 216 6.319405 ACCAAAAGTACCAACGACTTGTTAAT 59.681 34.615 0.00 0.00 39.29 1.40
216 217 5.647225 ACCAAAAGTACCAACGACTTGTTAA 59.353 36.000 0.00 0.00 39.29 2.01
217 218 5.184711 ACCAAAAGTACCAACGACTTGTTA 58.815 37.500 0.00 0.00 39.29 2.41
218 219 4.011698 ACCAAAAGTACCAACGACTTGTT 58.988 39.130 0.00 0.00 43.09 2.83
219 220 3.613030 ACCAAAAGTACCAACGACTTGT 58.387 40.909 0.00 0.00 37.22 3.16
220 221 4.625972 AACCAAAAGTACCAACGACTTG 57.374 40.909 0.00 0.00 37.22 3.16
221 222 4.274214 GCTAACCAAAAGTACCAACGACTT 59.726 41.667 0.00 0.00 38.81 3.01
222 223 3.811497 GCTAACCAAAAGTACCAACGACT 59.189 43.478 0.00 0.00 0.00 4.18
223 224 3.560896 TGCTAACCAAAAGTACCAACGAC 59.439 43.478 0.00 0.00 0.00 4.34
224 225 3.560896 GTGCTAACCAAAAGTACCAACGA 59.439 43.478 0.00 0.00 0.00 3.85
225 226 3.312973 TGTGCTAACCAAAAGTACCAACG 59.687 43.478 0.00 0.00 0.00 4.10
226 227 4.498513 GGTGTGCTAACCAAAAGTACCAAC 60.499 45.833 3.76 0.00 40.22 3.77
227 228 3.633065 GGTGTGCTAACCAAAAGTACCAA 59.367 43.478 3.76 0.00 40.22 3.67
228 229 3.215975 GGTGTGCTAACCAAAAGTACCA 58.784 45.455 3.76 0.00 40.22 3.25
229 230 3.909776 GGTGTGCTAACCAAAAGTACC 57.090 47.619 3.76 0.00 40.22 3.34
237 238 1.493022 AAGGACTTGGTGTGCTAACCA 59.507 47.619 6.95 6.95 46.85 3.67
238 239 2.271944 AAGGACTTGGTGTGCTAACC 57.728 50.000 1.76 1.76 46.85 2.85
239 240 2.742589 GCTAAGGACTTGGTGTGCTAAC 59.257 50.000 0.00 0.00 46.85 2.34
240 241 2.370519 TGCTAAGGACTTGGTGTGCTAA 59.629 45.455 0.00 0.00 46.85 3.09
241 242 1.974957 TGCTAAGGACTTGGTGTGCTA 59.025 47.619 0.00 0.00 46.85 3.49
243 244 0.875059 GTGCTAAGGACTTGGTGTGC 59.125 55.000 0.00 0.00 37.27 4.57
244 245 1.148310 CGTGCTAAGGACTTGGTGTG 58.852 55.000 0.00 0.00 0.00 3.82
245 246 0.756903 ACGTGCTAAGGACTTGGTGT 59.243 50.000 0.00 0.00 0.00 4.16
246 247 2.736144 TACGTGCTAAGGACTTGGTG 57.264 50.000 0.00 0.00 0.00 4.17
247 248 3.975168 ATTACGTGCTAAGGACTTGGT 57.025 42.857 0.00 0.00 0.00 3.67
248 249 5.007385 AGTATTACGTGCTAAGGACTTGG 57.993 43.478 0.00 0.00 0.00 3.61
249 250 5.686397 GCTAGTATTACGTGCTAAGGACTTG 59.314 44.000 0.00 0.00 0.00 3.16
250 251 5.593502 AGCTAGTATTACGTGCTAAGGACTT 59.406 40.000 12.58 0.00 31.97 3.01
251 252 5.008811 CAGCTAGTATTACGTGCTAAGGACT 59.991 44.000 13.43 0.00 32.34 3.85
252 253 5.213675 CAGCTAGTATTACGTGCTAAGGAC 58.786 45.833 13.43 0.00 32.34 3.85
253 254 4.885907 ACAGCTAGTATTACGTGCTAAGGA 59.114 41.667 13.43 0.00 32.34 3.36
254 255 5.184340 ACAGCTAGTATTACGTGCTAAGG 57.816 43.478 13.43 7.09 32.34 2.69
255 256 6.196724 GTCAACAGCTAGTATTACGTGCTAAG 59.803 42.308 13.43 7.59 32.34 2.18
256 257 6.032094 GTCAACAGCTAGTATTACGTGCTAA 58.968 40.000 13.43 0.00 32.34 3.09
257 258 5.356190 AGTCAACAGCTAGTATTACGTGCTA 59.644 40.000 13.43 0.00 32.34 3.49
258 259 4.158025 AGTCAACAGCTAGTATTACGTGCT 59.842 41.667 0.00 9.66 33.40 4.40
259 260 4.421948 AGTCAACAGCTAGTATTACGTGC 58.578 43.478 0.00 6.14 0.00 5.34
260 261 5.862323 ACAAGTCAACAGCTAGTATTACGTG 59.138 40.000 0.00 0.00 0.00 4.49
261 262 6.022163 ACAAGTCAACAGCTAGTATTACGT 57.978 37.500 0.00 0.00 0.00 3.57
262 263 6.669977 GCAACAAGTCAACAGCTAGTATTACG 60.670 42.308 0.00 0.00 0.00 3.18
263 264 6.369065 AGCAACAAGTCAACAGCTAGTATTAC 59.631 38.462 0.00 0.00 0.00 1.89
264 265 6.464222 AGCAACAAGTCAACAGCTAGTATTA 58.536 36.000 0.00 0.00 0.00 0.98
265 266 5.308825 AGCAACAAGTCAACAGCTAGTATT 58.691 37.500 0.00 0.00 0.00 1.89
266 267 4.899502 AGCAACAAGTCAACAGCTAGTAT 58.100 39.130 0.00 0.00 0.00 2.12
267 268 4.336889 AGCAACAAGTCAACAGCTAGTA 57.663 40.909 0.00 0.00 0.00 1.82
268 269 3.199880 AGCAACAAGTCAACAGCTAGT 57.800 42.857 0.00 0.00 0.00 2.57
269 270 3.681897 CCTAGCAACAAGTCAACAGCTAG 59.318 47.826 11.23 11.23 46.71 3.42
270 271 3.557054 CCCTAGCAACAAGTCAACAGCTA 60.557 47.826 0.00 0.00 33.83 3.32
271 272 2.498167 CCTAGCAACAAGTCAACAGCT 58.502 47.619 0.00 0.00 36.20 4.24
272 273 1.537202 CCCTAGCAACAAGTCAACAGC 59.463 52.381 0.00 0.00 0.00 4.40
273 274 3.126001 TCCCTAGCAACAAGTCAACAG 57.874 47.619 0.00 0.00 0.00 3.16
274 275 3.411446 CATCCCTAGCAACAAGTCAACA 58.589 45.455 0.00 0.00 0.00 3.33
275 276 2.749621 CCATCCCTAGCAACAAGTCAAC 59.250 50.000 0.00 0.00 0.00 3.18
276 277 2.290896 CCCATCCCTAGCAACAAGTCAA 60.291 50.000 0.00 0.00 0.00 3.18
277 278 1.281867 CCCATCCCTAGCAACAAGTCA 59.718 52.381 0.00 0.00 0.00 3.41
278 279 1.559682 TCCCATCCCTAGCAACAAGTC 59.440 52.381 0.00 0.00 0.00 3.01
279 280 1.668826 TCCCATCCCTAGCAACAAGT 58.331 50.000 0.00 0.00 0.00 3.16
280 281 2.806945 TTCCCATCCCTAGCAACAAG 57.193 50.000 0.00 0.00 0.00 3.16
281 282 3.534357 TTTTCCCATCCCTAGCAACAA 57.466 42.857 0.00 0.00 0.00 2.83
282 283 3.534357 TTTTTCCCATCCCTAGCAACA 57.466 42.857 0.00 0.00 0.00 3.33
299 300 6.519679 AAAAAGGTTGGTCGTCTAGTTTTT 57.480 33.333 0.00 0.00 0.00 1.94
321 322 2.550606 CGTCCATTCCAACTCCGAAAAA 59.449 45.455 0.00 0.00 0.00 1.94
322 323 2.147958 CGTCCATTCCAACTCCGAAAA 58.852 47.619 0.00 0.00 0.00 2.29
323 324 1.345089 TCGTCCATTCCAACTCCGAAA 59.655 47.619 0.00 0.00 0.00 3.46
324 325 0.970640 TCGTCCATTCCAACTCCGAA 59.029 50.000 0.00 0.00 0.00 4.30
325 326 0.245539 GTCGTCCATTCCAACTCCGA 59.754 55.000 0.00 0.00 0.00 4.55
326 327 0.739813 GGTCGTCCATTCCAACTCCG 60.740 60.000 0.00 0.00 0.00 4.63
327 328 0.323629 TGGTCGTCCATTCCAACTCC 59.676 55.000 0.00 0.00 39.03 3.85
328 329 2.178912 TTGGTCGTCCATTCCAACTC 57.821 50.000 1.21 0.00 43.91 3.01
331 332 3.992943 ATAGTTGGTCGTCCATTCCAA 57.007 42.857 1.21 0.00 43.91 3.53
332 333 3.605634 CAATAGTTGGTCGTCCATTCCA 58.394 45.455 1.21 0.00 43.91 3.53
333 334 2.943033 CCAATAGTTGGTCGTCCATTCC 59.057 50.000 1.21 0.00 45.93 3.01
345 346 3.634397 TCCTTCTCAGCCCAATAGTTG 57.366 47.619 0.00 0.00 0.00 3.16
346 347 3.137360 GGATCCTTCTCAGCCCAATAGTT 59.863 47.826 3.84 0.00 0.00 2.24
347 348 2.708325 GGATCCTTCTCAGCCCAATAGT 59.292 50.000 3.84 0.00 0.00 2.12
348 349 2.039613 GGGATCCTTCTCAGCCCAATAG 59.960 54.545 12.58 0.00 38.68 1.73
349 350 2.057922 GGGATCCTTCTCAGCCCAATA 58.942 52.381 12.58 0.00 38.68 1.90
350 351 0.849417 GGGATCCTTCTCAGCCCAAT 59.151 55.000 12.58 0.00 38.68 3.16
351 352 0.253347 AGGGATCCTTCTCAGCCCAA 60.253 55.000 12.58 0.00 41.34 4.12
352 353 0.984961 CAGGGATCCTTCTCAGCCCA 60.985 60.000 12.58 0.00 41.34 5.36
353 354 1.704007 CCAGGGATCCTTCTCAGCCC 61.704 65.000 12.58 0.00 39.12 5.19
354 355 0.985490 ACCAGGGATCCTTCTCAGCC 60.985 60.000 12.58 0.00 0.00 4.85
355 356 1.794714 TACCAGGGATCCTTCTCAGC 58.205 55.000 12.58 0.00 0.00 4.26
356 357 4.844349 TTTTACCAGGGATCCTTCTCAG 57.156 45.455 12.58 0.00 0.00 3.35
380 381 2.152016 AGCTTAGTTTTGAGGCGAACC 58.848 47.619 0.00 0.00 0.00 3.62
381 382 4.669453 GCTTAGCTTAGTTTTGAGGCGAAC 60.669 45.833 1.11 0.00 0.00 3.95
382 383 3.435671 GCTTAGCTTAGTTTTGAGGCGAA 59.564 43.478 1.11 0.00 0.00 4.70
383 384 3.000727 GCTTAGCTTAGTTTTGAGGCGA 58.999 45.455 1.11 0.00 0.00 5.54
384 385 3.003480 AGCTTAGCTTAGTTTTGAGGCG 58.997 45.455 0.00 0.00 33.89 5.52
385 386 5.875359 TCTTAGCTTAGCTTAGTTTTGAGGC 59.125 40.000 13.44 0.00 40.44 4.70
386 387 7.984617 AGATCTTAGCTTAGCTTAGTTTTGAGG 59.015 37.037 13.44 0.00 40.44 3.86
387 388 8.940768 AGATCTTAGCTTAGCTTAGTTTTGAG 57.059 34.615 13.44 0.00 40.44 3.02
388 389 9.726438 AAAGATCTTAGCTTAGCTTAGTTTTGA 57.274 29.630 13.44 0.00 40.44 2.69
391 392 9.320352 GCTAAAGATCTTAGCTTAGCTTAGTTT 57.680 33.333 21.73 11.53 42.91 2.66
392 393 8.880878 GCTAAAGATCTTAGCTTAGCTTAGTT 57.119 34.615 21.73 7.84 42.91 2.24
410 411 9.444600 CACCCTTAGTAATTAACAAGCTAAAGA 57.555 33.333 0.00 0.00 0.00 2.52
411 412 9.227777 ACACCCTTAGTAATTAACAAGCTAAAG 57.772 33.333 0.00 0.00 0.00 1.85
413 414 9.880157 CTACACCCTTAGTAATTAACAAGCTAA 57.120 33.333 0.00 0.00 0.00 3.09
414 415 9.258629 TCTACACCCTTAGTAATTAACAAGCTA 57.741 33.333 0.00 0.00 0.00 3.32
415 416 8.142485 TCTACACCCTTAGTAATTAACAAGCT 57.858 34.615 0.00 0.00 0.00 3.74
416 417 8.782339 TTCTACACCCTTAGTAATTAACAAGC 57.218 34.615 0.00 0.00 0.00 4.01
423 424 8.041919 GCTCTTCTTTCTACACCCTTAGTAATT 58.958 37.037 0.00 0.00 0.00 1.40
424 425 7.400627 AGCTCTTCTTTCTACACCCTTAGTAAT 59.599 37.037 0.00 0.00 0.00 1.89
425 426 6.724905 AGCTCTTCTTTCTACACCCTTAGTAA 59.275 38.462 0.00 0.00 0.00 2.24
426 427 6.254522 AGCTCTTCTTTCTACACCCTTAGTA 58.745 40.000 0.00 0.00 0.00 1.82
427 428 5.088026 AGCTCTTCTTTCTACACCCTTAGT 58.912 41.667 0.00 0.00 0.00 2.24
428 429 5.669164 AGCTCTTCTTTCTACACCCTTAG 57.331 43.478 0.00 0.00 0.00 2.18
429 430 5.046520 GGAAGCTCTTCTTTCTACACCCTTA 60.047 44.000 9.23 0.00 39.45 2.69
430 431 4.263112 GGAAGCTCTTCTTTCTACACCCTT 60.263 45.833 9.23 0.00 39.45 3.95
431 432 3.262151 GGAAGCTCTTCTTTCTACACCCT 59.738 47.826 9.23 0.00 39.45 4.34
432 433 3.262151 AGGAAGCTCTTCTTTCTACACCC 59.738 47.826 9.23 0.00 38.87 4.61
433 434 4.545208 AGGAAGCTCTTCTTTCTACACC 57.455 45.455 9.23 0.00 38.87 4.16
434 435 6.366604 GTGTTAGGAAGCTCTTCTTTCTACAC 59.633 42.308 9.23 11.68 41.46 2.90
435 436 6.456501 GTGTTAGGAAGCTCTTCTTTCTACA 58.543 40.000 9.23 5.25 41.46 2.74
436 437 5.870433 GGTGTTAGGAAGCTCTTCTTTCTAC 59.130 44.000 9.23 4.66 41.46 2.59
465 466 2.880890 GACTGATTGGCAACTGTCAAGT 59.119 45.455 22.25 14.38 43.44 3.16
466 467 2.227388 GGACTGATTGGCAACTGTCAAG 59.773 50.000 25.27 14.28 43.44 3.02
467 468 2.229792 GGACTGATTGGCAACTGTCAA 58.770 47.619 25.27 0.00 44.39 3.18
469 470 1.896220 TGGACTGATTGGCAACTGTC 58.104 50.000 20.59 20.59 35.37 3.51
470 471 2.224843 TGATGGACTGATTGGCAACTGT 60.225 45.455 0.00 7.04 37.61 3.55
471 472 2.422479 CTGATGGACTGATTGGCAACTG 59.578 50.000 0.00 3.77 37.61 3.16
472 473 2.040813 ACTGATGGACTGATTGGCAACT 59.959 45.455 0.00 0.00 37.61 3.16
473 474 2.421424 GACTGATGGACTGATTGGCAAC 59.579 50.000 0.00 0.00 0.00 4.17
474 475 2.715046 GACTGATGGACTGATTGGCAA 58.285 47.619 0.68 0.68 0.00 4.52
475 476 1.405933 CGACTGATGGACTGATTGGCA 60.406 52.381 0.00 0.00 0.00 4.92
476 477 1.293924 CGACTGATGGACTGATTGGC 58.706 55.000 0.00 0.00 0.00 4.52
487 488 2.130395 ACATAGCAATCGCGACTGATG 58.870 47.619 23.32 18.48 45.49 3.07
496 497 6.117911 TGGTCATGTTAAACATAGCAATCG 57.882 37.500 0.00 0.00 36.53 3.34
498 499 6.095440 GGACTGGTCATGTTAAACATAGCAAT 59.905 38.462 3.10 0.00 36.53 3.56
502 504 4.034048 GCGGACTGGTCATGTTAAACATAG 59.966 45.833 3.10 0.00 36.53 2.23
504 506 2.747446 GCGGACTGGTCATGTTAAACAT 59.253 45.455 3.10 0.00 39.91 2.71
531 533 1.992170 CTTGTCGTAAAGGACCGGAG 58.008 55.000 9.46 0.00 36.07 4.63
532 534 0.037975 GCTTGTCGTAAAGGACCGGA 60.038 55.000 9.46 0.00 36.07 5.14
533 535 0.037605 AGCTTGTCGTAAAGGACCGG 60.038 55.000 0.00 0.00 36.07 5.28
534 536 1.792006 AAGCTTGTCGTAAAGGACCG 58.208 50.000 0.00 0.00 36.07 4.79
535 537 3.122445 CGTTAAGCTTGTCGTAAAGGACC 59.878 47.826 9.86 0.00 36.07 4.46
536 538 3.122445 CCGTTAAGCTTGTCGTAAAGGAC 59.878 47.826 9.86 0.00 39.33 3.85
577 1692 2.519302 ACACGCTTGGCTTGCCTT 60.519 55.556 13.18 0.00 30.76 4.35
578 1693 3.289834 CACACGCTTGGCTTGCCT 61.290 61.111 13.18 0.00 30.76 4.75
611 1726 1.884579 TCTTCTACCTCACACGACCAC 59.115 52.381 0.00 0.00 0.00 4.16
613 1728 3.255149 TCTTTCTTCTACCTCACACGACC 59.745 47.826 0.00 0.00 0.00 4.79
637 1763 1.956043 CCGTTAAGCAAAGCAGGCA 59.044 52.632 0.00 0.00 0.00 4.75
639 1765 1.212751 GGCCGTTAAGCAAAGCAGG 59.787 57.895 0.00 0.00 0.00 4.85
640 1766 0.313672 TTGGCCGTTAAGCAAAGCAG 59.686 50.000 0.00 0.00 0.00 4.24
641 1767 0.965439 ATTGGCCGTTAAGCAAAGCA 59.035 45.000 0.00 0.00 0.00 3.91
642 1768 1.349234 CATTGGCCGTTAAGCAAAGC 58.651 50.000 0.00 0.00 0.00 3.51
643 1769 1.543802 TCCATTGGCCGTTAAGCAAAG 59.456 47.619 0.00 0.00 0.00 2.77
644 1770 1.543802 CTCCATTGGCCGTTAAGCAAA 59.456 47.619 0.00 0.00 0.00 3.68
646 1772 1.312371 GCTCCATTGGCCGTTAAGCA 61.312 55.000 10.89 0.00 0.00 3.91
649 1775 1.747367 CCGCTCCATTGGCCGTTAA 60.747 57.895 0.00 0.00 0.00 2.01
657 1783 2.202932 CTCCCGACCGCTCCATTG 60.203 66.667 0.00 0.00 0.00 2.82
686 1814 0.612174 GCCTTCCTTGTTCCCCTTCC 60.612 60.000 0.00 0.00 0.00 3.46
687 1815 0.405973 AGCCTTCCTTGTTCCCCTTC 59.594 55.000 0.00 0.00 0.00 3.46
723 1859 1.199624 GTGCAACGTGAAAAAGGCAG 58.800 50.000 0.00 0.00 31.10 4.85
868 2023 3.346631 GACGGCTTAACGGGAGCGA 62.347 63.158 0.00 0.00 41.03 4.93
896 2051 1.824852 TGATCCGCTTCTCTTGCAGTA 59.175 47.619 0.00 0.00 0.00 2.74
911 2066 1.398692 AGAAGAGCTCCGAGTGATCC 58.601 55.000 10.93 0.00 0.00 3.36
933 2088 1.003597 ACAGCAGCAGCAAGAGGAG 60.004 57.895 3.17 0.00 45.49 3.69
1062 2229 4.248842 TGGTGGTGGTGCAGTCGG 62.249 66.667 0.00 0.00 0.00 4.79
1069 2236 2.670934 GAGCTGCTGGTGGTGGTG 60.671 66.667 7.01 0.00 0.00 4.17
1272 2493 2.983977 CTTGGCGTCGTCGTCGTTG 61.984 63.158 13.09 0.00 45.30 4.10
1356 2577 2.124403 GGGTGAGGCTCCTGCATG 60.124 66.667 12.86 0.00 41.91 4.06
2424 3666 4.078516 CCGACGGGAAGGTGGACC 62.079 72.222 5.81 0.00 34.06 4.46
2493 3735 3.056313 GATGACAAGCTTGGCGCCC 62.056 63.158 29.18 15.82 39.74 6.13
2891 4136 3.771160 ATCTCCACGCCGACACCC 61.771 66.667 0.00 0.00 0.00 4.61
2933 4178 3.445096 TCCTAACTAACCTACCGACTTGC 59.555 47.826 0.00 0.00 0.00 4.01
3031 4276 4.001652 ACAAGTGACATGATCAGCAGAAG 58.998 43.478 0.00 0.00 38.28 2.85
3162 4410 2.032549 CGAATAGCGGCTTTGATGGAAG 60.033 50.000 8.26 0.00 36.03 3.46
3203 4452 8.422566 GGCTAGTTAACAGAGAACCAATATACT 58.577 37.037 8.61 0.00 0.00 2.12
3204 4453 8.422566 AGGCTAGTTAACAGAGAACCAATATAC 58.577 37.037 8.61 0.00 0.00 1.47
3205 4454 8.548880 AGGCTAGTTAACAGAGAACCAATATA 57.451 34.615 8.61 0.00 0.00 0.86
3206 4455 7.439108 AGGCTAGTTAACAGAGAACCAATAT 57.561 36.000 8.61 0.00 0.00 1.28
3229 4478 9.155053 GTCTCAAAATGTAAGACGTTTTTGTAG 57.845 33.333 16.32 13.15 42.72 2.74
3231 4480 7.964545 GTCTCAAAATGTAAGACGTTTTTGT 57.035 32.000 16.32 0.00 42.72 2.83
3245 4494 4.822026 AGTTCTACCTCCGTCTCAAAATG 58.178 43.478 0.00 0.00 0.00 2.32
3288 4537 7.136822 AGGATGCAAGGTTATGAGTGTTATA 57.863 36.000 0.00 0.00 0.00 0.98
3326 4575 9.542462 CGACCATAATCCTCTACATTTTTCTTA 57.458 33.333 0.00 0.00 0.00 2.10
3335 4584 2.673258 TGGCGACCATAATCCTCTACA 58.327 47.619 0.00 0.00 0.00 2.74
3336 4585 3.963428 ATGGCGACCATAATCCTCTAC 57.037 47.619 9.27 0.00 43.19 2.59
3360 4618 6.330278 AGAACACGAAGATTATCGACAATGA 58.670 36.000 0.00 0.00 45.48 2.57
3361 4619 6.558614 CGAGAACACGAAGATTATCGACAATG 60.559 42.308 0.00 0.00 45.48 2.82
3378 4636 1.069906 ACGCAAGCATTTCGAGAACAC 60.070 47.619 0.00 0.00 45.62 3.32
3397 4655 5.086104 TGCCTCCTTTCACAGAAGTATAC 57.914 43.478 0.00 0.00 0.00 1.47
3436 4694 6.972328 GCTGAATGTTATTATTTCCTCGCAAA 59.028 34.615 0.00 0.00 0.00 3.68
3454 4712 2.082231 CACCACCAAGAGAGCTGAATG 58.918 52.381 0.00 0.00 0.00 2.67
3516 4774 4.581824 CGGATCCTGGATGATTTGAATGTT 59.418 41.667 15.25 0.00 0.00 2.71
3517 4775 4.139786 CGGATCCTGGATGATTTGAATGT 58.860 43.478 15.25 0.00 0.00 2.71
3528 4786 1.215173 TCAATTTGGCGGATCCTGGAT 59.785 47.619 9.42 9.42 35.26 3.41
3687 4950 5.438761 AATAGTCCCATGCGAATAAAAGC 57.561 39.130 0.00 0.00 0.00 3.51
3688 4951 6.918022 GGAAAATAGTCCCATGCGAATAAAAG 59.082 38.462 0.00 0.00 0.00 2.27
3712 4975 3.609853 TGCTAGCTTGTAACTCAATGGG 58.390 45.455 17.23 0.00 35.35 4.00
3713 4976 3.064545 GCTGCTAGCTTGTAACTCAATGG 59.935 47.826 17.23 0.00 38.45 3.16
3735 4998 9.099454 GGGATTAAAGACAAAGAGTACATGTAG 57.901 37.037 5.62 0.00 0.00 2.74
3736 4999 8.598916 TGGGATTAAAGACAAAGAGTACATGTA 58.401 33.333 0.08 0.08 0.00 2.29
3737 5000 7.458397 TGGGATTAAAGACAAAGAGTACATGT 58.542 34.615 2.69 2.69 0.00 3.21
3738 5001 7.921786 TGGGATTAAAGACAAAGAGTACATG 57.078 36.000 0.00 0.00 0.00 3.21
3743 5006 8.470002 GCAAATATGGGATTAAAGACAAAGAGT 58.530 33.333 0.00 0.00 0.00 3.24
3744 5007 8.689972 AGCAAATATGGGATTAAAGACAAAGAG 58.310 33.333 0.00 0.00 0.00 2.85
3745 5008 8.593945 AGCAAATATGGGATTAAAGACAAAGA 57.406 30.769 0.00 0.00 0.00 2.52
3746 5009 8.689972 AGAGCAAATATGGGATTAAAGACAAAG 58.310 33.333 0.00 0.00 0.00 2.77
3747 5010 8.469200 CAGAGCAAATATGGGATTAAAGACAAA 58.531 33.333 0.00 0.00 0.00 2.83
3748 5011 7.615365 ACAGAGCAAATATGGGATTAAAGACAA 59.385 33.333 0.00 0.00 0.00 3.18
3749 5012 7.118723 ACAGAGCAAATATGGGATTAAAGACA 58.881 34.615 0.00 0.00 0.00 3.41
3750 5013 7.573968 ACAGAGCAAATATGGGATTAAAGAC 57.426 36.000 0.00 0.00 0.00 3.01
3754 5017 6.260050 GTCGAACAGAGCAAATATGGGATTAA 59.740 38.462 0.00 0.00 0.00 1.40
3759 5022 3.535561 AGTCGAACAGAGCAAATATGGG 58.464 45.455 0.00 0.00 0.00 4.00
3875 5138 9.741647 AATTTCAGAACTTTCAGAGAAAATGAC 57.258 29.630 0.00 0.00 32.59 3.06


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.