Multiple sequence alignment - TraesCS5A01G532900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G532900 chr5A 100.000 2611 0 0 1 2611 690359079 690356469 0.000000e+00 4822.0
1 TraesCS5A01G532900 chr5A 90.619 1098 61 26 605 1684 385383878 385382805 0.000000e+00 1419.0
2 TraesCS5A01G532900 chr5A 92.357 471 29 3 1682 2151 385382672 385382208 0.000000e+00 664.0
3 TraesCS5A01G532900 chr5A 88.107 412 37 6 2201 2611 385382218 385381818 1.820000e-131 479.0
4 TraesCS5A01G532900 chr5A 74.359 351 71 15 1794 2134 404016764 404017105 5.860000e-27 132.0
5 TraesCS5A01G532900 chr5A 85.965 57 6 2 2041 2096 584717401 584717456 2.810000e-05 60.2
6 TraesCS5A01G532900 chr5B 87.956 1179 80 23 523 1684 333197126 333195993 0.000000e+00 1334.0
7 TraesCS5A01G532900 chr5B 93.432 472 25 2 1682 2152 333195860 333195394 0.000000e+00 695.0
8 TraesCS5A01G532900 chr5B 88.078 411 37 6 2201 2611 333195405 333195007 6.540000e-131 477.0
9 TraesCS5A01G532900 chr5B 74.448 317 65 13 1791 2097 356359719 356360029 3.530000e-24 122.0
10 TraesCS5A01G532900 chr5B 85.965 57 6 2 2041 2096 571481121 571481176 2.810000e-05 60.2
11 TraesCS5A01G532900 chr5D 89.610 1078 71 17 607 1682 292641636 292640598 0.000000e+00 1332.0
12 TraesCS5A01G532900 chr5D 91.949 472 35 2 1682 2152 292640463 292639994 0.000000e+00 658.0
13 TraesCS5A01G532900 chr5D 90.821 414 27 2 2198 2611 292640008 292639606 6.360000e-151 544.0
14 TraesCS5A01G532900 chr5D 90.566 265 24 1 264 528 543670712 543670975 1.490000e-92 350.0
15 TraesCS5A01G532900 chr5D 72.235 443 91 25 1712 2134 310497591 310498021 9.880000e-20 108.0
16 TraesCS5A01G532900 chr5D 83.582 67 9 2 2041 2106 464325816 464325881 7.800000e-06 62.1
17 TraesCS5A01G532900 chr4B 90.931 838 30 23 863 1683 652915857 652915049 0.000000e+00 1085.0
18 TraesCS5A01G532900 chr4B 95.127 472 20 3 1682 2152 652914915 652914446 0.000000e+00 741.0
19 TraesCS5A01G532900 chr4B 89.573 422 30 3 2196 2610 652914462 652914048 8.280000e-145 523.0
20 TraesCS5A01G532900 chr4B 86.424 302 20 10 522 810 652916364 652916071 7.020000e-81 311.0
21 TraesCS5A01G532900 chr4B 85.276 163 8 6 666 816 652916033 652915875 1.250000e-33 154.0
22 TraesCS5A01G532900 chr4B 94.737 38 2 0 2 39 406331221 406331184 2.810000e-05 60.2
23 TraesCS5A01G532900 chr4B 97.143 35 1 0 2 36 644563819 644563853 2.810000e-05 60.2
24 TraesCS5A01G532900 chrUn 89.150 765 23 16 935 1684 127007104 127007823 0.000000e+00 898.0
25 TraesCS5A01G532900 chrUn 93.394 439 16 3 522 948 127006526 127006963 2.830000e-179 638.0
26 TraesCS5A01G532900 chrUn 90.643 171 5 1 1982 2152 127007958 127008117 1.570000e-52 217.0
27 TraesCS5A01G532900 chrUn 93.023 129 5 1 2483 2611 127008138 127008262 4.440000e-43 185.0
28 TraesCS5A01G532900 chrUn 100.000 41 0 0 2196 2236 127008101 127008141 2.790000e-10 76.8
29 TraesCS5A01G532900 chrUn 97.368 38 1 0 2069 2106 37409967 37410004 6.030000e-07 65.8
30 TraesCS5A01G532900 chr2A 92.308 260 20 0 269 528 729555245 729554986 1.140000e-98 370.0
31 TraesCS5A01G532900 chr3D 91.698 265 22 0 264 528 590751749 590752013 4.110000e-98 368.0
32 TraesCS5A01G532900 chr3B 91.221 262 23 0 267 528 64503817 64504078 8.890000e-95 357.0
33 TraesCS5A01G532900 chr1B 90.909 264 24 0 265 528 12756842 12757105 3.200000e-94 355.0
34 TraesCS5A01G532900 chr6B 91.406 256 21 1 265 519 697927451 697927706 1.490000e-92 350.0
35 TraesCS5A01G532900 chr2B 90.566 265 24 1 265 528 33847657 33847393 1.490000e-92 350.0
36 TraesCS5A01G532900 chr2B 90.840 262 23 1 267 528 745694729 745694989 1.490000e-92 350.0
37 TraesCS5A01G532900 chr2B 94.737 38 2 0 2 39 607219345 607219308 2.810000e-05 60.2
38 TraesCS5A01G532900 chr3A 89.455 275 26 3 255 528 547381314 547381042 6.920000e-91 344.0
39 TraesCS5A01G532900 chr1A 97.436 39 1 0 1 39 359975368 359975330 1.680000e-07 67.6
40 TraesCS5A01G532900 chr4D 100.000 31 0 0 1 31 212170607 212170577 1.010000e-04 58.4
41 TraesCS5A01G532900 chr4D 97.059 34 1 0 1 34 463346896 463346863 1.010000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G532900 chr5A 690356469 690359079 2610 True 4822.000000 4822 100.000000 1 2611 1 chr5A.!!$R1 2610
1 TraesCS5A01G532900 chr5A 385381818 385383878 2060 True 854.000000 1419 90.361000 605 2611 3 chr5A.!!$R2 2006
2 TraesCS5A01G532900 chr5B 333195007 333197126 2119 True 835.333333 1334 89.822000 523 2611 3 chr5B.!!$R1 2088
3 TraesCS5A01G532900 chr5D 292639606 292641636 2030 True 844.666667 1332 90.793333 607 2611 3 chr5D.!!$R1 2004
4 TraesCS5A01G532900 chr4B 652914048 652916364 2316 True 562.800000 1085 89.466200 522 2610 5 chr4B.!!$R2 2088
5 TraesCS5A01G532900 chrUn 127006526 127008262 1736 False 402.960000 898 93.242000 522 2611 5 chrUn.!!$F2 2089

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
376 377 0.033601 ATGAGCACCTCCGAGAGACT 60.034 55.0 0.0 0.0 0.0 3.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2031 2592 0.804364 CGCTCTGGTGCTGCAAAATA 59.196 50.0 2.77 0.0 0.0 1.4 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 9.569122 TTATTTTAACTGACCAAGCTTTAGACT 57.431 29.630 0.00 0.00 0.00 3.24
31 32 7.492352 TTTTAACTGACCAAGCTTTAGACTC 57.508 36.000 0.00 0.00 0.00 3.36
32 33 4.965200 AACTGACCAAGCTTTAGACTCT 57.035 40.909 0.00 0.00 0.00 3.24
33 34 4.529109 ACTGACCAAGCTTTAGACTCTC 57.471 45.455 0.00 0.00 0.00 3.20
34 35 4.156477 ACTGACCAAGCTTTAGACTCTCT 58.844 43.478 0.00 0.00 0.00 3.10
35 36 5.326069 ACTGACCAAGCTTTAGACTCTCTA 58.674 41.667 0.00 0.00 0.00 2.43
36 37 5.417580 ACTGACCAAGCTTTAGACTCTCTAG 59.582 44.000 0.00 0.00 29.56 2.43
37 38 5.326069 TGACCAAGCTTTAGACTCTCTAGT 58.674 41.667 0.00 0.00 39.21 2.57
38 39 5.775701 TGACCAAGCTTTAGACTCTCTAGTT 59.224 40.000 0.00 0.00 35.56 2.24
39 40 6.267928 TGACCAAGCTTTAGACTCTCTAGTTT 59.732 38.462 0.00 0.00 35.56 2.66
40 41 7.068686 ACCAAGCTTTAGACTCTCTAGTTTT 57.931 36.000 0.00 0.00 35.56 2.43
41 42 7.156000 ACCAAGCTTTAGACTCTCTAGTTTTC 58.844 38.462 0.00 0.00 35.56 2.29
42 43 7.015779 ACCAAGCTTTAGACTCTCTAGTTTTCT 59.984 37.037 0.00 0.00 35.56 2.52
43 44 7.875554 CCAAGCTTTAGACTCTCTAGTTTTCTT 59.124 37.037 0.00 0.00 35.56 2.52
44 45 9.267084 CAAGCTTTAGACTCTCTAGTTTTCTTT 57.733 33.333 0.00 0.00 35.56 2.52
45 46 9.839817 AAGCTTTAGACTCTCTAGTTTTCTTTT 57.160 29.630 0.00 0.00 35.56 2.27
46 47 9.839817 AGCTTTAGACTCTCTAGTTTTCTTTTT 57.160 29.630 0.00 0.00 35.56 1.94
72 73 6.877611 TTTTTGCGGAAATTTAGACTCTCT 57.122 33.333 1.94 0.00 0.00 3.10
73 74 7.972832 TTTTTGCGGAAATTTAGACTCTCTA 57.027 32.000 1.94 0.00 0.00 2.43
74 75 7.596749 TTTTGCGGAAATTTAGACTCTCTAG 57.403 36.000 1.94 0.00 29.56 2.43
75 76 5.916661 TGCGGAAATTTAGACTCTCTAGT 57.083 39.130 0.00 0.00 39.21 2.57
76 77 6.282199 TGCGGAAATTTAGACTCTCTAGTT 57.718 37.500 0.00 0.00 35.56 2.24
77 78 6.100004 TGCGGAAATTTAGACTCTCTAGTTG 58.900 40.000 0.00 0.00 35.56 3.16
78 79 6.071560 TGCGGAAATTTAGACTCTCTAGTTGA 60.072 38.462 0.00 0.00 35.56 3.18
79 80 6.981559 GCGGAAATTTAGACTCTCTAGTTGAT 59.018 38.462 0.00 0.00 35.56 2.57
80 81 7.492994 GCGGAAATTTAGACTCTCTAGTTGATT 59.507 37.037 0.00 0.00 35.56 2.57
81 82 9.372369 CGGAAATTTAGACTCTCTAGTTGATTT 57.628 33.333 0.00 0.00 35.56 2.17
88 89 7.710676 AGACTCTCTAGTTGATTTAGCTTCA 57.289 36.000 0.00 0.00 35.56 3.02
89 90 7.771183 AGACTCTCTAGTTGATTTAGCTTCAG 58.229 38.462 0.00 0.00 35.56 3.02
90 91 7.396055 AGACTCTCTAGTTGATTTAGCTTCAGT 59.604 37.037 0.00 0.00 35.56 3.41
91 92 7.319646 ACTCTCTAGTTGATTTAGCTTCAGTG 58.680 38.462 0.00 0.00 29.00 3.66
92 93 7.039363 ACTCTCTAGTTGATTTAGCTTCAGTGT 60.039 37.037 0.00 0.00 29.00 3.55
93 94 8.349568 TCTCTAGTTGATTTAGCTTCAGTGTA 57.650 34.615 0.00 0.00 0.00 2.90
94 95 8.244802 TCTCTAGTTGATTTAGCTTCAGTGTAC 58.755 37.037 0.00 0.00 0.00 2.90
95 96 7.027760 TCTAGTTGATTTAGCTTCAGTGTACG 58.972 38.462 0.00 0.00 0.00 3.67
96 97 5.779922 AGTTGATTTAGCTTCAGTGTACGA 58.220 37.500 0.00 0.00 0.00 3.43
97 98 5.864474 AGTTGATTTAGCTTCAGTGTACGAG 59.136 40.000 0.00 0.00 0.00 4.18
98 99 5.386958 TGATTTAGCTTCAGTGTACGAGT 57.613 39.130 0.00 0.00 0.00 4.18
99 100 6.505044 TGATTTAGCTTCAGTGTACGAGTA 57.495 37.500 0.00 0.00 0.00 2.59
100 101 6.320171 TGATTTAGCTTCAGTGTACGAGTAC 58.680 40.000 6.46 6.46 36.63 2.73
101 102 5.694231 TTTAGCTTCAGTGTACGAGTACA 57.306 39.130 11.61 11.61 43.14 2.90
102 103 5.694231 TTAGCTTCAGTGTACGAGTACAA 57.306 39.130 16.53 0.42 46.33 2.41
103 104 4.162096 AGCTTCAGTGTACGAGTACAAG 57.838 45.455 16.53 11.71 46.33 3.16
104 105 3.819337 AGCTTCAGTGTACGAGTACAAGA 59.181 43.478 16.53 14.31 46.33 3.02
105 106 3.913163 GCTTCAGTGTACGAGTACAAGAC 59.087 47.826 16.53 6.11 46.33 3.01
106 107 4.320348 GCTTCAGTGTACGAGTACAAGACT 60.320 45.833 16.53 8.11 46.33 3.24
107 108 4.744136 TCAGTGTACGAGTACAAGACTG 57.256 45.455 16.53 17.71 46.33 3.51
108 109 4.383173 TCAGTGTACGAGTACAAGACTGA 58.617 43.478 21.15 21.15 46.33 3.41
109 110 5.001874 TCAGTGTACGAGTACAAGACTGAT 58.998 41.667 21.15 3.55 46.33 2.90
110 111 5.472478 TCAGTGTACGAGTACAAGACTGATT 59.528 40.000 21.15 2.36 46.33 2.57
111 112 6.652062 TCAGTGTACGAGTACAAGACTGATTA 59.348 38.462 21.15 8.53 46.33 1.75
112 113 6.741811 CAGTGTACGAGTACAAGACTGATTAC 59.258 42.308 19.28 6.13 46.33 1.89
113 114 6.429078 AGTGTACGAGTACAAGACTGATTACA 59.571 38.462 16.53 0.00 46.33 2.41
114 115 7.120873 AGTGTACGAGTACAAGACTGATTACAT 59.879 37.037 16.53 0.00 46.33 2.29
115 116 7.218393 GTGTACGAGTACAAGACTGATTACATG 59.782 40.741 16.53 0.00 46.33 3.21
116 117 5.651530 ACGAGTACAAGACTGATTACATGG 58.348 41.667 0.00 0.00 39.06 3.66
117 118 5.185249 ACGAGTACAAGACTGATTACATGGT 59.815 40.000 0.00 0.00 39.06 3.55
118 119 6.376299 ACGAGTACAAGACTGATTACATGGTA 59.624 38.462 0.00 0.00 39.06 3.25
119 120 7.094075 ACGAGTACAAGACTGATTACATGGTAA 60.094 37.037 0.00 0.00 39.06 2.85
120 121 7.220300 CGAGTACAAGACTGATTACATGGTAAC 59.780 40.741 0.00 0.00 39.06 2.50
121 122 7.903145 AGTACAAGACTGATTACATGGTAACA 58.097 34.615 0.00 0.00 45.64 2.41
122 123 8.035394 AGTACAAGACTGATTACATGGTAACAG 58.965 37.037 0.00 4.31 44.95 3.16
155 156 9.612066 AAGGCCAAATACCAAATATATTTTGTG 57.388 29.630 19.93 10.07 31.33 3.33
156 157 7.714813 AGGCCAAATACCAAATATATTTTGTGC 59.285 33.333 19.93 15.01 31.33 4.57
157 158 7.714813 GGCCAAATACCAAATATATTTTGTGCT 59.285 33.333 19.93 8.54 31.33 4.40
158 159 9.757227 GCCAAATACCAAATATATTTTGTGCTA 57.243 29.630 19.93 5.77 31.33 3.49
170 171 7.766219 ATATTTTGTGCTAACGTAGTACTGG 57.234 36.000 5.39 0.00 45.00 4.00
171 172 2.642139 TGTGCTAACGTAGTACTGGC 57.358 50.000 5.39 0.00 45.00 4.85
172 173 2.165167 TGTGCTAACGTAGTACTGGCT 58.835 47.619 5.39 0.00 45.00 4.75
173 174 2.559668 TGTGCTAACGTAGTACTGGCTT 59.440 45.455 5.39 0.00 45.00 4.35
174 175 3.177487 GTGCTAACGTAGTACTGGCTTC 58.823 50.000 5.39 0.00 45.00 3.86
175 176 3.087031 TGCTAACGTAGTACTGGCTTCT 58.913 45.455 5.39 0.00 45.00 2.85
176 177 3.508793 TGCTAACGTAGTACTGGCTTCTT 59.491 43.478 5.39 0.00 45.00 2.52
177 178 4.104066 GCTAACGTAGTACTGGCTTCTTC 58.896 47.826 5.39 0.00 45.00 2.87
178 179 4.142425 GCTAACGTAGTACTGGCTTCTTCT 60.142 45.833 5.39 0.00 45.00 2.85
179 180 4.868314 AACGTAGTACTGGCTTCTTCTT 57.132 40.909 5.39 0.00 45.00 2.52
180 181 4.175787 ACGTAGTACTGGCTTCTTCTTG 57.824 45.455 5.39 0.00 41.94 3.02
181 182 3.056749 ACGTAGTACTGGCTTCTTCTTGG 60.057 47.826 5.39 0.00 41.94 3.61
182 183 2.481289 AGTACTGGCTTCTTCTTGGC 57.519 50.000 0.00 0.00 0.00 4.52
183 184 1.981495 AGTACTGGCTTCTTCTTGGCT 59.019 47.619 0.00 0.00 0.00 4.75
184 185 2.079925 GTACTGGCTTCTTCTTGGCTG 58.920 52.381 0.00 0.00 0.00 4.85
185 186 0.892814 ACTGGCTTCTTCTTGGCTGC 60.893 55.000 0.00 0.00 0.00 5.25
186 187 1.593296 CTGGCTTCTTCTTGGCTGCC 61.593 60.000 12.87 12.87 40.62 4.85
187 188 1.604593 GGCTTCTTCTTGGCTGCCA 60.605 57.895 19.30 19.30 40.04 4.92
188 189 0.969409 GGCTTCTTCTTGGCTGCCAT 60.969 55.000 24.03 0.00 40.04 4.40
189 190 0.893447 GCTTCTTCTTGGCTGCCATT 59.107 50.000 24.03 0.00 31.53 3.16
190 191 1.274447 GCTTCTTCTTGGCTGCCATTT 59.726 47.619 24.03 0.00 31.53 2.32
191 192 2.289257 GCTTCTTCTTGGCTGCCATTTT 60.289 45.455 24.03 0.00 31.53 1.82
192 193 3.056607 GCTTCTTCTTGGCTGCCATTTTA 60.057 43.478 24.03 6.39 31.53 1.52
193 194 4.382362 GCTTCTTCTTGGCTGCCATTTTAT 60.382 41.667 24.03 0.00 31.53 1.40
194 195 5.727434 CTTCTTCTTGGCTGCCATTTTATT 58.273 37.500 24.03 0.00 31.53 1.40
195 196 5.075858 TCTTCTTGGCTGCCATTTTATTG 57.924 39.130 24.03 9.34 31.53 1.90
196 197 4.527816 TCTTCTTGGCTGCCATTTTATTGT 59.472 37.500 24.03 0.00 31.53 2.71
197 198 4.191033 TCTTGGCTGCCATTTTATTGTG 57.809 40.909 24.03 4.78 31.53 3.33
198 199 3.577848 TCTTGGCTGCCATTTTATTGTGT 59.422 39.130 24.03 0.00 31.53 3.72
199 200 3.316071 TGGCTGCCATTTTATTGTGTG 57.684 42.857 19.30 0.00 0.00 3.82
200 201 2.632028 TGGCTGCCATTTTATTGTGTGT 59.368 40.909 19.30 0.00 0.00 3.72
201 202 3.070734 TGGCTGCCATTTTATTGTGTGTT 59.929 39.130 19.30 0.00 0.00 3.32
202 203 3.432933 GGCTGCCATTTTATTGTGTGTTG 59.567 43.478 15.17 0.00 0.00 3.33
203 204 3.432933 GCTGCCATTTTATTGTGTGTTGG 59.567 43.478 0.00 0.00 0.00 3.77
204 205 4.798924 GCTGCCATTTTATTGTGTGTTGGA 60.799 41.667 0.00 0.00 0.00 3.53
205 206 4.880759 TGCCATTTTATTGTGTGTTGGAG 58.119 39.130 0.00 0.00 0.00 3.86
206 207 3.679502 GCCATTTTATTGTGTGTTGGAGC 59.320 43.478 0.00 0.00 0.00 4.70
207 208 4.561326 GCCATTTTATTGTGTGTTGGAGCT 60.561 41.667 0.00 0.00 0.00 4.09
208 209 5.540911 CCATTTTATTGTGTGTTGGAGCTT 58.459 37.500 0.00 0.00 0.00 3.74
209 210 5.990996 CCATTTTATTGTGTGTTGGAGCTTT 59.009 36.000 0.00 0.00 0.00 3.51
210 211 6.482973 CCATTTTATTGTGTGTTGGAGCTTTT 59.517 34.615 0.00 0.00 0.00 2.27
211 212 7.012232 CCATTTTATTGTGTGTTGGAGCTTTTT 59.988 33.333 0.00 0.00 0.00 1.94
232 233 6.497624 TTTTTAAGTACACCACTACAGGGA 57.502 37.500 0.00 0.00 36.04 4.20
233 234 5.733620 TTTAAGTACACCACTACAGGGAG 57.266 43.478 0.00 0.00 36.04 4.30
234 235 3.537795 AAGTACACCACTACAGGGAGA 57.462 47.619 0.00 0.00 36.04 3.71
235 236 3.537795 AGTACACCACTACAGGGAGAA 57.462 47.619 0.00 0.00 34.98 2.87
236 237 3.853207 AGTACACCACTACAGGGAGAAA 58.147 45.455 0.00 0.00 34.98 2.52
237 238 3.577415 AGTACACCACTACAGGGAGAAAC 59.423 47.826 0.00 0.00 34.98 2.78
238 239 1.697982 ACACCACTACAGGGAGAAACC 59.302 52.381 0.00 0.00 38.08 3.27
239 240 1.697432 CACCACTACAGGGAGAAACCA 59.303 52.381 0.00 0.00 41.20 3.67
240 241 2.105821 CACCACTACAGGGAGAAACCAA 59.894 50.000 0.00 0.00 41.20 3.67
241 242 2.372172 ACCACTACAGGGAGAAACCAAG 59.628 50.000 0.00 0.00 41.20 3.61
242 243 2.637872 CCACTACAGGGAGAAACCAAGA 59.362 50.000 0.00 0.00 41.20 3.02
243 244 3.264450 CCACTACAGGGAGAAACCAAGAT 59.736 47.826 0.00 0.00 41.20 2.40
244 245 4.469945 CCACTACAGGGAGAAACCAAGATA 59.530 45.833 0.00 0.00 41.20 1.98
245 246 5.131142 CCACTACAGGGAGAAACCAAGATAT 59.869 44.000 0.00 0.00 41.20 1.63
246 247 6.051717 CACTACAGGGAGAAACCAAGATATG 58.948 44.000 0.00 0.00 41.20 1.78
247 248 5.726793 ACTACAGGGAGAAACCAAGATATGT 59.273 40.000 0.00 0.00 41.20 2.29
248 249 5.520748 ACAGGGAGAAACCAAGATATGTT 57.479 39.130 0.00 0.00 41.20 2.71
249 250 5.256474 ACAGGGAGAAACCAAGATATGTTG 58.744 41.667 5.62 5.62 41.20 3.33
250 251 4.096984 CAGGGAGAAACCAAGATATGTTGC 59.903 45.833 7.07 0.00 41.20 4.17
251 252 4.018050 AGGGAGAAACCAAGATATGTTGCT 60.018 41.667 7.07 0.00 41.20 3.91
252 253 4.706962 GGGAGAAACCAAGATATGTTGCTT 59.293 41.667 7.07 2.97 41.20 3.91
253 254 5.163612 GGGAGAAACCAAGATATGTTGCTTC 60.164 44.000 7.07 11.00 41.20 3.86
254 255 5.415701 GGAGAAACCAAGATATGTTGCTTCA 59.584 40.000 19.20 0.00 38.79 3.02
255 256 6.071952 GGAGAAACCAAGATATGTTGCTTCAA 60.072 38.462 19.20 0.00 38.79 2.69
256 257 7.288810 AGAAACCAAGATATGTTGCTTCAAA 57.711 32.000 19.20 0.00 24.94 2.69
257 258 7.899973 AGAAACCAAGATATGTTGCTTCAAAT 58.100 30.769 19.20 5.14 24.94 2.32
258 259 7.816031 AGAAACCAAGATATGTTGCTTCAAATG 59.184 33.333 19.20 4.84 24.94 2.32
259 260 5.969423 ACCAAGATATGTTGCTTCAAATGG 58.031 37.500 7.07 0.00 0.00 3.16
260 261 5.481473 ACCAAGATATGTTGCTTCAAATGGT 59.519 36.000 7.07 0.00 0.00 3.55
261 262 6.014327 ACCAAGATATGTTGCTTCAAATGGTT 60.014 34.615 7.07 0.00 0.00 3.67
262 263 7.178274 ACCAAGATATGTTGCTTCAAATGGTTA 59.822 33.333 7.07 0.00 0.00 2.85
263 264 7.703621 CCAAGATATGTTGCTTCAAATGGTTAG 59.296 37.037 7.07 0.00 0.00 2.34
264 265 7.338800 AGATATGTTGCTTCAAATGGTTAGG 57.661 36.000 0.00 0.00 0.00 2.69
265 266 6.891908 AGATATGTTGCTTCAAATGGTTAGGT 59.108 34.615 0.00 0.00 0.00 3.08
266 267 5.806654 ATGTTGCTTCAAATGGTTAGGTT 57.193 34.783 0.00 0.00 0.00 3.50
267 268 5.606348 TGTTGCTTCAAATGGTTAGGTTT 57.394 34.783 0.00 0.00 0.00 3.27
268 269 5.983540 TGTTGCTTCAAATGGTTAGGTTTT 58.016 33.333 0.00 0.00 0.00 2.43
269 270 6.410540 TGTTGCTTCAAATGGTTAGGTTTTT 58.589 32.000 0.00 0.00 0.00 1.94
294 295 6.561737 TTTTTGAATATTGGTACAGACGCA 57.438 33.333 0.00 0.00 42.39 5.24
295 296 6.561737 TTTTGAATATTGGTACAGACGCAA 57.438 33.333 0.00 0.00 42.39 4.85
296 297 5.794687 TTGAATATTGGTACAGACGCAAG 57.205 39.130 0.00 0.00 42.39 4.01
297 298 3.621268 TGAATATTGGTACAGACGCAAGC 59.379 43.478 0.00 0.00 42.39 4.01
298 299 1.635844 TATTGGTACAGACGCAAGCG 58.364 50.000 13.50 13.50 42.39 4.68
299 300 1.635663 ATTGGTACAGACGCAAGCGC 61.636 55.000 15.09 0.00 42.39 5.92
300 301 2.432628 GGTACAGACGCAAGCGCT 60.433 61.111 15.09 2.64 44.19 5.92
301 302 2.445438 GGTACAGACGCAAGCGCTC 61.445 63.158 12.06 11.06 44.19 5.03
302 303 1.733041 GTACAGACGCAAGCGCTCA 60.733 57.895 12.06 0.83 44.19 4.26
303 304 1.078759 GTACAGACGCAAGCGCTCAT 61.079 55.000 12.06 0.00 44.19 2.90
304 305 0.454196 TACAGACGCAAGCGCTCATA 59.546 50.000 12.06 5.16 44.19 2.15
305 306 1.078759 ACAGACGCAAGCGCTCATAC 61.079 55.000 12.06 1.58 44.19 2.39
306 307 1.078201 CAGACGCAAGCGCTCATACA 61.078 55.000 12.06 0.00 44.19 2.29
307 308 0.179100 AGACGCAAGCGCTCATACAT 60.179 50.000 12.06 0.00 44.19 2.29
308 309 1.067060 AGACGCAAGCGCTCATACATA 59.933 47.619 12.06 0.00 44.19 2.29
309 310 1.190323 GACGCAAGCGCTCATACATAC 59.810 52.381 12.06 0.00 44.19 2.39
310 311 0.159554 CGCAAGCGCTCATACATACG 59.840 55.000 12.06 0.00 35.30 3.06
317 318 3.954030 CGCTCATACATACGCACATAC 57.046 47.619 0.00 0.00 0.00 2.39
318 319 3.305110 CGCTCATACATACGCACATACA 58.695 45.455 0.00 0.00 0.00 2.29
319 320 3.119628 CGCTCATACATACGCACATACAC 59.880 47.826 0.00 0.00 0.00 2.90
320 321 4.299155 GCTCATACATACGCACATACACT 58.701 43.478 0.00 0.00 0.00 3.55
321 322 4.745125 GCTCATACATACGCACATACACTT 59.255 41.667 0.00 0.00 0.00 3.16
322 323 5.918576 GCTCATACATACGCACATACACTTA 59.081 40.000 0.00 0.00 0.00 2.24
323 324 6.129168 GCTCATACATACGCACATACACTTAC 60.129 42.308 0.00 0.00 0.00 2.34
324 325 6.210796 TCATACATACGCACATACACTTACC 58.789 40.000 0.00 0.00 0.00 2.85
325 326 3.788937 ACATACGCACATACACTTACCC 58.211 45.455 0.00 0.00 0.00 3.69
326 327 2.965572 TACGCACATACACTTACCCC 57.034 50.000 0.00 0.00 0.00 4.95
327 328 1.272807 ACGCACATACACTTACCCCT 58.727 50.000 0.00 0.00 0.00 4.79
328 329 2.459644 ACGCACATACACTTACCCCTA 58.540 47.619 0.00 0.00 0.00 3.53
329 330 3.036091 ACGCACATACACTTACCCCTAT 58.964 45.455 0.00 0.00 0.00 2.57
330 331 3.181469 ACGCACATACACTTACCCCTATG 60.181 47.826 0.00 0.00 0.00 2.23
331 332 3.069016 CGCACATACACTTACCCCTATGA 59.931 47.826 0.00 0.00 0.00 2.15
332 333 4.442332 CGCACATACACTTACCCCTATGAA 60.442 45.833 0.00 0.00 0.00 2.57
333 334 4.814771 GCACATACACTTACCCCTATGAAC 59.185 45.833 0.00 0.00 0.00 3.18
334 335 5.047847 CACATACACTTACCCCTATGAACG 58.952 45.833 0.00 0.00 0.00 3.95
335 336 2.685850 ACACTTACCCCTATGAACGC 57.314 50.000 0.00 0.00 0.00 4.84
336 337 1.903860 ACACTTACCCCTATGAACGCA 59.096 47.619 0.00 0.00 0.00 5.24
337 338 2.277084 CACTTACCCCTATGAACGCAC 58.723 52.381 0.00 0.00 0.00 5.34
338 339 1.903860 ACTTACCCCTATGAACGCACA 59.096 47.619 0.00 0.00 0.00 4.57
339 340 2.277084 CTTACCCCTATGAACGCACAC 58.723 52.381 0.00 0.00 0.00 3.82
340 341 1.268066 TACCCCTATGAACGCACACA 58.732 50.000 0.00 0.00 0.00 3.72
341 342 0.321298 ACCCCTATGAACGCACACAC 60.321 55.000 0.00 0.00 0.00 3.82
342 343 1.358725 CCCCTATGAACGCACACACG 61.359 60.000 0.00 0.00 39.50 4.49
343 344 1.419922 CCTATGAACGCACACACGC 59.580 57.895 0.00 0.00 36.19 5.34
344 345 1.288419 CCTATGAACGCACACACGCA 61.288 55.000 0.00 0.00 36.19 5.24
345 346 0.179250 CTATGAACGCACACACGCAC 60.179 55.000 0.00 0.00 36.19 5.34
346 347 0.876342 TATGAACGCACACACGCACA 60.876 50.000 0.00 0.00 36.19 4.57
347 348 2.350760 GAACGCACACACGCACAC 60.351 61.111 0.00 0.00 36.19 3.82
348 349 3.783588 GAACGCACACACGCACACC 62.784 63.158 0.00 0.00 36.19 4.16
351 352 2.280524 GCACACACGCACACCCTA 60.281 61.111 0.00 0.00 0.00 3.53
352 353 2.604174 GCACACACGCACACCCTAC 61.604 63.158 0.00 0.00 0.00 3.18
353 354 1.959226 CACACACGCACACCCTACC 60.959 63.158 0.00 0.00 0.00 3.18
354 355 2.358247 CACACGCACACCCTACCC 60.358 66.667 0.00 0.00 0.00 3.69
355 356 3.633116 ACACGCACACCCTACCCC 61.633 66.667 0.00 0.00 0.00 4.95
356 357 3.319198 CACGCACACCCTACCCCT 61.319 66.667 0.00 0.00 0.00 4.79
357 358 1.985662 CACGCACACCCTACCCCTA 60.986 63.158 0.00 0.00 0.00 3.53
358 359 1.002533 ACGCACACCCTACCCCTAT 59.997 57.895 0.00 0.00 0.00 2.57
359 360 1.335132 ACGCACACCCTACCCCTATG 61.335 60.000 0.00 0.00 0.00 2.23
360 361 1.046472 CGCACACCCTACCCCTATGA 61.046 60.000 0.00 0.00 0.00 2.15
361 362 0.759346 GCACACCCTACCCCTATGAG 59.241 60.000 0.00 0.00 0.00 2.90
362 363 0.759346 CACACCCTACCCCTATGAGC 59.241 60.000 0.00 0.00 0.00 4.26
363 364 0.341961 ACACCCTACCCCTATGAGCA 59.658 55.000 0.00 0.00 0.00 4.26
364 365 0.759346 CACCCTACCCCTATGAGCAC 59.241 60.000 0.00 0.00 0.00 4.40
365 366 0.400093 ACCCTACCCCTATGAGCACC 60.400 60.000 0.00 0.00 0.00 5.01
366 367 0.104934 CCCTACCCCTATGAGCACCT 60.105 60.000 0.00 0.00 0.00 4.00
367 368 1.343069 CCTACCCCTATGAGCACCTC 58.657 60.000 0.00 0.00 0.00 3.85
368 369 1.343069 CTACCCCTATGAGCACCTCC 58.657 60.000 0.00 0.00 0.00 4.30
369 370 0.469331 TACCCCTATGAGCACCTCCG 60.469 60.000 0.00 0.00 0.00 4.63
370 371 1.457643 CCCCTATGAGCACCTCCGA 60.458 63.158 0.00 0.00 0.00 4.55
371 372 1.467678 CCCCTATGAGCACCTCCGAG 61.468 65.000 0.00 0.00 0.00 4.63
372 373 0.468214 CCCTATGAGCACCTCCGAGA 60.468 60.000 0.00 0.00 0.00 4.04
373 374 0.958091 CCTATGAGCACCTCCGAGAG 59.042 60.000 0.00 0.00 0.00 3.20
374 375 1.477740 CCTATGAGCACCTCCGAGAGA 60.478 57.143 0.00 0.00 0.00 3.10
375 376 1.606668 CTATGAGCACCTCCGAGAGAC 59.393 57.143 0.00 0.00 0.00 3.36
376 377 0.033601 ATGAGCACCTCCGAGAGACT 60.034 55.000 0.00 0.00 0.00 3.24
377 378 0.962855 TGAGCACCTCCGAGAGACTG 60.963 60.000 0.00 0.22 0.00 3.51
378 379 0.678366 GAGCACCTCCGAGAGACTGA 60.678 60.000 0.00 0.00 0.00 3.41
379 380 0.679640 AGCACCTCCGAGAGACTGAG 60.680 60.000 0.00 0.00 0.00 3.35
380 381 0.678366 GCACCTCCGAGAGACTGAGA 60.678 60.000 0.00 0.00 32.76 3.27
381 382 1.091537 CACCTCCGAGAGACTGAGAC 58.908 60.000 0.00 0.00 32.76 3.36
382 383 0.391927 ACCTCCGAGAGACTGAGACG 60.392 60.000 0.00 0.00 32.76 4.18
383 384 1.092921 CCTCCGAGAGACTGAGACGG 61.093 65.000 0.00 0.00 44.09 4.79
384 385 0.391927 CTCCGAGAGACTGAGACGGT 60.392 60.000 0.00 0.00 43.36 4.83
385 386 0.900421 TCCGAGAGACTGAGACGGTA 59.100 55.000 0.00 0.00 43.36 4.02
386 387 1.485480 TCCGAGAGACTGAGACGGTAT 59.515 52.381 0.00 0.00 43.36 2.73
387 388 2.697229 TCCGAGAGACTGAGACGGTATA 59.303 50.000 0.00 0.00 43.36 1.47
388 389 3.324268 TCCGAGAGACTGAGACGGTATAT 59.676 47.826 0.00 0.00 43.36 0.86
389 390 4.066490 CCGAGAGACTGAGACGGTATATT 58.934 47.826 0.00 0.00 38.97 1.28
390 391 5.011431 TCCGAGAGACTGAGACGGTATATTA 59.989 44.000 0.00 0.00 43.36 0.98
391 392 5.875910 CCGAGAGACTGAGACGGTATATTAT 59.124 44.000 0.00 0.00 38.97 1.28
392 393 6.036300 CCGAGAGACTGAGACGGTATATTATC 59.964 46.154 0.00 0.00 38.97 1.75
393 394 6.814644 CGAGAGACTGAGACGGTATATTATCT 59.185 42.308 0.00 0.00 0.00 1.98
394 395 7.332430 CGAGAGACTGAGACGGTATATTATCTT 59.668 40.741 0.00 0.00 0.00 2.40
395 396 8.330466 AGAGACTGAGACGGTATATTATCTTG 57.670 38.462 0.00 0.00 0.00 3.02
396 397 8.158132 AGAGACTGAGACGGTATATTATCTTGA 58.842 37.037 0.00 0.00 0.00 3.02
397 398 8.330466 AGACTGAGACGGTATATTATCTTGAG 57.670 38.462 0.00 0.00 0.00 3.02
398 399 8.158132 AGACTGAGACGGTATATTATCTTGAGA 58.842 37.037 0.00 0.00 0.00 3.27
399 400 8.871629 ACTGAGACGGTATATTATCTTGAGAT 57.128 34.615 0.00 0.00 38.51 2.75
400 401 9.303116 ACTGAGACGGTATATTATCTTGAGATT 57.697 33.333 0.00 0.00 36.05 2.40
412 413 8.649973 ATTATCTTGAGATTTACGAAGTCACC 57.350 34.615 0.00 0.00 37.74 4.02
413 414 4.482386 TCTTGAGATTTACGAAGTCACCG 58.518 43.478 0.00 0.00 43.93 4.94
414 415 3.928727 TGAGATTTACGAAGTCACCGT 57.071 42.857 0.00 0.00 43.93 4.83
415 416 5.181811 TCTTGAGATTTACGAAGTCACCGTA 59.818 40.000 0.00 0.00 43.93 4.02
416 417 4.978186 TGAGATTTACGAAGTCACCGTAG 58.022 43.478 0.00 0.00 43.93 3.51
429 430 4.883300 CGTAGGCGCCTCGTCGTC 62.883 72.222 36.73 15.88 36.23 4.20
430 431 4.883300 GTAGGCGCCTCGTCGTCG 62.883 72.222 36.73 0.00 39.34 5.12
441 442 4.068302 GTCGTCGACGGGAACATC 57.932 61.111 35.05 14.32 40.29 3.06
442 443 1.505353 GTCGTCGACGGGAACATCT 59.495 57.895 35.05 0.00 40.29 2.90
443 444 0.522915 GTCGTCGACGGGAACATCTC 60.523 60.000 35.05 12.17 40.29 2.75
444 445 1.226603 CGTCGACGGGAACATCTCC 60.227 63.158 29.70 0.00 44.54 3.71
445 446 1.654954 CGTCGACGGGAACATCTCCT 61.655 60.000 29.70 0.00 44.68 3.69
446 447 0.100861 GTCGACGGGAACATCTCCTC 59.899 60.000 0.00 0.00 44.68 3.71
447 448 0.034380 TCGACGGGAACATCTCCTCT 60.034 55.000 0.00 0.00 44.68 3.69
448 449 0.382515 CGACGGGAACATCTCCTCTC 59.617 60.000 0.00 0.00 44.68 3.20
449 450 1.475403 GACGGGAACATCTCCTCTCA 58.525 55.000 0.00 0.00 44.68 3.27
450 451 1.135333 GACGGGAACATCTCCTCTCAC 59.865 57.143 0.00 0.00 44.68 3.51
451 452 1.272760 ACGGGAACATCTCCTCTCACT 60.273 52.381 0.00 0.00 44.68 3.41
452 453 1.135915 CGGGAACATCTCCTCTCACTG 59.864 57.143 0.00 0.00 44.68 3.66
453 454 2.461695 GGGAACATCTCCTCTCACTGA 58.538 52.381 0.00 0.00 44.68 3.41
454 455 2.834549 GGGAACATCTCCTCTCACTGAA 59.165 50.000 0.00 0.00 44.68 3.02
455 456 3.261897 GGGAACATCTCCTCTCACTGAAA 59.738 47.826 0.00 0.00 44.68 2.69
456 457 4.502962 GGAACATCTCCTCTCACTGAAAG 58.497 47.826 0.00 0.00 41.61 2.62
457 458 3.608316 ACATCTCCTCTCACTGAAAGC 57.392 47.619 0.00 0.00 37.60 3.51
458 459 2.094286 ACATCTCCTCTCACTGAAAGCG 60.094 50.000 0.00 0.00 37.60 4.68
459 460 0.244994 TCTCCTCTCACTGAAAGCGC 59.755 55.000 0.00 0.00 37.60 5.92
460 461 0.037882 CTCCTCTCACTGAAAGCGCA 60.038 55.000 11.47 0.00 37.60 6.09
461 462 0.610174 TCCTCTCACTGAAAGCGCAT 59.390 50.000 11.47 0.00 37.60 4.73
462 463 1.005340 CCTCTCACTGAAAGCGCATC 58.995 55.000 11.47 8.39 37.60 3.91
463 464 0.644331 CTCTCACTGAAAGCGCATCG 59.356 55.000 11.47 6.82 37.60 3.84
464 465 0.038251 TCTCACTGAAAGCGCATCGT 60.038 50.000 11.47 7.45 37.60 3.73
465 466 0.792640 CTCACTGAAAGCGCATCGTT 59.207 50.000 11.47 0.00 37.60 3.85
466 467 0.512518 TCACTGAAAGCGCATCGTTG 59.487 50.000 11.47 8.67 37.60 4.10
467 468 0.512518 CACTGAAAGCGCATCGTTGA 59.487 50.000 11.47 0.00 37.60 3.18
468 469 1.069973 CACTGAAAGCGCATCGTTGAA 60.070 47.619 11.47 0.00 37.60 2.69
469 470 1.601903 ACTGAAAGCGCATCGTTGAAA 59.398 42.857 11.47 0.00 37.60 2.69
470 471 2.032799 ACTGAAAGCGCATCGTTGAAAA 59.967 40.909 11.47 0.00 37.60 2.29
471 472 3.236816 CTGAAAGCGCATCGTTGAAAAT 58.763 40.909 11.47 0.00 0.00 1.82
472 473 3.233578 TGAAAGCGCATCGTTGAAAATC 58.766 40.909 11.47 0.00 0.00 2.17
473 474 2.262572 AAGCGCATCGTTGAAAATCC 57.737 45.000 11.47 0.00 0.00 3.01
474 475 1.453155 AGCGCATCGTTGAAAATCCT 58.547 45.000 11.47 0.00 0.00 3.24
475 476 1.131126 AGCGCATCGTTGAAAATCCTG 59.869 47.619 11.47 0.00 0.00 3.86
476 477 1.130373 GCGCATCGTTGAAAATCCTGA 59.870 47.619 0.30 0.00 0.00 3.86
477 478 2.414029 GCGCATCGTTGAAAATCCTGAA 60.414 45.455 0.30 0.00 0.00 3.02
478 479 3.820689 CGCATCGTTGAAAATCCTGAAA 58.179 40.909 0.00 0.00 0.00 2.69
479 480 4.414852 CGCATCGTTGAAAATCCTGAAAT 58.585 39.130 0.00 0.00 0.00 2.17
480 481 5.568482 CGCATCGTTGAAAATCCTGAAATA 58.432 37.500 0.00 0.00 0.00 1.40
481 482 6.027131 CGCATCGTTGAAAATCCTGAAATAA 58.973 36.000 0.00 0.00 0.00 1.40
482 483 6.526325 CGCATCGTTGAAAATCCTGAAATAAA 59.474 34.615 0.00 0.00 0.00 1.40
483 484 7.220683 CGCATCGTTGAAAATCCTGAAATAAAT 59.779 33.333 0.00 0.00 0.00 1.40
484 485 8.872845 GCATCGTTGAAAATCCTGAAATAAATT 58.127 29.630 0.00 0.00 0.00 1.82
506 507 7.756395 ATTCAGGAATAATGCAAGTATCAGG 57.244 36.000 0.00 0.00 0.00 3.86
507 508 6.499106 TCAGGAATAATGCAAGTATCAGGA 57.501 37.500 0.00 0.00 0.00 3.86
508 509 7.083062 TCAGGAATAATGCAAGTATCAGGAT 57.917 36.000 0.00 0.00 0.00 3.24
509 510 7.520798 TCAGGAATAATGCAAGTATCAGGATT 58.479 34.615 0.00 0.00 0.00 3.01
510 511 8.000709 TCAGGAATAATGCAAGTATCAGGATTT 58.999 33.333 0.00 0.00 0.00 2.17
511 512 8.080417 CAGGAATAATGCAAGTATCAGGATTTG 58.920 37.037 0.00 0.00 0.00 2.32
512 513 8.000709 AGGAATAATGCAAGTATCAGGATTTGA 58.999 33.333 0.00 0.00 40.85 2.69
513 514 8.632679 GGAATAATGCAAGTATCAGGATTTGAA 58.367 33.333 0.00 0.00 39.77 2.69
514 515 9.455847 GAATAATGCAAGTATCAGGATTTGAAC 57.544 33.333 0.00 0.00 39.77 3.18
515 516 5.841957 ATGCAAGTATCAGGATTTGAACC 57.158 39.130 0.00 0.00 39.77 3.62
516 517 4.016444 TGCAAGTATCAGGATTTGAACCC 58.984 43.478 0.00 0.00 39.77 4.11
517 518 4.263905 TGCAAGTATCAGGATTTGAACCCT 60.264 41.667 0.00 0.00 39.77 4.34
522 523 1.180029 CAGGATTTGAACCCTGCTGG 58.820 55.000 1.89 1.89 42.84 4.85
551 552 0.759959 TAGGGTTTTGGTCGTCTGCA 59.240 50.000 0.00 0.00 0.00 4.41
553 554 0.958822 GGGTTTTGGTCGTCTGCATT 59.041 50.000 0.00 0.00 0.00 3.56
557 558 0.865111 TTTGGTCGTCTGCATTGTCG 59.135 50.000 0.00 0.00 0.00 4.35
574 575 3.829948 TGTCGTCTATCTCCACGAAAAC 58.170 45.455 0.00 0.00 46.08 2.43
730 753 2.696707 CCCCACATCCATTTTCCATGAG 59.303 50.000 0.00 0.00 0.00 2.90
746 769 2.847327 TGAGTTTCTCTGGAAGCTGG 57.153 50.000 0.00 0.00 41.80 4.85
875 1086 5.853282 CAGCCGTTCTAAACAAATTGAGAAG 59.147 40.000 0.00 0.00 0.00 2.85
922 1140 7.624549 TCTTTGCTCTCACTTCTTTGGTATAT 58.375 34.615 0.00 0.00 0.00 0.86
923 1141 8.758829 TCTTTGCTCTCACTTCTTTGGTATATA 58.241 33.333 0.00 0.00 0.00 0.86
924 1142 9.553064 CTTTGCTCTCACTTCTTTGGTATATAT 57.447 33.333 0.00 0.00 0.00 0.86
975 1364 1.291184 TGATTGAGCAGCCGTTGACG 61.291 55.000 0.00 0.00 39.44 4.35
1053 1447 3.496884 TCAATCACACGCAGAAAACCTAC 59.503 43.478 0.00 0.00 0.00 3.18
1054 1448 1.493772 TCACACGCAGAAAACCTACG 58.506 50.000 0.00 0.00 37.65 3.51
1075 1475 3.257561 CTAGCGCGCGTTGCATCT 61.258 61.111 32.35 20.35 46.97 2.90
1398 1798 2.892425 CCTTAGCCGCCTTCGCAG 60.892 66.667 0.00 0.00 34.03 5.18
1596 2016 3.643978 GCATCAGCCACGATCCGC 61.644 66.667 0.00 0.00 33.58 5.54
1774 2334 2.654877 GTCTTCTTCGCCGGGTGA 59.345 61.111 6.10 6.10 0.00 4.02
1775 2335 1.737008 GTCTTCTTCGCCGGGTGAC 60.737 63.158 10.38 0.00 0.00 3.67
1861 2421 3.353029 TACGTCGCGTTCGGGACA 61.353 61.111 30.32 16.68 44.78 4.02
1880 2440 3.074369 TGGCCGCGATTCCAGAGA 61.074 61.111 8.23 0.00 0.00 3.10
1965 2526 2.303022 GGCCGGAGAATATCATCTTGGA 59.697 50.000 5.05 0.00 30.76 3.53
2031 2592 1.005924 GAGTGGGTGGATCAATTGGGT 59.994 52.381 5.42 0.00 0.00 4.51
2067 2628 1.016653 GCGTGAGAGGGTTTCTGAGC 61.017 60.000 0.00 0.00 35.87 4.26
2136 2697 4.143333 GCAGCTTGGCCCATGCAG 62.143 66.667 22.13 15.81 40.13 4.41
2137 2698 3.458163 CAGCTTGGCCCATGCAGG 61.458 66.667 22.13 10.91 40.13 4.85
2145 2706 2.124193 CCCATGCAGGCCGATCAA 60.124 61.111 0.00 0.00 35.39 2.57
2146 2707 2.484062 CCCATGCAGGCCGATCAAC 61.484 63.158 0.00 0.00 35.39 3.18
2147 2708 2.484062 CCATGCAGGCCGATCAACC 61.484 63.158 0.00 0.00 0.00 3.77
2148 2709 1.452651 CATGCAGGCCGATCAACCT 60.453 57.895 0.00 0.00 36.45 3.50
2149 2710 1.033746 CATGCAGGCCGATCAACCTT 61.034 55.000 0.00 0.00 32.56 3.50
2150 2711 0.323725 ATGCAGGCCGATCAACCTTT 60.324 50.000 0.00 0.00 32.56 3.11
2151 2712 0.960364 TGCAGGCCGATCAACCTTTC 60.960 55.000 0.00 0.00 32.56 2.62
2152 2713 0.678048 GCAGGCCGATCAACCTTTCT 60.678 55.000 0.00 0.00 32.56 2.52
2153 2714 1.826385 CAGGCCGATCAACCTTTCTT 58.174 50.000 0.00 0.00 32.56 2.52
2154 2715 2.162681 CAGGCCGATCAACCTTTCTTT 58.837 47.619 0.00 0.00 32.56 2.52
2155 2716 2.558359 CAGGCCGATCAACCTTTCTTTT 59.442 45.455 0.00 0.00 32.56 2.27
2156 2717 3.005791 CAGGCCGATCAACCTTTCTTTTT 59.994 43.478 0.00 0.00 32.56 1.94
2289 2850 1.520600 GAACGATGCGGGGTTTGGTT 61.521 55.000 0.00 0.00 0.00 3.67
2290 2851 1.801309 AACGATGCGGGGTTTGGTTG 61.801 55.000 0.00 0.00 0.00 3.77
2309 2870 2.984562 TGCGAGCCAAGAAATATCACA 58.015 42.857 0.00 0.00 0.00 3.58
2310 2871 3.342719 TGCGAGCCAAGAAATATCACAA 58.657 40.909 0.00 0.00 0.00 3.33
2311 2872 3.126858 TGCGAGCCAAGAAATATCACAAC 59.873 43.478 0.00 0.00 0.00 3.32
2312 2873 3.375299 GCGAGCCAAGAAATATCACAACT 59.625 43.478 0.00 0.00 0.00 3.16
2313 2874 4.494855 GCGAGCCAAGAAATATCACAACTC 60.495 45.833 0.00 0.00 0.00 3.01
2314 2875 4.631377 CGAGCCAAGAAATATCACAACTCA 59.369 41.667 0.00 0.00 0.00 3.41
2315 2876 5.446473 CGAGCCAAGAAATATCACAACTCAC 60.446 44.000 0.00 0.00 0.00 3.51
2358 2919 1.258676 GGAGAGGTCGGAACTGAAGT 58.741 55.000 0.00 0.00 0.00 3.01
2402 2963 1.414158 GGTGCTAGCTATGGAGTCCA 58.586 55.000 15.88 15.88 38.19 4.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 9.569122 AGTCTAAAGCTTGGTCAGTTAAAATAA 57.431 29.630 0.00 0.00 0.00 1.40
5 6 9.216117 GAGTCTAAAGCTTGGTCAGTTAAAATA 57.784 33.333 0.00 0.00 0.00 1.40
6 7 7.939588 AGAGTCTAAAGCTTGGTCAGTTAAAAT 59.060 33.333 0.00 0.00 0.00 1.82
7 8 7.280356 AGAGTCTAAAGCTTGGTCAGTTAAAA 58.720 34.615 0.00 0.00 0.00 1.52
8 9 6.827727 AGAGTCTAAAGCTTGGTCAGTTAAA 58.172 36.000 0.00 0.00 0.00 1.52
9 10 6.267928 AGAGAGTCTAAAGCTTGGTCAGTTAA 59.732 38.462 0.00 0.00 0.00 2.01
10 11 5.775701 AGAGAGTCTAAAGCTTGGTCAGTTA 59.224 40.000 0.00 0.00 0.00 2.24
11 12 4.591072 AGAGAGTCTAAAGCTTGGTCAGTT 59.409 41.667 0.00 0.00 0.00 3.16
12 13 4.156477 AGAGAGTCTAAAGCTTGGTCAGT 58.844 43.478 0.00 0.00 0.00 3.41
13 14 4.799564 AGAGAGTCTAAAGCTTGGTCAG 57.200 45.455 0.00 0.00 0.00 3.51
14 15 5.326069 ACTAGAGAGTCTAAAGCTTGGTCA 58.674 41.667 0.00 0.00 0.00 4.02
15 16 5.907866 ACTAGAGAGTCTAAAGCTTGGTC 57.092 43.478 0.00 0.00 0.00 4.02
16 17 6.673839 AAACTAGAGAGTCTAAAGCTTGGT 57.326 37.500 0.00 0.00 33.58 3.67
17 18 7.382898 AGAAAACTAGAGAGTCTAAAGCTTGG 58.617 38.462 0.00 0.00 33.58 3.61
18 19 8.825667 AAGAAAACTAGAGAGTCTAAAGCTTG 57.174 34.615 0.00 0.00 33.58 4.01
19 20 9.839817 AAAAGAAAACTAGAGAGTCTAAAGCTT 57.160 29.630 0.00 0.00 33.58 3.74
20 21 9.839817 AAAAAGAAAACTAGAGAGTCTAAAGCT 57.160 29.630 0.00 0.00 33.58 3.74
49 50 6.877611 AGAGAGTCTAAATTTCCGCAAAAA 57.122 33.333 0.00 0.00 0.00 1.94
50 51 7.159372 ACTAGAGAGTCTAAATTTCCGCAAAA 58.841 34.615 0.00 0.00 0.00 2.44
51 52 6.698380 ACTAGAGAGTCTAAATTTCCGCAAA 58.302 36.000 0.00 0.00 0.00 3.68
52 53 6.282199 ACTAGAGAGTCTAAATTTCCGCAA 57.718 37.500 0.00 0.00 0.00 4.85
53 54 5.916661 ACTAGAGAGTCTAAATTTCCGCA 57.083 39.130 0.00 0.00 0.00 5.69
54 55 6.331061 TCAACTAGAGAGTCTAAATTTCCGC 58.669 40.000 0.00 0.00 33.58 5.54
55 56 8.934507 AATCAACTAGAGAGTCTAAATTTCCG 57.065 34.615 0.00 0.00 33.58 4.30
62 63 9.244292 TGAAGCTAAATCAACTAGAGAGTCTAA 57.756 33.333 0.00 0.00 33.58 2.10
63 64 8.809468 TGAAGCTAAATCAACTAGAGAGTCTA 57.191 34.615 0.00 0.00 33.58 2.59
64 65 7.396055 ACTGAAGCTAAATCAACTAGAGAGTCT 59.604 37.037 0.00 0.00 33.58 3.24
65 66 7.487829 CACTGAAGCTAAATCAACTAGAGAGTC 59.512 40.741 0.00 0.00 33.58 3.36
66 67 7.039363 ACACTGAAGCTAAATCAACTAGAGAGT 60.039 37.037 0.00 0.00 37.59 3.24
67 68 7.319646 ACACTGAAGCTAAATCAACTAGAGAG 58.680 38.462 0.00 0.00 0.00 3.20
68 69 7.233389 ACACTGAAGCTAAATCAACTAGAGA 57.767 36.000 0.00 0.00 0.00 3.10
69 70 7.219154 CGTACACTGAAGCTAAATCAACTAGAG 59.781 40.741 0.00 0.00 0.00 2.43
70 71 7.027760 CGTACACTGAAGCTAAATCAACTAGA 58.972 38.462 0.00 0.00 0.00 2.43
71 72 7.027760 TCGTACACTGAAGCTAAATCAACTAG 58.972 38.462 0.00 0.00 0.00 2.57
72 73 6.916440 TCGTACACTGAAGCTAAATCAACTA 58.084 36.000 0.00 0.00 0.00 2.24
73 74 5.779922 TCGTACACTGAAGCTAAATCAACT 58.220 37.500 0.00 0.00 0.00 3.16
74 75 5.634020 ACTCGTACACTGAAGCTAAATCAAC 59.366 40.000 0.00 0.00 0.00 3.18
75 76 5.779922 ACTCGTACACTGAAGCTAAATCAA 58.220 37.500 0.00 0.00 0.00 2.57
76 77 5.386958 ACTCGTACACTGAAGCTAAATCA 57.613 39.130 0.00 0.00 0.00 2.57
77 78 6.320171 TGTACTCGTACACTGAAGCTAAATC 58.680 40.000 5.84 0.00 40.77 2.17
78 79 6.263516 TGTACTCGTACACTGAAGCTAAAT 57.736 37.500 5.84 0.00 40.77 1.40
79 80 5.694231 TGTACTCGTACACTGAAGCTAAA 57.306 39.130 5.84 0.00 40.77 1.85
80 81 5.471116 TCTTGTACTCGTACACTGAAGCTAA 59.529 40.000 9.28 0.00 44.81 3.09
81 82 4.999311 TCTTGTACTCGTACACTGAAGCTA 59.001 41.667 9.28 0.00 44.81 3.32
82 83 3.819337 TCTTGTACTCGTACACTGAAGCT 59.181 43.478 9.28 0.00 44.81 3.74
83 84 3.913163 GTCTTGTACTCGTACACTGAAGC 59.087 47.826 9.28 0.00 44.81 3.86
84 85 5.049612 TCAGTCTTGTACTCGTACACTGAAG 60.050 44.000 18.68 11.15 44.81 3.02
85 86 4.818005 TCAGTCTTGTACTCGTACACTGAA 59.182 41.667 18.68 8.87 44.81 3.02
86 87 4.383173 TCAGTCTTGTACTCGTACACTGA 58.617 43.478 17.75 17.75 44.81 3.41
87 88 4.744136 TCAGTCTTGTACTCGTACACTG 57.256 45.455 9.28 12.71 44.81 3.66
88 89 5.961396 AATCAGTCTTGTACTCGTACACT 57.039 39.130 9.28 1.91 44.81 3.55
89 90 6.605849 TGTAATCAGTCTTGTACTCGTACAC 58.394 40.000 9.28 0.00 44.81 2.90
90 91 6.806388 TGTAATCAGTCTTGTACTCGTACA 57.194 37.500 5.84 5.84 43.61 2.90
91 92 6.691818 CCATGTAATCAGTCTTGTACTCGTAC 59.308 42.308 0.35 0.35 35.76 3.67
92 93 6.376299 ACCATGTAATCAGTCTTGTACTCGTA 59.624 38.462 0.00 0.00 35.76 3.43
93 94 5.185249 ACCATGTAATCAGTCTTGTACTCGT 59.815 40.000 0.00 0.00 35.76 4.18
94 95 5.651530 ACCATGTAATCAGTCTTGTACTCG 58.348 41.667 0.00 0.00 35.76 4.18
95 96 8.033038 TGTTACCATGTAATCAGTCTTGTACTC 58.967 37.037 0.00 0.00 35.76 2.59
96 97 7.903145 TGTTACCATGTAATCAGTCTTGTACT 58.097 34.615 0.00 0.00 39.81 2.73
97 98 8.033038 TCTGTTACCATGTAATCAGTCTTGTAC 58.967 37.037 12.17 0.00 0.00 2.90
98 99 8.129496 TCTGTTACCATGTAATCAGTCTTGTA 57.871 34.615 12.17 0.00 0.00 2.41
99 100 7.004555 TCTGTTACCATGTAATCAGTCTTGT 57.995 36.000 12.17 0.00 0.00 3.16
100 101 7.905604 TTCTGTTACCATGTAATCAGTCTTG 57.094 36.000 12.17 0.00 0.00 3.02
101 102 8.918202 TTTTCTGTTACCATGTAATCAGTCTT 57.082 30.769 12.17 0.00 0.00 3.01
102 103 8.918202 TTTTTCTGTTACCATGTAATCAGTCT 57.082 30.769 12.17 0.00 0.00 3.24
129 130 9.612066 CACAAAATATATTTGGTATTTGGCCTT 57.388 29.630 16.28 0.00 32.35 4.35
130 131 7.714813 GCACAAAATATATTTGGTATTTGGCCT 59.285 33.333 16.28 0.00 32.35 5.19
131 132 7.714813 AGCACAAAATATATTTGGTATTTGGCC 59.285 33.333 16.28 0.00 32.35 5.36
132 133 8.661352 AGCACAAAATATATTTGGTATTTGGC 57.339 30.769 16.28 14.65 32.35 4.52
139 140 9.169592 ACTACGTTAGCACAAAATATATTTGGT 57.830 29.630 11.79 11.79 34.34 3.67
144 145 9.472361 CCAGTACTACGTTAGCACAAAATATAT 57.528 33.333 0.00 0.00 0.00 0.86
145 146 7.436080 GCCAGTACTACGTTAGCACAAAATATA 59.564 37.037 0.00 0.00 0.00 0.86
146 147 6.257193 GCCAGTACTACGTTAGCACAAAATAT 59.743 38.462 0.00 0.00 0.00 1.28
147 148 5.577945 GCCAGTACTACGTTAGCACAAAATA 59.422 40.000 0.00 0.00 0.00 1.40
148 149 4.390909 GCCAGTACTACGTTAGCACAAAAT 59.609 41.667 0.00 0.00 0.00 1.82
149 150 3.742369 GCCAGTACTACGTTAGCACAAAA 59.258 43.478 0.00 0.00 0.00 2.44
150 151 3.006110 AGCCAGTACTACGTTAGCACAAA 59.994 43.478 0.00 0.00 0.00 2.83
151 152 2.559668 AGCCAGTACTACGTTAGCACAA 59.440 45.455 0.00 0.00 0.00 3.33
152 153 2.165167 AGCCAGTACTACGTTAGCACA 58.835 47.619 0.00 0.00 0.00 4.57
153 154 2.935481 AGCCAGTACTACGTTAGCAC 57.065 50.000 0.00 0.00 0.00 4.40
154 155 3.087031 AGAAGCCAGTACTACGTTAGCA 58.913 45.455 0.00 0.00 0.00 3.49
155 156 3.779271 AGAAGCCAGTACTACGTTAGC 57.221 47.619 0.00 0.00 0.00 3.09
156 157 5.564048 AGAAGAAGCCAGTACTACGTTAG 57.436 43.478 0.00 0.00 0.00 2.34
157 158 5.336213 CCAAGAAGAAGCCAGTACTACGTTA 60.336 44.000 0.00 0.00 0.00 3.18
158 159 4.557205 CAAGAAGAAGCCAGTACTACGTT 58.443 43.478 0.00 0.00 0.00 3.99
159 160 3.056749 CCAAGAAGAAGCCAGTACTACGT 60.057 47.826 0.00 0.00 0.00 3.57
160 161 3.512680 CCAAGAAGAAGCCAGTACTACG 58.487 50.000 0.00 0.00 0.00 3.51
161 162 3.055747 AGCCAAGAAGAAGCCAGTACTAC 60.056 47.826 0.00 0.00 0.00 2.73
162 163 3.055819 CAGCCAAGAAGAAGCCAGTACTA 60.056 47.826 0.00 0.00 0.00 1.82
163 164 1.981495 AGCCAAGAAGAAGCCAGTACT 59.019 47.619 0.00 0.00 0.00 2.73
164 165 2.079925 CAGCCAAGAAGAAGCCAGTAC 58.920 52.381 0.00 0.00 0.00 2.73
165 166 1.611673 GCAGCCAAGAAGAAGCCAGTA 60.612 52.381 0.00 0.00 0.00 2.74
166 167 0.892814 GCAGCCAAGAAGAAGCCAGT 60.893 55.000 0.00 0.00 0.00 4.00
167 168 1.593296 GGCAGCCAAGAAGAAGCCAG 61.593 60.000 6.55 0.00 41.63 4.85
168 169 1.604593 GGCAGCCAAGAAGAAGCCA 60.605 57.895 6.55 0.00 41.63 4.75
169 170 0.969409 ATGGCAGCCAAGAAGAAGCC 60.969 55.000 20.84 0.00 42.32 4.35
170 171 0.893447 AATGGCAGCCAAGAAGAAGC 59.107 50.000 20.84 0.00 36.95 3.86
171 172 3.672767 AAAATGGCAGCCAAGAAGAAG 57.327 42.857 20.84 0.00 36.95 2.85
172 173 5.011943 ACAATAAAATGGCAGCCAAGAAGAA 59.988 36.000 20.84 2.40 36.95 2.52
173 174 4.527816 ACAATAAAATGGCAGCCAAGAAGA 59.472 37.500 20.84 3.34 36.95 2.87
174 175 4.628333 CACAATAAAATGGCAGCCAAGAAG 59.372 41.667 20.84 7.57 36.95 2.85
175 176 4.040217 ACACAATAAAATGGCAGCCAAGAA 59.960 37.500 20.84 4.80 36.95 2.52
176 177 3.577848 ACACAATAAAATGGCAGCCAAGA 59.422 39.130 20.84 4.15 36.95 3.02
177 178 3.680937 CACACAATAAAATGGCAGCCAAG 59.319 43.478 20.84 5.19 36.95 3.61
178 179 3.070734 ACACACAATAAAATGGCAGCCAA 59.929 39.130 20.84 0.98 36.95 4.52
179 180 2.632028 ACACACAATAAAATGGCAGCCA 59.368 40.909 18.99 18.99 38.19 4.75
180 181 3.317603 ACACACAATAAAATGGCAGCC 57.682 42.857 3.66 3.66 0.00 4.85
181 182 3.432933 CCAACACACAATAAAATGGCAGC 59.567 43.478 0.00 0.00 0.00 5.25
182 183 4.880759 TCCAACACACAATAAAATGGCAG 58.119 39.130 0.00 0.00 0.00 4.85
183 184 4.798924 GCTCCAACACACAATAAAATGGCA 60.799 41.667 0.00 0.00 0.00 4.92
184 185 3.679502 GCTCCAACACACAATAAAATGGC 59.320 43.478 0.00 0.00 0.00 4.40
185 186 5.138125 AGCTCCAACACACAATAAAATGG 57.862 39.130 0.00 0.00 0.00 3.16
186 187 7.481275 AAAAGCTCCAACACACAATAAAATG 57.519 32.000 0.00 0.00 0.00 2.32
209 210 6.327104 TCTCCCTGTAGTGGTGTACTTAAAAA 59.673 38.462 0.00 0.00 40.89 1.94
210 211 5.840149 TCTCCCTGTAGTGGTGTACTTAAAA 59.160 40.000 0.00 0.00 40.89 1.52
211 212 5.396485 TCTCCCTGTAGTGGTGTACTTAAA 58.604 41.667 0.00 0.00 40.89 1.52
212 213 5.001833 TCTCCCTGTAGTGGTGTACTTAA 57.998 43.478 0.00 0.00 40.89 1.85
213 214 4.662966 TCTCCCTGTAGTGGTGTACTTA 57.337 45.455 0.00 0.00 40.89 2.24
214 215 3.537795 TCTCCCTGTAGTGGTGTACTT 57.462 47.619 0.00 0.00 40.89 2.24
215 216 3.537795 TTCTCCCTGTAGTGGTGTACT 57.462 47.619 0.00 0.00 43.56 2.73
216 217 3.306571 GGTTTCTCCCTGTAGTGGTGTAC 60.307 52.174 0.00 0.00 0.00 2.90
217 218 2.901839 GGTTTCTCCCTGTAGTGGTGTA 59.098 50.000 0.00 0.00 0.00 2.90
218 219 1.697982 GGTTTCTCCCTGTAGTGGTGT 59.302 52.381 0.00 0.00 0.00 4.16
219 220 1.697432 TGGTTTCTCCCTGTAGTGGTG 59.303 52.381 0.00 0.00 34.77 4.17
220 221 2.112279 TGGTTTCTCCCTGTAGTGGT 57.888 50.000 0.00 0.00 34.77 4.16
221 222 2.637872 TCTTGGTTTCTCCCTGTAGTGG 59.362 50.000 0.00 0.00 34.77 4.00
222 223 4.559862 ATCTTGGTTTCTCCCTGTAGTG 57.440 45.455 0.00 0.00 34.77 2.74
223 224 5.726793 ACATATCTTGGTTTCTCCCTGTAGT 59.273 40.000 0.00 0.00 34.77 2.73
224 225 6.240549 ACATATCTTGGTTTCTCCCTGTAG 57.759 41.667 0.00 0.00 34.77 2.74
225 226 6.414732 CAACATATCTTGGTTTCTCCCTGTA 58.585 40.000 0.00 0.00 34.77 2.74
226 227 5.256474 CAACATATCTTGGTTTCTCCCTGT 58.744 41.667 0.00 0.00 34.77 4.00
227 228 4.096984 GCAACATATCTTGGTTTCTCCCTG 59.903 45.833 0.00 0.00 34.77 4.45
228 229 4.018050 AGCAACATATCTTGGTTTCTCCCT 60.018 41.667 0.00 0.00 34.77 4.20
229 230 4.273318 AGCAACATATCTTGGTTTCTCCC 58.727 43.478 0.00 0.00 34.77 4.30
230 231 5.415701 TGAAGCAACATATCTTGGTTTCTCC 59.584 40.000 9.14 0.00 40.95 3.71
231 232 6.500684 TGAAGCAACATATCTTGGTTTCTC 57.499 37.500 9.14 0.00 40.95 2.87
232 233 6.899393 TTGAAGCAACATATCTTGGTTTCT 57.101 33.333 9.14 0.00 40.95 2.52
233 234 7.063780 CCATTTGAAGCAACATATCTTGGTTTC 59.936 37.037 9.14 4.63 40.95 2.78
234 235 6.875195 CCATTTGAAGCAACATATCTTGGTTT 59.125 34.615 9.14 0.00 40.95 3.27
235 236 6.014327 ACCATTTGAAGCAACATATCTTGGTT 60.014 34.615 7.73 7.73 42.99 3.67
236 237 5.481473 ACCATTTGAAGCAACATATCTTGGT 59.519 36.000 0.00 0.00 33.24 3.67
237 238 5.969423 ACCATTTGAAGCAACATATCTTGG 58.031 37.500 0.00 0.00 0.00 3.61
238 239 7.703621 CCTAACCATTTGAAGCAACATATCTTG 59.296 37.037 0.00 0.00 0.00 3.02
239 240 7.397192 ACCTAACCATTTGAAGCAACATATCTT 59.603 33.333 0.00 0.00 0.00 2.40
240 241 6.891908 ACCTAACCATTTGAAGCAACATATCT 59.108 34.615 0.00 0.00 0.00 1.98
241 242 7.100458 ACCTAACCATTTGAAGCAACATATC 57.900 36.000 0.00 0.00 0.00 1.63
242 243 7.480760 AACCTAACCATTTGAAGCAACATAT 57.519 32.000 0.00 0.00 0.00 1.78
243 244 6.909550 AACCTAACCATTTGAAGCAACATA 57.090 33.333 0.00 0.00 0.00 2.29
244 245 5.806654 AACCTAACCATTTGAAGCAACAT 57.193 34.783 0.00 0.00 0.00 2.71
245 246 5.606348 AAACCTAACCATTTGAAGCAACA 57.394 34.783 0.00 0.00 0.00 3.33
246 247 6.918892 AAAAACCTAACCATTTGAAGCAAC 57.081 33.333 0.00 0.00 0.00 4.17
271 272 6.561737 TGCGTCTGTACCAATATTCAAAAA 57.438 33.333 0.00 0.00 0.00 1.94
272 273 6.561737 TTGCGTCTGTACCAATATTCAAAA 57.438 33.333 0.00 0.00 0.00 2.44
273 274 5.391523 GCTTGCGTCTGTACCAATATTCAAA 60.392 40.000 0.00 0.00 0.00 2.69
274 275 4.094294 GCTTGCGTCTGTACCAATATTCAA 59.906 41.667 0.00 0.00 0.00 2.69
275 276 3.621268 GCTTGCGTCTGTACCAATATTCA 59.379 43.478 0.00 0.00 0.00 2.57
276 277 3.302480 CGCTTGCGTCTGTACCAATATTC 60.302 47.826 6.86 0.00 0.00 1.75
277 278 2.607635 CGCTTGCGTCTGTACCAATATT 59.392 45.455 6.86 0.00 0.00 1.28
278 279 2.201732 CGCTTGCGTCTGTACCAATAT 58.798 47.619 6.86 0.00 0.00 1.28
279 280 1.635844 CGCTTGCGTCTGTACCAATA 58.364 50.000 6.86 0.00 0.00 1.90
280 281 1.635663 GCGCTTGCGTCTGTACCAAT 61.636 55.000 16.38 0.00 0.00 3.16
281 282 2.314647 GCGCTTGCGTCTGTACCAA 61.315 57.895 16.38 0.00 0.00 3.67
282 283 2.736995 GCGCTTGCGTCTGTACCA 60.737 61.111 16.38 0.00 0.00 3.25
283 284 2.432628 AGCGCTTGCGTCTGTACC 60.433 61.111 16.38 0.00 45.69 3.34
284 285 1.078759 ATGAGCGCTTGCGTCTGTAC 61.079 55.000 13.26 0.00 45.69 2.90
285 286 0.454196 TATGAGCGCTTGCGTCTGTA 59.546 50.000 13.26 6.26 45.69 2.74
286 287 1.078759 GTATGAGCGCTTGCGTCTGT 61.079 55.000 13.26 7.66 45.69 3.41
287 288 1.078201 TGTATGAGCGCTTGCGTCTG 61.078 55.000 13.26 0.00 45.69 3.51
288 289 0.179100 ATGTATGAGCGCTTGCGTCT 60.179 50.000 13.26 13.17 45.69 4.18
289 290 1.190323 GTATGTATGAGCGCTTGCGTC 59.810 52.381 13.26 12.36 45.69 5.19
290 291 1.209128 GTATGTATGAGCGCTTGCGT 58.791 50.000 13.26 3.97 45.69 5.24
291 292 0.159554 CGTATGTATGAGCGCTTGCG 59.840 55.000 13.26 10.90 45.69 4.85
292 293 0.111089 GCGTATGTATGAGCGCTTGC 60.111 55.000 13.26 0.00 45.48 4.01
297 298 3.119628 GTGTATGTGCGTATGTATGAGCG 59.880 47.826 0.00 0.00 0.00 5.03
298 299 4.299155 AGTGTATGTGCGTATGTATGAGC 58.701 43.478 0.00 0.00 0.00 4.26
299 300 6.362551 GGTAAGTGTATGTGCGTATGTATGAG 59.637 42.308 0.00 0.00 0.00 2.90
300 301 6.210796 GGTAAGTGTATGTGCGTATGTATGA 58.789 40.000 0.00 0.00 0.00 2.15
301 302 5.404366 GGGTAAGTGTATGTGCGTATGTATG 59.596 44.000 0.00 0.00 0.00 2.39
302 303 5.510179 GGGGTAAGTGTATGTGCGTATGTAT 60.510 44.000 0.00 0.00 0.00 2.29
303 304 4.202141 GGGGTAAGTGTATGTGCGTATGTA 60.202 45.833 0.00 0.00 0.00 2.29
304 305 3.431207 GGGGTAAGTGTATGTGCGTATGT 60.431 47.826 0.00 0.00 0.00 2.29
305 306 3.128349 GGGGTAAGTGTATGTGCGTATG 58.872 50.000 0.00 0.00 0.00 2.39
306 307 3.036091 AGGGGTAAGTGTATGTGCGTAT 58.964 45.455 0.00 0.00 0.00 3.06
307 308 2.459644 AGGGGTAAGTGTATGTGCGTA 58.540 47.619 0.00 0.00 0.00 4.42
308 309 1.272807 AGGGGTAAGTGTATGTGCGT 58.727 50.000 0.00 0.00 0.00 5.24
309 310 3.069016 TCATAGGGGTAAGTGTATGTGCG 59.931 47.826 0.00 0.00 0.00 5.34
310 311 4.682778 TCATAGGGGTAAGTGTATGTGC 57.317 45.455 0.00 0.00 0.00 4.57
311 312 5.047847 CGTTCATAGGGGTAAGTGTATGTG 58.952 45.833 0.00 0.00 0.00 3.21
312 313 4.442472 GCGTTCATAGGGGTAAGTGTATGT 60.442 45.833 0.00 0.00 0.00 2.29
313 314 4.056050 GCGTTCATAGGGGTAAGTGTATG 58.944 47.826 0.00 0.00 0.00 2.39
314 315 3.707611 TGCGTTCATAGGGGTAAGTGTAT 59.292 43.478 0.00 0.00 0.00 2.29
315 316 3.098377 TGCGTTCATAGGGGTAAGTGTA 58.902 45.455 0.00 0.00 0.00 2.90
316 317 1.903860 TGCGTTCATAGGGGTAAGTGT 59.096 47.619 0.00 0.00 0.00 3.55
317 318 2.277084 GTGCGTTCATAGGGGTAAGTG 58.723 52.381 0.00 0.00 0.00 3.16
318 319 1.903860 TGTGCGTTCATAGGGGTAAGT 59.096 47.619 0.00 0.00 0.00 2.24
319 320 2.277084 GTGTGCGTTCATAGGGGTAAG 58.723 52.381 0.00 0.00 0.00 2.34
320 321 1.624312 TGTGTGCGTTCATAGGGGTAA 59.376 47.619 0.00 0.00 0.00 2.85
321 322 1.066716 GTGTGTGCGTTCATAGGGGTA 60.067 52.381 0.00 0.00 0.00 3.69
322 323 0.321298 GTGTGTGCGTTCATAGGGGT 60.321 55.000 0.00 0.00 0.00 4.95
323 324 1.358725 CGTGTGTGCGTTCATAGGGG 61.359 60.000 0.00 0.00 0.00 4.79
324 325 1.966493 GCGTGTGTGCGTTCATAGGG 61.966 60.000 0.00 0.00 0.00 3.53
325 326 1.288419 TGCGTGTGTGCGTTCATAGG 61.288 55.000 0.00 0.00 37.81 2.57
326 327 0.179250 GTGCGTGTGTGCGTTCATAG 60.179 55.000 0.00 0.00 37.81 2.23
327 328 0.876342 TGTGCGTGTGTGCGTTCATA 60.876 50.000 0.00 0.00 37.81 2.15
328 329 2.176926 TGTGCGTGTGTGCGTTCAT 61.177 52.632 0.00 0.00 37.81 2.57
329 330 2.815647 TGTGCGTGTGTGCGTTCA 60.816 55.556 0.00 0.00 37.81 3.18
330 331 2.350760 GTGTGCGTGTGTGCGTTC 60.351 61.111 0.00 0.00 37.81 3.95
331 332 3.871574 GGTGTGCGTGTGTGCGTT 61.872 61.111 0.00 0.00 37.81 4.84
334 335 2.280524 TAGGGTGTGCGTGTGTGC 60.281 61.111 0.00 0.00 0.00 4.57
335 336 1.959226 GGTAGGGTGTGCGTGTGTG 60.959 63.158 0.00 0.00 0.00 3.82
336 337 2.424302 GGTAGGGTGTGCGTGTGT 59.576 61.111 0.00 0.00 0.00 3.72
337 338 2.358247 GGGTAGGGTGTGCGTGTG 60.358 66.667 0.00 0.00 0.00 3.82
338 339 2.735151 TAGGGGTAGGGTGTGCGTGT 62.735 60.000 0.00 0.00 0.00 4.49
339 340 1.335132 ATAGGGGTAGGGTGTGCGTG 61.335 60.000 0.00 0.00 0.00 5.34
340 341 1.002533 ATAGGGGTAGGGTGTGCGT 59.997 57.895 0.00 0.00 0.00 5.24
341 342 1.046472 TCATAGGGGTAGGGTGTGCG 61.046 60.000 0.00 0.00 0.00 5.34
342 343 0.759346 CTCATAGGGGTAGGGTGTGC 59.241 60.000 0.00 0.00 0.00 4.57
343 344 0.759346 GCTCATAGGGGTAGGGTGTG 59.241 60.000 0.00 0.00 0.00 3.82
344 345 0.341961 TGCTCATAGGGGTAGGGTGT 59.658 55.000 0.00 0.00 0.00 4.16
345 346 0.759346 GTGCTCATAGGGGTAGGGTG 59.241 60.000 0.00 0.00 0.00 4.61
346 347 0.400093 GGTGCTCATAGGGGTAGGGT 60.400 60.000 0.00 0.00 0.00 4.34
347 348 0.104934 AGGTGCTCATAGGGGTAGGG 60.105 60.000 0.00 0.00 0.00 3.53
348 349 1.343069 GAGGTGCTCATAGGGGTAGG 58.657 60.000 0.00 0.00 0.00 3.18
349 350 1.343069 GGAGGTGCTCATAGGGGTAG 58.657 60.000 0.00 0.00 31.08 3.18
350 351 0.469331 CGGAGGTGCTCATAGGGGTA 60.469 60.000 0.00 0.00 31.08 3.69
351 352 1.762460 CGGAGGTGCTCATAGGGGT 60.762 63.158 0.00 0.00 31.08 4.95
352 353 1.457643 TCGGAGGTGCTCATAGGGG 60.458 63.158 0.00 0.00 31.08 4.79
353 354 0.468214 TCTCGGAGGTGCTCATAGGG 60.468 60.000 4.96 0.00 31.08 3.53
354 355 0.958091 CTCTCGGAGGTGCTCATAGG 59.042 60.000 4.96 0.00 31.08 2.57
355 356 1.606668 GTCTCTCGGAGGTGCTCATAG 59.393 57.143 4.96 0.00 31.08 2.23
356 357 1.213182 AGTCTCTCGGAGGTGCTCATA 59.787 52.381 4.96 0.00 31.08 2.15
357 358 0.033601 AGTCTCTCGGAGGTGCTCAT 60.034 55.000 4.96 0.00 31.08 2.90
358 359 0.962855 CAGTCTCTCGGAGGTGCTCA 60.963 60.000 4.96 0.00 31.08 4.26
359 360 0.678366 TCAGTCTCTCGGAGGTGCTC 60.678 60.000 4.96 0.00 0.00 4.26
360 361 0.679640 CTCAGTCTCTCGGAGGTGCT 60.680 60.000 4.96 0.00 35.32 4.40
361 362 0.678366 TCTCAGTCTCTCGGAGGTGC 60.678 60.000 4.96 0.00 38.55 5.01
362 363 1.091537 GTCTCAGTCTCTCGGAGGTG 58.908 60.000 4.96 0.00 38.55 4.00
363 364 0.391927 CGTCTCAGTCTCTCGGAGGT 60.392 60.000 4.96 0.00 38.55 3.85
364 365 1.092921 CCGTCTCAGTCTCTCGGAGG 61.093 65.000 4.96 0.00 43.22 4.30
365 366 0.391927 ACCGTCTCAGTCTCTCGGAG 60.392 60.000 8.84 0.00 43.22 4.63
366 367 0.900421 TACCGTCTCAGTCTCTCGGA 59.100 55.000 8.84 0.00 43.22 4.55
367 368 1.956297 ATACCGTCTCAGTCTCTCGG 58.044 55.000 0.00 0.00 45.53 4.63
368 369 6.814644 AGATAATATACCGTCTCAGTCTCTCG 59.185 42.308 0.00 0.00 0.00 4.04
369 370 8.447833 CAAGATAATATACCGTCTCAGTCTCTC 58.552 40.741 0.00 0.00 0.00 3.20
370 371 8.158132 TCAAGATAATATACCGTCTCAGTCTCT 58.842 37.037 0.00 0.00 0.00 3.10
371 372 8.325421 TCAAGATAATATACCGTCTCAGTCTC 57.675 38.462 0.00 0.00 0.00 3.36
372 373 8.158132 TCTCAAGATAATATACCGTCTCAGTCT 58.842 37.037 0.00 0.00 0.00 3.24
373 374 8.325421 TCTCAAGATAATATACCGTCTCAGTC 57.675 38.462 0.00 0.00 0.00 3.51
374 375 8.871629 ATCTCAAGATAATATACCGTCTCAGT 57.128 34.615 0.00 0.00 32.01 3.41
386 387 9.745880 GGTGACTTCGTAAATCTCAAGATAATA 57.254 33.333 0.00 0.00 33.73 0.98
387 388 7.435488 CGGTGACTTCGTAAATCTCAAGATAAT 59.565 37.037 0.00 0.00 33.73 1.28
388 389 6.750501 CGGTGACTTCGTAAATCTCAAGATAA 59.249 38.462 0.00 0.00 33.73 1.75
389 390 6.127814 ACGGTGACTTCGTAAATCTCAAGATA 60.128 38.462 0.00 0.00 39.22 1.98
390 391 5.103000 CGGTGACTTCGTAAATCTCAAGAT 58.897 41.667 0.00 0.00 36.07 2.40
391 392 4.022589 ACGGTGACTTCGTAAATCTCAAGA 60.023 41.667 0.00 0.00 39.22 3.02
392 393 4.235360 ACGGTGACTTCGTAAATCTCAAG 58.765 43.478 0.00 0.00 39.22 3.02
393 394 4.247267 ACGGTGACTTCGTAAATCTCAA 57.753 40.909 0.00 0.00 39.22 3.02
394 395 3.928727 ACGGTGACTTCGTAAATCTCA 57.071 42.857 0.00 0.00 39.22 3.27
395 396 4.349501 CCTACGGTGACTTCGTAAATCTC 58.650 47.826 0.00 0.00 41.62 2.75
396 397 3.428589 GCCTACGGTGACTTCGTAAATCT 60.429 47.826 0.00 0.00 41.62 2.40
397 398 2.856557 GCCTACGGTGACTTCGTAAATC 59.143 50.000 0.00 0.00 41.62 2.17
398 399 2.733227 CGCCTACGGTGACTTCGTAAAT 60.733 50.000 0.00 0.00 41.62 1.40
399 400 1.401409 CGCCTACGGTGACTTCGTAAA 60.401 52.381 0.00 0.00 41.62 2.01
400 401 0.168788 CGCCTACGGTGACTTCGTAA 59.831 55.000 0.00 0.00 41.62 3.18
401 402 1.796151 CGCCTACGGTGACTTCGTA 59.204 57.895 0.00 0.00 41.38 3.43
402 403 2.564975 CGCCTACGGTGACTTCGT 59.435 61.111 0.00 0.00 43.64 3.85
403 404 2.879462 GCGCCTACGGTGACTTCG 60.879 66.667 0.00 0.00 40.57 3.79
404 405 2.508663 GGCGCCTACGGTGACTTC 60.509 66.667 22.15 0.00 38.38 3.01
407 408 4.849329 CGAGGCGCCTACGGTGAC 62.849 72.222 32.97 14.51 42.50 3.67
409 410 4.849329 GACGAGGCGCCTACGGTG 62.849 72.222 34.97 23.88 40.57 4.94
412 413 4.883300 GACGACGAGGCGCCTACG 62.883 72.222 32.91 32.91 44.07 3.51
424 425 0.522915 GAGATGTTCCCGTCGACGAC 60.523 60.000 37.65 27.09 43.02 4.34
425 426 1.651240 GGAGATGTTCCCGTCGACGA 61.651 60.000 37.65 18.99 40.37 4.20
426 427 1.226603 GGAGATGTTCCCGTCGACG 60.227 63.158 30.33 30.33 40.37 5.12
427 428 4.808649 GGAGATGTTCCCGTCGAC 57.191 61.111 5.18 5.18 40.37 4.20
435 436 3.932089 GCTTTCAGTGAGAGGAGATGTTC 59.068 47.826 12.28 0.00 0.00 3.18
436 437 3.616076 CGCTTTCAGTGAGAGGAGATGTT 60.616 47.826 12.28 0.00 0.00 2.71
437 438 2.094286 CGCTTTCAGTGAGAGGAGATGT 60.094 50.000 12.28 0.00 0.00 3.06
438 439 2.538437 CGCTTTCAGTGAGAGGAGATG 58.462 52.381 12.28 0.00 0.00 2.90
439 440 1.134848 GCGCTTTCAGTGAGAGGAGAT 60.135 52.381 12.28 0.00 0.00 2.75
440 441 0.244994 GCGCTTTCAGTGAGAGGAGA 59.755 55.000 12.28 0.00 0.00 3.71
441 442 0.037882 TGCGCTTTCAGTGAGAGGAG 60.038 55.000 9.73 2.39 0.00 3.69
442 443 0.610174 ATGCGCTTTCAGTGAGAGGA 59.390 50.000 9.73 0.00 0.00 3.71
443 444 1.005340 GATGCGCTTTCAGTGAGAGG 58.995 55.000 9.73 4.24 0.00 3.69
444 445 0.644331 CGATGCGCTTTCAGTGAGAG 59.356 55.000 9.73 6.31 0.00 3.20
445 446 0.038251 ACGATGCGCTTTCAGTGAGA 60.038 50.000 9.73 0.00 0.00 3.27
446 447 0.792640 AACGATGCGCTTTCAGTGAG 59.207 50.000 9.73 0.00 0.00 3.51
447 448 0.512518 CAACGATGCGCTTTCAGTGA 59.487 50.000 9.73 0.00 0.00 3.41
448 449 0.512518 TCAACGATGCGCTTTCAGTG 59.487 50.000 9.73 6.71 0.00 3.66
449 450 1.225855 TTCAACGATGCGCTTTCAGT 58.774 45.000 9.73 5.86 0.00 3.41
450 451 2.314561 TTTCAACGATGCGCTTTCAG 57.685 45.000 9.73 5.25 0.00 3.02
451 452 2.765108 TTTTCAACGATGCGCTTTCA 57.235 40.000 9.73 0.00 0.00 2.69
452 453 2.594214 GGATTTTCAACGATGCGCTTTC 59.406 45.455 9.73 4.77 0.00 2.62
453 454 2.228822 AGGATTTTCAACGATGCGCTTT 59.771 40.909 9.73 0.00 0.00 3.51
454 455 1.812571 AGGATTTTCAACGATGCGCTT 59.187 42.857 9.73 0.55 0.00 4.68
455 456 1.131126 CAGGATTTTCAACGATGCGCT 59.869 47.619 9.73 0.00 0.00 5.92
456 457 1.130373 TCAGGATTTTCAACGATGCGC 59.870 47.619 0.00 0.00 0.00 6.09
457 458 3.469899 TTCAGGATTTTCAACGATGCG 57.530 42.857 0.00 0.00 0.00 4.73
458 459 7.810766 TTTATTTCAGGATTTTCAACGATGC 57.189 32.000 0.00 0.00 0.00 3.91
480 481 8.636213 CCTGATACTTGCATTATTCCTGAATTT 58.364 33.333 0.00 0.00 32.50 1.82
481 482 8.000709 TCCTGATACTTGCATTATTCCTGAATT 58.999 33.333 0.00 0.00 32.50 2.17
482 483 7.520798 TCCTGATACTTGCATTATTCCTGAAT 58.479 34.615 0.00 0.00 34.93 2.57
483 484 6.899089 TCCTGATACTTGCATTATTCCTGAA 58.101 36.000 0.00 0.00 0.00 3.02
484 485 6.499106 TCCTGATACTTGCATTATTCCTGA 57.501 37.500 0.00 0.00 0.00 3.86
485 486 7.756395 AATCCTGATACTTGCATTATTCCTG 57.244 36.000 0.00 0.00 0.00 3.86
486 487 8.000709 TCAAATCCTGATACTTGCATTATTCCT 58.999 33.333 0.00 0.00 0.00 3.36
487 488 8.169977 TCAAATCCTGATACTTGCATTATTCC 57.830 34.615 0.00 0.00 0.00 3.01
488 489 9.455847 GTTCAAATCCTGATACTTGCATTATTC 57.544 33.333 0.00 0.00 32.78 1.75
489 490 8.416329 GGTTCAAATCCTGATACTTGCATTATT 58.584 33.333 0.00 0.00 32.78 1.40
490 491 7.014615 GGGTTCAAATCCTGATACTTGCATTAT 59.985 37.037 0.00 0.00 32.78 1.28
491 492 6.321181 GGGTTCAAATCCTGATACTTGCATTA 59.679 38.462 0.00 0.00 32.78 1.90
492 493 5.127682 GGGTTCAAATCCTGATACTTGCATT 59.872 40.000 0.00 0.00 32.78 3.56
493 494 4.646492 GGGTTCAAATCCTGATACTTGCAT 59.354 41.667 0.00 0.00 32.78 3.96
494 495 4.016444 GGGTTCAAATCCTGATACTTGCA 58.984 43.478 0.00 0.00 32.78 4.08
495 496 4.273318 AGGGTTCAAATCCTGATACTTGC 58.727 43.478 0.00 0.00 38.36 4.01
504 505 3.677963 CCAGCAGGGTTCAAATCCT 57.322 52.632 0.00 0.00 41.23 3.24
516 517 3.694058 CTAGCCACCAGCCCAGCAG 62.694 68.421 0.00 0.00 45.47 4.24
517 518 3.720601 CTAGCCACCAGCCCAGCA 61.721 66.667 0.00 0.00 45.47 4.41
518 519 4.496336 CCTAGCCACCAGCCCAGC 62.496 72.222 0.00 0.00 45.47 4.85
519 520 3.801997 CCCTAGCCACCAGCCCAG 61.802 72.222 0.00 0.00 45.47 4.45
520 521 4.675303 ACCCTAGCCACCAGCCCA 62.675 66.667 0.00 0.00 45.47 5.36
521 522 2.441035 AAAACCCTAGCCACCAGCCC 62.441 60.000 0.00 0.00 45.47 5.19
522 523 1.076727 AAAACCCTAGCCACCAGCC 59.923 57.895 0.00 0.00 45.47 4.85
523 524 1.250840 CCAAAACCCTAGCCACCAGC 61.251 60.000 0.00 0.00 44.25 4.85
524 525 0.112412 ACCAAAACCCTAGCCACCAG 59.888 55.000 0.00 0.00 0.00 4.00
525 526 0.111639 GACCAAAACCCTAGCCACCA 59.888 55.000 0.00 0.00 0.00 4.17
526 527 0.958876 CGACCAAAACCCTAGCCACC 60.959 60.000 0.00 0.00 0.00 4.61
527 528 0.250597 ACGACCAAAACCCTAGCCAC 60.251 55.000 0.00 0.00 0.00 5.01
551 552 4.713824 TTTCGTGGAGATAGACGACAAT 57.286 40.909 0.00 0.00 43.91 2.71
553 554 3.668757 CGTTTTCGTGGAGATAGACGACA 60.669 47.826 0.00 0.00 43.91 4.35
574 575 2.896243 AGTACTAACTGACGCTCACG 57.104 50.000 0.00 0.00 39.05 4.35
590 591 6.535865 CCAAAATAGTACATACGGCAACAGTA 59.464 38.462 0.00 0.00 0.00 2.74
595 596 4.636648 CACCCAAAATAGTACATACGGCAA 59.363 41.667 0.00 0.00 0.00 4.52
730 753 0.877743 GCACCAGCTTCCAGAGAAAC 59.122 55.000 0.00 0.00 37.91 2.78
746 769 5.107065 GGGAACACAAAGCTATATATCGCAC 60.107 44.000 11.43 0.00 0.00 5.34
925 1143 7.885399 GCTGGATTAGATATCCATAAACCAAGT 59.115 37.037 12.11 0.00 46.12 3.16
975 1364 4.762251 GGATGGATGGCAGTATAAACTTCC 59.238 45.833 0.00 0.00 39.29 3.46
976 1365 4.762251 GGGATGGATGGCAGTATAAACTTC 59.238 45.833 0.00 0.00 31.97 3.01
986 1375 4.598036 ATTTATAGGGGATGGATGGCAG 57.402 45.455 0.00 0.00 0.00 4.85
988 1377 3.448660 GCAATTTATAGGGGATGGATGGC 59.551 47.826 0.00 0.00 0.00 4.40
989 1378 3.696051 CGCAATTTATAGGGGATGGATGG 59.304 47.826 0.00 0.00 0.00 3.51
990 1379 3.129287 GCGCAATTTATAGGGGATGGATG 59.871 47.826 0.30 0.00 0.00 3.51
991 1380 3.010584 AGCGCAATTTATAGGGGATGGAT 59.989 43.478 11.47 0.00 0.00 3.41
992 1381 2.375174 AGCGCAATTTATAGGGGATGGA 59.625 45.455 11.47 0.00 0.00 3.41
1053 1447 4.178255 CAACGCGCGCTAGTCACG 62.178 66.667 32.58 14.15 0.00 4.35
1054 1448 4.485208 GCAACGCGCGCTAGTCAC 62.485 66.667 32.58 12.03 0.00 3.67
1075 1475 1.754745 GCAGTGGAGTGGAGTGGAA 59.245 57.895 0.00 0.00 0.00 3.53
1608 2028 2.101575 GTCGATGTCGGCGTGCTA 59.898 61.111 6.85 0.00 40.29 3.49
1880 2440 0.886563 GCAACTTCCTTGAGCTGCAT 59.113 50.000 1.02 0.00 38.34 3.96
1965 2526 3.764466 CGCTCCTCGAACCCTGCT 61.764 66.667 0.00 0.00 41.67 4.24
2031 2592 0.804364 CGCTCTGGTGCTGCAAAATA 59.196 50.000 2.77 0.00 0.00 1.40
2136 2697 3.660501 AAAAAGAAAGGTTGATCGGCC 57.339 42.857 0.00 0.00 0.00 6.13
2183 2744 5.289595 GTTGATCGGCCTTTCTTTCTTTTT 58.710 37.500 0.00 0.00 0.00 1.94
2184 2745 4.262036 GGTTGATCGGCCTTTCTTTCTTTT 60.262 41.667 0.00 0.00 0.00 2.27
2185 2746 3.255888 GGTTGATCGGCCTTTCTTTCTTT 59.744 43.478 0.00 0.00 0.00 2.52
2186 2747 2.820197 GGTTGATCGGCCTTTCTTTCTT 59.180 45.455 0.00 0.00 0.00 2.52
2187 2748 2.040412 AGGTTGATCGGCCTTTCTTTCT 59.960 45.455 0.00 0.00 0.00 2.52
2188 2749 2.437413 AGGTTGATCGGCCTTTCTTTC 58.563 47.619 0.00 0.00 0.00 2.62
2189 2750 2.586648 AGGTTGATCGGCCTTTCTTT 57.413 45.000 0.00 0.00 0.00 2.52
2190 2751 2.586648 AAGGTTGATCGGCCTTTCTT 57.413 45.000 13.06 0.00 41.93 2.52
2194 2755 1.886542 GTTGAAAGGTTGATCGGCCTT 59.113 47.619 13.06 13.06 46.13 4.35
2195 2756 1.534729 GTTGAAAGGTTGATCGGCCT 58.465 50.000 0.00 2.38 36.51 5.19
2289 2850 2.984562 TGTGATATTTCTTGGCTCGCA 58.015 42.857 0.00 0.00 0.00 5.10
2290 2851 3.375299 AGTTGTGATATTTCTTGGCTCGC 59.625 43.478 0.00 0.00 0.00 5.03
2309 2870 2.746472 GCTTCCTGACCACTTGTGAGTT 60.746 50.000 1.89 0.00 32.54 3.01
2310 2871 1.202698 GCTTCCTGACCACTTGTGAGT 60.203 52.381 1.89 0.00 36.25 3.41
2311 2872 1.071385 AGCTTCCTGACCACTTGTGAG 59.929 52.381 1.89 0.00 0.00 3.51
2312 2873 1.131638 AGCTTCCTGACCACTTGTGA 58.868 50.000 1.89 0.00 0.00 3.58
2313 2874 1.972872 AAGCTTCCTGACCACTTGTG 58.027 50.000 0.00 0.00 0.00 3.33
2314 2875 3.679389 CATAAGCTTCCTGACCACTTGT 58.321 45.455 0.00 0.00 0.00 3.16
2315 2876 2.421424 GCATAAGCTTCCTGACCACTTG 59.579 50.000 0.00 0.00 37.91 3.16
2374 2935 3.255888 CCATAGCTAGCACCGATAACTCA 59.744 47.826 18.83 0.00 0.00 3.41
2402 2963 2.978824 CGACCCCGTCTCCAACAT 59.021 61.111 0.00 0.00 0.00 2.71
2412 2973 2.033194 GCTTTCCAAGACGACCCCG 61.033 63.158 0.00 0.00 42.50 5.73


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.