>input_sequence_41188
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------ATGCCCACGCAGCAGCTCACGACATTCCAGCTGCTCCCGCCCGCCCACGCGCACGGCGACCGCCGACTGC----
--------------------------------------ACCACCACCAGCAGCTCGCCTGCGGCGGCGG---------CC
TCTGGGACCCCGCGTCGGTGCTCGACCGCCGGGCCAGCCCCGCCGCGCATCCCACGCTGTCTTCCCCCTCGCCCCTGCCC
GCCGGCGTGGCGGCCCTCGCCAAGAACGTCTCCGCGGCCCCGCCGGCGCAGGCGCAGGCATGGCC---GCCGCCGCCGCC
GGGCCCCGGGGCCAACGACGACGACGCCAAGGACGACTGGGTCCACCACCTCCCGCCCCTCGACATGGCCGGCTGGGGCG
ACCCCCACGCCGCCGCCATGCAGGAG---------------CCTCACCCGCCGCCCTCCTCGCAGGACAGCACCTTCCTC
CGCTGGATCATCGGCGGCGGGGACGACGACGACGACGAC------TCCGGGGCCGCCATGGACGGCACTGACCCCCCGGA
TCTTGACCTCGACCGCATCACCATGCTCCCCCGCCACCCGCCGCCGCTCATGGGGGGCGCGGGCCACGGCCTCCCGTTCA
CGCTCGCCGGCGAGGACACCAAGCAGCCCTTCCGCGCCTCGCCGGGCGCCGCCCTGCATCAGCAGCAGCACCACCTGCCG
CACGCGTTCCACGGCGGCGCGTTCCCTTCCTTCGACCCGGCGGCGCCGGCCAAGCGGCAGCAGCAGCAGCACCCGATGGC
CGGCGCGGCGCCGCCCAAGCTGCCCCCCTTCGCCGGCCACGGCGCTGCAGCCGCCCTCAAGCCCAAGGCGGAGGCGCCGG
TCGACGACGGCGCGGCCGCGGCGGCGGTGGACCAGCTCACCGAGGCGGCCAGGCTCGTCGAGGCCGGCGACGCCTACGGC
GCGCGCGAGATATTGGCACGGCTCAATCACCGGCTCCCCGCCGCCCCCGCGGCCGGGACGCCACTGCTCCGCTCCGCCTT
CTACTTCAAGGAGGCTCTGAGCGTTGCCCTGGACACCACCGGCGCCCACGCCTCCTCGGCGGCCGTGGCGTCCACGCCCG
TCGACGTCCTCCTCAAGCTCGGCGCCTACAAGGCCTTCTCCGAGCTCTCCCCGGTGCTCCAGTTCGCGCACTTCACCTGC
GTGCAGGCCGTGCTCGACGAGCTCGGCGGCGCCGGCTGCATCCACGTGCTCGACTTCGACATCGGCGTCGGCGAGCAGTG
GGCGTCGCTGATGCAGGAGCTGGCGCAGCGCCGCCCCGGCGCCGCGCTCAAGGTGACCGCATTGGTGCTGCCGTCGACGC
ACCACCCGCTCGAGCTGCAGCTCATCCACGAGAACCTCGCCAACTTCGCCGCCGAGCTCGGGGTCCCCTTCCAGTTCGTC
GTGTTCAACCTCGACTCCGTGGACCCCACGGAGCTCCTCGCCATTGCCGGCGGCGACGCGATCGCGGTCCACCTTCCCGT
CGGCTCAGTTCACGCTGCCGCGGTGCCGTCGGTCCTTCACCTGGTGAGGCGGCTGGGCGCCAAGCTTGTCATCTCGGTCG
ACCGCAGTGGTGACCGCGGCGAGCTGCCGTTCGCGGCGCACCTGCTCCAGGCATTCCAGTCGTGCGCGTTCCTGCTCGAG
TCCCTGGACGCCGTGGGCACCGAGCCCGACGTGGCGAGCAAGATCGAGCGCTTCCTGATCCAGCCAAAGATCGAGAGCTG
CGTGATGAGGAGGCACCAGGCCGCGGCCGCCGGCGACAAGCTGCTGCCATGGCGGACAATGTTCACCTCGGCCGGGTTCG
TGCCGGTGCACATAAGCAACTTCGCCGAGGCGCAGGCCGACTCGCTCCTGAAGAAGGTGCCGGTGAGGGGCTTCCGCGTG
GAGAAGCGCGCC---GGATCGCTGGTCCTGCATTGGCAGCGCGCGGAGCTGGTGTGGGTGTCGGCGTGGAGATGCTGA--
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>chr5A_1_TraesCS5A01G535000
TTACCTACAGAAACAACTCCAACCAAAGTGCGATGGGCTAGCAAGTGAGAGTAGGTAGGTATGTACTTGGAGGTGCGGTC
CAGTCGCCGCCCGCAATGATGCAACATTTCATTTCACCGGCCGTTTACAAAAGTGGCCACCGGAAGATTTGCTACGCCGT
ACGACGTTGTCCCGATTTCTCCCGGTTATTTTGACAGGAAATTAAGTAGACACTCATTAACAAGTCGTTGGTACTTTTGG
TTAGCACACCAAGTCCTTAGCACGTAATACTAGCTGTTGACTTGTTGCTAGGGATGGGAAAAAACTAGACGACCAACCTT
TTTTTTCGGAGTTGGAATGGACGACCAACTATTGGGCTGAGAAGGATCCCTGGTAAAAAAGGTTCGCCTCAAAACTAAGC
TAAGCTAAGATCTTTAGCTTGTTAATTACTAAGGGTGTAGAAAGAAGAGCTTCCTAACACCACATACTTGACAGTTGCCA
ATCAGTCCATCAGTCGCGA-TTGCTATGTTTAACATGACCAGTCCGCGTGTCCTCCGG----------------------
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---------------------------------------------------TCCTTTACGACAAGCTTAACGGCCAATGG
AGCGGTCGGCCAAGGCAAGCCAAGCGTGTGCGGGAGAAAAGCAGCGTG-----------GTCGTGTGAGGTAGAAGAAAG
ACTGCCTGCTTTGCTTAACGGCCA--ATGGAGCGGTCGGGAGGGAGGGGCCGGGGAA-------GGGGAACAAGGAAGGC
TGCCTGCTTTGCT-TGGGCTGCCTTTTTCACGTTGCACGCTACCA---TTCCGCAACGTGACACGGACACTACCCCGCCC
ACCAACGAATAAAACTGACGCTCACTGCTCC-------------ACCTCCACCCCGCCATTGCCCGCACCTCTGCCCTCC
TCCTCCT---AATGGCCCCCCGTCGCTCCCGTTAAGCCGTCTTACCTTCCTACTGCAAGAGAAGCGGATCACTCGGAGCT
CTTCTTCC---TC---CTCTTGCTGCTGCTGTGGCGCGGCGATG------AGGTGAGTGAACACAGCTCGTGCGTGTGGG
GGATCCATGCCCACGCAGCAGCTCACGACATTCCAGCTGCTCCCGCCCGCCCACGCGCACGGCGACCGCCGACTGC----
--------------------------------------ACCACCACCAGCAGCTCGCCTGCGGCGGCGG---------CC
TCTGGGACCCCGCGTCGGTGCTCGACCGCCGGGCCAGCCCCGCCGCGCATCCCACGCTGTCTTCCCCCTCGCCCCTGCCC
GCCGGCGTGGCGGCCCTCGCCAAGAACGTCTCCGCGGCCCCGCCGGCGCAGGCGCAGGCATGGCC---GCCGCCGCCGCC
GGGCCCCGGGGCCAACGACGACGACGCCAAGGACGACTGGGTCCACCACCTCCCGCCCCTCGACATGGCCGGCTGGGGCG
ACCCCCACGCCGCCGCCATGCAGGAG---------------CCTCACCCGCCGCCCTCCTCGCAGGACAGCACCTTCCTC
CGCTGGATCATCGGCGGCGGGGACGACGACGACGACGAC------TCCGGGGCCGCCATGGACGGCACTGACCCCCCGGA
TCTTGACCTCGACCGCATCACCATGCTCCCCCGCCACCCGCCGCCGCTCATGGGGGGCGCGGGCCACGGCCTCCCGTTCA
CGCTCGCCGGCGAGGACACCAAGCAGCCCTTCCGCGCCTCGCCGGGCGCCGCCCTGCATCAGCAGCAGCACCACCTGCCG
CACGCGTTCCACGGCGGCGCGTTCCCTTCCTTCGACCCGGCGGCGCCGGCCAAGCGGCAGCAGCAGCAGCACCCGATGGC
CGGCGCGGCGCCGCCCAAGCTGCCCCCCTTCGCCGGCCACGGCGCTGCAGCCGCCCTCAAGCCCAAGGCGGAGGCGCCGG
TCGACGACGGCGCGGCCGCGGCGGCGGTGGACCAGCTCACCGAGGCGGCCAGGCTCGTCGAGGCCGGCGACGCCTACGGC
GCGCGCGAGATATTGGCACGGCTCAATCACCGGCTCCCCGCCGCCCCCGCGGCCGGGACGCCACTGCTCCGCTCCGCCTT
CTACTTCAAGGAGGCTCTGAGCGTTGCCCTGGACACCACCGGCGCCCACGCCTCCTCGGCGGCCGTGGCGTCCACGCCCG
TCGACGTCCTCCTCAAGCTCGGCGCCTACAAGGCCTTCTCCGAGCTCTCCCCGGTGCTCCAGTTCGCGCACTTCACCTGC
GTGCAGGCCGTGCTCGACGAGCTCGGCGGCGCCGGCTGCATCCACGTGCTCGACTTCGACATCGGCGTCGGCGAGCAGTG
GGCGTCGCTGATGCAGGAGCTGGCGCAGCGCCGCCCCGGCGCCGCGCTCAAGGTGACCGCATTGGTGCTGCCGTCGACGC
ACCACCCGCTCGAGCTGCAGCTCATCCACGAGAACCTCGCCAACTTCGCCGCCGAGCTCGGGGTCCCCTTCCAGTTCGTC
GTGTTCAACCTCGACTCCGTGGACCCCACGGAGCTCCTCGCCATTGCCGGCGGCGACGCGATCGCGGTCCACCTTCCCGT
CGGCTCAGTTCACGCTGCCGCGGTGCCGTCGGTCCTTCACCTGGTGAGGCGGCTGGGCGCCAAGCTTGTCATCTCGGTCG
ACCGCAGTGGTGACCGCGGCGAGCTGCCGTTCGCGGCGCACCTGCTCCAGGCATTCCAGTCGTGCGCGTTCCTGCTCGAG
TCCCTGGACGCCGTGGGCACCGAGCCCGACGTGGCGAGCAAGATCGAGCGCTTCCTGATCCAGCCAAAGATCGAGAGCTG
CGTGATGAGGAGGCACCAGGCCGCGGCCGCCGGCGACAAGCTGCTGCCATGGCGGACAATGTTCACCTCGGCCGGGTTCG
TGCCGGTGCACATAAGCAACTTCGCCGAGGCGCAGGCCGACTCGCTCCTGAAGAAGGTGCCGGTGAGGGGCTTCCGCGTG
GAGAAGCGCGCC---GGATCGCTGGTCCTGCATTGGCAGCGCGCGGAGCTGGTGTGGGTGTCGGCGTGGAGATGCTGAAG
GAGCTGCCATGATGAACGCAAGTCGGTAGGTTAGTTAGGACTAATGATCCTAACAAATATTTCTGCTGCGACGATCAAAT
TACTCGTTAAGCATTTCGCCGCCACCTTGATGGATCTTCTGCTGATCATGTCACTTGTTTTGAGTAGATTGTTTGGCAGG
CTGCAAGGTCTGGTACGGTATCAATGTA-TTTTAGTACTCATGTTACTATTTTCATGTGGAATCAA--TATGGTTATGGT
GTTTGAAATCTTCCATCAAAGCCGCTATTC-GCCCATTTATCTTGCTATATAGTATATTGGTTCTCTGTTAACTAGCCTA
CAAAAACGTCTTACATTTTGAGACGGAGGTAGAACTATATAATAAAGCTCCAAAAATATAACACTCATAACCTTGCATCC
TTCATCAGTTCAAATAAGAAAAATG---------TAGAGGATTATGGTCGCCATTATTCATTGTCGATAATCTTCGTGTT
CTCGAAATGCTTGCGTATACTTCTGTGAAAGGAGGCATTAGAGTAAAAGAAAATTTGCGAGGAAATAATAACATTCAGCT
CTCTTGGTGGTGGTCGACTGGGAAAACAATATGCATTGAGTCAAAAAGATCAAAACATTCAAATCATCCAGGATCCGCCA
AATTGACATCT----AATATGATCAAATTTTCTTGAACTTGAATCAAAGAGTTTTTGAAAAAG-GTTACAAGTAATTTAG
AAGTTGTCTCTACATACAGGCAGATTATAAATGATTTGTGTATTCCACTACTTGTCCATTTTTTTTTTTGCTTTTATTCG
CATGGGACTATTTTCCCATTGAGTTACAAGCTAGCAGCTACATGTACTCTTTGTCTTTAATCCCATATTTGCTCTGTTCG
ACTAACTGTAGCTCATTGTATTATCAATGAAGGTATTTTCTGTAAGTAAATTTATGCTAGGCATCATACATGGTCAGAAG
CTTTGGTTTTGCAGTGTGTCATTTTCTCTGAAAGTTCTGAAATTGTTGCGAACACT
>chr4D_438
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-------------------------------------TAGAAAGAAGAGCTTCCTAACACCACATTTGTC-------CCA
ATCAGTCAATCAGTCGTGTTTTGGTTTGTTTAACATGACCAACCCCGGCACCTAATATATCGTTGATTATTCAACAATAT
CAAGCAGATTTGTTTGGCATCGATGCTTGGCTTTGCTCAAATCTTCTTTCAAAAAATAAATGAAGAAAAATACGAGATCA
TCCAGAAAAGGTCTGCCTCACGACAGTATCTTCAAAAACCTTATGGCATGCGACCAAACAACGAACAAGCACGCTGCTCC
TAGGCCAAACCTTTACCAAGGGACCACCGCACGTGCGTCGATACCGACGGGTCCAACCAAAGCTTATACTTCATATTTTC
ATCGCGAAGCCGAGTTTCGAGCCAACACCTTCAACAAAAAGACAATGCACACACGTCGATCGACATTGTCTGACCAAGTC
AGAGAGGCCAGATCATGGGTTTTCATCCGGAGTATGCACATAACTGTCGTCAAAGCCGTCATTGCCGATAGTCATTCTAT
CGGCTGGCGACGACTCGCAAGCTGGATCTCGACATTGTGAGATCACGATGCCCTACACAGCTAGAGAAAACGTCAAAAGT
AGGTAGAGGACCTCGCCATCCAACTTCCAAACACTACTGCATCACCTTTGATCTCCGTCGATGGGAGTGGCGGAGATGTT
GGATAGAGGGTTACACGGGGAAGACTGCTTGTTAGTGTGCAAAATAGAGAAAACTAATGAGACGTCGGATCTTGGATGGA
TGTCTTGGATGAACCACAGGAGCTGGTGGAAGGACCTAATCTATCTATAACTATTAGTCAGTGGAGTTTCATGAAATGAT
AATGAAGGTCCACCTATTCCGCGGGATACATATATAGGATCTGATGGCTCTTGTCAGATTTTTTTTCCTATTTTTGCACA
CTAAGTGCTTTGATTGCAGTTTGGCCGTGTTACACCGCCATTGCAGCCACCTCACATCCGCTGACCACATCCTCGGGGGC
GTCACCCAGTGTACACCACCCTCATGCCTTCGCAGACAACTGTCACGTCGCATGTGGCCTGCACGGTCCACGTGTTGGAT
AAACACGACCATGGTATCACAGCGGTAACAACCTCGGAGATTAATCGTCTCTCAACACGTCAAGGATAAACTACATCTCA
TATCGATGGTGTCGTCTCGACGCTCGCGCACACGCGGACACGTGTATGCCCTCCTTTACGACAAGCTTAACGGCCAATGG
AGTGGTCGGC-----CAAGCCAAGCGTGTGCGGGAGAAAAGCAG-----------TGCCGTCGTGTGAGGTAGAAGAAAG
ACAGGAAAGGTGGCCTAGCCAGGTCGATTGATCCATCGGTCGGGAGGGGCCGGCCAAGGGGAAGG--------GGAAGGC
TGCCTGCTTTGGG-TGGG-TGCCTTTTTCACGTTGCACGCTACCA---TTCCGCAACGTGACACGGACACAACCCCGCCC
ACCAACGAATAAAACTGACGCTCACTGCTCCCTCCCCAC-CTCCACCTCCACCCCGCCATTGCCCGCACCTCTGCCCTCC
TCCTCCTCCCAATGGCCCCCCGCCGCTCCCGTTAAGCCGTCTTACCTTACCACTGCAAGAGAAGCAGATCACTCGGAGCT
CTTCTTCTTCTTC---CTCCTGCTGCTGCTGTGGCGCGGCGATG------AGGTGAGTGAGCAGAGCTTGCCCGGGAGGG
GGATCGATGCCCACGCAGCAGCTCACGACATTCCAGCTGCTCCCACCCGCTCACGCGCACGGCGACCGGCGACAGTACCA
G------------------TACCAGCACCACCACCAGGACCAGCAGCAGCAGCTCGCCTGCGGCGGCGGAGGAGGAGGCC
TGTGGGACCCCGCGTCGGTGCTCGACCGCCGGGCCAGCCCCGCCGCGCATCCCACGCTGTCTTCCCCCTCGCCCCTGCCC
GCCGGCGTGGCGGCCCTCGCCAAGAACGTCTCCGCGGCCCCGCCGGCGCAGGC------------ATGGCCGCCCCCGCC
GGGCCCCGGGGCGAACGACGACGACGCCAAGGACGACTGGGTCCACCACCTGCCGCCCCTCGACATGGCCGGCTGGGGCG
ACCCGCACGCCGCCGCGATGCAGGAG---------------CCGCACCCGCCGCCCTCCTCGCAGGACAGCACCTTCCTC
CGCTGGATCATCGGCGGCGGGGACGACGACGACGACGAC------TCCGGGGCCGCCATGGACGGCGCTGACCCCCCGGA
TCTTGACCTCGACCGCATCAGCATGCTCCCCCGCCACCCGCCGC---TCATGGGGGGCACGGGCCACGGCCTCCCGTTCA
CGCTCGCCGGCGAGGACACCAAGCAGCAGTTCCGCCCCTCGCCGGGCGCCGCCCTGCATCAGCAGCAGCACCACCTGCCG
CACGCGTTCCACGGCGGCGCGTTCCCTTCCTTCGACCCGGCGAAGCGGCA------GCAGCAGCAGCAGCACCCGATGGC
CGGCGCGGCGCCGCCCAAGCAGCCCCCCTTCGCCGGCCACGGCGCTGCGGCCGCCCTCAAGCCCAAGGCGGAGGCGCCGG
CCGACGACGGCGCGGCCGCGGCGGCGGTGGACCAGCTCACCGAGGCGGCCAGGCTCGTCGAGGCCGGCGACGCCTACGGC
GCGCGCGAGATATTGGCACGGCTCAATCACCGGCTCCCCGCCGCCCCCGCGGCCGGGACGCCACTGCTCCGCTCCGCCTT
CTACTTCAAGGAGGCTCTCAGCGTTGCCCTGGACACCACCGGCGCCCACGCCTCCTCGGCGGCCGTGGCGTCCACCCCCG
TCGACGTCCTCCTCAAGCTCGGCGCCTACAAGGCCTTCTCCGAGCTCTCCCCGGTGCTCCAGTTCGCGCACTTCACCTGC
GTCCAGGCCGTGCTCGACGAGCTCGGCGGCGCCGGCTGCATCCACGTGCTCGACTTCGACATCGGGGTCGGCGAGCAGTG
GGCGTCGCTGATGCAGGAGCTGGCGCAGCGCCGCCCCGGCGCCGCGCTCAAGGTCACCGCATTGGTGCTGCCGTCGACGC
ACCACCCGCTCGAGCTGCAGCTCATCCACGAGAACCTCGCCAACTTCGCCGCGGAGCTCGGGGTCCCCTTCCAGTTCGTC
GTGTTCAACCTCGACTCCGTCGACCCCACAGAGCTCCTCGCCATTGCCGGCGGCGACGCAATCGCCGTGCACCTTCCCGT
CGGCTCAGTTCACGCCGCCGCGGTGCCATCGGTCCTTCACCTGGTCAGGCGGCTCGGCGCCAAGCTTGTCATCTCGGTCG
ACCGCAGTGGTGACCGCGGCGAGCTGCCGTTCGCGGCGCACCTGCTCCAGGCATTCCAGTCCTGCGCGTTCCTGCTCGAG
TCCCTGGATGCCGTGGGCACCGAACCCGATGTCGCGAGCAAGATCGAGCGCTTCCTGATCCAGCCAAAGATCGAGAGCTG
CGTGATCAGGAGGCACCAGGCCGCGACCGCCGGCGACAAGCTGCTGCCATGGCGGACAATGTTCACCTCGGCCGGGTTCG
TGCCGGTGCACATAAGCAACTTCGCCGAGGCGCAGGCCGATTCACTCCTGAAGAAGGTGCCGGTGAGGGGCTTCCGCGTG
GAGAAGCGCGCC---GGATCGCTGGTCCTGCATTGGCAGCGCGCGGAGCTGGTGTCGGTGTCGGCATGGAGATGCTGAAG
GAGCTGCCAGGATGAACACAAGTCGGTAGGTTAGTTAGGACTAATGATCCTAACAA-TATTTCTGCTGCGACGATCAAAT
TACTCGTTAAGCATTTCGCCG---CCTTGATGGATGTTCTGCTGATCATGTCACTTGTTTTGAGTAGATTGTTTGGCAGG
CTGCAAGGTCTGGTACAGTATCAATGTA-TTTTAGTACTCAAGTTACTATTTTCATGTGGAATCAA--TATGGTTATGGT
GTTTGAAATGTTCCATCAAAGCCGCTATTCGGTCTATTTATCTTGC---------TATTGGTTCTCTGTTAACTAGCTTT
CAAAAACGTCTTATATTTTGAGACGGAGGTAGAACTAGATAATAAAGCTCCAAAAACATAACACTCATAACCTTGCATCC
TTC---AGTTCAAAAAAGAAAAACTTGCCTGCTTTAGAGGATTATGGTGGCCATTATCGATTGTCCATAATCTTCATGTT
CTCGAAATGCTTGCATATACTTCTGTGAAAGGAGGCATTAGAGTAAAAGAAAAATTGCGAGGAAATAATAATATTCAGCT
CTCTTGGTGGTGGTCGACTGGGAAAACAATATGCATTTAGTCAAGAAGACCAAGGCAATCAAATCTTCCAGGATCCGCCA
AATTGACATCT----AATATGAAAAAAATTCCTTGAACTTGAATCAAAGAGTTCTTGAAAAAG-GTTACAAGTAATTTAG
AAGTTGTCTCTACATACGGGCAGATTATAAATGATTTGTGTATTGCACTACTTGTCCATTTTTTTAAT---TTTTATTCA
CCTGGGACTATTATTTCATTGAATTACAAGCTAGCAGGCTACATATAC-----TCTGTAATACCATATTTGCTCTGTTCG
ACTAAATGTAGCTCATCGTACTAGCAATGAAGGTATTTTCTATAAGTAAATTTATGCTAGGCATCATACATGGTCAGAAG
CTTTGGCTTTGCAGTGTATCATTTTCTCTGAAAGTTCTGAAATT-TTAGGAACACT
>chr4B_538
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---------------------------------------------------TCCTTTACGACAAGCTTAACGGCCAATGG
AGTGGTCGGGCG-----AGCCAAGCGTGTGCGGGAGAAAAGCAGCCTATGGCCAGTGTCGTCGTGTGAGGTAGAAGAAAG
GCAGGAAAGGTGGCGCCAGGTCGACGATTGATCCATCGGTCGGGAGGGGCCGGCCAAGGGGAAGGGGGAAGAAGGAAGGC
TGCCTGCTTTGCTCTGGG-TGCCTTTTTCACGTTGCACGCTACCACCATTCCGCAACGTGACACGGACGC-------CCC
CCCAACGAATAAAACTGACGCTCACTGCTCCCCCCTCCCTCTCCACCCCCACCCCGCCATTGCT-----------CCTCC
TCCTCCTCCCAATGGCCCCCCGCCGCTCCCGCTAAGCCGTCTTACTTTCCGACTGCAAGAGAAGCAGATCACTCGGAGC-
--TCTTCTTCTTC---CTCTTGCTGCTGCTGTGGCGCGGCGATGGCGGTGAGGTGAGGTGAGGGAGCTCGTGCGGGAGGG
GGATCGATGCCCACGCAGCAGCTCACGACATTCCAGCTGCTCCCGCCCGCCCACGCGCACGGCGACCGGCGACAGTACCA
G------------------CACCAGCACC------------AGCAGCAGCAGCTCGCCTGCGGCGGCGGAGGAGGAGGCC
TGTGGGACCCGGCGTCGGTGCTCGACCGCCGGGCCAGCCCCGCCGCGCATCCCACGCTGTCTTCCCCCTCGTCCCTGCCC
GCCGGCGTGGCGGCCCTCGCCAAGAACGTGTCCGCGGCCCCGCCGGCGCAGGCGCAGGCGCAGGCATGGCCGCCGCCACC
G---------------GACGACGACGCCAAGGACGACTGGGTGCACCACCTGCCGCCCCTCGACATGGCCGGCTGGGGCG
ACCCCCACGCCGCCGCGATGCAGGACCAGGGCCAGGGCCACCCGCACCCGCCGCCCTCCTCGCAGGACAGCACCTTCCTC
CGCTGGATCATCGGCGGCGGGGACGACGACGACGACGACGACGGCTCCGGGCCCGCCATGGACGGCGCCGACCCCCCGGA
TCTTGACCTCGACCGCATCACCATGCTCCCCCGCCACCCGCCGC---TCATGGGGGGCGCGGGCCACGGCCTCCCGTTCA
CGCTCGCCGGCGAGGACGCCAAGCAGCAGTTCCGCCCCTCGCCGGGCGCCGCCCTGCATCAGCAGCAGCACCACCTGCCG
CACGCGTTCCACGGCGGCGCGTTCCCTTCCTTCGACGCGCCGGCGCCGGCGA------------AGCGGCACCCGATGGC
CGGCGCGGCGCCGCCCAAGCTGGCCCCCTTCGCCGGCCACGGCGCTGCGGCCGCCCTGAAGCCCAAGGCGGAGGCGCCGG
CCGACGACGGCGCGGCCGCGGCGGCGGTGGACCAGCTCACCGAGGCGGCCAGGCTCGTCGAGGCCGGCGACGCCTACGGC
GCGCGCGAGATATTGGCACGGCTCAATCACCGGCTCCCCGCCGCCCCAGCGGCCGGGACGCCGCTCCTCCGCTCCGCCTT
CTACTTCAAGGAGGCTCTGAGCGTTGCCCTCGACACCACCGGCGCCCACGCCTCGTCGGCGGCCGTGGCGTCCACGCCCG
TCGACGTCCTCCTAAAGCTCGGCGCCTACAAGGCCTTCTCCGAGCTCTCCCCGGTGCTCCAGTTCGCGCACTTCACCTGC
GTGCAGGCCGTGCTCGACGAGCTCGGCGGCGCCGGCTGCATCCACGTGCTCGACTTCGACATCGGCGTCGGCGAGCAGTG
GGCGTCGCTGATGCAGGAGCTGGCGCAGCGCCGCCCCGGCGCCGCGCTCAAGGTGACCGCATTGGTGCTGCCGTCGACGC
ACCACCCGCTGGAGCTGCAGCTCATCCACGAGAACCTCGCCAACTTCGCCGCCGAGCTCGGGGTGCCCTTCCAGTTCGTC
GTGTTCAACCTCGACTCCGTCGACCCCACGGAGCTCCTCGCAATTGCCGGCGGCGACGCCATCGCCGTGCACCTTCCCGT
CGGCTCGGTTCACGCCGCCGCGGTGCCATCGGTCCTTCACCTGGTCAGGCGGCTCGGCGCCAAGCTTGTCATCTCGGTGG
ACCGCAGTGGTGACCGCGGCGAGCTGCCGTTCGCGGCGCACCTGCTCCAGGCATTCCAGTCCTGCGCGTTCCTGCTCGAG
TCCCTGGACGCCGTGGGCACCGAGCCCGACGTCGCGAGCAAGATCGAGCGCTTCCTGATCCAGCCAAAGATCGAGAGCTG
CGTGATCAGGAGGCACCAGGCCGCGGCCGCCGGCGACAAGCTGCTGCCATGGCGGACAATGTTCACCTCGGCCGGGTTCG
TGCCGGTGCACATAAGCAACTTCGCCGAGGCGCAGGCCGACTCGCTCCTGAAGAAGGTGCCGGTGAGGGGCTTCCGCGTG
GAGAAGCGCGCC---GGGTCGCTGGTCCTGCATTGGCAGCGCGCCGAGCTGGTGTCGGTGTCGGCATGGAGGTGCTGAAG
GAGCTGCCATGATGAACACAAGTCGGTAGGTTAGTTAGGACTAATGATCCTAACAAATGTTTCTGCTGCGACGATCAAAT
TACTCGCTAAGCATTTCGCCGCCACCTTGATGGATGTTCTGCTGATCATGTCACTTGTTTTGAGTAGATTGTTTGGCAGG
CTGCAAGGTCTGGTACAGTATCAATGTATTTTTAGTACTCATGTTACTATTTTCATGTGGAATCAAAATATGGTTATGGT
GTTTCAAATGTTCCATCAAAGCCGCTATTCGGCCCATTTATCTCGC---------TATTGGTTCGCTATTGGTTCAA---
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-----------------------TGTGAAATGAGGCATACAGTAAAAAAAAGT--------GAAGAAATAATATTCAGCT
CTGTTGGTGGTGATCGACTGGGAAAACAATATGCATTTAGTCAAAAAGATCAAGGCATTCAAATCTTCCAGGATCCGCCA
AATTGACAGCAAGCCAATATGATCAAATTTTCTTGAACTTGAATCAAAGAGTTCTTAAAAAAAAGTTGCTAGTAATTTAG
AAGTTTTATCTACATACGGGCGGATTATAGAAGATTTGTGTATTGCACTACTTGTCCATTTTCCTCAT---TTTTATTCA
CATGGGACTCTTTTTTGATTGAATTACAAGCTAGCAGGCTACATATAC-----TCTGTAATACCATATTTGCTCTGTTCG
ACTAAATGTAGCTCACTGTACTAGCAATGAAGGTATTTTCTGTAGGTAAATTTATGTTAGGCATCATACATGATCAGAAG
CTTTGGTTTTGCAGTGTATCATTTTCCCTGAAAGTTCTGAAATTGTTAGGAACACT
>chr1D_870
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-----------------------CGCTCCCGTTAAGCCGTCTTACCTTACCACTGCAAGAGAAGCAGATCACTCGGAGC-
--TCTTCTTCTTCTTCCTCCTGCTGCTGCTGTGGCGCGGCGATG------AGGTGAGTGAGCAGAGCTTGCCCGGGAGGG
GGATCGATGCCCACGCAGCAGCTCACGACATTCCAGCTGCTCCCGCCCGCTCACGCGCACGGCGACTGGCGACAGTACCA
GTACCACCACCACCACCACCACCAGGACC------------AGCAGCAGCAGCTCGCCTGCGGCGGCGGAGGAGGAGGCC
CGTGGGACCCCGCGTCGGTGCTCGACCGCCGGGCCAGCCCCGCCGCGCATCCCACGCTGTCTTCCCCCTCGCCCCTGCCC
GCCGGCGTGGCGGCCCTTGCCAAGAACGTCTCCGCGGCCCCGCCGGCGCAGGC------------ATGGCCACTCCCGCC
GGGCCCCGGGGCGAACGACGACGACGCCAAGGACGACTGGGTCCACCACCTGCCGCCCCTCGACATGGCCGGCTGGGGCG
ACCCGCACGCCGCCGCGATGCAGGAG---------------CCGCACCCGCCGCCCTCCTCGCAGGACAGCACCTTCCTC
CGCTGGATCATCGGCGGCGGGGACGACGAGGACGACGAC------TCCGGGG----------------------------
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>chr5D_870
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-----------------------CGCTCCCGTTAAGCCGTCTTACCTTACCACTGCAAGAGAAGCAGATCACTCGGAGC-
--TCTTCTTCTTCTTCCTCCTACTGCTGCTGTGGCGCGGCGATG------AGGTGAGTGAGCAGAGCTTGCCCGGGAGGG
GGGTCGATGCCCACGCAGCAGCTCACGACATTCCAGCTGCTCCCGCCCGCTCACGCGCACGGCGACCGGCGACAGTACCA
G------------------TACCAGCACCACCACCAGGA-----------------CCTGCGGCGGCGGAGGAGGAGGCC
TGTGGGACCCCGCGTCTGTGCTCGACCGCCGGGCCAGCCCCGCCGCGCATCCCACGCTGTCTTCCCCCTCGCCCCTGCCC
GCCGGCGTGGCGGCCCTCGCCAAGAACGTCTCCGCGGCCCCGCCGGCGCAGGC------------ATGGCCGCCCCCGCC
GGGCCCCGGGGCGAACGACGACGACACCAAGGACGACTGGGTCCACCACCTGCCGCCCCTCGACATGGTCGGCTGGGGCG
ACCCGCACGCCACCGCGATGCAGGAG---------------CCGCACCCGCCGCCCTCCTCGCAGGATAGCACCTTCCTC
CGCTGGATCATCGGCGGCGGGGACGACGAGGACGACGAC------TCCGGGG----------------------------
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>chr3D_870
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-----------------------CGCTCCCGTTAAGCCGTCTTACCTTACCACTTCAAGAGAAGCAGATCACTCGGAGC-
--TCTTCTTCTTCTTCCTCCTGCTGCTGCTGTGGCGCGGCGATG------TGGTGAGTGAGCAGAGCTTGCCCGGGAGGG
GGATCGATGCCCACGCAGCAGCTCACGACATTCCAGCTGCTCCCGCCCGCTCACGCGCACGGCGACCGGCGACAGTACCA
G------------------TACCAGCACCACCACCAGGAC------CAGCAGCTCGCCTGCGGCGGCGGCGGAGGAGGCC
TGTGGGACCCCGCGTCGGTGCTCGACCGCCGGGCCAGCCCCGCCGCGCATCCCACGCTGTCTTCCCCCTCGCCC-TGCCC
GCTGGCGTGGCGGCCCTCGCCAAGAACGTCTCCGCGGCCCCGCCGGCGCAGGC------------ATGGCCGCCCCCGCC
GGGCCCCGGGGCAAACGACGACGACGCCAAGGACGACTGGGTCCACCACCTGCCGCCCCTCGACATGGCCGGCTGGGGCG
ACCCGCACGCCGCCGCGATGCAGGAG---------------CCGCACCCGCCGCCCTCCTCGCAGGACCGCACCTTCCTC
CGCTGGATCATCGGCGGCGGGGACGACGAGGACGATGAC------TCCGGGG----------------------------
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>chr1A_1770
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--------------------------------------------------CCGCCCTCAAGCCCAAGGCGGGGACGGCGA
ACGACGA------GGCGGCCGCCACGGTGGACCAGCTCGCCGAGGCTGCCAAGTTTGCCGAGGCGGGCGACGCCTTCGGC
GCACGCGAGATATTGGCGCGGCTCAATTATCGGCTCCCCGCCGCCCCCGCGGCCGGGACGCCACTCCTCCGCTCTGCCTT
CTACTTCAAGGAGGCTTTGCGCCTCGCGCTCTCCCCCAACGGAGAGACGCCCGCGCCGCC------GGCGTCCACGCCCT
ACGACGTGGTCCTCAAGCTCGGCGCGTACAAGGCCTTCTCCGAGGTCTCCCCGGTGCTCCAGTTCGCGCACCTCACCTGC
GTCCAGGCGGTGCTCGACGGGCTCCGCGGCGCAGGCTGCATCCACGTGCTCGACTTCGACATCGGCATGGGCGAGCAGTG
GGCGTCGCTGATGCAGGAGCTCGCGCAGCGCCGCCCGGCGACGGCGCTCAAGGTCACCGCATTGGTCTCGCCGGCGTCGC
ACCACCCGCTCGAGCTGCAGCTCATCCACGAGAACCTCTCAAGCTTCGCCGCCGAGCTCGGCGTGTTCTTCCAGTTCACC
GTATTCAACATCGACACCCTCGACCCCGCGGACCTGGTGGCCATCGCCGGCGGGGACGCGCTCGCCGTCCACCTGCCCGT
CGGCGCAGCACACGCGGCCGCAATGCCCGCCGTCCTCCGCCTCGTGAAGAGCCTCGGCGCCAAGGTGGTCGTGTCCGTGG
ACCGCGGGTGCGACCGCACGGAGCTGCCCTTCGCCGCGCACCTGTTCCAGGCGTTCCAGTCCACCGTCTTCCTCCTCGAG
TCCGTGGACGCCGTGGGCACCGACCCCGACACGGCCGGCAAGATCGAGCGGTTCCTGGTCCAGCCGGCCGTGGAGCAATG
CGTGGTCGGGCGCCACCGCGCGTCCATCGAGAAGGC---GCCGCTGCCGTGGCGGGCCGTGTTCGCGTCGGCCGGGTTCA
CGCCGGTGCAGGCCAGCACGTTCGCGGAGTCGCAGGCCGAGTCGCTGCTGCACAAGGTGCCCGTCCGGGGGTTCCGCGTC
GAGAAGCGCGCCCCGGGATCGCTCTGCCTCTACTGGCAGCGCGCCGAGCTCGTGTCGGTCTCGGCGTGGCGGTGCTGA--
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>chr1B_1770
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--------------------------------------------------CCGCCCTGAAGCCCAAGGCGGGGACAGCGA
ACGACGA------GGCGGCCGCCACGGTGGACCAGCTCGCCGAGGCTGCCAAGTTTGCCGAGGCGGGCGACGCCTTCGGC
GCACGCGAGATATTGGCGCGGCTCAATTATCGGCTCCCCGCCGCCCCCGCGGCCGGGACGCCACTCCTCCGCTCTGCCTT
CTACTTCAAGGAGGCTTTGCGCCTTGCGCTCTCCCCAAACGGAGAGACGCCCGCGCCGCC------GGCGTCCACGCCGT
ACGACGTGGTCCTCAAGCTCGGCGCGTACAAGGCCTTCTCCGAGGTCTCCCCGGTGCTCCAGTTCGCGCACCTCACCTGC
GTCCAGGCGGTGCTCGACGGGCTCCGCGGCGCAGGCTGCATCCACGTGCTCGACTTCGACATCGGCATGGGCGAGCAGTG
GGCGTCGCTGATGCAGGAGCTCGCGCAGCGCCGCCCGGCGACGGCGCTCAAGGTCACCGCATTGGTCTCGCCGGCGTCGC
ACCACCCGCTCGAGCTGCAGCTCATCCACGAGAACCTATCCAGCTTCGCCGCGGAGCTCGGCGTGTTCTTCCAGTTCACC
GTATTCAACATCGACACCCTCGACCCCGCGGAGCTCGTGGCCATCGCCGGCGGGGACGCGCTCGCCGTCCACCTCCCCGT
CGGCGCAGCACACGCGGCCGCAATGCCCGCCGTCCTCCGCCTCGTGAAGAGCCTCGGCGCCAAGGTGGTCGTGTCCGTGG
ACCGCGGGTGCGACCGCACGGAGCTGCCCTTCGCCGCCCACCTGTTCCAGGCGTTCCAGTCCACCGTGTTCCTCCTTGAG
TCCGTGGACGCCGTGGGCACGGACCCGGACACGGCCGGCAAGATCGAGCGGTTCCTGGTCCAGCCGGCCGTGGAGCAATG
GGTGGTCGGGCGCCACCGCGCGTCCATCGAGAAGGC---GCCGCTGCCGTGGCGGGCCGTGTTCGCGTCGGCCGGGTTCA
CGCCGGTGCAGGCCAGCACGTTCGCGGAGTCGCAGGCCGAGTCGCTGCTGCACAAGGTGCCCGTCCGGGGGTTCCGCGTC
GAGAAGCGCGCCCCGGGATCGCTCTGCCTCTACTGGCAGCGCGCCGAGCTCGTGTCAGTCTCGGCGTGGCGGTGCTGA--
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>chr1D_1770
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--------------------------------------------------CCGCCCTGAAGCCCAAGGCGGGGACAGCGA
ACGACGA------GGCGGCCGCCACGGTGGACCAGCTCGCCGAGGCTGCCAAGTTTGCCGAGGCGGGCGACGCCTTCGGC
GCACGCGAGATATTGGCGCGGCTCAATTATCGGCTCCCCGCCGCCCCCGCGGCCGGGACGCCACTCCTCCGCTCTGCCTT
CTACTTCAAGGAGGCTTTGCGCCTTGCGCTCTCCCCCAACGGAGAGACGCCCGCGCCGCC------GGCGTCCACGCCGT
ACGACGTGGTCCTCAAGCTCGGCGCGTACAAGGCCTTCTCCGAGGTCTCCCCGGTGCTCCAGTTCGCGCACCTCACCTGC
GTCCAGGCGGTGCTCGACGGGCTCCGCGGCGCAGGCTGCATCCACGTGCTCGACTTCGACATCGGCATGGGCGAGCAGTG
GGCGTCGCTGATGCAGGAGCTCGCGCAGCGCCGCCCGGCAACGGCGCTCAAGGTCACCGCATTGGTCTCGCCGGCGTCGC
ACCACCCGCTCGAGCTGCAGCTCATCCACGAGAACCTCTCCAGCTTCGCCGCCGAGCTCGGCGTGTTCTTCCAGTTCACC
GTCTTCAACATCGACACCCTCGATCCCGCGGACCTGGTGGCAATCGCTGGCGGCGACGCCCTTGCCGTCCACCTCCCCGT
CGGCGCCGCACACGCGGCAGCAATGCCCGCCGTCCTCCGCCTCGTGAAGAGCCTCGGCGCCAAGGTGGTCGTGTCCGTGG
ACCGCGGGTGCGACCGCACGGAGCTGCCCTTCGCCGCCCACCTGTTCCAGGCGTTCCAGTCCACCGTGTTCCTCCTCGAG
TCCGTGGACGCCGTGGGCACGGACCCGGACACGGCCGGCAAGATCGAGCGGTTCCTGGTCCAGCCGGCCGTGGAGCAATG
CGTGGTCGGGCGCCACCGCGCGTCCATCGAGAAGGC---GCCGCTGCCGTGGCGGGCCGTGTTCGCGTCGGCCGGGTTCA
CGCCGGTGCAGGCCAGCACGTTCGCGGAGTCGCAGGCCGAGTCGCTGCTGCACAAGGTGCCCGTGCGGGGGTTCCGCGTC
GAGAAGCGCGCCCCGGGCTCGCTCTGCCTCTACTGGCAACGCGCCGAGCTCGTGTCAGTCTCGGCGTGGCGGTGCTGA--
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------------------------SSS-SSSSSSSS---
-------S--------S-S----S-S---------------SS--SS-SSS-SSSSSS----------------------
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--S--------SSSS------------------------------S-S--------------------------------
--S-SSSSSS-S--S-----S-S-----S--S-SS----SS------------SS---------------S---------
------------------S---------------------------------------------------S---------
--------------------------------------------------------------------------------
----------------------S---------------------------S--------------S--------------
-------S-------------------------------------------------------S----------S-S---
-----S--------------------------------------------------------------S----S-S----
------------------------------------------S--S----------------------------------
-S------------------------------------------------------------------------------
-----------------------------------------------------------SSS-S----------------
------------S--------------------------------------S----------------------------
----------------S--------------------------S------------------------------------
------------------------------------------------------------------S-------------
--------------------------------------------SSS---------------------------------
---------------------------SS------S--------------------------------------------
--------------------------------------------------S-SSSS------------------------
------------------------------------------------S-------------------------------
S-------------------------------------------------------------------------------
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--------------------S--------------------------------------------S--------------
---------------S-----------S--------------------------S-------------------------
-------------------------------------------------------------S------------------
--------------------------------------------------------------------------------
------S-------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------S------------------------
-----------------S--------------------------------------------------------------
-----------------------------------S--------------------------------------------
----------------S---------------------------------------------------------------
---------S------------------------------------SSSSSSSSS----------------------S-S
-------------S-----------------------S------------------S-----------------------
---SSS--------S--------SS-----------------------S--------SS------S---------S----
--------------S--------------------------------------S-----------------S--------
-------------------------------------S---------------SS----------S--------------
-----------------------------------------------------S--------------------------
-----------------S--------------------------S--------------------SS-SSS--------S
--------------SS------S--------------SSSSSSSSSSSSSSSS---S----S------------------
-----S--------------S--S--------------------------------------------------------
-----------------S-----------------------------SS-------
>forward_183
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---ACGTTGTCCCGATTTCTCCC---------------------------------------------------------
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>reverse_2577
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----------------CATGCAGGAGCCTCACCC----------------------------------------------
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>forward_1781
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-CTGCCTGCTTTGCTTAACGG-----------------------------------------------------------
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>reverse_3735
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------------------------------------------------------GGGCGCCAAGCTTGTCATC-------
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>forward_3621
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-TGTTCAACCTCGACTCCGTG-----------------------------------------------------------
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>reverse_4636
--------------------------------------------------------------------------------
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---------------------------------------------------------------------------GTGTT
CTCGAAATGCTTGCGT----------------------------------------------------------------
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--------------------------------------------------------
