Multiple sequence alignment - TraesCS5A01G510000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G510000 chr5A 100.000 2786 0 0 1 2786 673771921 673774706 0.000000e+00 5145
1 TraesCS5A01G510000 chr5A 97.987 149 3 0 1 149 375823987 375823839 2.750000e-65 259
2 TraesCS5A01G510000 chr4D 92.988 1968 86 11 853 2786 494266895 494268844 0.000000e+00 2822
3 TraesCS5A01G510000 chr4B 90.872 1983 98 40 853 2785 633759761 633761710 0.000000e+00 2582
4 TraesCS5A01G510000 chr4A 94.620 539 14 4 1039 1562 494074157 494073619 0.000000e+00 821
5 TraesCS5A01G510000 chr4A 84.043 188 10 7 1134 1320 246254868 246255036 2.220000e-36 163
6 TraesCS5A01G510000 chr2B 92.878 337 9 4 1241 1562 109134267 109133931 2.510000e-130 475
7 TraesCS5A01G510000 chr6B 88.028 284 25 5 1810 2092 148519708 148519433 7.440000e-86 327
8 TraesCS5A01G510000 chr6B 86.972 284 26 7 1810 2092 148438167 148437894 2.690000e-80 309
9 TraesCS5A01G510000 chr5B 91.286 241 16 3 1320 1559 248767145 248767381 9.620000e-85 324
10 TraesCS5A01G510000 chr3A 97.959 147 2 1 1 146 466040673 466040527 1.280000e-63 254
11 TraesCS5A01G510000 chr3A 98.601 143 1 1 1 142 495121635 495121777 4.610000e-63 252
12 TraesCS5A01G510000 chr3A 97.260 146 4 0 1 146 449473334 449473479 5.960000e-62 248
13 TraesCS5A01G510000 chr3A 95.395 152 6 1 1 151 444898755 444898906 9.970000e-60 241
14 TraesCS5A01G510000 chr1A 97.959 147 2 1 1 146 364438585 364438439 1.280000e-63 254
15 TraesCS5A01G510000 chr1A 97.279 147 3 1 1 146 364384821 364384675 5.960000e-62 248
16 TraesCS5A01G510000 chr1A 97.887 142 3 0 1 142 59712517 59712658 2.140000e-61 246
17 TraesCS5A01G510000 chr6A 96.689 151 3 2 1 149 12480215 12480365 1.660000e-62 250


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G510000 chr5A 673771921 673774706 2785 False 5145 5145 100.000 1 2786 1 chr5A.!!$F1 2785
1 TraesCS5A01G510000 chr4D 494266895 494268844 1949 False 2822 2822 92.988 853 2786 1 chr4D.!!$F1 1933
2 TraesCS5A01G510000 chr4B 633759761 633761710 1949 False 2582 2582 90.872 853 2785 1 chr4B.!!$F1 1932
3 TraesCS5A01G510000 chr4A 494073619 494074157 538 True 821 821 94.620 1039 1562 1 chr4A.!!$R1 523

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
433 434 0.033642 GAGGGTCTGGTTATAGCCGC 59.966 60.0 0.75 0.0 38.32 6.53 F
791 792 0.250640 CACCTCCTGCTGCATATCCC 60.251 60.0 1.31 0.0 0.00 3.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1653 1715 0.171903 CCTGGGCTTCAGATTTTGCG 59.828 55.0 8.75 0.0 46.18 4.85 R
2741 2827 0.238553 GTGGCAAAAAGAGAGCGACC 59.761 55.0 0.00 0.0 31.91 4.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.363991 AAATAGAGGAGCTTGCCCTATG 57.636 45.455 0.00 0.00 33.36 2.23
22 23 2.478872 TAGAGGAGCTTGCCCTATGT 57.521 50.000 0.00 0.00 33.36 2.29
23 24 2.478872 AGAGGAGCTTGCCCTATGTA 57.521 50.000 0.00 0.00 33.36 2.29
24 25 2.764269 AGAGGAGCTTGCCCTATGTAA 58.236 47.619 0.00 0.00 33.36 2.41
25 26 2.703007 AGAGGAGCTTGCCCTATGTAAG 59.297 50.000 0.00 0.00 39.45 2.34
26 27 1.771255 AGGAGCTTGCCCTATGTAAGG 59.229 52.381 0.00 0.00 46.09 2.69
45 46 8.893563 TGTAAGGAAATGTAATCAAATCCCTT 57.106 30.769 0.00 0.00 34.79 3.95
46 47 9.983024 TGTAAGGAAATGTAATCAAATCCCTTA 57.017 29.630 0.00 0.00 34.79 2.69
65 66 8.950007 TCCCTTAAAAAGTTATCCAAATGAGT 57.050 30.769 0.00 0.00 0.00 3.41
66 67 8.802267 TCCCTTAAAAAGTTATCCAAATGAGTG 58.198 33.333 0.00 0.00 0.00 3.51
67 68 8.034804 CCCTTAAAAAGTTATCCAAATGAGTGG 58.965 37.037 0.00 0.00 40.33 4.00
68 69 8.585018 CCTTAAAAAGTTATCCAAATGAGTGGT 58.415 33.333 0.00 0.00 39.88 4.16
69 70 9.410556 CTTAAAAAGTTATCCAAATGAGTGGTG 57.589 33.333 0.00 0.00 39.88 4.17
70 71 5.391312 AAAGTTATCCAAATGAGTGGTGC 57.609 39.130 0.00 0.00 39.88 5.01
71 72 4.032960 AGTTATCCAAATGAGTGGTGCA 57.967 40.909 0.00 0.00 39.88 4.57
72 73 4.406456 AGTTATCCAAATGAGTGGTGCAA 58.594 39.130 0.00 0.00 39.88 4.08
73 74 4.460382 AGTTATCCAAATGAGTGGTGCAAG 59.540 41.667 0.00 0.00 39.88 4.01
74 75 1.619654 TCCAAATGAGTGGTGCAAGG 58.380 50.000 0.00 0.00 39.88 3.61
75 76 0.037975 CCAAATGAGTGGTGCAAGGC 60.038 55.000 0.00 0.00 33.63 4.35
76 77 0.675083 CAAATGAGTGGTGCAAGGCA 59.325 50.000 0.00 0.00 35.60 4.75
77 78 1.068895 CAAATGAGTGGTGCAAGGCAA 59.931 47.619 0.00 0.00 41.47 4.52
78 79 1.636148 AATGAGTGGTGCAAGGCAAT 58.364 45.000 0.00 0.00 41.47 3.56
79 80 2.512692 ATGAGTGGTGCAAGGCAATA 57.487 45.000 0.00 0.00 41.47 1.90
80 81 1.533625 TGAGTGGTGCAAGGCAATAC 58.466 50.000 0.00 0.00 41.47 1.89
81 82 1.202867 TGAGTGGTGCAAGGCAATACA 60.203 47.619 0.00 0.00 41.47 2.29
82 83 1.200020 GAGTGGTGCAAGGCAATACAC 59.800 52.381 11.54 11.54 41.47 2.90
86 87 2.442413 GGTGCAAGGCAATACACCTTA 58.558 47.619 10.07 0.00 45.90 2.69
87 88 3.023832 GGTGCAAGGCAATACACCTTAT 58.976 45.455 10.07 0.00 45.90 1.73
88 89 4.204012 GGTGCAAGGCAATACACCTTATA 58.796 43.478 10.07 0.00 45.90 0.98
89 90 4.827284 GGTGCAAGGCAATACACCTTATAT 59.173 41.667 10.07 0.00 45.90 0.86
90 91 5.301805 GGTGCAAGGCAATACACCTTATATT 59.698 40.000 10.07 0.00 45.90 1.28
91 92 6.183360 GGTGCAAGGCAATACACCTTATATTT 60.183 38.462 10.07 0.00 45.90 1.40
92 93 7.264947 GTGCAAGGCAATACACCTTATATTTT 58.735 34.615 0.00 0.00 45.90 1.82
93 94 7.222611 GTGCAAGGCAATACACCTTATATTTTG 59.777 37.037 0.00 0.00 45.90 2.44
94 95 7.123397 TGCAAGGCAATACACCTTATATTTTGA 59.877 33.333 0.00 0.00 45.90 2.69
95 96 7.978975 GCAAGGCAATACACCTTATATTTTGAA 59.021 33.333 0.00 0.00 45.90 2.69
96 97 9.301153 CAAGGCAATACACCTTATATTTTGAAC 57.699 33.333 0.00 0.00 45.90 3.18
97 98 8.823220 AGGCAATACACCTTATATTTTGAACT 57.177 30.769 0.00 0.00 31.87 3.01
98 99 9.255029 AGGCAATACACCTTATATTTTGAACTT 57.745 29.630 0.00 0.00 31.87 2.66
99 100 9.869757 GGCAATACACCTTATATTTTGAACTTT 57.130 29.630 0.00 0.00 0.00 2.66
139 140 3.650139 CGTTATATCAAGGAACGGAGGG 58.350 50.000 0.69 0.00 41.64 4.30
140 141 3.319972 CGTTATATCAAGGAACGGAGGGA 59.680 47.826 0.69 0.00 41.64 4.20
141 142 4.558898 CGTTATATCAAGGAACGGAGGGAG 60.559 50.000 0.69 0.00 41.64 4.30
142 143 2.840640 TATCAAGGAACGGAGGGAGA 57.159 50.000 0.00 0.00 0.00 3.71
143 144 1.952621 ATCAAGGAACGGAGGGAGAA 58.047 50.000 0.00 0.00 0.00 2.87
144 145 1.952621 TCAAGGAACGGAGGGAGAAT 58.047 50.000 0.00 0.00 0.00 2.40
145 146 3.110293 TCAAGGAACGGAGGGAGAATA 57.890 47.619 0.00 0.00 0.00 1.75
146 147 3.654273 TCAAGGAACGGAGGGAGAATAT 58.346 45.455 0.00 0.00 0.00 1.28
147 148 4.037927 TCAAGGAACGGAGGGAGAATATT 58.962 43.478 0.00 0.00 0.00 1.28
148 149 4.473559 TCAAGGAACGGAGGGAGAATATTT 59.526 41.667 0.00 0.00 0.00 1.40
149 150 5.664006 TCAAGGAACGGAGGGAGAATATTTA 59.336 40.000 0.00 0.00 0.00 1.40
150 151 6.157297 TCAAGGAACGGAGGGAGAATATTTAA 59.843 38.462 0.00 0.00 0.00 1.52
151 152 6.570654 AGGAACGGAGGGAGAATATTTAAA 57.429 37.500 0.00 0.00 0.00 1.52
152 153 6.354938 AGGAACGGAGGGAGAATATTTAAAC 58.645 40.000 0.00 0.00 0.00 2.01
153 154 6.069847 AGGAACGGAGGGAGAATATTTAAACA 60.070 38.462 0.00 0.00 0.00 2.83
154 155 6.600427 GGAACGGAGGGAGAATATTTAAACAA 59.400 38.462 0.00 0.00 0.00 2.83
155 156 7.121611 GGAACGGAGGGAGAATATTTAAACAAA 59.878 37.037 0.00 0.00 0.00 2.83
156 157 8.411991 AACGGAGGGAGAATATTTAAACAAAA 57.588 30.769 0.00 0.00 0.00 2.44
157 158 8.411991 ACGGAGGGAGAATATTTAAACAAAAA 57.588 30.769 0.00 0.00 0.00 1.94
158 159 8.520351 ACGGAGGGAGAATATTTAAACAAAAAG 58.480 33.333 0.00 0.00 0.00 2.27
159 160 7.973944 CGGAGGGAGAATATTTAAACAAAAAGG 59.026 37.037 0.00 0.00 0.00 3.11
160 161 8.258007 GGAGGGAGAATATTTAAACAAAAAGGG 58.742 37.037 0.00 0.00 0.00 3.95
161 162 8.966155 AGGGAGAATATTTAAACAAAAAGGGA 57.034 30.769 0.00 0.00 0.00 4.20
162 163 9.387397 AGGGAGAATATTTAAACAAAAAGGGAA 57.613 29.630 0.00 0.00 0.00 3.97
202 203 5.813080 AAAAACATAAGTGTCGATAGGGC 57.187 39.130 0.00 0.00 37.67 5.19
203 204 3.470645 AACATAAGTGTCGATAGGGCC 57.529 47.619 0.00 0.00 37.67 5.80
204 205 1.692519 ACATAAGTGTCGATAGGGCCC 59.307 52.381 16.46 16.46 31.41 5.80
205 206 1.691976 CATAAGTGTCGATAGGGCCCA 59.308 52.381 27.56 10.89 0.00 5.36
206 207 2.097110 TAAGTGTCGATAGGGCCCAT 57.903 50.000 27.56 15.81 0.00 4.00
207 208 1.213296 AAGTGTCGATAGGGCCCATT 58.787 50.000 27.56 11.05 0.00 3.16
208 209 1.213296 AGTGTCGATAGGGCCCATTT 58.787 50.000 27.56 7.88 0.00 2.32
209 210 2.404559 AGTGTCGATAGGGCCCATTTA 58.595 47.619 27.56 8.38 0.00 1.40
210 211 2.775384 AGTGTCGATAGGGCCCATTTAA 59.225 45.455 27.56 2.79 0.00 1.52
211 212 3.394606 AGTGTCGATAGGGCCCATTTAAT 59.605 43.478 27.56 9.02 0.00 1.40
212 213 3.502211 GTGTCGATAGGGCCCATTTAATG 59.498 47.826 27.56 6.79 0.00 1.90
213 214 3.137544 TGTCGATAGGGCCCATTTAATGT 59.862 43.478 27.56 2.06 0.00 2.71
214 215 3.502211 GTCGATAGGGCCCATTTAATGTG 59.498 47.826 27.56 3.34 0.00 3.21
215 216 2.819608 CGATAGGGCCCATTTAATGTGG 59.180 50.000 27.56 6.21 36.47 4.17
222 223 2.137810 CCATTTAATGTGGGGTCGGT 57.862 50.000 4.15 0.00 32.98 4.69
223 224 2.452505 CCATTTAATGTGGGGTCGGTT 58.547 47.619 4.15 0.00 32.98 4.44
224 225 2.165437 CCATTTAATGTGGGGTCGGTTG 59.835 50.000 4.15 0.00 32.98 3.77
225 226 1.912417 TTTAATGTGGGGTCGGTTGG 58.088 50.000 0.00 0.00 0.00 3.77
226 227 0.038455 TTAATGTGGGGTCGGTTGGG 59.962 55.000 0.00 0.00 0.00 4.12
227 228 2.487274 TAATGTGGGGTCGGTTGGGC 62.487 60.000 0.00 0.00 0.00 5.36
229 230 3.324108 GTGGGGTCGGTTGGGCTA 61.324 66.667 0.00 0.00 0.00 3.93
230 231 3.006728 TGGGGTCGGTTGGGCTAG 61.007 66.667 0.00 0.00 0.00 3.42
231 232 4.484872 GGGGTCGGTTGGGCTAGC 62.485 72.222 6.04 6.04 0.00 3.42
232 233 3.712907 GGGTCGGTTGGGCTAGCA 61.713 66.667 18.24 0.00 0.00 3.49
233 234 2.590092 GGTCGGTTGGGCTAGCAT 59.410 61.111 18.24 0.00 0.00 3.79
234 235 1.819632 GGTCGGTTGGGCTAGCATG 60.820 63.158 18.24 0.00 0.00 4.06
235 236 1.819632 GTCGGTTGGGCTAGCATGG 60.820 63.158 18.24 0.00 0.00 3.66
236 237 2.516930 CGGTTGGGCTAGCATGGG 60.517 66.667 18.24 0.00 0.00 4.00
237 238 2.834968 GGTTGGGCTAGCATGGGC 60.835 66.667 18.24 0.00 43.03 5.36
242 243 2.112718 GGCTAGCATGGGCCAGAG 59.887 66.667 18.24 8.53 46.84 3.35
243 244 2.446848 GGCTAGCATGGGCCAGAGA 61.447 63.158 18.24 0.00 46.84 3.10
244 245 1.227793 GCTAGCATGGGCCAGAGAC 60.228 63.158 13.78 0.54 42.56 3.36
245 246 1.068753 CTAGCATGGGCCAGAGACG 59.931 63.158 13.78 0.00 42.56 4.18
246 247 2.985512 CTAGCATGGGCCAGAGACGC 62.986 65.000 13.78 9.40 42.56 5.19
270 271 3.751246 CGTGTCCGGGCGTCCTTA 61.751 66.667 3.66 0.00 0.00 2.69
271 272 2.897972 GTGTCCGGGCGTCCTTAT 59.102 61.111 3.66 0.00 0.00 1.73
272 273 1.727511 CGTGTCCGGGCGTCCTTATA 61.728 60.000 3.66 0.00 0.00 0.98
273 274 0.677842 GTGTCCGGGCGTCCTTATAT 59.322 55.000 3.66 0.00 0.00 0.86
274 275 0.963962 TGTCCGGGCGTCCTTATATC 59.036 55.000 3.66 0.00 0.00 1.63
275 276 1.254954 GTCCGGGCGTCCTTATATCT 58.745 55.000 3.66 0.00 0.00 1.98
276 277 1.067776 GTCCGGGCGTCCTTATATCTG 60.068 57.143 3.66 0.00 0.00 2.90
277 278 0.389948 CCGGGCGTCCTTATATCTGC 60.390 60.000 3.66 0.00 0.00 4.26
278 279 0.389948 CGGGCGTCCTTATATCTGCC 60.390 60.000 3.66 0.00 41.72 4.85
279 280 3.534721 GGCGTCCTTATATCTGCCC 57.465 57.895 0.00 0.00 36.51 5.36
280 281 0.977395 GGCGTCCTTATATCTGCCCT 59.023 55.000 0.00 0.00 36.51 5.19
281 282 2.176889 GGCGTCCTTATATCTGCCCTA 58.823 52.381 0.00 0.00 36.51 3.53
282 283 2.166664 GGCGTCCTTATATCTGCCCTAG 59.833 54.545 0.00 0.00 36.51 3.02
283 284 3.090037 GCGTCCTTATATCTGCCCTAGA 58.910 50.000 0.00 0.00 40.37 2.43
292 293 1.352083 TCTGCCCTAGATATGGTGGC 58.648 55.000 0.00 0.00 42.49 5.01
293 294 1.132721 TCTGCCCTAGATATGGTGGCT 60.133 52.381 5.66 0.00 42.62 4.75
294 295 1.701847 CTGCCCTAGATATGGTGGCTT 59.298 52.381 5.66 0.00 42.62 4.35
295 296 1.421268 TGCCCTAGATATGGTGGCTTG 59.579 52.381 5.66 0.00 42.62 4.01
296 297 1.699634 GCCCTAGATATGGTGGCTTGA 59.300 52.381 0.00 0.00 39.05 3.02
297 298 2.307098 GCCCTAGATATGGTGGCTTGAT 59.693 50.000 0.00 0.00 39.05 2.57
298 299 3.519510 GCCCTAGATATGGTGGCTTGATA 59.480 47.826 0.00 0.00 39.05 2.15
299 300 4.164988 GCCCTAGATATGGTGGCTTGATAT 59.835 45.833 0.00 0.00 39.05 1.63
300 301 5.678583 CCCTAGATATGGTGGCTTGATATG 58.321 45.833 0.00 0.00 0.00 1.78
301 302 5.426509 CCCTAGATATGGTGGCTTGATATGA 59.573 44.000 0.00 0.00 0.00 2.15
302 303 6.407865 CCCTAGATATGGTGGCTTGATATGAG 60.408 46.154 0.00 0.00 0.00 2.90
303 304 5.432680 AGATATGGTGGCTTGATATGAGG 57.567 43.478 0.00 0.00 0.00 3.86
304 305 5.096521 AGATATGGTGGCTTGATATGAGGA 58.903 41.667 0.00 0.00 0.00 3.71
305 306 5.549228 AGATATGGTGGCTTGATATGAGGAA 59.451 40.000 0.00 0.00 0.00 3.36
306 307 4.736611 ATGGTGGCTTGATATGAGGAAT 57.263 40.909 0.00 0.00 0.00 3.01
307 308 3.824133 TGGTGGCTTGATATGAGGAATG 58.176 45.455 0.00 0.00 0.00 2.67
308 309 2.555757 GGTGGCTTGATATGAGGAATGC 59.444 50.000 0.00 0.00 0.00 3.56
309 310 2.555757 GTGGCTTGATATGAGGAATGCC 59.444 50.000 0.00 0.00 39.53 4.40
310 311 2.175284 TGGCTTGATATGAGGAATGCCA 59.825 45.455 0.00 0.00 45.51 4.92
311 312 2.818432 GGCTTGATATGAGGAATGCCAG 59.182 50.000 0.00 0.00 38.99 4.85
312 313 3.484407 GCTTGATATGAGGAATGCCAGT 58.516 45.455 0.00 0.00 36.29 4.00
313 314 3.501445 GCTTGATATGAGGAATGCCAGTC 59.499 47.826 0.00 0.00 36.29 3.51
314 315 4.711399 CTTGATATGAGGAATGCCAGTCA 58.289 43.478 0.00 0.00 36.29 3.41
315 316 4.347360 TGATATGAGGAATGCCAGTCAG 57.653 45.455 0.00 0.00 36.29 3.51
316 317 3.969312 TGATATGAGGAATGCCAGTCAGA 59.031 43.478 0.00 0.00 36.29 3.27
317 318 2.706339 ATGAGGAATGCCAGTCAGAC 57.294 50.000 0.00 0.00 36.29 3.51
318 319 0.615331 TGAGGAATGCCAGTCAGACC 59.385 55.000 0.00 0.00 36.29 3.85
319 320 0.460987 GAGGAATGCCAGTCAGACCG 60.461 60.000 0.00 0.00 36.29 4.79
320 321 0.904865 AGGAATGCCAGTCAGACCGA 60.905 55.000 0.00 0.00 36.29 4.69
321 322 0.460987 GGAATGCCAGTCAGACCGAG 60.461 60.000 0.00 0.00 0.00 4.63
322 323 1.078848 AATGCCAGTCAGACCGAGC 60.079 57.895 0.00 0.00 0.00 5.03
323 324 1.830587 AATGCCAGTCAGACCGAGCA 61.831 55.000 11.11 11.11 34.28 4.26
324 325 1.620739 ATGCCAGTCAGACCGAGCAT 61.621 55.000 14.05 14.05 36.18 3.79
325 326 1.078848 GCCAGTCAGACCGAGCATT 60.079 57.895 0.00 0.00 0.00 3.56
326 327 0.674895 GCCAGTCAGACCGAGCATTT 60.675 55.000 0.00 0.00 0.00 2.32
327 328 1.081892 CCAGTCAGACCGAGCATTTG 58.918 55.000 0.00 0.00 0.00 2.32
328 329 1.338105 CCAGTCAGACCGAGCATTTGA 60.338 52.381 0.00 0.00 0.00 2.69
329 330 1.998315 CAGTCAGACCGAGCATTTGAG 59.002 52.381 0.00 0.00 0.00 3.02
330 331 0.723981 GTCAGACCGAGCATTTGAGC 59.276 55.000 0.00 0.00 0.00 4.26
331 332 0.391661 TCAGACCGAGCATTTGAGCC 60.392 55.000 0.00 0.00 34.23 4.70
332 333 0.392193 CAGACCGAGCATTTGAGCCT 60.392 55.000 0.00 0.00 34.23 4.58
333 334 0.392193 AGACCGAGCATTTGAGCCTG 60.392 55.000 0.00 0.00 34.23 4.85
334 335 0.391661 GACCGAGCATTTGAGCCTGA 60.392 55.000 0.00 0.00 34.23 3.86
335 336 0.036732 ACCGAGCATTTGAGCCTGAA 59.963 50.000 0.00 0.00 34.23 3.02
336 337 1.167851 CCGAGCATTTGAGCCTGAAA 58.832 50.000 0.00 0.00 34.23 2.69
337 338 1.541147 CCGAGCATTTGAGCCTGAAAA 59.459 47.619 0.00 0.00 34.23 2.29
338 339 2.415090 CCGAGCATTTGAGCCTGAAAAG 60.415 50.000 0.00 0.00 34.23 2.27
339 340 2.415090 CGAGCATTTGAGCCTGAAAAGG 60.415 50.000 0.00 0.00 34.23 3.11
340 341 1.897802 AGCATTTGAGCCTGAAAAGGG 59.102 47.619 0.00 0.00 34.23 3.95
341 342 1.066645 GCATTTGAGCCTGAAAAGGGG 60.067 52.381 0.00 0.00 0.00 4.79
357 358 3.827634 GGCACCCGATTGGATGAC 58.172 61.111 0.00 0.00 37.49 3.06
358 359 2.180204 GGCACCCGATTGGATGACG 61.180 63.158 0.00 0.00 37.49 4.35
359 360 1.449601 GCACCCGATTGGATGACGT 60.450 57.895 0.00 0.00 37.49 4.34
360 361 1.024579 GCACCCGATTGGATGACGTT 61.025 55.000 0.00 0.00 37.49 3.99
361 362 1.448985 CACCCGATTGGATGACGTTT 58.551 50.000 0.00 0.00 37.49 3.60
362 363 1.810151 CACCCGATTGGATGACGTTTT 59.190 47.619 0.00 0.00 37.49 2.43
363 364 2.227865 CACCCGATTGGATGACGTTTTT 59.772 45.455 0.00 0.00 37.49 1.94
380 381 1.808411 TTTTCGTCCAGATGCTGACC 58.192 50.000 0.00 0.00 32.44 4.02
381 382 0.389817 TTTCGTCCAGATGCTGACCG 60.390 55.000 0.00 0.00 32.44 4.79
382 383 2.202797 CGTCCAGATGCTGACCGG 60.203 66.667 0.00 0.00 32.44 5.28
383 384 2.187946 GTCCAGATGCTGACCGGG 59.812 66.667 6.32 0.00 32.44 5.73
384 385 3.785859 TCCAGATGCTGACCGGGC 61.786 66.667 6.32 1.57 32.44 6.13
385 386 4.100084 CCAGATGCTGACCGGGCA 62.100 66.667 11.16 11.16 44.05 5.36
386 387 2.513204 CAGATGCTGACCGGGCAG 60.513 66.667 34.13 34.13 43.15 4.85
392 393 4.864334 CTGACCGGGCAGCCCATC 62.864 72.222 27.78 25.33 45.83 3.51
405 406 2.824041 CCATCCGGGCGTTTGAGG 60.824 66.667 0.00 0.00 0.00 3.86
406 407 3.508840 CATCCGGGCGTTTGAGGC 61.509 66.667 0.00 0.00 0.00 4.70
411 412 2.263540 GGGCGTTTGAGGCGAGTA 59.736 61.111 0.00 0.00 37.59 2.59
412 413 1.153429 GGGCGTTTGAGGCGAGTAT 60.153 57.895 0.00 0.00 37.59 2.12
413 414 1.429148 GGGCGTTTGAGGCGAGTATG 61.429 60.000 0.00 0.00 37.59 2.39
414 415 1.429148 GGCGTTTGAGGCGAGTATGG 61.429 60.000 0.00 0.00 0.00 2.74
415 416 0.459585 GCGTTTGAGGCGAGTATGGA 60.460 55.000 0.00 0.00 0.00 3.41
416 417 1.560923 CGTTTGAGGCGAGTATGGAG 58.439 55.000 0.00 0.00 0.00 3.86
417 418 1.802880 CGTTTGAGGCGAGTATGGAGG 60.803 57.143 0.00 0.00 0.00 4.30
418 419 0.830648 TTTGAGGCGAGTATGGAGGG 59.169 55.000 0.00 0.00 0.00 4.30
419 420 0.325296 TTGAGGCGAGTATGGAGGGT 60.325 55.000 0.00 0.00 0.00 4.34
420 421 0.755698 TGAGGCGAGTATGGAGGGTC 60.756 60.000 0.00 0.00 0.00 4.46
421 422 0.468400 GAGGCGAGTATGGAGGGTCT 60.468 60.000 0.00 0.00 0.00 3.85
422 423 0.757188 AGGCGAGTATGGAGGGTCTG 60.757 60.000 0.00 0.00 0.00 3.51
423 424 1.742768 GCGAGTATGGAGGGTCTGG 59.257 63.158 0.00 0.00 0.00 3.86
424 425 1.043673 GCGAGTATGGAGGGTCTGGT 61.044 60.000 0.00 0.00 0.00 4.00
425 426 1.486211 CGAGTATGGAGGGTCTGGTT 58.514 55.000 0.00 0.00 0.00 3.67
426 427 2.662866 CGAGTATGGAGGGTCTGGTTA 58.337 52.381 0.00 0.00 0.00 2.85
427 428 3.231818 CGAGTATGGAGGGTCTGGTTAT 58.768 50.000 0.00 0.00 0.00 1.89
428 429 4.404640 CGAGTATGGAGGGTCTGGTTATA 58.595 47.826 0.00 0.00 0.00 0.98
429 430 4.459685 CGAGTATGGAGGGTCTGGTTATAG 59.540 50.000 0.00 0.00 0.00 1.31
430 431 4.161102 AGTATGGAGGGTCTGGTTATAGC 58.839 47.826 0.00 0.00 0.00 2.97
431 432 1.802553 TGGAGGGTCTGGTTATAGCC 58.197 55.000 0.00 0.00 0.00 3.93
432 433 0.680061 GGAGGGTCTGGTTATAGCCG 59.320 60.000 0.75 0.00 38.32 5.52
433 434 0.033642 GAGGGTCTGGTTATAGCCGC 59.966 60.000 0.75 0.00 38.32 6.53
434 435 0.398664 AGGGTCTGGTTATAGCCGCT 60.399 55.000 0.00 0.00 38.32 5.52
435 436 0.033642 GGGTCTGGTTATAGCCGCTC 59.966 60.000 0.00 0.00 0.00 5.03
436 437 1.041437 GGTCTGGTTATAGCCGCTCT 58.959 55.000 0.00 0.00 0.00 4.09
437 438 1.413077 GGTCTGGTTATAGCCGCTCTT 59.587 52.381 0.00 0.00 0.00 2.85
438 439 2.626743 GGTCTGGTTATAGCCGCTCTTA 59.373 50.000 0.00 0.00 0.00 2.10
439 440 3.258622 GGTCTGGTTATAGCCGCTCTTAT 59.741 47.826 0.00 0.00 0.00 1.73
440 441 4.461781 GGTCTGGTTATAGCCGCTCTTATA 59.538 45.833 0.00 0.00 0.00 0.98
441 442 5.047519 GGTCTGGTTATAGCCGCTCTTATAA 60.048 44.000 0.00 0.00 0.00 0.98
442 443 6.351117 GGTCTGGTTATAGCCGCTCTTATAAT 60.351 42.308 0.00 0.00 0.00 1.28
443 444 6.531948 GTCTGGTTATAGCCGCTCTTATAATG 59.468 42.308 0.00 0.00 0.00 1.90
444 445 5.175859 TGGTTATAGCCGCTCTTATAATGC 58.824 41.667 0.00 0.00 0.00 3.56
445 446 4.571176 GGTTATAGCCGCTCTTATAATGCC 59.429 45.833 0.00 0.00 0.00 4.40
446 447 3.981071 ATAGCCGCTCTTATAATGCCA 57.019 42.857 0.00 0.00 0.00 4.92
447 448 2.638480 AGCCGCTCTTATAATGCCAA 57.362 45.000 0.00 0.00 0.00 4.52
448 449 2.222027 AGCCGCTCTTATAATGCCAAC 58.778 47.619 0.00 0.00 0.00 3.77
449 450 1.266989 GCCGCTCTTATAATGCCAACC 59.733 52.381 5.41 0.00 0.00 3.77
450 451 1.880027 CCGCTCTTATAATGCCAACCC 59.120 52.381 5.41 0.00 0.00 4.11
451 452 2.571212 CGCTCTTATAATGCCAACCCA 58.429 47.619 5.41 0.00 0.00 4.51
452 453 2.549754 CGCTCTTATAATGCCAACCCAG 59.450 50.000 5.41 0.00 0.00 4.45
453 454 3.744214 CGCTCTTATAATGCCAACCCAGA 60.744 47.826 5.41 0.00 0.00 3.86
454 455 3.817647 GCTCTTATAATGCCAACCCAGAG 59.182 47.826 0.00 0.00 0.00 3.35
455 456 4.392940 CTCTTATAATGCCAACCCAGAGG 58.607 47.826 0.00 0.00 40.04 3.69
469 470 3.669939 CCAGAGGGGGAAACATTACAT 57.330 47.619 0.00 0.00 0.00 2.29
470 471 3.290710 CCAGAGGGGGAAACATTACATG 58.709 50.000 0.00 0.00 0.00 3.21
471 472 3.053693 CCAGAGGGGGAAACATTACATGA 60.054 47.826 0.00 0.00 0.00 3.07
472 473 4.569653 CCAGAGGGGGAAACATTACATGAA 60.570 45.833 0.00 0.00 0.00 2.57
473 474 5.016173 CAGAGGGGGAAACATTACATGAAA 58.984 41.667 0.00 0.00 0.00 2.69
474 475 5.480073 CAGAGGGGGAAACATTACATGAAAA 59.520 40.000 0.00 0.00 0.00 2.29
475 476 6.155049 CAGAGGGGGAAACATTACATGAAAAT 59.845 38.462 0.00 0.00 0.00 1.82
476 477 6.155049 AGAGGGGGAAACATTACATGAAAATG 59.845 38.462 18.01 18.01 39.68 2.32
477 478 6.022315 AGGGGGAAACATTACATGAAAATGA 58.978 36.000 23.26 0.00 37.68 2.57
478 479 6.500049 AGGGGGAAACATTACATGAAAATGAA 59.500 34.615 23.26 1.55 37.68 2.57
479 480 6.593770 GGGGGAAACATTACATGAAAATGAAC 59.406 38.462 23.26 15.71 37.68 3.18
480 481 7.158021 GGGGAAACATTACATGAAAATGAACA 58.842 34.615 23.26 0.00 37.68 3.18
481 482 7.823799 GGGGAAACATTACATGAAAATGAACAT 59.176 33.333 23.26 11.52 37.68 2.71
482 483 9.218440 GGGAAACATTACATGAAAATGAACATT 57.782 29.630 23.26 15.13 37.68 2.71
519 520 5.982356 TGGAAACCATGTTTGAATGTTTCA 58.018 33.333 17.50 6.65 38.04 2.69
520 521 7.052873 ATGGAAACCATGTTTGAATGTTTCAA 58.947 30.769 17.50 10.62 43.39 2.69
558 559 8.617290 AAAAATACGAGATGTTAAGAAGGTGT 57.383 30.769 0.00 0.00 0.00 4.16
559 560 8.617290 AAAATACGAGATGTTAAGAAGGTGTT 57.383 30.769 0.00 0.00 0.00 3.32
560 561 8.617290 AAATACGAGATGTTAAGAAGGTGTTT 57.383 30.769 0.00 0.00 0.00 2.83
561 562 8.617290 AATACGAGATGTTAAGAAGGTGTTTT 57.383 30.769 0.00 0.00 0.00 2.43
562 563 9.715121 AATACGAGATGTTAAGAAGGTGTTTTA 57.285 29.630 0.00 0.00 0.00 1.52
563 564 9.886132 ATACGAGATGTTAAGAAGGTGTTTTAT 57.114 29.630 0.00 0.00 0.00 1.40
564 565 8.617290 ACGAGATGTTAAGAAGGTGTTTTATT 57.383 30.769 0.00 0.00 0.00 1.40
565 566 8.504005 ACGAGATGTTAAGAAGGTGTTTTATTG 58.496 33.333 0.00 0.00 0.00 1.90
566 567 7.481798 CGAGATGTTAAGAAGGTGTTTTATTGC 59.518 37.037 0.00 0.00 0.00 3.56
567 568 7.602753 AGATGTTAAGAAGGTGTTTTATTGCC 58.397 34.615 0.00 0.00 0.00 4.52
568 569 6.716934 TGTTAAGAAGGTGTTTTATTGCCA 57.283 33.333 0.00 0.00 0.00 4.92
569 570 7.296628 TGTTAAGAAGGTGTTTTATTGCCAT 57.703 32.000 0.00 0.00 0.00 4.40
570 571 8.410673 TGTTAAGAAGGTGTTTTATTGCCATA 57.589 30.769 0.00 0.00 0.00 2.74
571 572 9.030452 TGTTAAGAAGGTGTTTTATTGCCATAT 57.970 29.630 0.00 0.00 0.00 1.78
577 578 9.869757 GAAGGTGTTTTATTGCCATATAAAAGT 57.130 29.630 8.08 0.00 39.40 2.66
578 579 9.869757 AAGGTGTTTTATTGCCATATAAAAGTC 57.130 29.630 8.08 5.75 39.40 3.01
579 580 8.474831 AGGTGTTTTATTGCCATATAAAAGTCC 58.525 33.333 8.08 11.34 39.40 3.85
580 581 8.254508 GGTGTTTTATTGCCATATAAAAGTCCA 58.745 33.333 8.08 3.08 39.40 4.02
581 582 9.646427 GTGTTTTATTGCCATATAAAAGTCCAA 57.354 29.630 8.08 0.00 39.40 3.53
582 583 9.868277 TGTTTTATTGCCATATAAAAGTCCAAG 57.132 29.630 8.08 0.00 39.40 3.61
583 584 9.869757 GTTTTATTGCCATATAAAAGTCCAAGT 57.130 29.630 8.08 0.00 39.40 3.16
589 590 9.699703 TTGCCATATAAAAGTCCAAGTTAAAAC 57.300 29.630 0.00 0.00 0.00 2.43
590 591 8.861086 TGCCATATAAAAGTCCAAGTTAAAACA 58.139 29.630 0.00 0.00 0.00 2.83
591 592 9.869757 GCCATATAAAAGTCCAAGTTAAAACAT 57.130 29.630 0.00 0.00 0.00 2.71
598 599 9.902196 AAAAGTCCAAGTTAAAACATATTACGG 57.098 29.630 0.00 0.00 0.00 4.02
599 600 8.851541 AAGTCCAAGTTAAAACATATTACGGA 57.148 30.769 0.00 0.00 0.00 4.69
600 601 9.457436 AAGTCCAAGTTAAAACATATTACGGAT 57.543 29.630 0.00 0.00 0.00 4.18
601 602 8.889717 AGTCCAAGTTAAAACATATTACGGATG 58.110 33.333 0.00 0.00 0.00 3.51
602 603 7.642586 GTCCAAGTTAAAACATATTACGGATGC 59.357 37.037 0.00 0.00 0.00 3.91
603 604 6.631238 CCAAGTTAAAACATATTACGGATGCG 59.369 38.462 4.58 4.58 0.00 4.73
604 605 7.403421 CAAGTTAAAACATATTACGGATGCGA 58.597 34.615 15.49 0.00 0.00 5.10
605 606 7.173863 AGTTAAAACATATTACGGATGCGAG 57.826 36.000 15.49 0.00 0.00 5.03
606 607 4.468095 AAAACATATTACGGATGCGAGC 57.532 40.909 15.49 0.00 0.00 5.03
607 608 3.386768 AACATATTACGGATGCGAGCT 57.613 42.857 15.49 0.00 0.00 4.09
608 609 4.514781 AACATATTACGGATGCGAGCTA 57.485 40.909 15.49 1.34 0.00 3.32
609 610 4.098055 ACATATTACGGATGCGAGCTAG 57.902 45.455 15.49 0.84 0.00 3.42
610 611 3.756963 ACATATTACGGATGCGAGCTAGA 59.243 43.478 15.49 0.00 0.00 2.43
611 612 4.217767 ACATATTACGGATGCGAGCTAGAA 59.782 41.667 15.49 0.00 0.00 2.10
612 613 3.728076 ATTACGGATGCGAGCTAGAAA 57.272 42.857 15.49 0.00 0.00 2.52
613 614 3.513680 TTACGGATGCGAGCTAGAAAA 57.486 42.857 15.49 0.00 0.00 2.29
614 615 2.380084 ACGGATGCGAGCTAGAAAAA 57.620 45.000 15.49 0.00 0.00 1.94
635 636 7.571080 AAAAACAAATTCAGCAATGAATGGT 57.429 28.000 4.36 4.08 41.41 3.55
644 645 3.674997 AGCAATGAATGGTGACGTTACT 58.325 40.909 10.54 0.00 40.42 2.24
645 646 4.827692 AGCAATGAATGGTGACGTTACTA 58.172 39.130 10.54 4.51 40.42 1.82
646 647 5.428253 AGCAATGAATGGTGACGTTACTAT 58.572 37.500 10.54 6.98 40.42 2.12
647 648 5.880332 AGCAATGAATGGTGACGTTACTATT 59.120 36.000 19.60 19.60 40.42 1.73
648 649 6.374333 AGCAATGAATGGTGACGTTACTATTT 59.626 34.615 20.29 5.85 40.42 1.40
649 650 6.468956 GCAATGAATGGTGACGTTACTATTTG 59.531 38.462 20.29 15.98 40.42 2.32
650 651 6.677781 ATGAATGGTGACGTTACTATTTGG 57.322 37.500 20.29 0.00 40.42 3.28
651 652 4.393680 TGAATGGTGACGTTACTATTTGGC 59.606 41.667 20.29 10.49 40.42 4.52
652 653 3.404224 TGGTGACGTTACTATTTGGCA 57.596 42.857 10.54 0.00 0.00 4.92
653 654 3.331150 TGGTGACGTTACTATTTGGCAG 58.669 45.455 10.54 0.00 0.00 4.85
654 655 3.244284 TGGTGACGTTACTATTTGGCAGT 60.244 43.478 10.54 0.00 0.00 4.40
655 656 3.749609 GGTGACGTTACTATTTGGCAGTT 59.250 43.478 10.54 0.00 0.00 3.16
656 657 4.378046 GGTGACGTTACTATTTGGCAGTTG 60.378 45.833 10.54 0.00 0.00 3.16
657 658 3.749088 TGACGTTACTATTTGGCAGTTGG 59.251 43.478 0.00 0.00 0.00 3.77
658 659 2.486592 ACGTTACTATTTGGCAGTTGGC 59.513 45.455 0.00 0.00 43.74 4.52
666 667 2.141312 TGGCAGTTGGCACTAGTCA 58.859 52.632 4.06 0.00 46.12 3.41
667 668 0.692476 TGGCAGTTGGCACTAGTCAT 59.308 50.000 4.06 0.00 46.12 3.06
668 669 1.073763 TGGCAGTTGGCACTAGTCATT 59.926 47.619 4.06 0.00 46.12 2.57
669 670 2.907910 GCAGTTGGCACTAGTCATTG 57.092 50.000 0.00 0.00 43.97 2.82
670 671 2.154462 GCAGTTGGCACTAGTCATTGT 58.846 47.619 0.00 0.00 43.97 2.71
671 672 2.554032 GCAGTTGGCACTAGTCATTGTT 59.446 45.455 0.00 0.00 43.97 2.83
672 673 3.610114 GCAGTTGGCACTAGTCATTGTTG 60.610 47.826 0.00 0.00 43.97 3.33
673 674 3.565482 CAGTTGGCACTAGTCATTGTTGT 59.435 43.478 0.00 0.00 0.00 3.32
674 675 3.565482 AGTTGGCACTAGTCATTGTTGTG 59.435 43.478 0.00 0.00 0.00 3.33
675 676 3.207265 TGGCACTAGTCATTGTTGTGT 57.793 42.857 0.00 0.00 0.00 3.72
676 677 3.550820 TGGCACTAGTCATTGTTGTGTT 58.449 40.909 0.00 0.00 0.00 3.32
677 678 3.951037 TGGCACTAGTCATTGTTGTGTTT 59.049 39.130 0.00 0.00 0.00 2.83
678 679 4.202000 TGGCACTAGTCATTGTTGTGTTTG 60.202 41.667 0.00 0.00 0.00 2.93
679 680 4.036262 GGCACTAGTCATTGTTGTGTTTGA 59.964 41.667 0.00 0.00 0.00 2.69
680 681 4.970003 GCACTAGTCATTGTTGTGTTTGAC 59.030 41.667 0.00 0.00 38.97 3.18
681 682 5.510671 CACTAGTCATTGTTGTGTTTGACC 58.489 41.667 0.00 0.00 39.39 4.02
682 683 5.296780 CACTAGTCATTGTTGTGTTTGACCT 59.703 40.000 0.00 0.00 39.39 3.85
683 684 5.885912 ACTAGTCATTGTTGTGTTTGACCTT 59.114 36.000 0.00 0.00 39.39 3.50
684 685 4.997565 AGTCATTGTTGTGTTTGACCTTG 58.002 39.130 0.00 0.00 39.39 3.61
685 686 4.462483 AGTCATTGTTGTGTTTGACCTTGT 59.538 37.500 0.00 0.00 39.39 3.16
686 687 5.650266 AGTCATTGTTGTGTTTGACCTTGTA 59.350 36.000 0.00 0.00 39.39 2.41
687 688 6.151985 AGTCATTGTTGTGTTTGACCTTGTAA 59.848 34.615 0.00 0.00 39.39 2.41
688 689 6.978080 GTCATTGTTGTGTTTGACCTTGTAAT 59.022 34.615 0.00 0.00 33.91 1.89
689 690 7.491048 GTCATTGTTGTGTTTGACCTTGTAATT 59.509 33.333 0.00 0.00 33.91 1.40
690 691 8.037758 TCATTGTTGTGTTTGACCTTGTAATTT 58.962 29.630 0.00 0.00 0.00 1.82
691 692 7.820044 TTGTTGTGTTTGACCTTGTAATTTC 57.180 32.000 0.00 0.00 0.00 2.17
692 693 6.030849 TGTTGTGTTTGACCTTGTAATTTCG 58.969 36.000 0.00 0.00 0.00 3.46
693 694 4.602995 TGTGTTTGACCTTGTAATTTCGC 58.397 39.130 0.00 0.00 0.00 4.70
694 695 4.096532 TGTGTTTGACCTTGTAATTTCGCA 59.903 37.500 0.00 0.00 0.00 5.10
695 696 5.219633 GTGTTTGACCTTGTAATTTCGCAT 58.780 37.500 0.00 0.00 0.00 4.73
696 697 5.689961 GTGTTTGACCTTGTAATTTCGCATT 59.310 36.000 0.00 0.00 0.00 3.56
697 698 5.689514 TGTTTGACCTTGTAATTTCGCATTG 59.310 36.000 0.00 0.00 0.00 2.82
698 699 3.832276 TGACCTTGTAATTTCGCATTGC 58.168 40.909 0.00 0.00 0.00 3.56
699 700 3.254411 TGACCTTGTAATTTCGCATTGCA 59.746 39.130 9.69 0.00 0.00 4.08
700 701 3.836949 ACCTTGTAATTTCGCATTGCAG 58.163 40.909 9.69 1.90 0.00 4.41
701 702 3.255642 ACCTTGTAATTTCGCATTGCAGT 59.744 39.130 9.69 0.00 0.00 4.40
702 703 4.236935 CCTTGTAATTTCGCATTGCAGTT 58.763 39.130 9.69 0.32 0.00 3.16
703 704 4.685628 CCTTGTAATTTCGCATTGCAGTTT 59.314 37.500 9.69 0.00 0.00 2.66
704 705 5.164061 CCTTGTAATTTCGCATTGCAGTTTC 60.164 40.000 9.69 0.00 0.00 2.78
705 706 3.911365 TGTAATTTCGCATTGCAGTTTCG 59.089 39.130 9.69 0.00 0.00 3.46
706 707 2.704725 ATTTCGCATTGCAGTTTCGT 57.295 40.000 9.69 0.00 0.00 3.85
707 708 3.822594 ATTTCGCATTGCAGTTTCGTA 57.177 38.095 9.69 0.00 0.00 3.43
708 709 3.610786 TTTCGCATTGCAGTTTCGTAA 57.389 38.095 9.69 0.00 0.00 3.18
709 710 3.822594 TTCGCATTGCAGTTTCGTAAT 57.177 38.095 9.69 0.00 0.00 1.89
710 711 4.930463 TTCGCATTGCAGTTTCGTAATA 57.070 36.364 9.69 0.00 0.00 0.98
711 712 5.478233 TTCGCATTGCAGTTTCGTAATAT 57.522 34.783 9.69 0.00 0.00 1.28
712 713 5.478233 TCGCATTGCAGTTTCGTAATATT 57.522 34.783 9.69 0.00 0.00 1.28
713 714 5.874831 TCGCATTGCAGTTTCGTAATATTT 58.125 33.333 9.69 0.00 0.00 1.40
714 715 5.736824 TCGCATTGCAGTTTCGTAATATTTG 59.263 36.000 9.69 0.00 0.00 2.32
715 716 5.511377 CGCATTGCAGTTTCGTAATATTTGT 59.489 36.000 9.69 0.00 0.00 2.83
716 717 6.033407 CGCATTGCAGTTTCGTAATATTTGTT 59.967 34.615 9.69 0.00 0.00 2.83
717 718 7.410300 CGCATTGCAGTTTCGTAATATTTGTTT 60.410 33.333 9.69 0.00 0.00 2.83
718 719 7.683676 GCATTGCAGTTTCGTAATATTTGTTTG 59.316 33.333 3.15 0.00 0.00 2.93
719 720 6.683090 TGCAGTTTCGTAATATTTGTTTGC 57.317 33.333 0.00 0.00 0.00 3.68
720 721 6.209361 TGCAGTTTCGTAATATTTGTTTGCA 58.791 32.000 0.00 0.00 34.67 4.08
721 722 6.697455 TGCAGTTTCGTAATATTTGTTTGCAA 59.303 30.769 0.00 0.00 34.20 4.08
722 723 7.383572 TGCAGTTTCGTAATATTTGTTTGCAAT 59.616 29.630 0.00 0.00 34.20 3.56
723 724 8.220434 GCAGTTTCGTAATATTTGTTTGCAATT 58.780 29.630 0.00 0.00 34.18 2.32
724 725 9.726034 CAGTTTCGTAATATTTGTTTGCAATTC 57.274 29.630 0.00 0.00 34.18 2.17
725 726 9.469807 AGTTTCGTAATATTTGTTTGCAATTCA 57.530 25.926 0.00 0.00 34.18 2.57
726 727 9.511022 GTTTCGTAATATTTGTTTGCAATTCAC 57.489 29.630 0.00 0.00 34.18 3.18
727 728 9.469807 TTTCGTAATATTTGTTTGCAATTCACT 57.530 25.926 0.00 0.00 34.18 3.41
728 729 8.667987 TCGTAATATTTGTTTGCAATTCACTC 57.332 30.769 0.00 0.00 34.18 3.51
729 730 7.480229 TCGTAATATTTGTTTGCAATTCACTCG 59.520 33.333 0.00 0.00 34.18 4.18
730 731 6.949578 AATATTTGTTTGCAATTCACTCGG 57.050 33.333 0.00 0.00 34.18 4.63
731 732 2.132740 TTGTTTGCAATTCACTCGGC 57.867 45.000 0.00 0.00 0.00 5.54
732 733 1.028130 TGTTTGCAATTCACTCGGCA 58.972 45.000 0.00 0.00 0.00 5.69
733 734 1.612950 TGTTTGCAATTCACTCGGCAT 59.387 42.857 0.00 0.00 35.98 4.40
734 735 2.816672 TGTTTGCAATTCACTCGGCATA 59.183 40.909 0.00 0.00 35.98 3.14
735 736 3.443329 TGTTTGCAATTCACTCGGCATAT 59.557 39.130 0.00 0.00 35.98 1.78
736 737 3.969117 TTGCAATTCACTCGGCATATC 57.031 42.857 0.00 0.00 35.98 1.63
737 738 2.221169 TGCAATTCACTCGGCATATCC 58.779 47.619 0.00 0.00 0.00 2.59
762 763 1.862806 GCTATTCGCCGGAATCAGC 59.137 57.895 5.05 2.20 41.88 4.26
763 764 0.880278 GCTATTCGCCGGAATCAGCA 60.880 55.000 5.05 0.00 41.88 4.41
764 765 0.861837 CTATTCGCCGGAATCAGCAC 59.138 55.000 5.05 0.00 41.88 4.40
765 766 0.531974 TATTCGCCGGAATCAGCACC 60.532 55.000 5.05 0.00 41.88 5.01
766 767 2.257409 ATTCGCCGGAATCAGCACCT 62.257 55.000 5.05 0.00 38.51 4.00
767 768 2.852495 TTCGCCGGAATCAGCACCTC 62.852 60.000 5.05 0.00 0.00 3.85
768 769 2.892425 GCCGGAATCAGCACCTCG 60.892 66.667 5.05 0.00 0.00 4.63
769 770 2.892425 CCGGAATCAGCACCTCGC 60.892 66.667 0.00 0.00 42.91 5.03
770 771 2.892425 CGGAATCAGCACCTCGCC 60.892 66.667 0.00 0.00 44.04 5.54
771 772 2.892425 GGAATCAGCACCTCGCCG 60.892 66.667 0.00 0.00 44.04 6.46
772 773 3.567797 GAATCAGCACCTCGCCGC 61.568 66.667 0.00 0.00 44.04 6.53
773 774 4.393155 AATCAGCACCTCGCCGCA 62.393 61.111 0.00 0.00 44.04 5.69
786 787 4.790962 CCGCACCTCCTGCTGCAT 62.791 66.667 1.31 0.00 44.64 3.96
787 788 2.187685 CGCACCTCCTGCTGCATA 59.812 61.111 1.31 0.00 44.64 3.14
788 789 1.227764 CGCACCTCCTGCTGCATAT 60.228 57.895 1.31 0.00 44.64 1.78
789 790 1.226686 CGCACCTCCTGCTGCATATC 61.227 60.000 1.31 0.00 44.64 1.63
790 791 0.888285 GCACCTCCTGCTGCATATCC 60.888 60.000 1.31 0.00 43.33 2.59
791 792 0.250640 CACCTCCTGCTGCATATCCC 60.251 60.000 1.31 0.00 0.00 3.85
792 793 0.695462 ACCTCCTGCTGCATATCCCA 60.695 55.000 1.31 0.00 0.00 4.37
793 794 0.250640 CCTCCTGCTGCATATCCCAC 60.251 60.000 1.31 0.00 0.00 4.61
794 795 0.602106 CTCCTGCTGCATATCCCACG 60.602 60.000 1.31 0.00 0.00 4.94
795 796 2.256591 CCTGCTGCATATCCCACGC 61.257 63.158 1.31 0.00 0.00 5.34
796 797 2.588596 TGCTGCATATCCCACGCG 60.589 61.111 3.53 3.53 0.00 6.01
797 798 3.349006 GCTGCATATCCCACGCGG 61.349 66.667 12.47 0.00 35.06 6.46
798 799 3.349006 CTGCATATCCCACGCGGC 61.349 66.667 12.47 1.15 0.00 6.53
800 801 4.961511 GCATATCCCACGCGGCGA 62.962 66.667 30.94 6.68 0.00 5.54
801 802 2.048222 CATATCCCACGCGGCGAT 60.048 61.111 30.94 14.39 0.00 4.58
802 803 1.667830 CATATCCCACGCGGCGATT 60.668 57.895 30.94 4.11 0.00 3.34
803 804 1.374252 ATATCCCACGCGGCGATTC 60.374 57.895 30.94 0.00 0.00 2.52
804 805 3.834447 TATCCCACGCGGCGATTCG 62.834 63.158 30.94 13.51 0.00 3.34
808 809 3.261951 CACGCGGCGATTCGGAAT 61.262 61.111 30.94 2.19 0.00 3.01
809 810 2.960129 ACGCGGCGATTCGGAATC 60.960 61.111 30.94 18.61 34.52 2.52
810 811 2.959599 CGCGGCGATTCGGAATCA 60.960 61.111 25.63 0.00 37.78 2.57
811 812 2.931386 GCGGCGATTCGGAATCAG 59.069 61.111 25.63 19.45 37.78 2.90
812 813 2.931386 CGGCGATTCGGAATCAGC 59.069 61.111 25.63 25.53 37.78 4.26
813 814 1.882625 CGGCGATTCGGAATCAGCA 60.883 57.895 29.88 0.00 38.36 4.41
814 815 1.224069 CGGCGATTCGGAATCAGCAT 61.224 55.000 29.88 4.86 38.36 3.79
815 816 0.514691 GGCGATTCGGAATCAGCATC 59.485 55.000 29.88 19.13 38.36 3.91
816 817 0.514691 GCGATTCGGAATCAGCATCC 59.485 55.000 27.02 10.48 37.78 3.51
821 822 4.464262 GGAATCAGCATCCGGACC 57.536 61.111 6.12 0.00 0.00 4.46
822 823 1.595382 GGAATCAGCATCCGGACCG 60.595 63.158 6.12 6.99 0.00 4.79
843 844 2.368591 CCCAACGGGTCAACCTAGA 58.631 57.895 0.00 0.00 38.25 2.43
844 845 0.688487 CCCAACGGGTCAACCTAGAA 59.312 55.000 0.00 0.00 38.25 2.10
845 846 1.072648 CCCAACGGGTCAACCTAGAAA 59.927 52.381 0.00 0.00 38.25 2.52
846 847 2.487625 CCCAACGGGTCAACCTAGAAAA 60.488 50.000 0.00 0.00 38.25 2.29
847 848 3.418047 CCAACGGGTCAACCTAGAAAAT 58.582 45.455 0.00 0.00 36.97 1.82
848 849 3.439129 CCAACGGGTCAACCTAGAAAATC 59.561 47.826 0.00 0.00 36.97 2.17
849 850 4.324267 CAACGGGTCAACCTAGAAAATCT 58.676 43.478 0.00 0.00 36.97 2.40
850 851 4.635699 ACGGGTCAACCTAGAAAATCTT 57.364 40.909 0.00 0.00 36.97 2.40
851 852 4.324267 ACGGGTCAACCTAGAAAATCTTG 58.676 43.478 0.00 0.00 36.97 3.02
857 858 0.657840 CCTAGAAAATCTTGCCGGCG 59.342 55.000 23.90 8.74 0.00 6.46
1215 1262 4.521062 CTCCTCGCCGCCTCCAAG 62.521 72.222 0.00 0.00 0.00 3.61
1644 1706 0.531200 GGACGACTACCTTGGTCCTG 59.469 60.000 0.00 0.00 44.35 3.86
1689 1751 0.250513 AGGTTGTGCTCTTCGATCCC 59.749 55.000 0.00 0.00 0.00 3.85
1697 1759 0.818296 CTCTTCGATCCCGGAACTGT 59.182 55.000 0.73 0.00 36.24 3.55
1746 1808 2.450243 GAGGAGGACCCAGACCCA 59.550 66.667 0.00 0.00 37.41 4.51
1802 1864 2.954318 CCTGAGATGGCCAAATTAGTGG 59.046 50.000 10.96 2.60 42.05 4.00
1875 1937 6.373495 TCAGATGTTGTATGTAGTCACGTACT 59.627 38.462 8.23 0.00 44.33 2.73
1897 1959 9.696917 GTACTCTTTTCAATTTTGATCCAATGT 57.303 29.630 0.00 0.00 37.00 2.71
1976 2043 2.862541 TCACCCCTCAATCAACAAGTG 58.137 47.619 0.00 0.00 0.00 3.16
2003 2071 9.974980 AAGTAAATAAAAGTGGTGGTTTATGTG 57.025 29.630 0.00 0.00 31.79 3.21
2016 2084 3.437049 GGTTTATGTGCACTCCTTGTCTC 59.563 47.826 19.41 0.03 0.00 3.36
2017 2085 3.334583 TTATGTGCACTCCTTGTCTCC 57.665 47.619 19.41 0.00 0.00 3.71
2018 2086 1.059098 ATGTGCACTCCTTGTCTCCA 58.941 50.000 19.41 0.00 0.00 3.86
2048 2119 8.919777 ATACCTTTTCAGTTAGCTGTTACTTT 57.080 30.769 6.47 0.00 43.05 2.66
2101 2175 9.625747 TTGGTATTGATGATAGTTTTGCTGATA 57.374 29.630 0.00 0.00 0.00 2.15
2120 2194 9.050154 TGCTGATATAGAGAATTCCAATATGGA 57.950 33.333 0.65 0.00 46.61 3.41
2181 2255 5.702209 GGGTGTTTCCGTTTAACTTGAGATA 59.298 40.000 0.00 0.00 37.00 1.98
2228 2305 4.216472 GGAACTTTTGCTGGAACCTTAGAG 59.784 45.833 0.00 0.00 0.00 2.43
2233 2310 0.746204 GCTGGAACCTTAGAGGCAGC 60.746 60.000 8.60 8.60 40.19 5.25
2299 2376 1.967319 TTCTCTGTCAACCAACTGCC 58.033 50.000 0.00 0.00 0.00 4.85
2339 2416 8.311109 GTGGGTTATTGTTGGATAACTTGAATT 58.689 33.333 7.46 0.00 40.61 2.17
2415 2492 2.427453 ACCTATCACCACACTCTTAGCG 59.573 50.000 0.00 0.00 0.00 4.26
2458 2535 1.755179 ATAGTGCCCATTGCTGTGTC 58.245 50.000 0.00 0.00 42.00 3.67
2471 2548 3.728845 TGCTGTGTCTACTTCACCTTTC 58.271 45.455 0.00 0.00 35.25 2.62
2521 2604 5.679734 ACGGCATGTATCTGAAATGAATC 57.320 39.130 0.00 0.00 0.00 2.52
2741 2827 6.936335 GGATGGGCAATTATTTTTAAGATGGG 59.064 38.462 0.00 0.00 0.00 4.00
2744 2830 6.126911 TGGGCAATTATTTTTAAGATGGGGTC 60.127 38.462 0.00 0.00 0.00 4.46
2771 2857 7.867909 GCTCTCTTTTTGCCACTAACTAAAATT 59.132 33.333 0.00 0.00 0.00 1.82
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.718956 ACATAGGGCAAGCTCCTCTATTT 59.281 43.478 4.44 0.00 35.92 1.40
1 2 3.321950 ACATAGGGCAAGCTCCTCTATT 58.678 45.455 4.44 0.00 35.92 1.73
2 3 2.983296 ACATAGGGCAAGCTCCTCTAT 58.017 47.619 5.53 0.00 35.92 1.98
3 4 2.478872 ACATAGGGCAAGCTCCTCTA 57.521 50.000 5.53 0.00 35.92 2.43
4 5 2.478872 TACATAGGGCAAGCTCCTCT 57.521 50.000 5.53 0.00 35.92 3.69
5 6 2.224402 CCTTACATAGGGCAAGCTCCTC 60.224 54.545 5.53 0.00 40.67 3.71
6 7 1.771255 CCTTACATAGGGCAAGCTCCT 59.229 52.381 7.16 7.16 40.67 3.69
7 8 1.768870 TCCTTACATAGGGCAAGCTCC 59.231 52.381 0.00 0.00 44.86 4.70
8 9 3.560636 TTCCTTACATAGGGCAAGCTC 57.439 47.619 0.00 0.00 44.86 4.09
9 10 4.210331 CATTTCCTTACATAGGGCAAGCT 58.790 43.478 0.00 0.00 44.86 3.74
10 11 3.954258 ACATTTCCTTACATAGGGCAAGC 59.046 43.478 0.00 0.00 44.86 4.01
11 12 7.502226 TGATTACATTTCCTTACATAGGGCAAG 59.498 37.037 0.00 0.00 44.86 4.01
12 13 7.350382 TGATTACATTTCCTTACATAGGGCAA 58.650 34.615 0.00 0.00 44.86 4.52
13 14 6.905736 TGATTACATTTCCTTACATAGGGCA 58.094 36.000 0.00 0.00 44.86 5.36
14 15 7.817418 TTGATTACATTTCCTTACATAGGGC 57.183 36.000 0.00 0.00 44.86 5.19
19 20 9.492730 AAGGGATTTGATTACATTTCCTTACAT 57.507 29.630 0.00 0.00 31.95 2.29
20 21 8.893563 AAGGGATTTGATTACATTTCCTTACA 57.106 30.769 0.00 0.00 31.95 2.41
39 40 9.547279 ACTCATTTGGATAACTTTTTAAGGGAT 57.453 29.630 0.00 0.00 0.00 3.85
40 41 8.802267 CACTCATTTGGATAACTTTTTAAGGGA 58.198 33.333 0.00 0.00 0.00 4.20
41 42 8.034804 CCACTCATTTGGATAACTTTTTAAGGG 58.965 37.037 0.00 0.00 39.24 3.95
42 43 8.585018 ACCACTCATTTGGATAACTTTTTAAGG 58.415 33.333 0.00 0.00 39.24 2.69
43 44 9.410556 CACCACTCATTTGGATAACTTTTTAAG 57.589 33.333 0.00 0.00 39.24 1.85
44 45 7.870445 GCACCACTCATTTGGATAACTTTTTAA 59.130 33.333 0.00 0.00 39.24 1.52
45 46 7.014711 TGCACCACTCATTTGGATAACTTTTTA 59.985 33.333 0.00 0.00 39.24 1.52
46 47 6.183360 TGCACCACTCATTTGGATAACTTTTT 60.183 34.615 0.00 0.00 39.24 1.94
47 48 5.304101 TGCACCACTCATTTGGATAACTTTT 59.696 36.000 0.00 0.00 39.24 2.27
48 49 4.832266 TGCACCACTCATTTGGATAACTTT 59.168 37.500 0.00 0.00 39.24 2.66
49 50 4.406456 TGCACCACTCATTTGGATAACTT 58.594 39.130 0.00 0.00 39.24 2.66
50 51 4.032960 TGCACCACTCATTTGGATAACT 57.967 40.909 0.00 0.00 39.24 2.24
51 52 4.380867 CCTTGCACCACTCATTTGGATAAC 60.381 45.833 0.00 0.00 39.24 1.89
52 53 3.763360 CCTTGCACCACTCATTTGGATAA 59.237 43.478 0.00 0.00 39.24 1.75
53 54 3.355378 CCTTGCACCACTCATTTGGATA 58.645 45.455 0.00 0.00 39.24 2.59
54 55 2.173519 CCTTGCACCACTCATTTGGAT 58.826 47.619 0.00 0.00 39.24 3.41
55 56 1.619654 CCTTGCACCACTCATTTGGA 58.380 50.000 0.00 0.00 39.24 3.53
56 57 0.037975 GCCTTGCACCACTCATTTGG 60.038 55.000 0.00 0.00 43.04 3.28
57 58 0.675083 TGCCTTGCACCACTCATTTG 59.325 50.000 0.00 0.00 31.71 2.32
58 59 1.412079 TTGCCTTGCACCACTCATTT 58.588 45.000 0.00 0.00 38.71 2.32
59 60 1.636148 ATTGCCTTGCACCACTCATT 58.364 45.000 0.00 0.00 38.71 2.57
60 61 2.094675 GTATTGCCTTGCACCACTCAT 58.905 47.619 0.00 0.00 38.71 2.90
61 62 1.202867 TGTATTGCCTTGCACCACTCA 60.203 47.619 0.00 0.00 38.71 3.41
62 63 1.200020 GTGTATTGCCTTGCACCACTC 59.800 52.381 0.00 0.00 38.71 3.51
63 64 1.247567 GTGTATTGCCTTGCACCACT 58.752 50.000 0.00 0.00 38.71 4.00
64 65 3.792716 GTGTATTGCCTTGCACCAC 57.207 52.632 0.00 0.00 38.71 4.16
67 68 6.391227 AATATAAGGTGTATTGCCTTGCAC 57.609 37.500 6.83 0.00 45.14 4.57
68 69 7.123397 TCAAAATATAAGGTGTATTGCCTTGCA 59.877 33.333 6.83 0.00 45.14 4.08
69 70 7.488322 TCAAAATATAAGGTGTATTGCCTTGC 58.512 34.615 6.83 0.00 45.14 4.01
70 71 9.301153 GTTCAAAATATAAGGTGTATTGCCTTG 57.699 33.333 6.83 0.00 45.14 3.61
71 72 9.255029 AGTTCAAAATATAAGGTGTATTGCCTT 57.745 29.630 2.07 2.07 46.90 4.35
72 73 8.823220 AGTTCAAAATATAAGGTGTATTGCCT 57.177 30.769 0.00 0.00 38.11 4.75
73 74 9.869757 AAAGTTCAAAATATAAGGTGTATTGCC 57.130 29.630 0.00 0.00 0.00 4.52
108 109 9.622004 CGTTCCTTGATATAACGTGTATAGATT 57.378 33.333 0.00 0.00 40.69 2.40
109 110 8.242053 CCGTTCCTTGATATAACGTGTATAGAT 58.758 37.037 6.88 0.00 43.27 1.98
110 111 7.445096 TCCGTTCCTTGATATAACGTGTATAGA 59.555 37.037 6.88 0.00 43.27 1.98
111 112 7.587629 TCCGTTCCTTGATATAACGTGTATAG 58.412 38.462 6.88 0.00 43.27 1.31
112 113 7.308770 CCTCCGTTCCTTGATATAACGTGTATA 60.309 40.741 6.88 0.00 43.27 1.47
113 114 6.395426 TCCGTTCCTTGATATAACGTGTAT 57.605 37.500 6.88 0.00 43.27 2.29
114 115 5.221106 CCTCCGTTCCTTGATATAACGTGTA 60.221 44.000 6.88 0.00 43.27 2.90
115 116 4.441079 CCTCCGTTCCTTGATATAACGTGT 60.441 45.833 6.88 0.00 43.27 4.49
116 117 4.049186 CCTCCGTTCCTTGATATAACGTG 58.951 47.826 6.88 0.53 43.27 4.49
117 118 3.069158 CCCTCCGTTCCTTGATATAACGT 59.931 47.826 6.88 0.00 43.27 3.99
118 119 3.319972 TCCCTCCGTTCCTTGATATAACG 59.680 47.826 0.00 0.00 44.13 3.18
119 120 4.587684 TCTCCCTCCGTTCCTTGATATAAC 59.412 45.833 0.00 0.00 0.00 1.89
120 121 4.811498 TCTCCCTCCGTTCCTTGATATAA 58.189 43.478 0.00 0.00 0.00 0.98
121 122 4.464652 TCTCCCTCCGTTCCTTGATATA 57.535 45.455 0.00 0.00 0.00 0.86
122 123 3.330126 TCTCCCTCCGTTCCTTGATAT 57.670 47.619 0.00 0.00 0.00 1.63
123 124 2.840640 TCTCCCTCCGTTCCTTGATA 57.159 50.000 0.00 0.00 0.00 2.15
124 125 1.952621 TTCTCCCTCCGTTCCTTGAT 58.047 50.000 0.00 0.00 0.00 2.57
125 126 1.952621 ATTCTCCCTCCGTTCCTTGA 58.047 50.000 0.00 0.00 0.00 3.02
126 127 4.423625 AATATTCTCCCTCCGTTCCTTG 57.576 45.455 0.00 0.00 0.00 3.61
127 128 6.570654 TTAAATATTCTCCCTCCGTTCCTT 57.429 37.500 0.00 0.00 0.00 3.36
128 129 6.069847 TGTTTAAATATTCTCCCTCCGTTCCT 60.070 38.462 0.00 0.00 0.00 3.36
129 130 6.117488 TGTTTAAATATTCTCCCTCCGTTCC 58.883 40.000 0.00 0.00 0.00 3.62
130 131 7.619964 TTGTTTAAATATTCTCCCTCCGTTC 57.380 36.000 0.00 0.00 0.00 3.95
131 132 8.411991 TTTTGTTTAAATATTCTCCCTCCGTT 57.588 30.769 0.00 0.00 0.00 4.44
132 133 8.411991 TTTTTGTTTAAATATTCTCCCTCCGT 57.588 30.769 0.00 0.00 0.00 4.69
133 134 7.973944 CCTTTTTGTTTAAATATTCTCCCTCCG 59.026 37.037 0.00 0.00 0.00 4.63
134 135 8.258007 CCCTTTTTGTTTAAATATTCTCCCTCC 58.742 37.037 0.00 0.00 0.00 4.30
135 136 9.031537 TCCCTTTTTGTTTAAATATTCTCCCTC 57.968 33.333 0.00 0.00 0.00 4.30
136 137 8.966155 TCCCTTTTTGTTTAAATATTCTCCCT 57.034 30.769 0.00 0.00 0.00 4.20
180 181 4.638865 GGCCCTATCGACACTTATGTTTTT 59.361 41.667 0.00 0.00 39.95 1.94
181 182 4.196971 GGCCCTATCGACACTTATGTTTT 58.803 43.478 0.00 0.00 39.95 2.43
182 183 3.433173 GGGCCCTATCGACACTTATGTTT 60.433 47.826 17.04 0.00 39.95 2.83
183 184 2.104281 GGGCCCTATCGACACTTATGTT 59.896 50.000 17.04 0.00 39.95 2.71
184 185 1.692519 GGGCCCTATCGACACTTATGT 59.307 52.381 17.04 0.00 43.71 2.29
185 186 1.691976 TGGGCCCTATCGACACTTATG 59.308 52.381 25.70 0.00 0.00 1.90
186 187 2.097110 TGGGCCCTATCGACACTTAT 57.903 50.000 25.70 0.00 0.00 1.73
187 188 2.097110 ATGGGCCCTATCGACACTTA 57.903 50.000 25.70 0.00 0.00 2.24
188 189 1.213296 AATGGGCCCTATCGACACTT 58.787 50.000 25.70 0.00 0.00 3.16
189 190 1.213296 AAATGGGCCCTATCGACACT 58.787 50.000 25.70 0.00 0.00 3.55
190 191 2.922740 TAAATGGGCCCTATCGACAC 57.077 50.000 25.70 0.00 0.00 3.67
191 192 3.137544 ACATTAAATGGGCCCTATCGACA 59.862 43.478 25.70 0.00 33.60 4.35
192 193 3.502211 CACATTAAATGGGCCCTATCGAC 59.498 47.826 25.70 0.00 33.60 4.20
193 194 3.497763 CCACATTAAATGGGCCCTATCGA 60.498 47.826 25.70 1.02 33.18 3.59
194 195 2.819608 CCACATTAAATGGGCCCTATCG 59.180 50.000 25.70 7.43 33.18 2.92
203 204 2.137810 ACCGACCCCACATTAAATGG 57.862 50.000 2.70 2.70 36.94 3.16
204 205 2.165437 CCAACCGACCCCACATTAAATG 59.835 50.000 0.00 0.00 0.00 2.32
205 206 2.452505 CCAACCGACCCCACATTAAAT 58.547 47.619 0.00 0.00 0.00 1.40
206 207 1.548128 CCCAACCGACCCCACATTAAA 60.548 52.381 0.00 0.00 0.00 1.52
207 208 0.038455 CCCAACCGACCCCACATTAA 59.962 55.000 0.00 0.00 0.00 1.40
208 209 1.686416 CCCAACCGACCCCACATTA 59.314 57.895 0.00 0.00 0.00 1.90
209 210 2.438795 CCCAACCGACCCCACATT 59.561 61.111 0.00 0.00 0.00 2.71
210 211 4.360405 GCCCAACCGACCCCACAT 62.360 66.667 0.00 0.00 0.00 3.21
212 213 3.324108 TAGCCCAACCGACCCCAC 61.324 66.667 0.00 0.00 0.00 4.61
213 214 3.006728 CTAGCCCAACCGACCCCA 61.007 66.667 0.00 0.00 0.00 4.96
214 215 4.484872 GCTAGCCCAACCGACCCC 62.485 72.222 2.29 0.00 0.00 4.95
215 216 3.043999 ATGCTAGCCCAACCGACCC 62.044 63.158 13.29 0.00 0.00 4.46
216 217 1.819632 CATGCTAGCCCAACCGACC 60.820 63.158 13.29 0.00 0.00 4.79
217 218 1.819632 CCATGCTAGCCCAACCGAC 60.820 63.158 13.29 0.00 0.00 4.79
218 219 2.589540 CCATGCTAGCCCAACCGA 59.410 61.111 13.29 0.00 0.00 4.69
219 220 2.516930 CCCATGCTAGCCCAACCG 60.517 66.667 13.29 0.00 0.00 4.44
220 221 2.834968 GCCCATGCTAGCCCAACC 60.835 66.667 13.29 0.00 33.53 3.77
221 222 2.834968 GGCCCATGCTAGCCCAAC 60.835 66.667 13.29 0.00 43.76 3.77
226 227 1.227793 GTCTCTGGCCCATGCTAGC 60.228 63.158 8.10 8.10 45.06 3.42
227 228 1.068753 CGTCTCTGGCCCATGCTAG 59.931 63.158 0.00 0.00 46.67 3.42
228 229 3.094062 GCGTCTCTGGCCCATGCTA 62.094 63.158 0.00 0.00 37.74 3.49
229 230 4.479993 GCGTCTCTGGCCCATGCT 62.480 66.667 0.00 0.00 37.74 3.79
253 254 1.727511 TATAAGGACGCCCGGACACG 61.728 60.000 0.73 6.47 37.58 4.49
254 255 0.677842 ATATAAGGACGCCCGGACAC 59.322 55.000 0.73 0.00 37.58 3.67
255 256 0.963962 GATATAAGGACGCCCGGACA 59.036 55.000 0.73 0.00 37.58 4.02
256 257 1.067776 CAGATATAAGGACGCCCGGAC 60.068 57.143 0.73 0.00 37.58 4.79
257 258 1.254026 CAGATATAAGGACGCCCGGA 58.746 55.000 0.73 0.00 37.58 5.14
258 259 0.389948 GCAGATATAAGGACGCCCGG 60.390 60.000 0.00 0.00 37.58 5.73
259 260 0.389948 GGCAGATATAAGGACGCCCG 60.390 60.000 0.00 0.00 37.58 6.13
260 261 3.534721 GGCAGATATAAGGACGCCC 57.465 57.895 0.00 0.00 33.31 6.13
261 262 0.977395 AGGGCAGATATAAGGACGCC 59.023 55.000 0.00 0.00 38.85 5.68
262 263 3.090037 TCTAGGGCAGATATAAGGACGC 58.910 50.000 0.00 0.00 0.00 5.19
272 273 1.912043 GCCACCATATCTAGGGCAGAT 59.088 52.381 0.00 0.00 46.19 2.90
273 274 1.132721 AGCCACCATATCTAGGGCAGA 60.133 52.381 0.00 0.00 46.96 4.26
274 275 1.356124 AGCCACCATATCTAGGGCAG 58.644 55.000 0.00 0.00 46.96 4.85
275 276 1.421268 CAAGCCACCATATCTAGGGCA 59.579 52.381 0.00 0.00 46.96 5.36
276 277 1.699634 TCAAGCCACCATATCTAGGGC 59.300 52.381 0.00 0.00 44.92 5.19
277 278 5.426509 TCATATCAAGCCACCATATCTAGGG 59.573 44.000 0.00 0.00 0.00 3.53
278 279 6.407865 CCTCATATCAAGCCACCATATCTAGG 60.408 46.154 0.00 0.00 0.00 3.02
279 280 6.382282 TCCTCATATCAAGCCACCATATCTAG 59.618 42.308 0.00 0.00 0.00 2.43
280 281 6.263754 TCCTCATATCAAGCCACCATATCTA 58.736 40.000 0.00 0.00 0.00 1.98
281 282 5.096521 TCCTCATATCAAGCCACCATATCT 58.903 41.667 0.00 0.00 0.00 1.98
282 283 5.426689 TCCTCATATCAAGCCACCATATC 57.573 43.478 0.00 0.00 0.00 1.63
283 284 5.848286 TTCCTCATATCAAGCCACCATAT 57.152 39.130 0.00 0.00 0.00 1.78
284 285 5.563592 CATTCCTCATATCAAGCCACCATA 58.436 41.667 0.00 0.00 0.00 2.74
285 286 4.404640 CATTCCTCATATCAAGCCACCAT 58.595 43.478 0.00 0.00 0.00 3.55
286 287 3.824133 CATTCCTCATATCAAGCCACCA 58.176 45.455 0.00 0.00 0.00 4.17
287 288 2.555757 GCATTCCTCATATCAAGCCACC 59.444 50.000 0.00 0.00 0.00 4.61
288 289 2.555757 GGCATTCCTCATATCAAGCCAC 59.444 50.000 0.00 0.00 40.50 5.01
289 290 2.867624 GGCATTCCTCATATCAAGCCA 58.132 47.619 0.00 0.00 40.50 4.75
290 291 2.818432 CTGGCATTCCTCATATCAAGCC 59.182 50.000 0.00 0.00 41.15 4.35
291 292 3.484407 ACTGGCATTCCTCATATCAAGC 58.516 45.455 0.00 0.00 0.00 4.01
292 293 4.711399 TGACTGGCATTCCTCATATCAAG 58.289 43.478 2.13 0.00 0.00 3.02
293 294 4.409901 TCTGACTGGCATTCCTCATATCAA 59.590 41.667 2.13 0.00 0.00 2.57
294 295 3.969312 TCTGACTGGCATTCCTCATATCA 59.031 43.478 2.13 0.00 0.00 2.15
295 296 4.314121 GTCTGACTGGCATTCCTCATATC 58.686 47.826 2.13 0.00 0.00 1.63
296 297 3.072184 GGTCTGACTGGCATTCCTCATAT 59.928 47.826 7.85 0.00 0.00 1.78
297 298 2.435805 GGTCTGACTGGCATTCCTCATA 59.564 50.000 7.85 0.00 0.00 2.15
298 299 1.211457 GGTCTGACTGGCATTCCTCAT 59.789 52.381 7.85 0.00 0.00 2.90
299 300 0.615331 GGTCTGACTGGCATTCCTCA 59.385 55.000 7.85 0.00 0.00 3.86
300 301 0.460987 CGGTCTGACTGGCATTCCTC 60.461 60.000 8.80 0.00 0.00 3.71
301 302 0.904865 TCGGTCTGACTGGCATTCCT 60.905 55.000 16.18 0.00 0.00 3.36
302 303 0.460987 CTCGGTCTGACTGGCATTCC 60.461 60.000 16.18 0.00 0.00 3.01
303 304 1.086634 GCTCGGTCTGACTGGCATTC 61.087 60.000 16.18 0.00 0.00 2.67
304 305 1.078848 GCTCGGTCTGACTGGCATT 60.079 57.895 16.18 0.00 0.00 3.56
305 306 1.620739 ATGCTCGGTCTGACTGGCAT 61.621 55.000 26.23 26.23 36.91 4.40
306 307 1.830587 AATGCTCGGTCTGACTGGCA 61.831 55.000 24.78 24.78 35.95 4.92
307 308 0.674895 AAATGCTCGGTCTGACTGGC 60.675 55.000 16.18 17.08 0.00 4.85
308 309 1.081892 CAAATGCTCGGTCTGACTGG 58.918 55.000 16.18 8.45 0.00 4.00
309 310 1.998315 CTCAAATGCTCGGTCTGACTG 59.002 52.381 10.41 10.41 0.00 3.51
310 311 1.674221 GCTCAAATGCTCGGTCTGACT 60.674 52.381 7.85 0.00 0.00 3.41
311 312 0.723981 GCTCAAATGCTCGGTCTGAC 59.276 55.000 0.00 0.00 0.00 3.51
312 313 0.391661 GGCTCAAATGCTCGGTCTGA 60.392 55.000 0.00 0.00 0.00 3.27
313 314 0.392193 AGGCTCAAATGCTCGGTCTG 60.392 55.000 0.00 0.00 0.00 3.51
314 315 0.392193 CAGGCTCAAATGCTCGGTCT 60.392 55.000 0.00 0.00 0.00 3.85
315 316 0.391661 TCAGGCTCAAATGCTCGGTC 60.392 55.000 0.00 0.00 0.00 4.79
316 317 0.036732 TTCAGGCTCAAATGCTCGGT 59.963 50.000 0.00 0.00 0.00 4.69
317 318 1.167851 TTTCAGGCTCAAATGCTCGG 58.832 50.000 0.00 0.00 0.00 4.63
318 319 2.415090 CCTTTTCAGGCTCAAATGCTCG 60.415 50.000 0.00 0.00 31.53 5.03
319 320 2.094338 CCCTTTTCAGGCTCAAATGCTC 60.094 50.000 0.00 0.00 39.20 4.26
320 321 1.897802 CCCTTTTCAGGCTCAAATGCT 59.102 47.619 0.00 0.00 39.20 3.79
321 322 1.066645 CCCCTTTTCAGGCTCAAATGC 60.067 52.381 0.00 0.00 39.20 3.56
322 323 1.066645 GCCCCTTTTCAGGCTCAAATG 60.067 52.381 0.00 0.00 46.14 2.32
323 324 1.269958 GCCCCTTTTCAGGCTCAAAT 58.730 50.000 0.00 0.00 46.14 2.32
324 325 2.745379 GCCCCTTTTCAGGCTCAAA 58.255 52.632 0.00 0.00 46.14 2.69
325 326 4.519610 GCCCCTTTTCAGGCTCAA 57.480 55.556 0.00 0.00 46.14 3.02
330 331 2.499303 ATCGGGTGCCCCTTTTCAGG 62.499 60.000 8.43 0.00 42.67 3.86
331 332 0.611896 AATCGGGTGCCCCTTTTCAG 60.612 55.000 8.43 0.00 42.67 3.02
332 333 0.897863 CAATCGGGTGCCCCTTTTCA 60.898 55.000 8.43 0.00 42.67 2.69
333 334 1.604147 CCAATCGGGTGCCCCTTTTC 61.604 60.000 8.43 0.00 42.67 2.29
334 335 1.609210 CCAATCGGGTGCCCCTTTT 60.609 57.895 8.43 0.15 42.67 2.27
335 336 1.874299 ATCCAATCGGGTGCCCCTTT 61.874 55.000 8.43 0.45 42.67 3.11
336 337 2.316586 ATCCAATCGGGTGCCCCTT 61.317 57.895 8.43 0.00 42.67 3.95
337 338 2.696125 ATCCAATCGGGTGCCCCT 60.696 61.111 8.43 0.00 42.67 4.79
338 339 2.519302 CATCCAATCGGGTGCCCC 60.519 66.667 0.99 0.30 36.33 5.80
339 340 1.823899 GTCATCCAATCGGGTGCCC 60.824 63.158 0.00 0.00 43.89 5.36
340 341 2.180204 CGTCATCCAATCGGGTGCC 61.180 63.158 0.00 0.00 43.89 5.01
341 342 1.024579 AACGTCATCCAATCGGGTGC 61.025 55.000 0.00 0.00 43.89 5.01
342 343 1.448985 AAACGTCATCCAATCGGGTG 58.551 50.000 0.00 0.00 45.83 4.61
343 344 2.194201 AAAACGTCATCCAATCGGGT 57.806 45.000 0.00 0.00 38.11 5.28
360 361 2.151202 GGTCAGCATCTGGACGAAAAA 58.849 47.619 0.00 0.00 31.51 1.94
361 362 1.808411 GGTCAGCATCTGGACGAAAA 58.192 50.000 0.00 0.00 31.51 2.29
362 363 0.389817 CGGTCAGCATCTGGACGAAA 60.390 55.000 0.00 0.00 34.74 3.46
363 364 1.215382 CGGTCAGCATCTGGACGAA 59.785 57.895 0.00 0.00 34.74 3.85
364 365 2.710902 CCGGTCAGCATCTGGACGA 61.711 63.158 0.00 0.00 34.74 4.20
365 366 2.202797 CCGGTCAGCATCTGGACG 60.203 66.667 0.00 0.14 33.49 4.79
366 367 2.187946 CCCGGTCAGCATCTGGAC 59.812 66.667 0.00 0.00 33.49 4.02
367 368 3.785859 GCCCGGTCAGCATCTGGA 61.786 66.667 0.00 0.00 33.49 3.86
368 369 4.100084 TGCCCGGTCAGCATCTGG 62.100 66.667 0.00 0.00 34.69 3.86
369 370 2.513204 CTGCCCGGTCAGCATCTG 60.513 66.667 0.00 0.00 40.04 2.90
388 389 2.824041 CCTCAAACGCCCGGATGG 60.824 66.667 0.73 0.00 37.09 3.51
389 390 3.508840 GCCTCAAACGCCCGGATG 61.509 66.667 0.73 0.00 0.00 3.51
393 394 2.901051 ATACTCGCCTCAAACGCCCG 62.901 60.000 0.00 0.00 0.00 6.13
394 395 1.153429 ATACTCGCCTCAAACGCCC 60.153 57.895 0.00 0.00 0.00 6.13
395 396 1.429148 CCATACTCGCCTCAAACGCC 61.429 60.000 0.00 0.00 0.00 5.68
396 397 0.459585 TCCATACTCGCCTCAAACGC 60.460 55.000 0.00 0.00 0.00 4.84
397 398 1.560923 CTCCATACTCGCCTCAAACG 58.439 55.000 0.00 0.00 0.00 3.60
398 399 1.473434 CCCTCCATACTCGCCTCAAAC 60.473 57.143 0.00 0.00 0.00 2.93
399 400 0.830648 CCCTCCATACTCGCCTCAAA 59.169 55.000 0.00 0.00 0.00 2.69
400 401 0.325296 ACCCTCCATACTCGCCTCAA 60.325 55.000 0.00 0.00 0.00 3.02
401 402 0.755698 GACCCTCCATACTCGCCTCA 60.756 60.000 0.00 0.00 0.00 3.86
402 403 0.468400 AGACCCTCCATACTCGCCTC 60.468 60.000 0.00 0.00 0.00 4.70
403 404 0.757188 CAGACCCTCCATACTCGCCT 60.757 60.000 0.00 0.00 0.00 5.52
404 405 1.742768 CAGACCCTCCATACTCGCC 59.257 63.158 0.00 0.00 0.00 5.54
405 406 1.043673 ACCAGACCCTCCATACTCGC 61.044 60.000 0.00 0.00 0.00 5.03
406 407 1.486211 AACCAGACCCTCCATACTCG 58.514 55.000 0.00 0.00 0.00 4.18
407 408 4.221041 GCTATAACCAGACCCTCCATACTC 59.779 50.000 0.00 0.00 0.00 2.59
408 409 4.161102 GCTATAACCAGACCCTCCATACT 58.839 47.826 0.00 0.00 0.00 2.12
409 410 3.261137 GGCTATAACCAGACCCTCCATAC 59.739 52.174 0.00 0.00 0.00 2.39
410 411 3.517612 GGCTATAACCAGACCCTCCATA 58.482 50.000 0.00 0.00 0.00 2.74
411 412 2.339769 GGCTATAACCAGACCCTCCAT 58.660 52.381 0.00 0.00 0.00 3.41
412 413 1.802553 GGCTATAACCAGACCCTCCA 58.197 55.000 0.00 0.00 0.00 3.86
413 414 0.680061 CGGCTATAACCAGACCCTCC 59.320 60.000 0.00 0.00 0.00 4.30
414 415 0.033642 GCGGCTATAACCAGACCCTC 59.966 60.000 0.00 0.00 0.00 4.30
415 416 0.398664 AGCGGCTATAACCAGACCCT 60.399 55.000 0.00 0.00 0.00 4.34
416 417 0.033642 GAGCGGCTATAACCAGACCC 59.966 60.000 0.60 0.00 0.00 4.46
417 418 1.041437 AGAGCGGCTATAACCAGACC 58.959 55.000 0.60 0.00 0.00 3.85
418 419 2.892784 AAGAGCGGCTATAACCAGAC 57.107 50.000 0.60 0.00 0.00 3.51
419 420 6.631016 CATTATAAGAGCGGCTATAACCAGA 58.369 40.000 0.60 0.00 0.00 3.86
420 421 5.292101 GCATTATAAGAGCGGCTATAACCAG 59.708 44.000 0.60 0.00 0.00 4.00
421 422 5.175859 GCATTATAAGAGCGGCTATAACCA 58.824 41.667 0.60 0.00 0.00 3.67
422 423 4.571176 GGCATTATAAGAGCGGCTATAACC 59.429 45.833 0.60 0.00 0.00 2.85
423 424 5.175859 TGGCATTATAAGAGCGGCTATAAC 58.824 41.667 0.60 0.00 0.00 1.89
424 425 5.414789 TGGCATTATAAGAGCGGCTATAA 57.585 39.130 0.60 4.23 0.00 0.98
425 426 5.175859 GTTGGCATTATAAGAGCGGCTATA 58.824 41.667 0.60 0.00 0.00 1.31
426 427 3.981071 TGGCATTATAAGAGCGGCTAT 57.019 42.857 0.60 0.00 0.00 2.97
427 428 3.399330 GTTGGCATTATAAGAGCGGCTA 58.601 45.455 0.60 0.00 0.00 3.93
428 429 2.222027 GTTGGCATTATAAGAGCGGCT 58.778 47.619 0.00 0.00 0.00 5.52
429 430 1.266989 GGTTGGCATTATAAGAGCGGC 59.733 52.381 0.00 0.00 0.00 6.53
430 431 1.880027 GGGTTGGCATTATAAGAGCGG 59.120 52.381 6.60 0.00 0.00 5.52
431 432 2.549754 CTGGGTTGGCATTATAAGAGCG 59.450 50.000 6.60 0.00 0.00 5.03
432 433 3.817647 CTCTGGGTTGGCATTATAAGAGC 59.182 47.826 4.54 4.54 0.00 4.09
433 434 4.392940 CCTCTGGGTTGGCATTATAAGAG 58.607 47.826 0.00 0.00 0.00 2.85
434 435 3.138283 CCCTCTGGGTTGGCATTATAAGA 59.862 47.826 0.00 0.00 38.25 2.10
435 436 3.490348 CCCTCTGGGTTGGCATTATAAG 58.510 50.000 0.00 0.00 38.25 1.73
436 437 3.593442 CCCTCTGGGTTGGCATTATAA 57.407 47.619 0.00 0.00 38.25 0.98
449 450 3.053693 TCATGTAATGTTTCCCCCTCTGG 60.054 47.826 0.00 0.00 46.80 3.86
450 451 4.235079 TCATGTAATGTTTCCCCCTCTG 57.765 45.455 0.00 0.00 46.80 3.35
451 452 4.946160 TTCATGTAATGTTTCCCCCTCT 57.054 40.909 0.00 0.00 46.80 3.69
452 453 5.993748 TTTTCATGTAATGTTTCCCCCTC 57.006 39.130 0.00 0.00 46.80 4.30
453 454 6.022315 TCATTTTCATGTAATGTTTCCCCCT 58.978 36.000 17.01 0.00 46.80 4.79
454 455 6.293004 TCATTTTCATGTAATGTTTCCCCC 57.707 37.500 17.01 0.00 46.80 5.40
455 456 7.158021 TGTTCATTTTCATGTAATGTTTCCCC 58.842 34.615 17.01 6.51 46.80 4.81
456 457 8.776376 ATGTTCATTTTCATGTAATGTTTCCC 57.224 30.769 17.01 7.60 46.80 3.97
495 496 6.590068 TGAAACATTCAAACATGGTTTCCAT 58.410 32.000 14.74 0.00 39.90 3.41
496 497 5.982356 TGAAACATTCAAACATGGTTTCCA 58.018 33.333 14.74 0.00 34.02 3.53
497 498 6.917217 TTGAAACATTCAAACATGGTTTCC 57.083 33.333 14.74 3.32 45.94 3.13
533 534 8.617290 ACACCTTCTTAACATCTCGTATTTTT 57.383 30.769 0.00 0.00 0.00 1.94
534 535 8.617290 AACACCTTCTTAACATCTCGTATTTT 57.383 30.769 0.00 0.00 0.00 1.82
535 536 8.617290 AAACACCTTCTTAACATCTCGTATTT 57.383 30.769 0.00 0.00 0.00 1.40
536 537 8.617290 AAAACACCTTCTTAACATCTCGTATT 57.383 30.769 0.00 0.00 0.00 1.89
537 538 9.886132 ATAAAACACCTTCTTAACATCTCGTAT 57.114 29.630 0.00 0.00 0.00 3.06
538 539 9.715121 AATAAAACACCTTCTTAACATCTCGTA 57.285 29.630 0.00 0.00 0.00 3.43
539 540 8.504005 CAATAAAACACCTTCTTAACATCTCGT 58.496 33.333 0.00 0.00 0.00 4.18
540 541 7.481798 GCAATAAAACACCTTCTTAACATCTCG 59.518 37.037 0.00 0.00 0.00 4.04
541 542 7.755373 GGCAATAAAACACCTTCTTAACATCTC 59.245 37.037 0.00 0.00 0.00 2.75
542 543 7.232534 TGGCAATAAAACACCTTCTTAACATCT 59.767 33.333 0.00 0.00 0.00 2.90
543 544 7.375053 TGGCAATAAAACACCTTCTTAACATC 58.625 34.615 0.00 0.00 0.00 3.06
544 545 7.296628 TGGCAATAAAACACCTTCTTAACAT 57.703 32.000 0.00 0.00 0.00 2.71
545 546 6.716934 TGGCAATAAAACACCTTCTTAACA 57.283 33.333 0.00 0.00 0.00 2.41
551 552 9.869757 ACTTTTATATGGCAATAAAACACCTTC 57.130 29.630 16.53 0.00 36.73 3.46
552 553 9.869757 GACTTTTATATGGCAATAAAACACCTT 57.130 29.630 16.53 6.11 36.73 3.50
553 554 8.474831 GGACTTTTATATGGCAATAAAACACCT 58.525 33.333 16.53 6.50 36.73 4.00
554 555 8.254508 TGGACTTTTATATGGCAATAAAACACC 58.745 33.333 16.53 18.68 36.73 4.16
555 556 9.646427 TTGGACTTTTATATGGCAATAAAACAC 57.354 29.630 16.53 13.95 36.73 3.32
556 557 9.868277 CTTGGACTTTTATATGGCAATAAAACA 57.132 29.630 16.53 12.90 36.73 2.83
557 558 9.869757 ACTTGGACTTTTATATGGCAATAAAAC 57.130 29.630 16.53 11.42 36.73 2.43
563 564 9.699703 GTTTTAACTTGGACTTTTATATGGCAA 57.300 29.630 0.00 0.00 0.00 4.52
564 565 8.861086 TGTTTTAACTTGGACTTTTATATGGCA 58.139 29.630 0.00 0.00 0.00 4.92
565 566 9.869757 ATGTTTTAACTTGGACTTTTATATGGC 57.130 29.630 0.00 0.00 0.00 4.40
572 573 9.902196 CCGTAATATGTTTTAACTTGGACTTTT 57.098 29.630 0.00 0.00 0.00 2.27
573 574 9.287373 TCCGTAATATGTTTTAACTTGGACTTT 57.713 29.630 0.00 0.00 0.00 2.66
574 575 8.851541 TCCGTAATATGTTTTAACTTGGACTT 57.148 30.769 0.00 0.00 0.00 3.01
575 576 8.889717 CATCCGTAATATGTTTTAACTTGGACT 58.110 33.333 0.00 0.00 0.00 3.85
576 577 7.642586 GCATCCGTAATATGTTTTAACTTGGAC 59.357 37.037 0.00 0.00 0.00 4.02
577 578 7.466185 CGCATCCGTAATATGTTTTAACTTGGA 60.466 37.037 0.00 0.00 0.00 3.53
578 579 6.631238 CGCATCCGTAATATGTTTTAACTTGG 59.369 38.462 0.00 0.00 0.00 3.61
579 580 7.403421 TCGCATCCGTAATATGTTTTAACTTG 58.597 34.615 0.00 0.00 35.54 3.16
580 581 7.542534 TCGCATCCGTAATATGTTTTAACTT 57.457 32.000 0.00 0.00 35.54 2.66
581 582 6.292703 GCTCGCATCCGTAATATGTTTTAACT 60.293 38.462 0.00 0.00 35.54 2.24
582 583 5.844396 GCTCGCATCCGTAATATGTTTTAAC 59.156 40.000 0.00 0.00 35.54 2.01
583 584 5.756347 AGCTCGCATCCGTAATATGTTTTAA 59.244 36.000 0.00 0.00 35.54 1.52
584 585 5.294356 AGCTCGCATCCGTAATATGTTTTA 58.706 37.500 0.00 0.00 35.54 1.52
585 586 4.127171 AGCTCGCATCCGTAATATGTTTT 58.873 39.130 0.00 0.00 35.54 2.43
586 587 3.728845 AGCTCGCATCCGTAATATGTTT 58.271 40.909 0.00 0.00 35.54 2.83
587 588 3.386768 AGCTCGCATCCGTAATATGTT 57.613 42.857 0.00 0.00 35.54 2.71
588 589 3.756963 TCTAGCTCGCATCCGTAATATGT 59.243 43.478 0.00 0.00 35.54 2.29
589 590 4.357018 TCTAGCTCGCATCCGTAATATG 57.643 45.455 0.00 0.00 35.54 1.78
590 591 5.386958 TTTCTAGCTCGCATCCGTAATAT 57.613 39.130 0.00 0.00 35.54 1.28
591 592 4.841443 TTTCTAGCTCGCATCCGTAATA 57.159 40.909 0.00 0.00 35.54 0.98
592 593 3.728076 TTTCTAGCTCGCATCCGTAAT 57.272 42.857 0.00 0.00 35.54 1.89
593 594 3.513680 TTTTCTAGCTCGCATCCGTAA 57.486 42.857 0.00 0.00 35.54 3.18
594 595 3.513680 TTTTTCTAGCTCGCATCCGTA 57.486 42.857 0.00 0.00 35.54 4.02
595 596 2.380084 TTTTTCTAGCTCGCATCCGT 57.620 45.000 0.00 0.00 35.54 4.69
620 621 2.503331 ACGTCACCATTCATTGCTGAA 58.497 42.857 0.00 0.00 45.15 3.02
621 622 2.183478 ACGTCACCATTCATTGCTGA 57.817 45.000 0.00 0.00 0.00 4.26
622 623 2.995466 AACGTCACCATTCATTGCTG 57.005 45.000 0.00 0.00 0.00 4.41
623 624 3.674997 AGTAACGTCACCATTCATTGCT 58.325 40.909 0.00 0.00 0.00 3.91
624 625 5.734855 ATAGTAACGTCACCATTCATTGC 57.265 39.130 0.00 0.00 0.00 3.56
625 626 6.966632 CCAAATAGTAACGTCACCATTCATTG 59.033 38.462 0.00 0.00 0.00 2.82
626 627 6.404293 GCCAAATAGTAACGTCACCATTCATT 60.404 38.462 0.00 0.00 0.00 2.57
627 628 5.065988 GCCAAATAGTAACGTCACCATTCAT 59.934 40.000 0.00 0.00 0.00 2.57
628 629 4.393680 GCCAAATAGTAACGTCACCATTCA 59.606 41.667 0.00 0.00 0.00 2.57
629 630 4.393680 TGCCAAATAGTAACGTCACCATTC 59.606 41.667 0.00 0.00 0.00 2.67
630 631 4.328536 TGCCAAATAGTAACGTCACCATT 58.671 39.130 0.00 0.00 0.00 3.16
631 632 3.938963 CTGCCAAATAGTAACGTCACCAT 59.061 43.478 0.00 0.00 0.00 3.55
632 633 3.244284 ACTGCCAAATAGTAACGTCACCA 60.244 43.478 0.00 0.00 0.00 4.17
633 634 3.332034 ACTGCCAAATAGTAACGTCACC 58.668 45.455 0.00 0.00 0.00 4.02
634 635 4.378046 CCAACTGCCAAATAGTAACGTCAC 60.378 45.833 0.00 0.00 0.00 3.67
635 636 3.749088 CCAACTGCCAAATAGTAACGTCA 59.251 43.478 0.00 0.00 0.00 4.35
636 637 3.425758 GCCAACTGCCAAATAGTAACGTC 60.426 47.826 0.00 0.00 0.00 4.34
637 638 2.486592 GCCAACTGCCAAATAGTAACGT 59.513 45.455 0.00 0.00 0.00 3.99
638 639 2.486203 TGCCAACTGCCAAATAGTAACG 59.514 45.455 0.00 0.00 40.16 3.18
639 640 3.506067 AGTGCCAACTGCCAAATAGTAAC 59.494 43.478 0.00 0.00 40.16 2.50
640 641 3.761897 AGTGCCAACTGCCAAATAGTAA 58.238 40.909 0.00 0.00 40.16 2.24
641 642 3.433306 AGTGCCAACTGCCAAATAGTA 57.567 42.857 0.00 0.00 40.16 1.82
642 643 2.292828 AGTGCCAACTGCCAAATAGT 57.707 45.000 0.00 0.00 40.16 2.12
643 644 3.347216 ACTAGTGCCAACTGCCAAATAG 58.653 45.455 0.00 0.00 40.16 1.73
644 645 3.244735 TGACTAGTGCCAACTGCCAAATA 60.245 43.478 0.00 0.00 40.16 1.40
645 646 2.162681 GACTAGTGCCAACTGCCAAAT 58.837 47.619 0.00 0.00 40.16 2.32
646 647 1.133945 TGACTAGTGCCAACTGCCAAA 60.134 47.619 0.00 0.00 40.16 3.28
647 648 0.472044 TGACTAGTGCCAACTGCCAA 59.528 50.000 0.00 0.00 40.16 4.52
648 649 0.692476 ATGACTAGTGCCAACTGCCA 59.308 50.000 0.00 0.00 40.16 4.92
649 650 1.470098 CAATGACTAGTGCCAACTGCC 59.530 52.381 0.00 0.00 40.16 4.85
650 651 2.154462 ACAATGACTAGTGCCAACTGC 58.846 47.619 0.00 0.00 37.19 4.40
651 652 3.565482 ACAACAATGACTAGTGCCAACTG 59.435 43.478 0.00 0.00 37.19 3.16
652 653 3.565482 CACAACAATGACTAGTGCCAACT 59.435 43.478 0.00 0.00 40.67 3.16
653 654 3.315191 ACACAACAATGACTAGTGCCAAC 59.685 43.478 0.00 0.00 33.69 3.77
654 655 3.550820 ACACAACAATGACTAGTGCCAA 58.449 40.909 0.00 0.00 33.69 4.52
655 656 3.207265 ACACAACAATGACTAGTGCCA 57.793 42.857 0.00 0.00 33.69 4.92
656 657 4.036262 TCAAACACAACAATGACTAGTGCC 59.964 41.667 0.00 0.00 33.69 5.01
657 658 4.970003 GTCAAACACAACAATGACTAGTGC 59.030 41.667 0.00 0.00 39.21 4.40
658 659 5.296780 AGGTCAAACACAACAATGACTAGTG 59.703 40.000 0.00 0.00 41.42 2.74
659 660 5.437060 AGGTCAAACACAACAATGACTAGT 58.563 37.500 0.00 0.00 41.42 2.57
660 661 6.183360 ACAAGGTCAAACACAACAATGACTAG 60.183 38.462 4.94 0.00 41.42 2.57
661 662 5.650266 ACAAGGTCAAACACAACAATGACTA 59.350 36.000 4.94 0.00 41.42 2.59
662 663 4.462483 ACAAGGTCAAACACAACAATGACT 59.538 37.500 4.94 0.00 41.42 3.41
663 664 4.743493 ACAAGGTCAAACACAACAATGAC 58.257 39.130 0.00 0.00 41.06 3.06
664 665 6.516739 TTACAAGGTCAAACACAACAATGA 57.483 33.333 0.00 0.00 0.00 2.57
665 666 7.769272 AATTACAAGGTCAAACACAACAATG 57.231 32.000 0.00 0.00 0.00 2.82
666 667 7.221838 CGAAATTACAAGGTCAAACACAACAAT 59.778 33.333 0.00 0.00 0.00 2.71
667 668 6.528423 CGAAATTACAAGGTCAAACACAACAA 59.472 34.615 0.00 0.00 0.00 2.83
668 669 6.030849 CGAAATTACAAGGTCAAACACAACA 58.969 36.000 0.00 0.00 0.00 3.33
669 670 5.051973 GCGAAATTACAAGGTCAAACACAAC 60.052 40.000 0.00 0.00 0.00 3.32
670 671 5.038033 GCGAAATTACAAGGTCAAACACAA 58.962 37.500 0.00 0.00 0.00 3.33
671 672 4.096532 TGCGAAATTACAAGGTCAAACACA 59.903 37.500 0.00 0.00 0.00 3.72
672 673 4.602995 TGCGAAATTACAAGGTCAAACAC 58.397 39.130 0.00 0.00 0.00 3.32
673 674 4.902443 TGCGAAATTACAAGGTCAAACA 57.098 36.364 0.00 0.00 0.00 2.83
674 675 5.388371 GCAATGCGAAATTACAAGGTCAAAC 60.388 40.000 0.00 0.00 0.00 2.93
675 676 4.683781 GCAATGCGAAATTACAAGGTCAAA 59.316 37.500 0.00 0.00 0.00 2.69
676 677 4.233789 GCAATGCGAAATTACAAGGTCAA 58.766 39.130 0.00 0.00 0.00 3.18
677 678 3.254411 TGCAATGCGAAATTACAAGGTCA 59.746 39.130 0.00 0.00 0.00 4.02
678 679 3.832276 TGCAATGCGAAATTACAAGGTC 58.168 40.909 0.00 0.00 0.00 3.85
679 680 3.255642 ACTGCAATGCGAAATTACAAGGT 59.744 39.130 0.00 0.00 0.00 3.50
680 681 3.836949 ACTGCAATGCGAAATTACAAGG 58.163 40.909 0.00 0.00 0.00 3.61
681 682 5.441872 CGAAACTGCAATGCGAAATTACAAG 60.442 40.000 0.00 0.00 0.00 3.16
682 683 4.381270 CGAAACTGCAATGCGAAATTACAA 59.619 37.500 0.00 0.00 0.00 2.41
683 684 3.911365 CGAAACTGCAATGCGAAATTACA 59.089 39.130 0.00 0.00 0.00 2.41
684 685 3.911964 ACGAAACTGCAATGCGAAATTAC 59.088 39.130 6.55 0.00 0.00 1.89
685 686 4.153958 ACGAAACTGCAATGCGAAATTA 57.846 36.364 6.55 0.00 0.00 1.40
686 687 3.011949 ACGAAACTGCAATGCGAAATT 57.988 38.095 6.55 0.00 0.00 1.82
687 688 2.704725 ACGAAACTGCAATGCGAAAT 57.295 40.000 6.55 0.00 0.00 2.17
688 689 3.610786 TTACGAAACTGCAATGCGAAA 57.389 38.095 6.55 0.00 0.00 3.46
689 690 3.822594 ATTACGAAACTGCAATGCGAA 57.177 38.095 6.55 0.00 0.00 4.70
690 691 5.478233 AATATTACGAAACTGCAATGCGA 57.522 34.783 6.55 0.00 0.00 5.10
691 692 5.511377 ACAAATATTACGAAACTGCAATGCG 59.489 36.000 0.00 0.00 0.00 4.73
692 693 6.869421 ACAAATATTACGAAACTGCAATGC 57.131 33.333 0.00 0.00 0.00 3.56
693 694 7.683676 GCAAACAAATATTACGAAACTGCAATG 59.316 33.333 0.00 0.00 0.00 2.82
694 695 7.383572 TGCAAACAAATATTACGAAACTGCAAT 59.616 29.630 0.00 0.00 32.42 3.56
695 696 6.697455 TGCAAACAAATATTACGAAACTGCAA 59.303 30.769 0.00 0.00 32.42 4.08
696 697 6.209361 TGCAAACAAATATTACGAAACTGCA 58.791 32.000 0.00 0.00 32.88 4.41
697 698 6.683090 TGCAAACAAATATTACGAAACTGC 57.317 33.333 0.00 0.00 0.00 4.40
698 699 9.726034 GAATTGCAAACAAATATTACGAAACTG 57.274 29.630 1.71 0.00 39.77 3.16
699 700 9.469807 TGAATTGCAAACAAATATTACGAAACT 57.530 25.926 1.71 0.00 39.77 2.66
700 701 9.511022 GTGAATTGCAAACAAATATTACGAAAC 57.489 29.630 1.71 0.00 39.77 2.78
701 702 9.469807 AGTGAATTGCAAACAAATATTACGAAA 57.530 25.926 1.71 0.00 39.77 3.46
702 703 9.123709 GAGTGAATTGCAAACAAATATTACGAA 57.876 29.630 1.71 0.00 39.77 3.85
703 704 7.480229 CGAGTGAATTGCAAACAAATATTACGA 59.520 33.333 1.71 0.00 39.77 3.43
704 705 7.253288 CCGAGTGAATTGCAAACAAATATTACG 60.253 37.037 1.71 0.68 39.77 3.18
705 706 7.462724 GCCGAGTGAATTGCAAACAAATATTAC 60.463 37.037 1.71 0.00 39.77 1.89
706 707 6.529829 GCCGAGTGAATTGCAAACAAATATTA 59.470 34.615 1.71 0.00 39.77 0.98
707 708 5.348451 GCCGAGTGAATTGCAAACAAATATT 59.652 36.000 1.71 0.00 39.77 1.28
708 709 4.864247 GCCGAGTGAATTGCAAACAAATAT 59.136 37.500 1.71 0.00 39.77 1.28
709 710 4.233789 GCCGAGTGAATTGCAAACAAATA 58.766 39.130 1.71 0.00 39.77 1.40
710 711 3.059166 GCCGAGTGAATTGCAAACAAAT 58.941 40.909 1.71 0.00 39.77 2.32
711 712 2.159184 TGCCGAGTGAATTGCAAACAAA 60.159 40.909 1.71 0.00 39.77 2.83
712 713 1.406898 TGCCGAGTGAATTGCAAACAA 59.593 42.857 1.71 0.00 40.87 2.83
713 714 1.028130 TGCCGAGTGAATTGCAAACA 58.972 45.000 1.71 4.25 0.00 2.83
714 715 2.352503 ATGCCGAGTGAATTGCAAAC 57.647 45.000 1.71 0.00 37.27 2.93
715 716 3.066621 GGATATGCCGAGTGAATTGCAAA 59.933 43.478 1.71 0.00 37.27 3.68
716 717 2.618241 GGATATGCCGAGTGAATTGCAA 59.382 45.455 0.00 0.00 37.27 4.08
717 718 2.221169 GGATATGCCGAGTGAATTGCA 58.779 47.619 0.00 0.00 38.23 4.08
718 719 2.977405 GGATATGCCGAGTGAATTGC 57.023 50.000 0.00 0.00 0.00 3.56
751 752 2.892425 CGAGGTGCTGATTCCGGC 60.892 66.667 0.00 0.00 44.86 6.13
752 753 2.892425 GCGAGGTGCTGATTCCGG 60.892 66.667 0.00 0.00 41.73 5.14
753 754 2.892425 GGCGAGGTGCTGATTCCG 60.892 66.667 0.00 0.00 45.43 4.30
772 773 0.250640 GGGATATGCAGCAGGAGGTG 60.251 60.000 0.00 0.00 45.83 4.00
773 774 0.695462 TGGGATATGCAGCAGGAGGT 60.695 55.000 0.00 0.00 0.00 3.85
774 775 0.250640 GTGGGATATGCAGCAGGAGG 60.251 60.000 0.00 0.00 0.00 4.30
775 776 0.602106 CGTGGGATATGCAGCAGGAG 60.602 60.000 0.00 0.00 0.00 3.69
776 777 1.447217 CGTGGGATATGCAGCAGGA 59.553 57.895 0.00 0.00 0.00 3.86
777 778 2.256591 GCGTGGGATATGCAGCAGG 61.257 63.158 0.00 0.00 41.11 4.85
778 779 2.601398 CGCGTGGGATATGCAGCAG 61.601 63.158 0.00 0.00 41.53 4.24
779 780 2.588596 CGCGTGGGATATGCAGCA 60.589 61.111 0.00 0.00 41.53 4.41
780 781 3.349006 CCGCGTGGGATATGCAGC 61.349 66.667 7.26 0.00 41.53 5.25
781 782 3.349006 GCCGCGTGGGATATGCAG 61.349 66.667 18.41 0.00 41.53 4.41
783 784 4.961511 TCGCCGCGTGGGATATGC 62.962 66.667 18.41 0.00 38.47 3.14
784 785 1.626654 GAATCGCCGCGTGGGATATG 61.627 60.000 18.41 0.00 45.16 1.78
785 786 1.374252 GAATCGCCGCGTGGGATAT 60.374 57.895 18.41 14.05 45.16 1.63
786 787 2.028484 GAATCGCCGCGTGGGATA 59.972 61.111 18.41 0.00 45.16 2.59
791 792 3.210419 GATTCCGAATCGCCGCGTG 62.210 63.158 13.39 0.00 0.00 5.34
792 793 2.960129 GATTCCGAATCGCCGCGT 60.960 61.111 13.39 0.00 0.00 6.01
793 794 2.932083 CTGATTCCGAATCGCCGCG 61.932 63.158 14.92 6.39 40.84 6.46
794 795 2.931386 CTGATTCCGAATCGCCGC 59.069 61.111 14.92 0.00 40.84 6.53
795 796 1.224069 ATGCTGATTCCGAATCGCCG 61.224 55.000 23.22 13.85 40.84 6.46
796 797 0.514691 GATGCTGATTCCGAATCGCC 59.485 55.000 23.22 14.97 40.84 5.54
797 798 0.514691 GGATGCTGATTCCGAATCGC 59.485 55.000 21.16 21.16 40.84 4.58
804 805 1.595382 CGGTCCGGATGCTGATTCC 60.595 63.158 7.81 0.00 0.00 3.01
805 806 4.033894 CGGTCCGGATGCTGATTC 57.966 61.111 7.81 0.00 0.00 2.52
826 827 2.554370 TTTCTAGGTTGACCCGTTGG 57.446 50.000 0.00 0.00 38.74 3.77
827 828 4.324267 AGATTTTCTAGGTTGACCCGTTG 58.676 43.478 0.00 0.00 38.74 4.10
828 829 4.635699 AGATTTTCTAGGTTGACCCGTT 57.364 40.909 0.00 0.00 38.74 4.44
829 830 4.324267 CAAGATTTTCTAGGTTGACCCGT 58.676 43.478 0.00 0.00 38.74 5.28
830 831 3.127030 GCAAGATTTTCTAGGTTGACCCG 59.873 47.826 0.00 0.00 38.74 5.28
831 832 3.444034 GGCAAGATTTTCTAGGTTGACCC 59.556 47.826 0.00 0.00 36.42 4.46
832 833 3.127030 CGGCAAGATTTTCTAGGTTGACC 59.873 47.826 0.00 0.00 0.00 4.02
833 834 3.127030 CCGGCAAGATTTTCTAGGTTGAC 59.873 47.826 0.00 0.00 0.00 3.18
834 835 3.343617 CCGGCAAGATTTTCTAGGTTGA 58.656 45.455 0.00 0.00 0.00 3.18
835 836 2.159379 GCCGGCAAGATTTTCTAGGTTG 60.159 50.000 24.80 0.00 0.00 3.77
836 837 2.092323 GCCGGCAAGATTTTCTAGGTT 58.908 47.619 24.80 0.00 0.00 3.50
837 838 1.751437 GCCGGCAAGATTTTCTAGGT 58.249 50.000 24.80 0.00 0.00 3.08
838 839 0.657840 CGCCGGCAAGATTTTCTAGG 59.342 55.000 28.98 0.12 0.00 3.02
839 840 0.028110 GCGCCGGCAAGATTTTCTAG 59.972 55.000 28.98 6.18 39.62 2.43
840 841 1.701545 CGCGCCGGCAAGATTTTCTA 61.702 55.000 28.98 0.00 39.92 2.10
841 842 2.877691 GCGCCGGCAAGATTTTCT 59.122 55.556 28.98 0.00 39.62 2.52
842 843 2.576847 CGCGCCGGCAAGATTTTC 60.577 61.111 28.98 3.17 39.92 2.29
843 844 3.053291 TCGCGCCGGCAAGATTTT 61.053 55.556 28.98 0.00 39.92 1.82
844 845 3.799755 GTCGCGCCGGCAAGATTT 61.800 61.111 28.98 0.00 39.92 2.17
958 986 3.550431 GCCATAGGAGAGCGGGCA 61.550 66.667 0.00 0.00 44.01 5.36
963 998 0.105778 GTCACAGGCCATAGGAGAGC 59.894 60.000 5.01 0.00 0.00 4.09
1212 1259 2.747855 GACTTGGAGGCGGCCTTG 60.748 66.667 24.71 15.54 31.76 3.61
1213 1260 4.035102 GGACTTGGAGGCGGCCTT 62.035 66.667 24.71 6.40 31.76 4.35
1214 1261 3.618855 TAGGACTTGGAGGCGGCCT 62.619 63.158 24.13 24.13 36.03 5.19
1215 1262 3.081409 TAGGACTTGGAGGCGGCC 61.081 66.667 12.11 12.11 0.00 6.13
1216 1263 2.180159 TTGTAGGACTTGGAGGCGGC 62.180 60.000 0.00 0.00 0.00 6.53
1217 1264 0.108138 CTTGTAGGACTTGGAGGCGG 60.108 60.000 0.00 0.00 0.00 6.13
1218 1265 0.108138 CCTTGTAGGACTTGGAGGCG 60.108 60.000 0.00 0.00 37.67 5.52
1219 1266 0.393132 GCCTTGTAGGACTTGGAGGC 60.393 60.000 0.00 0.00 42.35 4.70
1220 1267 0.108138 CGCCTTGTAGGACTTGGAGG 60.108 60.000 0.00 0.00 37.67 4.30
1221 1268 0.108138 CCGCCTTGTAGGACTTGGAG 60.108 60.000 0.00 0.00 37.67 3.86
1222 1269 1.980052 CCGCCTTGTAGGACTTGGA 59.020 57.895 0.00 0.00 37.67 3.53
1223 1270 1.745489 GCCGCCTTGTAGGACTTGG 60.745 63.158 0.00 0.00 37.67 3.61
1644 1706 3.822192 GATTTTGCGGACCCGGCC 61.822 66.667 10.70 0.00 40.19 6.13
1653 1715 0.171903 CCTGGGCTTCAGATTTTGCG 59.828 55.000 8.75 0.00 46.18 4.85
1689 1751 0.523546 CCATCTCGACGACAGTTCCG 60.524 60.000 0.00 0.00 0.00 4.30
1746 1808 1.606531 GAGGCAGAGCAACAGGGAT 59.393 57.895 0.00 0.00 0.00 3.85
1773 1835 3.317109 CCATCTCAGGCAGGCAGA 58.683 61.111 0.00 0.00 0.00 4.26
1828 1890 8.257306 TCTGATGATATAAGCAACTGTACAACA 58.743 33.333 0.00 0.00 0.00 3.33
1875 1937 8.344098 GCAAACATTGGATCAAAATTGAAAAGA 58.656 29.630 9.41 0.00 41.13 2.52
1989 2057 1.539827 GGAGTGCACATAAACCACCAC 59.460 52.381 21.04 0.00 0.00 4.16
1990 2058 1.423541 AGGAGTGCACATAAACCACCA 59.576 47.619 21.04 0.00 0.00 4.17
2002 2070 1.053835 TGGTGGAGACAAGGAGTGCA 61.054 55.000 0.00 0.00 46.06 4.57
2003 2071 0.326264 ATGGTGGAGACAAGGAGTGC 59.674 55.000 0.00 0.00 46.06 4.40
2016 2084 6.357367 AGCTAACTGAAAAGGTATATGGTGG 58.643 40.000 0.00 0.00 0.00 4.61
2120 2194 2.683211 ACTGGAAGGTGGAAGCATTT 57.317 45.000 0.00 0.00 39.30 2.32
2228 2305 0.944386 TCTGAAACTGAAACGCTGCC 59.056 50.000 0.00 0.00 0.00 4.85
2233 2310 7.969387 TTTCATTCTTTCTGAAACTGAAACG 57.031 32.000 17.80 10.14 38.08 3.60
2283 2360 0.396435 ATCGGCAGTTGGTTGACAGA 59.604 50.000 0.00 0.00 0.00 3.41
2288 2365 4.701956 ATAGAAAATCGGCAGTTGGTTG 57.298 40.909 0.00 0.00 0.00 3.77
2339 2416 4.151121 TCAATTGATGGGTTTCAGCTTGA 58.849 39.130 3.38 0.00 31.86 3.02
2398 2475 3.510360 AGTAACGCTAAGAGTGTGGTGAT 59.490 43.478 0.00 0.00 38.11 3.06
2452 2529 4.950050 ACTGAAAGGTGAAGTAGACACAG 58.050 43.478 0.00 0.00 39.30 3.66
2458 2535 7.883217 TGTAGTAGAACTGAAAGGTGAAGTAG 58.117 38.462 0.00 0.00 39.30 2.57
2501 2584 8.790718 ACTTATGATTCATTTCAGATACATGCC 58.209 33.333 4.14 0.00 0.00 4.40
2555 2638 4.042809 CCCATTGTACAGGCCCAAGATATA 59.957 45.833 0.00 0.00 0.00 0.86
2556 2639 3.181429 CCCATTGTACAGGCCCAAGATAT 60.181 47.826 0.00 0.00 0.00 1.63
2636 2720 5.219739 AGGATTCTGAACTATTCTAGGCCA 58.780 41.667 5.01 0.00 0.00 5.36
2678 2764 5.234116 CAGAAAATGAGAAAAACAAACGGGG 59.766 40.000 0.00 0.00 0.00 5.73
2741 2827 0.238553 GTGGCAAAAAGAGAGCGACC 59.761 55.000 0.00 0.00 31.91 4.79
2744 2830 2.808543 AGTTAGTGGCAAAAAGAGAGCG 59.191 45.455 0.00 0.00 0.00 5.03


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.