>input_sequence_74209
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-------------------------------CTATAAATTGCGCTTTCT--GCTAACCATCAAATCAATCACACGCAGAA
AACCTACGTGACTAG------CGCGCGTTGCATCTTCCACTCCACTCCACTGCGATGGCTTTTGCTTCTTCCTCTACAGA
ATCCCATGTCCTCCCTCACATAGCAATCTTCCCCTTCATGGCCAAGGGCCACACCATCCCGCTCATCCAGCTTGTCCACC
ACCTCCGTCGTCGCCGCCTCGCCACCGTCACCTTCTTCACAACCCATGGCAACGCCGCCTTCGTCCGCGAGGGACTGTCC
GGCGCCGACGACACGGCCGTCGTCGAGCTCGCGTTCCCCGCCGACGCCTCGGCAATCCCGCCTGGAGTGGAGAGCGCCGA
GGGGCTCACGTCCATGGCCTCCTTAGCCGCCTTCGCAGACGCCGTGT--------------CGCTGCTCCAGCCACAGCT
CGAGGCGTCGCTCGCCGCCATGGAGCCTCCGGCCAGCCTCCTCCTCGCCGACGCGTTCCTGTACTGGACGAACGCGTCGG
CGGCCACGGTCGGCGTCCCG------AAGGTGTCGTTCTTAGGCATCTCGGCGTTCGCACAGGTCATGCGGGAGCTGCGC
ATCAGCCACGATCCGCTCCCGGCGCTGTAG--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------
>chr5A_1_TraesCS5A01G532900
CTCATTATTTTAACTGACCAAGCTTTAGACTCTCTAGTTTTCTTTTTCTTTTTTGCGGAAATTTAGACTCTCTAGTTGAT
TTAGCTTCAGTGTACGAGTACAAGACTGATTACATGGTAACAGAAAAAAAAGGCCAAATACCAAATATATTTTGTGCTAA
CGTAGTACTGGCTTCTTCTTGGCTGCCATTTTATTGTGTGTTGGAGCTTTTTTTAAGTACACCACTACAGGGAGAAACCA
AGATATGTTGCTTCAAATGGTTAGGTTTTTTTTTTTGAATATTGGTACAGACGCAAGCGCTCATACATACGCACATACAC
TTACCCCTATGAACGCACACACGCACACCCTACCCCTATGAGCACCTCCGAGAGACTGAGACGGTATATTATCTTGAGAT
TTACGAAGTCACCGTAGGCGCCTCGTCGTCGACGGGAACATCTCCTCTCACTGAAAGCGCATCGTTGAAAATCCTGAAAT
AAATTCAGGAATAATGCAAGTATCAGGATTTGAACCCTGCTGGGCTGGTGGCTAGGGTTTTGGTCGTCTGCATTGTCGTC
TATCTCCACGAAAACGTGAGCGTCAGTTAGTACTGTTGCCGTA-----------TGTACTATTTTGGGTGATCACTGGAC
TAATGCACTATTTCCATAATACAGCTCTCTAC-ATGCTTATA----TTGGTATCTTCAAGATGACAAAAGATGCTCCCTG
TGTCCCCC-CACATCCAT-----TTTCCATGAGTTTCTCTGGAAGCTGGTGCGATAT-----------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------ATAG
CTTTGTGTTCCCAACATCCGAATATATTCTACCCG----ATATACAAACGACTAG--TCTCATTTTTATTTATATAAGCA
GTGGC---CATCAGTGAAATGCAGCCGTTCTAAACAAATTGAGAAGAAAAGTTTGATGCCTTA--CA--TC---TCTTTG
CTCTCACTTCTTTGGTATATATACTTGGTTT-------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------ATGGATATCTAATCCAGCTCCATGATTGAGCAGCC-------------GTT
GACGGAAGTTTATACTGCCATCCATCC---CCTATAAATTGCGCTTTCT--GCTAACCATCAAATCAATCACACGCAGAA
AACCTACGTGACTAG------CGCGCGTTGCATCTTCCACTCCACTCCACTGCGATGGCTTTTGCTTCTTCCTCTACAGA
ATCCCATGTCCTCCCTCACATAGCAATCTTCCCCTTCATGGCCAAGGGCCACACCATCCCGCTCATCCAGCTTGTCCACC
ACCTCCGTCGTCGCCGCCTCGCCACCGTCACCTTCTTCACAACCCATGGCAACGCCGCCTTCGTCCGCGAGGGACTGTCC
GGCGCCGACGACACGGCCGTCGTCGAGCTCGCGTTCCCCGCCGACGCCTCGGCAATCCCGCCTGGAGTGGAGAGCGCCGA
GGGGCTCACGTCCATGGCCTCCTTAGCCGCCTTCGCAGACGCCGTGT--------------CGCTGCTCCAGCCACAGCT
CGAGGCGTCGCTCGCCGCCATGGAGCCTCCGGCCAGCCTCCTCCTCGCCGACGCGTTCCTGTACTGGACGAACGCGTCGG
CGGCCACGGTCGGCGTCCCG------AAGGTGTCGTTCTTAGGCATCTCGGCGTTCGCACAGGTCATGCGGGAGCTGCGC
ATCAGCCACGATCCGCTCCCGGCGCTGTAGCACGCCGACATCGACGGCGACGGCAATCCGGCGACGTTCACGGTGCCTGA
GTTCCCGCACATCAAGCTCACGT---------------------------------------------------------
--------------------------------------------------------------------------------
ACATGGAGTTCTGGAACAAGCACTATAGGCCCACGGCCTGGGCCATCGGCCCGCTCTGCCTCTCCCAGCCCGCGTCTTCT
TCG---CCGGGTGACGCGCCGCCGGCCGGCCATCATGGATGGAGTGGCTGGACGAGAAGGCAGCCGCCGGCCGGGGCGTG
CTGTACGTCGCGTTCGGGACACTGGCCGCGATTCCAGAGATGCAGCTCAAGGAAGTTGCAGACGGGCTGGAGCGGGCCGA
GGTAGATTTCATATGGGCCGTGAGGCCGGAGAATAT-CATCTTGGAGCAGGGTTCGAGGAGCGTACCAAGGGCAGAGGCT
TAGTGGTGAGGGAGTGGGTGGATCAATTGGGTATTTTGCAGCACCAGAGCGTGAGAGGGTTTCTGAGCCACTGCGGGTGG
AACTCGGTGCTGGAGAGTGTCACGGCTGCTGTGCCACTGGCAGCTTGGCCCATGCAGGCCGATCAACCTTTCTTTTTTTT
TTTGCGGGTAAAAAAAAGAAAAAAAAAAGAAAGAAAGGCCGATCAACCTTTCAACGCAGCGTTTGCAGTCGATGAGCTCA
AGATCGCGGTTAGGGTCCACACGAGTGATAGAACGATGCGGGGTTTGGTTGCGAGCCAAGAAATATCACAACTCACAAGT
GGTCAGGAAGCTTATGCTCGGAGAGGTCGGAACTGAAGTGGCAAAGAATGTTGCTGAGTTATCGGTGCTAGCTATGGAGT
CCATGTTGGAGACGGGGTCGTCTTGGAAAGCAATGGAGGAGATGATCGGTGAGTTGTGTGCACCCAACA---TGCATGCA
AAGGTTGAGGCAAGCAAGGAGGAGTCGCGAGATGTTTAATTGTCATCG-TTTTTCTTTCAAACAAATAATATGGTGTTGT
GCTCTGTAGCTATATATACCAAACAT--------TTATGTTGGTCACTGGCATTTACTTCTCA
>chr4B_522
GGGCGG--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------TGGCTAGGGTTTTGGTCGTATGCCTGGTCCTC
TATCTCCACGAAAAGGTGAGTGTCGGTTAGCACTGCTGCCGTATATTACTAGTTTGAACTATTTTGGGTGATCACTGGAC
TAATGCACTATTTCCATAATACAGCTCTCTACCATGCTTAGA----TTGGTATCTTCAAGATGACAAAAGATGTTCCATG
TGTCCCCCCCAAATCCAT-----TTTCCATGACTTTATTTGGAAGCTGATGCGATAGCTTTCTGTTCCCAACATCCGAAT
ATATTCTACCCATAATATACGCTAGGGTTTCTACAATTTTGGATGATTACTCTGGAAGCTTATTAGATTGATATCTTCAA
AATGACAAAAGATGGTCCCTGTGTCCCCTCTCCCACATCCATTAATTTCCCATGACGTTCTCTGGAAGCTGATGCGATAG
CTTTGTGTTCCCAACATCCGAATATATTCTACCCGCCCGATATACAAACGACTAA--TCTCATCCAGCTCCATGATTGAG
--------------------------------AACAAATTGAGAACAAAAGATTGATGCCTCTTGCA--TC---TCTTTA
CTCTCACTTATTTGGTATA----CTTGGTTT-------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------ATGGATATCTAATCCAGCTCCATGATTGAGCAGCCAGCCTTGAGGAAAGTT
TATCCTACTATATATTTG---CCATCCCGGCCTATAAATTGCGCTTTCTTTGCTAACCATCAAATCAATCACACGGAGAA
AACCTATC-------------------------------CTCCACTCCACTGCGATGGCTTTTGCTTCTTCCTCTACAGA
ATCCCATGTCCTCCCTCACATAGCAATCTTCCCCTTCATGGCCAAGGGCCACACCATCCCGCTCATCCAGCTTGTCCACC
ACCTCCGTCGTCGCCGCCTCGCCACCGTGACCTTCTTCACAACCCATGCCAACGCCGCCTTCGTCCGCGAGGGACTGTCC
GGCGCCGACGACACGGCCGTCGTCGAGCTCGCGTTCCCCGCCGGCGTCGCGGCAATCCCGCCTGGGGTGGAGAGCGCCGA
GGGGCTCACGTCCATGGCCTCCTTAGCCGCCT--------------TCGCACGCGCCGCGTCGCTGCTCCAGCCACAGCT
CGAGGCGTCGCTCGCCGCCATGGAGCCTCCGGCCAGCCTCCTGGTCGCCGACGCGTTCCTGTACTGGACTAACGCGCCGG
CGGCCACGCTCGGCGTCCCGAG------GGTGTCGTTCTTAGGCATCTCGGCGTTCGCACAGGTCATGCGGGAGCTGCGC
GTCAGCCACGATCCGGTCCCGGCGCTGCAGCACGCCGACGTCGACGGCGACGGCAATCCGGCGACGTTCACGGTGCCTGA
GTTCCCGCACATCAAGCTCACGCTGGAGGACCTGATGGCGCCCTTCGGCGACCCGTCGTCGGCTGCTTCGATGATGGAGC
--TGCACGGCAAGCTGGCGAAGGCCATAGAGGAGAGCCATGGCCTGATCGTCAACACCTTCCAGGGCCTAGAGAAACCGT
ACATGGAGTTCTGGAACAGCCACTATAGGCCCACGGCCTGGGCCGTCGGCCCGCTCTGCCTCTCCCAGCCCGCGTCTTCT
TCG---CCGGGTGC--CGCCGGCGCCCGGCCATCATGGATGGAGTGGCTGGACGAGAAGGCAGCCGCCGGCCGGGGAGTG
CTGTACGTCGCGTTCGGGACGCTGGCCGCGATTCCAGAGGTGCAGCTCAAGGAAGTCGCAGACGGGCTGGAGCGGGCCGA
GGTAGATTTCATATGGGCCGTGAGGCCGGAGAATGTCCATCTCGGTGCAGGCTTCGAGGAGCGTACCAAGGGCAGAGGCT
TAGTGGTGAGGGAGTGGGTGGATCAATTGGGGATTTTGCGGCACCAGAGCGTGAGAGGGTTTCTGAGTCACTGCGGATGG
AACTCGGTGCTGGAGAGCGTCGCGGCTGCTGTGCCACTCGCAGCTTGGCCCATGCA------------------------
------------------------------------GGCCGATCAACCTTTCAACGCAGCGTTTGTAGCCGACGAGCTCA
AGATCGCGGTTAGGGTCCACACGAGTGATAGAACGATGCGGGGTCCGGTCACGAGCGAAGAAATATCGC-------GAGT
GGTCAGGGAGCTTATGCTCGGAGAGGCCGGAACCGAAGCGGCAAAGAATGTTGCCGAGTTATCGGTGCTGGCTATGGAGT
CCGTATTGGAGAGGGGGTCGTCGTGGAAAGCAATGGAGGAGATGATCGGTGAGTTGTGTGCACCCAACAGCATGCATGCA
AAGCTTGATGCGAGCAAGGAGGAGTCGCGAGATGTTTAATTGCCGTCG-TTTTTCTTTCAAAGAAATAATGTGGTGTTGT
ACTCTGTAGC----TATATATGCCAAACATTTAATTATGTTGGTCTCTGGCATTTACTTCTC-
>chrUn_522
GGGCGG--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------TGGCTAGGGTTTTGGTCGTCTGCGTGGTCCTC
TATCTCCACGAAAAGGTGAGCGTCAGTTAGCACTGCTGCCATATATTACTAGTTTGTACTATTTTGGGTGATCACTGGAC
TACTGCACTATTTCCATAATACAGCTCTCTAC-ATGCTTATA----TTGGTATCTTCAAGATGACAAAAGATGCTCCCTG
TGTCCCCCCCACATCCAT-----TTTCCATGCCTTTCTCTGGAAGCTGATGCGATAT-----------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------ATAG
CTTTGTGTTCCCAACATCCGAATATATTCTACCCG----ATATACAAACGACTAG--TCTCATTTTTATTTATATAAGCA
GTGGC---CATCAGTGAAATGCAGTCGTTCTAAAAAAATTGAGAACAAAAGTTTGATGCCTTA--CA--TC---TCTTTA
CTCTCACTTCTTTGGTATA----TATACTTGGTTTAAGGATATCTAATCGAAACTGCTATGCATACGATACTTTTTCGTC
GGACACCTATACGACCAGACTGTAAAATTTGTTGCATGGTGTGGCCCACAAACTGAATTATCTTGGGCTGTCTCTGATCG
TATGAATGTTGGATCGTCCGTATAGCAGGATTGATATCTAATCCAGCTCCATGATTGAGCAGCC----TTGACGAACGTT
TAC---ACTATATATTTG---CCATCC---CCTATAAATTGCGCTTTCT--GCTAACCATGAATCA---AACGCAG---A
AAACCTATCTGATCGACTAGTCGCGCGTTGCATCCTCCACTCCACTCCACTGCGATGGCTTTTGCTTCTTCCTCTACAGA
ATCCCATGTCCTCCCTCACATAGCAATCTTCCCCTTCATGGCCAAGGGCCACA-------------------------CC
ACCTCCGTCGTCGCCGCCTCGCCACCGTCACCTTCTTCGCAACCCATGGCAACGCCGCCTTCGTCCGCGAGGGACTGTCC
GGCGCCGACGACACGGCCGTCGTCGAGCTCGCGTTCCCCGCCGACGTCTCGGGAATCCCGCCTGGGGTGGAGAGCGCCGA
GGGGCTCACGTCCATGGCCTCCTTAGCCGCCT--------------T--------------CGCTGCTCCAGCCACAGCT
CGAGGCGTCGCTCGCCGCCATGGAGCCTCCGGCCAGCCTCCTCGTCGCCGACGCGTTCCTGTACTGGACGAACGCGTCGG
CGGCCACGCTCGGCGTCCCGAAGCCGAAGGTGTCGTTCTTAGGCATCTCGGCGTTCACACAGGTACTGCGGGAGGTGCGC
ATCAGCCACGACCCGTTCCCGGCGCTGCAGCACGCCGACGTCGACGGCGACGGCAATCCGGCGACGTTCACGGTGCCTGA
GTTCCCGCACATCAAGCTCACGTTGGAGGACATGATGGCGCCCTTGGGCGATCCGTCGTCGGTTGCGCCCATGATGGAGC
TGTGCACGGCAAGCTGGCGAAGGCCATAGAGGAGGGCCATGGCCTGATCGTCAACACCTTCCAAGGCCTAGAGAAACCGT
AC------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------CAAGGACAGAGGCT
TAGTGGTGAGGGAGTGGGTGGATCAATTGGGGATTTT-----------GCGTGAGAGGGTTTCTGAGTCACTGCGGGTGG
AACTCGGTGCTGGAGAGCGTCACGGCTGCTGTGTCACTGGCAGCTTGGCCCATGCA------------------------
------------------------------------GGCCGATCAACCTTTCAACGCAGCGTTTGCAGTCGATGAG----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------GCAAGCAAGGAGGAGCCGCGAGACGTTTAATTGTCATCA-TTTTTCTTTCAAACTAATAATGTGGTGTTGT
GCTCTGTAGC----TATACCAAACAT--------TTATGTTGGTCACTGGCATTTACTTCTCA
>chr5B_523
-GGCGG--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------TGGCTAGGGTTTTGGTCGTCTGCCCGGTCCTG
CATCTCCATGAAAAGGTGAGCGTCAGTTAGCACTGCTGCCGTACATTACTAGTTTGTACTGTTTTGGGTGATCA-----C
TACTGCACTTTTTCCATAATACAGCTCTCTAC-ATGCTTAGA----TTGGTATCTTCAAGATGACAAAAGATGTTCCATG
TGTCCCCC-CAAATCCAT-----TTTCCATGACTTTCTTTGGAAGCTGA-------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------TGCGATAG
CTTTGTGTTCCCAACATCCGAATATATTCTACC-ATA--ATATACAAACGACTAA--TCTCATTTTTATTTATGG----G
GTGGCCATCATCAGTGAAATGCAGCCATTCTAAACAAATTGTGAACAGATCATTGATGCCTTA--CAGCTC---TCTTTA
CTCTCACCTCTTTGGTATA----TTTGGTTT-------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------ATCGATATCTAACCCAGCTCCATGATTGAGCAGAG----TTGACGAAAGTT
TAT---ATTTG--------------------CTATAAATTGTGCCTGCT--GCTAACCATGAATCA---CACGCAG---A
AAACCCTCTGACTAG------CTTGTGTTGCAC------C----CTCCACTGCGATGGCTTTTGCTTCTTCCTCCACGGA
ATCCCATGTCCTCCCTCACATAGCAATCTTCCCCTTCATGGCCAAGGGCCACACCATCCCGCTCATCCAGCTTGTCCACC
ACCTCCATCGTCGCCGCCTGGCCACCGTGACCTTCTTCACAACCCATGGCAACGCAGCCTTCGTCCGCGAGGGACTGTCC
GGGGCCGACGACACGGCCATCGTCGAGCTCGTGTTCCCCGCCGACGTTTCGGGCGTCCCGCCGGGCGTGGAGAGCGCCGA
GGCGGTCACGTCCATGGCCTCCTTTGTCGCCTTCGCACACGGCGTGT--------------CGCTGCTCCAGCCACAGCT
CGAGGCGTCGCTCGCCGCCATGGAACCTCCGGCCAGCCTCCTCGTCGCCGACGCGTTCCTGTACTGGACGAACGAGTCGG
CGGCCACGCTCGGCGTCCCGAAG------GTGTCGTTCTTCGGCATCTCGGCGTTCGCACAGGTCATGAGGGAGCTGCGC
ATCAGCCACGACCCGTGCCCGGCGCTGCAGCTCGCCGACGTCGACGGCGACGGCAATCCGGCGACGTTCACGGTGCCTGA
GTTCCCGCACATCAAGCTCACGTTGGAGGACTTGATGGCGCCCTTCGGCGACCCGTCGTCGGTCGCGCCGATGATGGAGC
--TGGACAGCAAGCTGGGGAAGGCCATAGTGGAGAGCCATGGCCTGATCGTCAACACCTTCCAAGGCCTAGAGAAACCGT
ACATGGAGTTCTGGAACAAGCACTATAGGCCCACGGCCTGGGCCATCGGCCCGCTCTGCCTCTCCCAGACCGCGTCTTCT
TCG---TCGG-----GTGACGCCGGCCGGCCATCATGGATGGAGTGGCTGGACGAGAAGGCAGCCGCCGGCCGGGCCGTG
CTGTACGTCGCGCTCGGGACGCTGGCCGCGATACCAGAGGTGCAGCTGAAGGAAGTTGCAGACGGGCTGGAGCGGGCCGA
GGTAGATTTCATATGGGCCGTGAGGCCCGATAATATCGATCTTGGTGCAGGGTTCGAGGAGCGTACCAAGGACAGAGGCT
TAGTGGTGAGGGAATGGGTGGACCAATTGGGAATTTTGCAGCACCAGAGCGTGAGAGGGTTTCTGAGTCACTGCGGGTGG
AACTCGGTGCTAGAGAGTGTTGCAGCTGGCGTGCCACTGGCAGTTTGGCCCATGCA------------------------
------------------------------------TGCTGATCAACCTTTCAATGCAGCGTTTGTAGTCGATGAGCTCA
AGATCGCGGTTAGGGTCCACACGAGTGATAGAACGATGCGGGGTTTGGCCACAACCGAGGAAATATCGG-------AAGT
GGTCAGGAAGCTTATGCTCGGGGAGGCCGGAATTGAAGCGGCAAAGAATGTTGCCGGGCTATCGGTGCTAGCTGTGGAGT
CCGTACTGAAGGGAGGGTCCTCTTGGAAATCAGTGGAGGAGATGATCAGTGAGTTGTGTGCACCCAACA---TGCATGCA
AATGTTGAGCCAAGCAAGGAGGAGTCTTGAGATGTTTAATTGTCATCA-TTTTTCTTTCCAACAAATAATGCGGTGTTGT
GCTCTGTAGC----TATACCAAACAT--------TTATGTTGGTCACTGGCATTACTTCTCA-
>chr5A_605
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------GTACTATTTTGGGTGATCACTGGAC
TACTGCACTATTTCCATAATACAGCTCTCTAC-ATGCTTAGATTAATTGGTATCTTCAAGATGACAAAAGATGTTCCATG
TGTCCCCC-CAAATCCCATTTAATTTCCATGACTTTCCTTGGAAGCTGA-------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------TGCGATAG
CTTTGTGTTTCCAACGTCCGAATATATTCTACCCATA--ATATACAAACGACTAGTCTCTCATTTTTATTTATGG----A
GTGGC---CATCAGTGAGATGCAGCCATTCTAAACAAACTGAGAACAGAAGATTGATGCCTTA--CA--TCATATCTTTA
CTCTCACTTCTTTGGTATA----CTTGGTTT-------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------ATGGATATCTAACCCAGCTCCATGATTGAGCAGTC-------------GTT
GACCAAAGTTTATATTTG---CTATCC---CCTATAAATTGTGCTTTCT--GCTAACCATCAATCA---CACACGCAGAA
AAACTCTCTGACTAG------AGCGCGTTGCATCCGCATC----CTCTACTGCGATGGCTTTTGCTTCTTCCTCTACGGA
ATCCCATGTCCTCCCTCACATAGCAATCTTCCCCTTCATGGCCAGGGGCCACACCATCCCGCTCATCCAGCTTGTCCACC
ACCTCCGTCGTCGCCGCCTCGCCACCGTCACCTTCTTCACAACCCATGGCAACGCGGCCTTCGTCCGCGAGGGACTGTCC
GGGGCCGACGAGACGGCCATCGTCGAGCTCGCGTTCCCCGCCGACGTTTCGGGCATCCCACCGGGCGTGGAGAGCGCCGA
GGCGGTCACGTCCATGGCCTCCTTTGTCGCCTTCGCACACGGCGTGT--------------CGCTGCTCCAGCCACAGCT
CGAGGCGTCGCTCTCCGCCATGGAACCTCCGGCCAGCCTCCTCATCGCCGACGCGTTCCTGTACTGGACGAACGCGTCGG
CGGCCACGCTCGGCGTCCCGAAG------GTGTCGTTCTTCGGCATCTCTGCGTTCGCACAGGTCATGCGGGAGCTACGC
ATCAGCCACGATCCGTTCCCGGCGCTGCAGCACGCCGACGTCGACGGCGACGGCAATCCGGCGACGTTCGCGGTGCCTGA
GTTCCCGCACATCAAGCTCACGTTGGAGGACTTGATGGCGCCCTTCGGCGACCCGTCGTCGGTCGCGCCGATGATGGAGC
--TGGACGGCAAGCTGGGGAAGGCCATAGAGGAGAGCCATGGCCTGATCGTCAACACCTTCCAAGGCCTAGAGAAACCGT
ACATGGAGTTCTGGAACAAGCACTACAGGCCCACGGCCTGGGCCATCGG-CCGCTCTGCCTCTCCCAGCCCCCGTCTTCT
TT---ATCGG-----GCGACGCCGGCCGGCCATCATGGATGGAGTGGCTGGACGAGAAGGCAGCCGCCGGCCGGGCCGTG
CTGTACGTGGCGCTCGGGACGCTGGCCGCGATCCCGGAGGTGCAGCTGAAGGAAGTTGCAGACGGGCTGGAGCGGGCCGA
GGTAGATTTCATATGGGCCGTGAGGCCCGAGAATATCGATCTTGGTGCAGGGTTCGAGGAGCGTACCAAGGGCAGAGGCT
TGGTGGTGAGAGAGTAGGTGGATCAATTGGGGATTTTGCAGCACCAGAGCATGAGAGGGTTTCTGAGTCACTGCGGGTGG
AACTCGGTGCTGGAGAGCGTCACAGCTGCTGTGCCGCTGGCAGTTTGGCCTATGCA------------------------
------------------------------------TGCTGATCAACCTTTGAACGCAACATTTGTAGTTGATGAGCTCA
AGATAGCGGTTAGGGTCCACACGAGTGATAGAACGATGCGGGGTTTGGCCACGAGCGAGGAAATATCAG-------AGGT
GGTCAGGAAGCTTATGCTCGGGCAGGCCGGAATTGAAGCGGCAAAGAATGTTGCCGGGCTATCGGCGCTAGCTATGGAGT
CCGTGTTGGAGGGAGGGTCCTCTTGGAAATCAGTGGAGGAGATGATCGGTGAGTTGTGTGCACCCAACA---TGCATGCA
AATGTTGAGCCAAGCAAGGAGGAGTCTTGAGATGTTTAATTGTCATCGTTTTTTCTTTCCAACAAATAATGTGGTGTTGT
GCTCTGTAGC----TCTACCAAACAT--------TTATGTTGGTCACTGGCATTTGCTTCTCA
>chr5D_607
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------ACTGTTTTGGGTGATCACTGGAC
TATTGCACTATTTCCATAATACAGCTCTCTAC-ATGCTTAGATT----GGTATCTTCAAGATGACAAAAGATGTTCCATG
TGTCCCCC-CAAATCCAT-----TTTCCATGACTTTCTGTGGAAGCTGA-------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------TGCGATAG
CTTTGTGTTCCCAATATCCGAATATATTCTACCCATA--ATATACAAACGACTAA--TCTCATTTTTATTTATTG----G
GTGGC---CATCAGTGAAATGCAGCCATTCTAAACAAATAGTGAACAGATCATTGATGCCTTA--CA--GC---TCTTTA
CTCTCACTTCTTTGGTATA----TTTGGTTT-------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------ATCGATATCTAACCCAGCTCCATGATTGAGCATAG----TTGACGAAAGTT
TAC---ATTTG--------------------CTATAAATTGTGCCTGCT--GCTAACCATGAATCA---CACGCAG---A
AAACCCTCTGACTAG------CTTGCGTTGCAC------C----CTCCACTGCGATGGCTGTTGCTTCTTCCTCCACGGA
ATCCCATGTCCTCCCTCACATAGCAATCTTCCCCTTCATGGCCAAGGGCCACACCATCCCGCTCATCCAGCTTGTCCACC
ACCTCCGTCGTCGCGGCCTCGCCACCGTCACCTTCTTCACAACTCATGGCAACGCGGCCTTTGTCCGCGAGGGACTGTCC
GGGGCCGACGACACGGCCATCATCGAGCTCGCGTTCCCCGCCGACGTTTCGGGCGTCCCGCCGGGCGTGGAGAGCGCCGA
GGCGGTCACGTCCATGGCCTCCTTTGTCGCCTTCGCACACGGCGTGT--------------CGCTGCTCCAGCCACAGCT
CGAGGCGTCGCTCGCCGCCATGGAACCTCCGGCCAGCCTCCTCGTCGCCGACGCGTTCCTGTACTGGACGAACGCGTCGG
CGGCCACGCTCGGCGTCCCGAAG------GTGTCGTTCTTTGGCATCTCGGCGTTCGCACAGGTCATGCGGGAGCTGCGC
ATCACCCACGACCCGTGCCCGGCGCTGCAGCACGCCGACTTCGACGGCGACGGCAATCCGGCGACGTTCACGGTGCCTGA
GTTCCCGCACATCAAGCTCACCTTCGAGGACTTGATGGCGCCCTTCGGCGACCCGTCGTCGGTCGCGCCGATGATGGAGC
--TGGACGGCAAGCTGGGGAAGGCCATAGAGGAGAGCCATGGCCTGATCGTCAACACCTTCCAAGGCCTAGAGAGCCCGT
ACATGGAGTTCTGGAACAAGCACTACGGGCCAACGGCCTGGGCCATCGGCCCGCTCTGCCTCTCGCAGCCCCCGTCTTCT
TCTTCATCGG-----GCAACGCCGACCGGCCATCATGGATGGAGTGGCTGGATGGGAAGGCAGCCGCCGGCCGGGCCGTG
CTGTACGTCGCGCTCGGGACGCTGGCCGCGATCCCAGAGGTGCAGCTGAAGGAAGTTGCAGACGGGCTGGAGCGGGCCGA
GGTAGATTTCATATGGGCCGTGAGGCCCGATAATATCGATCTTGGTGCAGGGTTCGAGGAGCGTACCAAGGACAGAGGCT
TGGTGGTGAGAGAGTGGGTGGATCAATTGGGGATTTTGCAGCACGAGAGCGTGAGAGGGTTTCTCAGTCACTGCGGGTGG
AACTCGGTGCTGGAGAGCGTCACGGCTGCTGTGCCACTGGCAGTTTGGCCCATGCA------------------------
------------------------------------TGCCGATCAACCTTTCAACGCAGCGTTTGTAGTCGATGAGCTCA
AGATCGCGGTTAGGGTCCACACGAGTGATAGAACGATGCGGGGTTTGGTCACGAGCCAGGAAATATCAG-------AAGT
GGTCAGGAAGCTTATGCTCGGAGAGGTCGGAACGGAAGCGGCAAAGAATGTTGCCGAGTTATCGATGGTAGCTATGGAGT
CCGTATTGGAGAGAGGGTCTTCTTGGAGAGCAGTGGAGGAGATGATCGGTGAGCTGTGTGCACCCAACA---TGCATGCG
AATGTTGAGCCAAGCAAGGAGGAGTCTTGAAATGTTTAATTGTCATCGTT-TTTCTTTTCAACAAATAATGTGGTGTTGT
GCTCTGTAGC----TATACCAAACAT--------TTATGTTGGTCACTGGCATTTACTTCTCA
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------------S-S---S--
--------------S---------------S----S--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------S---------------S-------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------S---------------------------------S
-------------------SSSS---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---SS---------S-SSSSS-----------------------------------------------------------
------SS--------------------------S---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------S------------------S--------------
-------------------------------------S---S--------------------------------------
-------------------------------------------S------------------------------------
--------S-----------------------------------------------------------------------
---------------S-----------S-----------S----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------SS-----------------------------------------------------------------
--------------------S------------------S----------------------------------------
---------------------------------------------S----------------------------------
-------------------------------S-----------------------------------S------------
--------------------------------------------------------SSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------------------------------------
-------------------------------------------------SS------------------SSSSSSS----
--------------------------------------S---------------S-------------------------
--S---------S-------------------------------------------------------------------
----------------------------------------------------------------------S---------
----------SSSS-------------------------------------------------
>forward_377
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------ATGAGCACCTCCGAGAGACT-----------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------------------------
>reverse_2592
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------TATTTTGCAGCACCAGAGCG-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------
