Multiple sequence alignment - TraesCS5A01G488500

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G488500 chr5A 100.000 3452 0 0 1 3452 658563716 658560265 0.000000e+00 6375.0
1 TraesCS5A01G488500 chr5A 94.928 276 14 0 60 335 658587791 658587516 1.900000e-117 433.0
2 TraesCS5A01G488500 chr5A 95.775 71 3 0 1 71 8678381 8678451 7.830000e-22 115.0
3 TraesCS5A01G488500 chr5A 91.892 74 4 2 515 588 573835012 573834941 6.100000e-18 102.0
4 TraesCS5A01G488500 chr5A 88.000 75 9 0 515 589 681453136 681453062 4.750000e-14 89.8
5 TraesCS5A01G488500 chr5A 83.562 73 12 0 515 587 444261209 444261137 6.180000e-08 69.4
6 TraesCS5A01G488500 chr5D 89.282 2006 113 55 665 2604 530365492 530363523 0.000000e+00 2420.0
7 TraesCS5A01G488500 chr5D 82.422 677 85 20 2796 3452 475528917 475529579 8.370000e-156 560.0
8 TraesCS5A01G488500 chr5D 95.200 125 5 1 2599 2723 530363454 530363331 2.720000e-46 196.0
9 TraesCS5A01G488500 chr5B 90.899 1736 95 23 898 2604 669452476 669450775 0.000000e+00 2272.0
10 TraesCS5A01G488500 chr5B 89.600 125 6 1 2599 2723 669450706 669450589 5.970000e-33 152.0
11 TraesCS5A01G488500 chr5B 98.507 67 0 1 1 67 196525690 196525755 2.180000e-22 117.0
12 TraesCS5A01G488500 chr6D 84.741 675 79 12 2795 3452 339447940 339448607 0.000000e+00 654.0
13 TraesCS5A01G488500 chr6D 83.634 666 82 15 2805 3452 71120043 71119387 4.930000e-168 601.0
14 TraesCS5A01G488500 chr6D 85.864 573 69 11 2796 3360 468660496 468661064 1.770000e-167 599.0
15 TraesCS5A01G488500 chr6D 98.438 64 1 0 1 64 190704413 190704350 2.820000e-21 113.0
16 TraesCS5A01G488500 chr6D 100.000 61 0 0 1 61 193165194 193165134 2.820000e-21 113.0
17 TraesCS5A01G488500 chr6D 85.915 71 10 0 515 585 105425649 105425579 3.690000e-10 76.8
18 TraesCS5A01G488500 chr2D 82.963 675 87 22 2796 3452 130785089 130785753 4.960000e-163 584.0
19 TraesCS5A01G488500 chr2D 81.832 666 97 18 2796 3452 422770187 422769537 3.920000e-149 538.0
20 TraesCS5A01G488500 chr2D 96.552 261 7 2 60 320 476999166 476998908 6.840000e-117 431.0
21 TraesCS5A01G488500 chr2D 94.465 271 11 4 60 329 111198875 111199142 6.890000e-112 414.0
22 TraesCS5A01G488500 chr3D 83.208 667 79 19 2807 3451 302240653 302239998 6.420000e-162 580.0
23 TraesCS5A01G488500 chr3D 84.480 567 68 17 2903 3452 302240661 302241224 3.030000e-150 542.0
24 TraesCS5A01G488500 chr3D 95.833 72 2 1 1 72 410706739 410706809 7.830000e-22 115.0
25 TraesCS5A01G488500 chr3D 87.931 58 4 3 533 589 364984964 364985019 8.000000e-07 65.8
26 TraesCS5A01G488500 chr3D 87.500 56 6 1 512 567 300133272 300133326 2.880000e-06 63.9
27 TraesCS5A01G488500 chr3B 82.036 668 83 22 2807 3452 129430617 129431269 5.070000e-148 534.0
28 TraesCS5A01G488500 chr3B 86.713 429 49 7 3027 3452 176630181 176629758 1.450000e-128 470.0
29 TraesCS5A01G488500 chr3B 85.780 436 55 7 3023 3452 418730147 418730581 4.060000e-124 455.0
30 TraesCS5A01G488500 chr3B 87.838 74 9 0 515 588 141802864 141802791 1.710000e-13 87.9
31 TraesCS5A01G488500 chr6B 80.031 641 99 25 2824 3452 19931364 19930741 6.800000e-122 448.0
32 TraesCS5A01G488500 chr6B 80.128 624 96 23 2841 3452 19950767 19950160 1.140000e-119 440.0
33 TraesCS5A01G488500 chr6B 93.773 273 17 0 60 332 496643700 496643428 8.920000e-111 411.0
34 TraesCS5A01G488500 chr1D 94.386 285 13 3 60 344 426422453 426422172 5.290000e-118 435.0
35 TraesCS5A01G488500 chr1D 95.588 68 2 1 1 68 365658440 365658374 1.310000e-19 108.0
36 TraesCS5A01G488500 chr1D 89.062 64 5 2 527 590 341041373 341041312 1.030000e-10 78.7
37 TraesCS5A01G488500 chr7D 96.850 254 8 0 60 313 155643586 155643839 3.180000e-115 425.0
38 TraesCS5A01G488500 chr7D 100.000 62 0 0 1 62 161615623 161615684 7.830000e-22 115.0
39 TraesCS5A01G488500 chr7D 85.915 71 10 0 515 585 14435959 14435889 3.690000e-10 76.8
40 TraesCS5A01G488500 chr7A 94.203 276 15 1 60 335 557945039 557945313 1.480000e-113 420.0
41 TraesCS5A01G488500 chr6A 94.505 273 14 1 60 332 510749274 510749003 1.480000e-113 420.0
42 TraesCS5A01G488500 chr2A 92.150 293 21 2 60 352 647696214 647695924 2.480000e-111 412.0
43 TraesCS5A01G488500 chr2A 92.958 71 4 1 515 585 386974773 386974842 6.100000e-18 102.0
44 TraesCS5A01G488500 chr1B 78.972 428 61 23 2796 3209 95674480 95674892 7.350000e-67 265.0
45 TraesCS5A01G488500 chr1B 94.643 56 1 2 530 584 301046859 301046913 6.140000e-13 86.1
46 TraesCS5A01G488500 chr7B 98.485 66 1 0 1 66 409463281 409463216 2.180000e-22 117.0
47 TraesCS5A01G488500 chr3A 97.059 68 2 0 1 68 539113579 539113512 7.830000e-22 115.0
48 TraesCS5A01G488500 chr3A 92.000 75 5 1 515 588 144444066 144443992 1.690000e-18 104.0
49 TraesCS5A01G488500 chr4B 85.870 92 10 1 1403 1494 593393177 593393089 1.020000e-15 95.3
50 TraesCS5A01G488500 chr4B 89.091 55 6 0 534 588 89406618 89406564 6.180000e-08 69.4
51 TraesCS5A01G488500 chr2B 92.188 64 3 2 527 590 655526992 655526931 4.750000e-14 89.8
52 TraesCS5A01G488500 chr4D 87.931 58 7 0 531 588 61128089 61128146 6.180000e-08 69.4
53 TraesCS5A01G488500 chr1A 82.895 76 13 0 515 590 133174239 133174164 6.180000e-08 69.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G488500 chr5A 658560265 658563716 3451 True 6375 6375 100.0000 1 3452 1 chr5A.!!$R3 3451
1 TraesCS5A01G488500 chr5D 530363331 530365492 2161 True 1308 2420 92.2410 665 2723 2 chr5D.!!$R1 2058
2 TraesCS5A01G488500 chr5D 475528917 475529579 662 False 560 560 82.4220 2796 3452 1 chr5D.!!$F1 656
3 TraesCS5A01G488500 chr5B 669450589 669452476 1887 True 1212 2272 90.2495 898 2723 2 chr5B.!!$R1 1825
4 TraesCS5A01G488500 chr6D 339447940 339448607 667 False 654 654 84.7410 2795 3452 1 chr6D.!!$F1 657
5 TraesCS5A01G488500 chr6D 71119387 71120043 656 True 601 601 83.6340 2805 3452 1 chr6D.!!$R1 647
6 TraesCS5A01G488500 chr6D 468660496 468661064 568 False 599 599 85.8640 2796 3360 1 chr6D.!!$F2 564
7 TraesCS5A01G488500 chr2D 130785089 130785753 664 False 584 584 82.9630 2796 3452 1 chr2D.!!$F2 656
8 TraesCS5A01G488500 chr2D 422769537 422770187 650 True 538 538 81.8320 2796 3452 1 chr2D.!!$R1 656
9 TraesCS5A01G488500 chr3D 302239998 302240653 655 True 580 580 83.2080 2807 3451 1 chr3D.!!$R1 644
10 TraesCS5A01G488500 chr3D 302240661 302241224 563 False 542 542 84.4800 2903 3452 1 chr3D.!!$F2 549
11 TraesCS5A01G488500 chr3B 129430617 129431269 652 False 534 534 82.0360 2807 3452 1 chr3B.!!$F1 645
12 TraesCS5A01G488500 chr6B 19930741 19931364 623 True 448 448 80.0310 2824 3452 1 chr6B.!!$R1 628
13 TraesCS5A01G488500 chr6B 19950160 19950767 607 True 440 440 80.1280 2841 3452 1 chr6B.!!$R2 611

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
223 224 0.100682 TCTATTGTCGTGCCTCTCGC 59.899 55.0 0.00 0.00 38.31 5.03 F
397 398 0.108186 CTGGGTTGCATCGCTAGTGA 60.108 55.0 8.75 8.75 0.00 3.41 F
1156 1222 0.108207 CACCTCCATCATCTCCCTGC 59.892 60.0 0.00 0.00 0.00 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1904 1982 0.107268 TGTGAGCAGAGCAGAAGCAA 59.893 50.0 0.0 0.0 45.49 3.91 R
2076 2157 0.249911 AGCAGGCGAACGTCTTCTTT 60.250 50.0 0.0 0.0 0.00 2.52 R
2771 2932 0.114560 AGACCTCCAAGACTTCCCGA 59.885 55.0 0.0 0.0 0.00 5.14 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.251869 CATCACCATGTTCTTGCGTG 57.748 50.000 0.00 0.00 0.00 5.34
20 21 1.536766 CATCACCATGTTCTTGCGTGT 59.463 47.619 0.00 0.00 0.00 4.49
21 22 0.943673 TCACCATGTTCTTGCGTGTG 59.056 50.000 0.00 0.00 0.00 3.82
22 23 0.661187 CACCATGTTCTTGCGTGTGC 60.661 55.000 0.00 0.00 43.20 4.57
29 30 0.249531 TTCTTGCGTGTGCGTAGGAA 60.250 50.000 0.00 0.00 43.66 3.36
30 31 1.606994 TTCTTGCGTGTGCGTAGGAAT 60.607 47.619 0.00 0.00 41.85 3.01
31 32 3.125956 TTCTTGCGTGTGCGTAGGAATT 61.126 45.455 0.00 0.00 41.85 2.17
32 33 4.600978 TTCTTGCGTGTGCGTAGGAATTT 61.601 43.478 0.00 0.00 41.85 1.82
33 34 6.037412 TTCTTGCGTGTGCGTAGGAATTTT 62.037 41.667 0.00 0.00 41.85 1.82
34 35 2.325509 GCGTGTGCGTAGGAATTTTT 57.674 45.000 0.00 0.00 40.81 1.94
55 56 6.956202 TTTTTGAAATTACTACGTTCCCCA 57.044 33.333 0.00 0.00 0.00 4.96
56 57 6.956202 TTTTGAAATTACTACGTTCCCCAA 57.044 33.333 0.00 0.00 0.00 4.12
57 58 5.945466 TTGAAATTACTACGTTCCCCAAC 57.055 39.130 0.00 0.00 0.00 3.77
58 59 4.970711 TGAAATTACTACGTTCCCCAACA 58.029 39.130 0.00 0.00 32.14 3.33
59 60 4.998672 TGAAATTACTACGTTCCCCAACAG 59.001 41.667 0.00 0.00 32.14 3.16
60 61 4.628963 AATTACTACGTTCCCCAACAGT 57.371 40.909 0.00 0.00 32.14 3.55
61 62 4.628963 ATTACTACGTTCCCCAACAGTT 57.371 40.909 0.00 0.00 32.14 3.16
62 63 5.743636 ATTACTACGTTCCCCAACAGTTA 57.256 39.130 0.00 0.00 32.14 2.24
63 64 5.743636 TTACTACGTTCCCCAACAGTTAT 57.256 39.130 0.00 0.00 32.14 1.89
64 65 4.628963 ACTACGTTCCCCAACAGTTATT 57.371 40.909 0.00 0.00 32.14 1.40
65 66 4.976864 ACTACGTTCCCCAACAGTTATTT 58.023 39.130 0.00 0.00 32.14 1.40
66 67 5.379187 ACTACGTTCCCCAACAGTTATTTT 58.621 37.500 0.00 0.00 32.14 1.82
67 68 6.532826 ACTACGTTCCCCAACAGTTATTTTA 58.467 36.000 0.00 0.00 32.14 1.52
68 69 7.170277 ACTACGTTCCCCAACAGTTATTTTAT 58.830 34.615 0.00 0.00 32.14 1.40
69 70 6.505044 ACGTTCCCCAACAGTTATTTTATC 57.495 37.500 0.00 0.00 32.14 1.75
70 71 6.005198 ACGTTCCCCAACAGTTATTTTATCA 58.995 36.000 0.00 0.00 32.14 2.15
71 72 6.661805 ACGTTCCCCAACAGTTATTTTATCAT 59.338 34.615 0.00 0.00 32.14 2.45
72 73 6.972328 CGTTCCCCAACAGTTATTTTATCATG 59.028 38.462 0.00 0.00 32.14 3.07
73 74 7.264947 GTTCCCCAACAGTTATTTTATCATGG 58.735 38.462 0.00 0.00 32.14 3.66
74 75 6.736581 TCCCCAACAGTTATTTTATCATGGA 58.263 36.000 0.00 0.00 0.00 3.41
75 76 7.361438 TCCCCAACAGTTATTTTATCATGGAT 58.639 34.615 0.00 0.00 0.00 3.41
76 77 7.505585 TCCCCAACAGTTATTTTATCATGGATC 59.494 37.037 0.00 0.00 0.00 3.36
77 78 7.287466 CCCCAACAGTTATTTTATCATGGATCA 59.713 37.037 0.00 0.00 0.00 2.92
78 79 8.355169 CCCAACAGTTATTTTATCATGGATCAG 58.645 37.037 0.00 0.00 0.00 2.90
79 80 7.864379 CCAACAGTTATTTTATCATGGATCAGC 59.136 37.037 0.00 0.00 0.00 4.26
80 81 8.407832 CAACAGTTATTTTATCATGGATCAGCA 58.592 33.333 0.00 0.00 0.00 4.41
81 82 8.701908 ACAGTTATTTTATCATGGATCAGCAT 57.298 30.769 0.00 0.00 0.00 3.79
82 83 9.797642 ACAGTTATTTTATCATGGATCAGCATA 57.202 29.630 0.00 0.00 0.00 3.14
108 109 8.833231 TTTGCATTCAAATTTAACCGGATTAA 57.167 26.923 9.46 6.80 37.28 1.40
109 110 8.833231 TTGCATTCAAATTTAACCGGATTAAA 57.167 26.923 9.46 15.57 44.83 1.52
121 122 9.465985 TTTAACCGGATTAAATTGAACTTGAAC 57.534 29.630 9.46 0.00 37.75 3.18
122 123 6.642707 ACCGGATTAAATTGAACTTGAACA 57.357 33.333 9.46 0.00 0.00 3.18
123 124 7.045126 ACCGGATTAAATTGAACTTGAACAA 57.955 32.000 9.46 0.00 0.00 2.83
124 125 6.921307 ACCGGATTAAATTGAACTTGAACAAC 59.079 34.615 9.46 0.00 0.00 3.32
125 126 7.145323 CCGGATTAAATTGAACTTGAACAACT 58.855 34.615 0.00 0.00 0.00 3.16
126 127 7.114811 CCGGATTAAATTGAACTTGAACAACTG 59.885 37.037 0.00 0.00 0.00 3.16
127 128 7.358352 CGGATTAAATTGAACTTGAACAACTGC 60.358 37.037 0.00 0.00 0.00 4.40
128 129 7.653311 GGATTAAATTGAACTTGAACAACTGCT 59.347 33.333 0.00 0.00 0.00 4.24
129 130 7.754069 TTAAATTGAACTTGAACAACTGCTG 57.246 32.000 0.00 0.00 0.00 4.41
130 131 3.781079 TTGAACTTGAACAACTGCTGG 57.219 42.857 0.00 0.00 0.00 4.85
131 132 1.405105 TGAACTTGAACAACTGCTGGC 59.595 47.619 0.00 0.00 0.00 4.85
132 133 1.678101 GAACTTGAACAACTGCTGGCT 59.322 47.619 0.00 0.00 0.00 4.75
133 134 1.027357 ACTTGAACAACTGCTGGCTG 58.973 50.000 0.00 0.00 0.00 4.85
134 135 1.311859 CTTGAACAACTGCTGGCTGA 58.688 50.000 6.47 0.00 0.00 4.26
135 136 1.266175 CTTGAACAACTGCTGGCTGAG 59.734 52.381 6.47 1.87 0.00 3.35
136 137 0.181114 TGAACAACTGCTGGCTGAGT 59.819 50.000 6.47 2.41 0.00 3.41
137 138 0.871057 GAACAACTGCTGGCTGAGTC 59.129 55.000 6.47 0.00 0.00 3.36
138 139 0.181114 AACAACTGCTGGCTGAGTCA 59.819 50.000 6.47 0.00 0.00 3.41
139 140 0.399454 ACAACTGCTGGCTGAGTCAT 59.601 50.000 6.47 0.00 0.00 3.06
140 141 0.803117 CAACTGCTGGCTGAGTCATG 59.197 55.000 6.47 0.00 0.00 3.07
141 142 0.322277 AACTGCTGGCTGAGTCATGG 60.322 55.000 6.47 0.00 0.00 3.66
142 143 1.298993 CTGCTGGCTGAGTCATGGT 59.701 57.895 0.00 0.00 0.00 3.55
143 144 1.002990 TGCTGGCTGAGTCATGGTG 60.003 57.895 0.00 0.00 0.00 4.17
144 145 2.404995 GCTGGCTGAGTCATGGTGC 61.405 63.158 0.00 0.00 0.00 5.01
145 146 1.748122 CTGGCTGAGTCATGGTGCC 60.748 63.158 12.97 12.97 43.49 5.01
146 147 2.352422 GGCTGAGTCATGGTGCCA 59.648 61.111 14.56 0.00 42.79 4.92
147 148 2.042831 GGCTGAGTCATGGTGCCAC 61.043 63.158 14.56 0.00 42.79 5.01
148 149 2.042831 GCTGAGTCATGGTGCCACC 61.043 63.158 7.01 7.01 39.22 4.61
157 158 3.469564 TGGTGCCACCATATCGAAC 57.530 52.632 13.83 0.00 44.79 3.95
158 159 0.908910 TGGTGCCACCATATCGAACT 59.091 50.000 13.83 0.00 44.79 3.01
159 160 1.299541 GGTGCCACCATATCGAACTG 58.700 55.000 9.55 0.00 38.42 3.16
160 161 1.134521 GGTGCCACCATATCGAACTGA 60.135 52.381 9.55 0.00 38.42 3.41
161 162 1.933853 GTGCCACCATATCGAACTGAC 59.066 52.381 0.00 0.00 0.00 3.51
162 163 1.134521 TGCCACCATATCGAACTGACC 60.135 52.381 0.00 0.00 0.00 4.02
163 164 1.134521 GCCACCATATCGAACTGACCA 60.135 52.381 0.00 0.00 0.00 4.02
164 165 2.826428 CCACCATATCGAACTGACCAG 58.174 52.381 0.00 0.00 0.00 4.00
165 166 2.168521 CCACCATATCGAACTGACCAGT 59.831 50.000 0.00 0.00 44.94 4.00
166 167 3.190079 CACCATATCGAACTGACCAGTG 58.810 50.000 3.13 0.00 41.58 3.66
167 168 2.205074 CCATATCGAACTGACCAGTGC 58.795 52.381 3.13 0.41 41.58 4.40
168 169 2.418609 CCATATCGAACTGACCAGTGCA 60.419 50.000 8.71 0.00 41.58 4.57
169 170 3.261580 CATATCGAACTGACCAGTGCAA 58.738 45.455 8.71 0.00 41.58 4.08
170 171 1.512926 ATCGAACTGACCAGTGCAAC 58.487 50.000 8.71 0.00 41.58 4.17
171 172 0.531974 TCGAACTGACCAGTGCAACC 60.532 55.000 8.71 0.00 41.58 3.77
172 173 0.813610 CGAACTGACCAGTGCAACCA 60.814 55.000 8.71 0.00 41.58 3.67
173 174 0.663153 GAACTGACCAGTGCAACCAC 59.337 55.000 3.13 0.00 41.58 4.16
174 175 1.095228 AACTGACCAGTGCAACCACG 61.095 55.000 3.13 0.00 46.62 4.94
175 176 2.896801 CTGACCAGTGCAACCACGC 61.897 63.158 0.00 0.00 46.62 5.34
176 177 2.591715 GACCAGTGCAACCACGCT 60.592 61.111 0.00 0.00 46.62 5.07
177 178 2.124320 ACCAGTGCAACCACGCTT 60.124 55.556 0.00 0.00 46.62 4.68
178 179 0.882927 GACCAGTGCAACCACGCTTA 60.883 55.000 0.00 0.00 46.62 3.09
179 180 0.250727 ACCAGTGCAACCACGCTTAT 60.251 50.000 0.00 0.00 46.62 1.73
180 181 0.447801 CCAGTGCAACCACGCTTATC 59.552 55.000 0.00 0.00 46.62 1.75
181 182 1.442769 CAGTGCAACCACGCTTATCT 58.557 50.000 0.00 0.00 46.62 1.98
182 183 1.806542 CAGTGCAACCACGCTTATCTT 59.193 47.619 0.00 0.00 46.62 2.40
183 184 2.226437 CAGTGCAACCACGCTTATCTTT 59.774 45.455 0.00 0.00 46.62 2.52
184 185 3.435327 CAGTGCAACCACGCTTATCTTTA 59.565 43.478 0.00 0.00 46.62 1.85
185 186 4.094887 CAGTGCAACCACGCTTATCTTTAT 59.905 41.667 0.00 0.00 46.62 1.40
186 187 4.094887 AGTGCAACCACGCTTATCTTTATG 59.905 41.667 0.00 0.00 46.62 1.90
187 188 3.376859 TGCAACCACGCTTATCTTTATGG 59.623 43.478 0.00 0.00 0.00 2.74
188 189 3.243068 GCAACCACGCTTATCTTTATGGG 60.243 47.826 0.00 0.00 0.00 4.00
189 190 4.196193 CAACCACGCTTATCTTTATGGGA 58.804 43.478 0.00 0.00 0.00 4.37
190 191 4.497291 ACCACGCTTATCTTTATGGGAA 57.503 40.909 0.00 0.00 0.00 3.97
191 192 4.451900 ACCACGCTTATCTTTATGGGAAG 58.548 43.478 0.00 0.00 0.00 3.46
192 193 3.815401 CCACGCTTATCTTTATGGGAAGG 59.185 47.826 0.00 0.00 0.00 3.46
193 194 4.451900 CACGCTTATCTTTATGGGAAGGT 58.548 43.478 0.00 0.00 0.00 3.50
194 195 4.511826 CACGCTTATCTTTATGGGAAGGTC 59.488 45.833 0.00 0.00 0.00 3.85
195 196 4.065789 CGCTTATCTTTATGGGAAGGTCC 58.934 47.826 0.00 0.00 35.23 4.46
196 197 4.202367 CGCTTATCTTTATGGGAAGGTCCT 60.202 45.833 0.00 0.00 36.57 3.85
197 198 5.011738 CGCTTATCTTTATGGGAAGGTCCTA 59.988 44.000 0.00 0.00 36.57 2.94
198 199 6.463897 CGCTTATCTTTATGGGAAGGTCCTAA 60.464 42.308 0.00 0.00 36.57 2.69
199 200 6.711194 GCTTATCTTTATGGGAAGGTCCTAAC 59.289 42.308 0.00 0.00 36.57 2.34
200 201 7.420330 GCTTATCTTTATGGGAAGGTCCTAACT 60.420 40.741 0.00 0.00 36.57 2.24
201 202 5.693769 TCTTTATGGGAAGGTCCTAACTG 57.306 43.478 0.00 0.00 36.57 3.16
202 203 4.473559 TCTTTATGGGAAGGTCCTAACTGG 59.526 45.833 0.00 0.00 36.57 4.00
203 204 1.596496 ATGGGAAGGTCCTAACTGGG 58.404 55.000 0.00 0.00 36.57 4.45
204 205 0.195096 TGGGAAGGTCCTAACTGGGT 59.805 55.000 0.00 0.00 36.57 4.51
205 206 0.910338 GGGAAGGTCCTAACTGGGTC 59.090 60.000 0.00 0.00 36.57 4.46
206 207 1.555058 GGGAAGGTCCTAACTGGGTCT 60.555 57.143 0.00 0.00 36.57 3.85
207 208 2.292719 GGGAAGGTCCTAACTGGGTCTA 60.293 54.545 0.00 0.00 36.57 2.59
208 209 3.632906 GGGAAGGTCCTAACTGGGTCTAT 60.633 52.174 0.00 0.00 36.57 1.98
209 210 4.038633 GGAAGGTCCTAACTGGGTCTATT 58.961 47.826 0.00 0.00 36.20 1.73
210 211 4.141688 GGAAGGTCCTAACTGGGTCTATTG 60.142 50.000 0.00 0.00 36.20 1.90
211 212 4.076175 AGGTCCTAACTGGGTCTATTGT 57.924 45.455 0.00 0.00 36.20 2.71
212 213 4.031611 AGGTCCTAACTGGGTCTATTGTC 58.968 47.826 0.00 0.00 36.20 3.18
213 214 3.181478 GGTCCTAACTGGGTCTATTGTCG 60.181 52.174 0.00 0.00 36.20 4.35
214 215 3.446516 GTCCTAACTGGGTCTATTGTCGT 59.553 47.826 0.00 0.00 36.20 4.34
215 216 3.446161 TCCTAACTGGGTCTATTGTCGTG 59.554 47.826 0.00 0.00 36.20 4.35
216 217 2.094762 AACTGGGTCTATTGTCGTGC 57.905 50.000 0.00 0.00 0.00 5.34
217 218 0.249398 ACTGGGTCTATTGTCGTGCC 59.751 55.000 0.00 0.00 0.00 5.01
218 219 0.537188 CTGGGTCTATTGTCGTGCCT 59.463 55.000 0.00 0.00 0.00 4.75
219 220 0.535335 TGGGTCTATTGTCGTGCCTC 59.465 55.000 0.00 0.00 0.00 4.70
220 221 0.824759 GGGTCTATTGTCGTGCCTCT 59.175 55.000 0.00 0.00 0.00 3.69
221 222 1.202428 GGGTCTATTGTCGTGCCTCTC 60.202 57.143 0.00 0.00 0.00 3.20
222 223 1.534175 GGTCTATTGTCGTGCCTCTCG 60.534 57.143 0.00 0.00 0.00 4.04
223 224 0.100682 TCTATTGTCGTGCCTCTCGC 59.899 55.000 0.00 0.00 38.31 5.03
224 225 0.872021 CTATTGTCGTGCCTCTCGCC 60.872 60.000 0.00 0.00 36.24 5.54
225 226 2.607668 TATTGTCGTGCCTCTCGCCG 62.608 60.000 0.00 0.00 36.24 6.46
238 239 4.077184 CGCCGGTGCCTCCAACTA 62.077 66.667 0.00 0.00 35.57 2.24
239 240 2.125106 GCCGGTGCCTCCAACTAG 60.125 66.667 1.90 0.00 35.57 2.57
240 241 2.584608 CCGGTGCCTCCAACTAGG 59.415 66.667 0.00 0.00 39.87 3.02
241 242 2.584608 CGGTGCCTCCAACTAGGG 59.415 66.667 0.00 0.00 37.11 3.53
242 243 1.987855 CGGTGCCTCCAACTAGGGA 60.988 63.158 0.00 0.00 37.11 4.20
243 244 1.550130 CGGTGCCTCCAACTAGGGAA 61.550 60.000 0.00 0.00 38.88 3.97
244 245 0.253327 GGTGCCTCCAACTAGGGAAG 59.747 60.000 0.00 0.00 38.88 3.46
245 246 0.253327 GTGCCTCCAACTAGGGAAGG 59.747 60.000 0.00 0.00 38.88 3.46
246 247 0.178873 TGCCTCCAACTAGGGAAGGT 60.179 55.000 0.00 0.00 36.27 3.50
247 248 0.992695 GCCTCCAACTAGGGAAGGTT 59.007 55.000 0.00 0.00 36.27 3.50
248 249 2.193993 GCCTCCAACTAGGGAAGGTTA 58.806 52.381 0.00 0.00 36.27 2.85
249 250 2.778270 GCCTCCAACTAGGGAAGGTTAT 59.222 50.000 0.00 0.00 36.27 1.89
250 251 3.433740 GCCTCCAACTAGGGAAGGTTATG 60.434 52.174 0.00 0.00 36.27 1.90
251 252 3.136626 CCTCCAACTAGGGAAGGTTATGG 59.863 52.174 0.00 0.00 36.27 2.74
252 253 3.120108 TCCAACTAGGGAAGGTTATGGG 58.880 50.000 0.00 0.00 38.24 4.00
253 254 2.422945 CCAACTAGGGAAGGTTATGGGC 60.423 54.545 0.00 0.00 0.00 5.36
254 255 1.129058 ACTAGGGAAGGTTATGGGCG 58.871 55.000 0.00 0.00 0.00 6.13
255 256 0.250338 CTAGGGAAGGTTATGGGCGC 60.250 60.000 0.00 0.00 0.00 6.53
256 257 2.035237 TAGGGAAGGTTATGGGCGCG 62.035 60.000 0.00 0.00 0.00 6.86
257 258 3.583086 GGAAGGTTATGGGCGCGC 61.583 66.667 25.94 25.94 0.00 6.86
258 259 3.937062 GAAGGTTATGGGCGCGCG 61.937 66.667 28.44 28.44 0.00 6.86
270 271 4.569023 CGCGCGCTACCCTGATCA 62.569 66.667 30.48 0.00 0.00 2.92
271 272 2.659897 GCGCGCTACCCTGATCAG 60.660 66.667 26.67 16.24 0.00 2.90
282 283 1.489481 CCTGATCAGGTAGGCAGACA 58.511 55.000 30.55 0.00 43.61 3.41
283 284 2.045524 CCTGATCAGGTAGGCAGACAT 58.954 52.381 30.55 0.00 43.61 3.06
284 285 3.234353 CCTGATCAGGTAGGCAGACATA 58.766 50.000 30.55 0.00 43.61 2.29
285 286 3.643320 CCTGATCAGGTAGGCAGACATAA 59.357 47.826 30.55 0.00 43.61 1.90
286 287 4.262377 CCTGATCAGGTAGGCAGACATAAG 60.262 50.000 30.55 2.08 43.61 1.73
287 288 3.070159 TGATCAGGTAGGCAGACATAAGC 59.930 47.826 0.00 0.00 0.00 3.09
295 296 2.907910 GCAGACATAAGCCTTGTGTG 57.092 50.000 11.82 0.36 40.33 3.82
296 297 2.907910 CAGACATAAGCCTTGTGTGC 57.092 50.000 11.82 4.02 35.00 4.57
297 298 1.470098 CAGACATAAGCCTTGTGTGCC 59.530 52.381 11.82 0.00 35.00 5.01
298 299 0.811281 GACATAAGCCTTGTGTGCCC 59.189 55.000 11.82 0.00 35.00 5.36
299 300 0.960364 ACATAAGCCTTGTGTGCCCG 60.960 55.000 6.00 0.00 33.51 6.13
300 301 0.960364 CATAAGCCTTGTGTGCCCGT 60.960 55.000 0.00 0.00 0.00 5.28
301 302 0.251165 ATAAGCCTTGTGTGCCCGTT 60.251 50.000 0.00 0.00 0.00 4.44
302 303 1.169661 TAAGCCTTGTGTGCCCGTTG 61.170 55.000 0.00 0.00 0.00 4.10
303 304 3.216292 GCCTTGTGTGCCCGTTGT 61.216 61.111 0.00 0.00 0.00 3.32
304 305 2.781158 GCCTTGTGTGCCCGTTGTT 61.781 57.895 0.00 0.00 0.00 2.83
305 306 1.065600 CCTTGTGTGCCCGTTGTTG 59.934 57.895 0.00 0.00 0.00 3.33
306 307 1.662438 CCTTGTGTGCCCGTTGTTGT 61.662 55.000 0.00 0.00 0.00 3.32
307 308 0.172352 CTTGTGTGCCCGTTGTTGTT 59.828 50.000 0.00 0.00 0.00 2.83
308 309 0.109086 TTGTGTGCCCGTTGTTGTTG 60.109 50.000 0.00 0.00 0.00 3.33
309 310 1.244697 TGTGTGCCCGTTGTTGTTGT 61.245 50.000 0.00 0.00 0.00 3.32
310 311 0.109039 GTGTGCCCGTTGTTGTTGTT 60.109 50.000 0.00 0.00 0.00 2.83
311 312 0.109086 TGTGCCCGTTGTTGTTGTTG 60.109 50.000 0.00 0.00 0.00 3.33
312 313 0.109039 GTGCCCGTTGTTGTTGTTGT 60.109 50.000 0.00 0.00 0.00 3.32
313 314 0.603569 TGCCCGTTGTTGTTGTTGTT 59.396 45.000 0.00 0.00 0.00 2.83
314 315 0.995728 GCCCGTTGTTGTTGTTGTTG 59.004 50.000 0.00 0.00 0.00 3.33
315 316 1.670380 GCCCGTTGTTGTTGTTGTTGT 60.670 47.619 0.00 0.00 0.00 3.32
316 317 2.678324 CCCGTTGTTGTTGTTGTTGTT 58.322 42.857 0.00 0.00 0.00 2.83
317 318 2.410053 CCCGTTGTTGTTGTTGTTGTTG 59.590 45.455 0.00 0.00 0.00 3.33
318 319 3.053455 CCGTTGTTGTTGTTGTTGTTGT 58.947 40.909 0.00 0.00 0.00 3.32
319 320 3.491267 CCGTTGTTGTTGTTGTTGTTGTT 59.509 39.130 0.00 0.00 0.00 2.83
320 321 4.440946 CGTTGTTGTTGTTGTTGTTGTTG 58.559 39.130 0.00 0.00 0.00 3.33
321 322 4.026475 CGTTGTTGTTGTTGTTGTTGTTGT 60.026 37.500 0.00 0.00 0.00 3.32
322 323 5.500931 CGTTGTTGTTGTTGTTGTTGTTGTT 60.501 36.000 0.00 0.00 0.00 2.83
323 324 5.395325 TGTTGTTGTTGTTGTTGTTGTTG 57.605 34.783 0.00 0.00 0.00 3.33
324 325 4.870426 TGTTGTTGTTGTTGTTGTTGTTGT 59.130 33.333 0.00 0.00 0.00 3.32
325 326 5.351465 TGTTGTTGTTGTTGTTGTTGTTGTT 59.649 32.000 0.00 0.00 0.00 2.83
326 327 5.395325 TGTTGTTGTTGTTGTTGTTGTTG 57.605 34.783 0.00 0.00 0.00 3.33
327 328 4.870426 TGTTGTTGTTGTTGTTGTTGTTGT 59.130 33.333 0.00 0.00 0.00 3.32
328 329 5.351465 TGTTGTTGTTGTTGTTGTTGTTGTT 59.649 32.000 0.00 0.00 0.00 2.83
329 330 5.395325 TGTTGTTGTTGTTGTTGTTGTTG 57.605 34.783 0.00 0.00 0.00 3.33
330 331 4.870426 TGTTGTTGTTGTTGTTGTTGTTGT 59.130 33.333 0.00 0.00 0.00 3.32
331 332 5.351465 TGTTGTTGTTGTTGTTGTTGTTGTT 59.649 32.000 0.00 0.00 0.00 2.83
332 333 5.395325 TGTTGTTGTTGTTGTTGTTGTTG 57.605 34.783 0.00 0.00 0.00 3.33
333 334 4.870426 TGTTGTTGTTGTTGTTGTTGTTGT 59.130 33.333 0.00 0.00 0.00 3.32
334 335 5.351465 TGTTGTTGTTGTTGTTGTTGTTGTT 59.649 32.000 0.00 0.00 0.00 2.83
335 336 5.395325 TGTTGTTGTTGTTGTTGTTGTTG 57.605 34.783 0.00 0.00 0.00 3.33
336 337 4.870426 TGTTGTTGTTGTTGTTGTTGTTGT 59.130 33.333 0.00 0.00 0.00 3.32
337 338 5.351465 TGTTGTTGTTGTTGTTGTTGTTGTT 59.649 32.000 0.00 0.00 0.00 2.83
338 339 5.395325 TGTTGTTGTTGTTGTTGTTGTTG 57.605 34.783 0.00 0.00 0.00 3.33
339 340 4.870426 TGTTGTTGTTGTTGTTGTTGTTGT 59.130 33.333 0.00 0.00 0.00 3.32
340 341 5.351465 TGTTGTTGTTGTTGTTGTTGTTGTT 59.649 32.000 0.00 0.00 0.00 2.83
341 342 5.395325 TGTTGTTGTTGTTGTTGTTGTTG 57.605 34.783 0.00 0.00 0.00 3.33
342 343 4.870426 TGTTGTTGTTGTTGTTGTTGTTGT 59.130 33.333 0.00 0.00 0.00 3.32
343 344 5.351465 TGTTGTTGTTGTTGTTGTTGTTGTT 59.649 32.000 0.00 0.00 0.00 2.83
344 345 5.395325 TGTTGTTGTTGTTGTTGTTGTTG 57.605 34.783 0.00 0.00 0.00 3.33
345 346 4.870426 TGTTGTTGTTGTTGTTGTTGTTGT 59.130 33.333 0.00 0.00 0.00 3.32
346 347 5.351465 TGTTGTTGTTGTTGTTGTTGTTGTT 59.649 32.000 0.00 0.00 0.00 2.83
347 348 5.395325 TGTTGTTGTTGTTGTTGTTGTTG 57.605 34.783 0.00 0.00 0.00 3.33
348 349 4.870426 TGTTGTTGTTGTTGTTGTTGTTGT 59.130 33.333 0.00 0.00 0.00 3.32
349 350 5.005779 TGTTGTTGTTGTTGTTGTTGTTGTC 59.994 36.000 0.00 0.00 0.00 3.18
350 351 3.731216 TGTTGTTGTTGTTGTTGTTGTCG 59.269 39.130 0.00 0.00 0.00 4.35
351 352 3.627732 TGTTGTTGTTGTTGTTGTCGT 57.372 38.095 0.00 0.00 0.00 4.34
352 353 3.300857 TGTTGTTGTTGTTGTTGTCGTG 58.699 40.909 0.00 0.00 0.00 4.35
353 354 1.970447 TGTTGTTGTTGTTGTCGTGC 58.030 45.000 0.00 0.00 0.00 5.34
354 355 1.264672 GTTGTTGTTGTTGTCGTGCC 58.735 50.000 0.00 0.00 0.00 5.01
355 356 1.135517 GTTGTTGTTGTTGTCGTGCCT 60.136 47.619 0.00 0.00 0.00 4.75
356 357 0.730265 TGTTGTTGTTGTCGTGCCTC 59.270 50.000 0.00 0.00 0.00 4.70
357 358 1.014352 GTTGTTGTTGTCGTGCCTCT 58.986 50.000 0.00 0.00 0.00 3.69
358 359 1.400494 GTTGTTGTTGTCGTGCCTCTT 59.600 47.619 0.00 0.00 0.00 2.85
359 360 1.013596 TGTTGTTGTCGTGCCTCTTG 58.986 50.000 0.00 0.00 0.00 3.02
360 361 0.317020 GTTGTTGTCGTGCCTCTTGC 60.317 55.000 0.00 0.00 41.77 4.01
361 362 1.444119 TTGTTGTCGTGCCTCTTGCC 61.444 55.000 0.00 0.00 40.16 4.52
362 363 2.664851 TTGTCGTGCCTCTTGCCG 60.665 61.111 0.00 0.00 40.16 5.69
363 364 4.680237 TGTCGTGCCTCTTGCCGG 62.680 66.667 0.00 0.00 40.16 6.13
364 365 4.681978 GTCGTGCCTCTTGCCGGT 62.682 66.667 1.90 0.00 40.16 5.28
365 366 4.680237 TCGTGCCTCTTGCCGGTG 62.680 66.667 1.90 0.00 40.16 4.94
370 371 4.785453 CCTCTTGCCGGTGCCTCC 62.785 72.222 1.90 0.00 36.33 4.30
371 372 4.020617 CTCTTGCCGGTGCCTCCA 62.021 66.667 1.90 0.00 36.33 3.86
372 373 3.551496 CTCTTGCCGGTGCCTCCAA 62.551 63.158 1.90 0.00 36.33 3.53
373 374 3.365265 CTTGCCGGTGCCTCCAAC 61.365 66.667 1.90 0.00 36.33 3.77
378 379 3.557824 CGGTGCCTCCAACGTAAC 58.442 61.111 0.00 0.00 46.70 2.50
379 380 1.005394 CGGTGCCTCCAACGTAACT 60.005 57.895 0.00 0.00 46.70 2.24
380 381 1.289109 CGGTGCCTCCAACGTAACTG 61.289 60.000 0.00 0.00 46.70 3.16
381 382 0.953960 GGTGCCTCCAACGTAACTGG 60.954 60.000 0.00 0.00 35.97 4.00
382 383 0.953960 GTGCCTCCAACGTAACTGGG 60.954 60.000 4.96 0.00 34.46 4.45
383 384 1.373812 GCCTCCAACGTAACTGGGT 59.626 57.895 4.96 0.00 34.46 4.51
384 385 0.250597 GCCTCCAACGTAACTGGGTT 60.251 55.000 4.96 0.00 34.46 4.11
385 386 1.519408 CCTCCAACGTAACTGGGTTG 58.481 55.000 4.96 0.00 42.36 3.77
386 387 0.872388 CTCCAACGTAACTGGGTTGC 59.128 55.000 4.96 0.00 41.60 4.17
387 388 0.180642 TCCAACGTAACTGGGTTGCA 59.819 50.000 4.96 0.00 41.60 4.08
388 389 1.202830 TCCAACGTAACTGGGTTGCAT 60.203 47.619 4.96 0.00 41.60 3.96
389 390 1.199097 CCAACGTAACTGGGTTGCATC 59.801 52.381 0.00 0.00 41.60 3.91
390 391 1.136085 CAACGTAACTGGGTTGCATCG 60.136 52.381 0.00 0.00 37.34 3.84
391 392 1.296056 ACGTAACTGGGTTGCATCGC 61.296 55.000 4.94 4.94 0.00 4.58
392 393 1.019278 CGTAACTGGGTTGCATCGCT 61.019 55.000 12.44 0.00 0.00 4.93
393 394 1.737696 CGTAACTGGGTTGCATCGCTA 60.738 52.381 12.44 0.04 0.00 4.26
394 395 1.933853 GTAACTGGGTTGCATCGCTAG 59.066 52.381 12.44 10.25 0.00 3.42
395 396 0.324943 AACTGGGTTGCATCGCTAGT 59.675 50.000 12.44 10.77 0.00 2.57
396 397 0.391661 ACTGGGTTGCATCGCTAGTG 60.392 55.000 12.44 0.00 0.00 2.74
397 398 0.108186 CTGGGTTGCATCGCTAGTGA 60.108 55.000 8.75 8.75 0.00 3.41
398 399 0.391130 TGGGTTGCATCGCTAGTGAC 60.391 55.000 8.45 0.00 0.00 3.67
399 400 0.391130 GGGTTGCATCGCTAGTGACA 60.391 55.000 8.45 0.00 0.00 3.58
400 401 1.656652 GGTTGCATCGCTAGTGACAT 58.343 50.000 8.45 0.00 0.00 3.06
401 402 1.328680 GGTTGCATCGCTAGTGACATG 59.671 52.381 8.45 5.32 0.00 3.21
402 403 1.328680 GTTGCATCGCTAGTGACATGG 59.671 52.381 8.45 0.12 0.00 3.66
403 404 0.811219 TGCATCGCTAGTGACATGGC 60.811 55.000 8.45 10.60 0.00 4.40
404 405 0.811219 GCATCGCTAGTGACATGGCA 60.811 55.000 8.45 0.00 0.00 4.92
405 406 0.933097 CATCGCTAGTGACATGGCAC 59.067 55.000 24.86 24.86 39.05 5.01
406 407 0.179073 ATCGCTAGTGACATGGCACC 60.179 55.000 28.23 12.14 39.59 5.01
407 408 1.079197 CGCTAGTGACATGGCACCA 60.079 57.895 28.23 14.52 39.59 4.17
408 409 1.086067 CGCTAGTGACATGGCACCAG 61.086 60.000 28.23 24.67 39.59 4.00
409 410 0.250234 GCTAGTGACATGGCACCAGA 59.750 55.000 28.61 13.99 39.59 3.86
410 411 1.741732 GCTAGTGACATGGCACCAGAG 60.742 57.143 28.61 22.56 39.59 3.35
411 412 0.904649 TAGTGACATGGCACCAGAGG 59.095 55.000 28.23 0.00 39.59 3.69
412 413 1.130054 AGTGACATGGCACCAGAGGT 61.130 55.000 28.23 5.46 39.59 3.85
422 423 3.699894 CCAGAGGTGGCTCGCTGT 61.700 66.667 10.00 0.00 36.89 4.40
423 424 2.125753 CAGAGGTGGCTCGCTGTC 60.126 66.667 4.62 0.00 0.00 3.51
424 425 3.753434 AGAGGTGGCTCGCTGTCG 61.753 66.667 0.00 0.00 0.00 4.35
427 428 4.129737 GGTGGCTCGCTGTCGCTA 62.130 66.667 0.00 0.00 35.26 4.26
428 429 2.580867 GTGGCTCGCTGTCGCTAG 60.581 66.667 0.00 0.00 35.26 3.42
429 430 3.062466 TGGCTCGCTGTCGCTAGT 61.062 61.111 0.00 0.00 31.99 2.57
430 431 2.278271 GGCTCGCTGTCGCTAGTC 60.278 66.667 0.00 0.00 31.99 2.59
431 432 2.649349 GCTCGCTGTCGCTAGTCG 60.649 66.667 0.00 0.00 40.15 4.18
432 433 2.023461 CTCGCTGTCGCTAGTCGG 59.977 66.667 6.71 0.00 39.05 4.79
433 434 4.175489 TCGCTGTCGCTAGTCGGC 62.175 66.667 4.53 4.53 44.40 5.54
454 455 3.601685 TGTCGACACAGCGGCAGA 61.602 61.111 15.76 0.00 41.44 4.26
455 456 2.125912 GTCGACACAGCGGCAGAT 60.126 61.111 11.55 0.00 35.64 2.90
456 457 1.738099 GTCGACACAGCGGCAGATT 60.738 57.895 11.55 0.00 35.64 2.40
457 458 1.005037 TCGACACAGCGGCAGATTT 60.005 52.632 1.45 0.00 0.00 2.17
458 459 1.014044 TCGACACAGCGGCAGATTTC 61.014 55.000 1.45 0.00 0.00 2.17
459 460 1.796796 GACACAGCGGCAGATTTCC 59.203 57.895 1.45 0.00 0.00 3.13
460 461 1.648467 GACACAGCGGCAGATTTCCC 61.648 60.000 1.45 0.00 0.00 3.97
461 462 1.377725 CACAGCGGCAGATTTCCCT 60.378 57.895 1.45 0.00 0.00 4.20
462 463 0.962356 CACAGCGGCAGATTTCCCTT 60.962 55.000 1.45 0.00 0.00 3.95
463 464 0.251341 ACAGCGGCAGATTTCCCTTT 60.251 50.000 1.45 0.00 0.00 3.11
464 465 0.890683 CAGCGGCAGATTTCCCTTTT 59.109 50.000 1.45 0.00 0.00 2.27
465 466 1.273327 CAGCGGCAGATTTCCCTTTTT 59.727 47.619 1.45 0.00 0.00 1.94
508 509 9.930693 AAACAAATTTGAAAAAGGTACTGTACA 57.069 25.926 24.64 0.00 40.86 2.90
517 518 9.179909 TGAAAAAGGTACTGTACATTCTTTTCA 57.820 29.630 25.59 25.59 40.86 2.69
518 519 9.447040 GAAAAAGGTACTGTACATTCTTTTCAC 57.553 33.333 23.67 18.54 40.86 3.18
519 520 8.514330 AAAAGGTACTGTACATTCTTTTCACA 57.486 30.769 16.97 0.00 40.86 3.58
520 521 8.691661 AAAGGTACTGTACATTCTTTTCACAT 57.308 30.769 16.97 0.00 40.86 3.21
521 522 7.907214 AGGTACTGTACATTCTTTTCACATC 57.093 36.000 18.79 0.00 37.18 3.06
522 523 7.680730 AGGTACTGTACATTCTTTTCACATCT 58.319 34.615 18.79 0.00 37.18 2.90
523 524 8.812972 AGGTACTGTACATTCTTTTCACATCTA 58.187 33.333 18.79 0.00 37.18 1.98
524 525 9.431887 GGTACTGTACATTCTTTTCACATCTAA 57.568 33.333 18.79 0.00 0.00 2.10
597 598 7.696992 TTTTTAGAGGTTGTCTTGACAAGTT 57.303 32.000 15.44 7.69 36.64 2.66
598 599 7.696992 TTTTAGAGGTTGTCTTGACAAGTTT 57.303 32.000 15.44 5.48 36.64 2.66
599 600 8.795842 TTTTAGAGGTTGTCTTGACAAGTTTA 57.204 30.769 15.44 4.73 36.64 2.01
600 601 8.795842 TTTAGAGGTTGTCTTGACAAGTTTAA 57.204 30.769 15.44 9.46 36.64 1.52
601 602 8.795842 TTAGAGGTTGTCTTGACAAGTTTAAA 57.204 30.769 15.44 6.47 36.64 1.52
602 603 7.881775 AGAGGTTGTCTTGACAAGTTTAAAT 57.118 32.000 15.44 0.00 27.07 1.40
603 604 8.293699 AGAGGTTGTCTTGACAAGTTTAAATT 57.706 30.769 15.44 0.00 27.07 1.82
604 605 8.749354 AGAGGTTGTCTTGACAAGTTTAAATTT 58.251 29.630 15.44 0.00 27.07 1.82
605 606 8.702163 AGGTTGTCTTGACAAGTTTAAATTTG 57.298 30.769 18.71 18.71 0.00 2.32
606 607 8.527810 AGGTTGTCTTGACAAGTTTAAATTTGA 58.472 29.630 25.00 5.75 31.05 2.69
607 608 9.313118 GGTTGTCTTGACAAGTTTAAATTTGAT 57.687 29.630 25.00 12.39 31.05 2.57
641 642 9.857656 AATTGATATCATGGTAGCATATAAGGG 57.142 33.333 4.49 0.00 0.00 3.95
642 643 6.830912 TGATATCATGGTAGCATATAAGGGC 58.169 40.000 7.18 0.00 0.00 5.19
643 644 4.510167 ATCATGGTAGCATATAAGGGCC 57.490 45.455 7.18 0.00 0.00 5.80
644 645 2.236146 TCATGGTAGCATATAAGGGCCG 59.764 50.000 7.18 0.00 0.00 6.13
645 646 0.981183 TGGTAGCATATAAGGGCCGG 59.019 55.000 0.00 0.00 0.00 6.13
646 647 0.981943 GGTAGCATATAAGGGCCGGT 59.018 55.000 1.90 0.00 0.00 5.28
647 648 2.181975 GGTAGCATATAAGGGCCGGTA 58.818 52.381 1.90 0.00 0.00 4.02
648 649 2.770232 GGTAGCATATAAGGGCCGGTAT 59.230 50.000 1.90 2.75 0.00 2.73
649 650 3.181468 GGTAGCATATAAGGGCCGGTATC 60.181 52.174 1.90 0.00 0.00 2.24
650 651 2.546899 AGCATATAAGGGCCGGTATCA 58.453 47.619 1.90 0.00 0.00 2.15
651 652 2.501723 AGCATATAAGGGCCGGTATCAG 59.498 50.000 1.90 0.00 0.00 2.90
652 653 2.906354 CATATAAGGGCCGGTATCAGC 58.094 52.381 1.90 0.00 0.00 4.26
653 654 2.320681 TATAAGGGCCGGTATCAGCT 57.679 50.000 1.90 0.00 0.00 4.24
654 655 0.687354 ATAAGGGCCGGTATCAGCTG 59.313 55.000 7.63 7.63 0.00 4.24
655 656 0.397957 TAAGGGCCGGTATCAGCTGA 60.398 55.000 20.79 20.79 0.00 4.26
656 657 1.056700 AAGGGCCGGTATCAGCTGAT 61.057 55.000 30.85 30.85 38.51 2.90
657 658 0.178932 AGGGCCGGTATCAGCTGATA 60.179 55.000 28.69 28.69 36.05 2.15
658 659 0.905357 GGGCCGGTATCAGCTGATAT 59.095 55.000 33.20 16.48 39.03 1.63
659 660 1.279271 GGGCCGGTATCAGCTGATATT 59.721 52.381 33.20 15.76 39.03 1.28
660 661 2.290323 GGGCCGGTATCAGCTGATATTT 60.290 50.000 33.20 15.41 39.03 1.40
661 662 3.412386 GGCCGGTATCAGCTGATATTTT 58.588 45.455 33.20 15.04 39.03 1.82
662 663 3.437049 GGCCGGTATCAGCTGATATTTTC 59.563 47.826 33.20 22.02 39.03 2.29
663 664 3.437049 GCCGGTATCAGCTGATATTTTCC 59.563 47.826 33.20 27.31 39.03 3.13
671 672 2.024414 GCTGATATTTTCCCCGCTGTT 58.976 47.619 0.00 0.00 0.00 3.16
683 684 1.369091 CCGCTGTTGACACATAGGGC 61.369 60.000 0.00 0.00 30.39 5.19
719 720 8.503458 TTTTCTTCATTCAAAAATGCCAAGAA 57.497 26.923 9.29 9.29 40.42 2.52
792 797 9.061610 ACACTTTCAATATAAAATCGAAAAGCG 57.938 29.630 0.00 0.00 42.69 4.68
794 799 6.710783 TTCAATATAAAATCGAAAAGCGCG 57.289 33.333 0.00 0.00 40.61 6.86
795 800 4.668837 TCAATATAAAATCGAAAAGCGCGC 59.331 37.500 26.66 26.66 40.61 6.86
798 803 4.811761 AATCGAAAAGCGCGCGGC 62.812 61.111 33.06 23.14 44.05 6.53
823 828 1.903294 CCTCTAGCCAGCTCAGCAA 59.097 57.895 0.00 0.00 0.00 3.91
826 831 1.216444 CTAGCCAGCTCAGCAACGA 59.784 57.895 0.00 0.00 0.00 3.85
830 835 0.740868 GCCAGCTCAGCAACGACATA 60.741 55.000 0.00 0.00 0.00 2.29
860 899 4.623167 CCATGTCACGATCGAGATATTTCC 59.377 45.833 24.34 6.87 0.00 3.13
861 900 4.911514 TGTCACGATCGAGATATTTCCA 57.088 40.909 24.34 9.54 0.00 3.53
866 905 5.473504 TCACGATCGAGATATTTCCATGAGA 59.526 40.000 24.34 0.00 0.00 3.27
894 933 4.221262 TCGTTTCCCTCGGAAGATTCTAAA 59.779 41.667 0.00 0.00 43.06 1.85
895 934 4.329256 CGTTTCCCTCGGAAGATTCTAAAC 59.671 45.833 0.00 0.00 43.06 2.01
896 935 5.489249 GTTTCCCTCGGAAGATTCTAAACT 58.511 41.667 0.00 0.00 43.06 2.66
979 1023 2.203209 CTTCGGCCTACCATGCCC 60.203 66.667 0.00 0.00 46.48 5.36
1073 1125 1.105167 GCCCGGCCTATAAAACCCAC 61.105 60.000 0.00 0.00 0.00 4.61
1074 1126 0.256464 CCCGGCCTATAAAACCCACA 59.744 55.000 0.00 0.00 0.00 4.17
1114 1169 5.857394 TCAACATCAAAATCAATCGTCTCG 58.143 37.500 0.00 0.00 0.00 4.04
1125 1180 0.806868 ATCGTCTCGCACTTTCGGTA 59.193 50.000 0.00 0.00 0.00 4.02
1144 1210 1.231641 CCAAACCCAACCACCTCCA 59.768 57.895 0.00 0.00 0.00 3.86
1146 1212 1.256812 CAAACCCAACCACCTCCATC 58.743 55.000 0.00 0.00 0.00 3.51
1147 1213 0.856982 AAACCCAACCACCTCCATCA 59.143 50.000 0.00 0.00 0.00 3.07
1149 1215 0.625849 ACCCAACCACCTCCATCATC 59.374 55.000 0.00 0.00 0.00 2.92
1150 1216 0.921896 CCCAACCACCTCCATCATCT 59.078 55.000 0.00 0.00 0.00 2.90
1151 1217 1.133976 CCCAACCACCTCCATCATCTC 60.134 57.143 0.00 0.00 0.00 2.75
1152 1218 1.133976 CCAACCACCTCCATCATCTCC 60.134 57.143 0.00 0.00 0.00 3.71
1153 1219 1.133976 CAACCACCTCCATCATCTCCC 60.134 57.143 0.00 0.00 0.00 4.30
1154 1220 0.344790 ACCACCTCCATCATCTCCCT 59.655 55.000 0.00 0.00 0.00 4.20
1155 1221 0.763652 CCACCTCCATCATCTCCCTG 59.236 60.000 0.00 0.00 0.00 4.45
1156 1222 0.108207 CACCTCCATCATCTCCCTGC 59.892 60.000 0.00 0.00 0.00 4.85
1157 1223 0.326904 ACCTCCATCATCTCCCTGCA 60.327 55.000 0.00 0.00 0.00 4.41
1158 1224 0.108207 CCTCCATCATCTCCCTGCAC 59.892 60.000 0.00 0.00 0.00 4.57
1195 1261 4.320456 CTGTCCCGCAGCACCAGT 62.320 66.667 0.00 0.00 38.52 4.00
1200 1266 2.434884 CCGCAGCACCAGTACCAG 60.435 66.667 0.00 0.00 0.00 4.00
1203 1269 2.328099 GCAGCACCAGTACCAGCAC 61.328 63.158 0.00 0.00 0.00 4.40
1205 1271 2.146724 AGCACCAGTACCAGCACCA 61.147 57.895 0.00 0.00 0.00 4.17
1206 1272 1.966451 GCACCAGTACCAGCACCAC 60.966 63.158 0.00 0.00 0.00 4.16
1207 1273 1.302511 CACCAGTACCAGCACCACC 60.303 63.158 0.00 0.00 0.00 4.61
1208 1274 2.047274 CCAGTACCAGCACCACCG 60.047 66.667 0.00 0.00 0.00 4.94
1209 1275 2.047274 CAGTACCAGCACCACCGG 60.047 66.667 0.00 0.00 0.00 5.28
1210 1276 4.016706 AGTACCAGCACCACCGGC 62.017 66.667 0.00 0.00 0.00 6.13
1211 1277 4.016706 GTACCAGCACCACCGGCT 62.017 66.667 0.00 0.00 43.77 5.52
1223 1289 3.536917 CCGGCTAGCCATGGACGA 61.537 66.667 32.47 2.18 35.37 4.20
1229 1295 0.824109 CTAGCCATGGACGACAAGGA 59.176 55.000 18.40 0.00 40.39 3.36
1234 1300 1.469251 CCATGGACGACAAGGACTACG 60.469 57.143 5.56 0.00 40.39 3.51
1367 1433 2.827715 CGCAGGTCTCCTATCCCTT 58.172 57.895 0.00 0.00 29.64 3.95
1542 1608 2.758089 CCTCATGCAGCAAGCCGTC 61.758 63.158 0.00 0.00 44.83 4.79
1904 1982 5.104941 TCCAACCTTCATCACGATGATACTT 60.105 40.000 10.41 0.41 46.12 2.24
1942 2023 2.353579 ACACCGACCGTTTTCTTCTTTG 59.646 45.455 0.00 0.00 0.00 2.77
1945 2026 3.064408 ACCGACCGTTTTCTTCTTTGTTC 59.936 43.478 0.00 0.00 0.00 3.18
1956 2037 5.359194 TCTTCTTTGTTCCAGTCAAGACT 57.641 39.130 0.00 0.00 43.61 3.24
1971 2052 4.760047 ACTGCGCCGTCCATGTCC 62.760 66.667 4.18 0.00 0.00 4.02
2366 2447 2.048597 CTACGACAAGGCCGTGCA 60.049 61.111 19.37 0.74 40.76 4.57
2472 2559 3.737172 GCTGATTGCCGCCGTGTT 61.737 61.111 0.00 0.00 35.15 3.32
2475 2562 3.053291 GATTGCCGCCGTGTTCCA 61.053 61.111 0.00 0.00 0.00 3.53
2476 2563 2.361104 ATTGCCGCCGTGTTCCAT 60.361 55.556 0.00 0.00 0.00 3.41
2477 2564 2.597117 GATTGCCGCCGTGTTCCATG 62.597 60.000 0.00 0.00 0.00 3.66
2478 2565 4.634703 TGCCGCCGTGTTCCATGT 62.635 61.111 0.00 0.00 0.00 3.21
2479 2566 3.361977 GCCGCCGTGTTCCATGTT 61.362 61.111 0.00 0.00 0.00 2.71
2480 2567 2.867472 CCGCCGTGTTCCATGTTC 59.133 61.111 0.00 0.00 0.00 3.18
2481 2568 2.474266 CGCCGTGTTCCATGTTCG 59.526 61.111 0.00 0.00 0.00 3.95
2482 2569 2.314647 CGCCGTGTTCCATGTTCGT 61.315 57.895 0.00 0.00 0.00 3.85
2514 2601 2.385757 TTCATTGCCGTGTGTGTGCG 62.386 55.000 0.00 0.00 0.00 5.34
2515 2602 4.326766 ATTGCCGTGTGTGTGCGC 62.327 61.111 0.00 0.00 0.00 6.09
2552 2639 4.180057 GGATCTGTTTAGTGAGTGCTCTG 58.820 47.826 0.00 0.00 0.00 3.35
2582 2669 4.215399 AGTGGATTTTCGTGTGGTTATGTG 59.785 41.667 0.00 0.00 0.00 3.21
2704 2865 5.241662 TGACACGTGTGATTGATAATCCAA 58.758 37.500 28.82 0.00 37.09 3.53
2708 2869 6.206634 ACACGTGTGATTGATAATCCAAAGTT 59.793 34.615 22.71 0.00 37.09 2.66
2723 2884 3.119137 CCAAAGTTACTTATGGCTTGCCC 60.119 47.826 9.35 0.00 0.00 5.36
2724 2885 3.739401 AAGTTACTTATGGCTTGCCCT 57.261 42.857 9.35 1.69 0.00 5.19
2725 2886 4.855298 AAGTTACTTATGGCTTGCCCTA 57.145 40.909 9.35 0.63 0.00 3.53
2726 2887 4.423625 AGTTACTTATGGCTTGCCCTAG 57.576 45.455 9.35 6.25 0.00 3.02
2727 2888 2.879026 GTTACTTATGGCTTGCCCTAGC 59.121 50.000 9.35 0.00 40.48 3.42
2733 2894 2.751837 GCTTGCCCTAGCCACCAC 60.752 66.667 0.00 0.00 38.69 4.16
2734 2895 2.044946 CTTGCCCTAGCCACCACC 60.045 66.667 0.00 0.00 38.69 4.61
2735 2896 3.645268 CTTGCCCTAGCCACCACCC 62.645 68.421 0.00 0.00 38.69 4.61
2756 2917 4.393778 GTCTCCCCCTCCCGGTGA 62.394 72.222 0.00 0.00 0.00 4.02
2757 2918 4.393778 TCTCCCCCTCCCGGTGAC 62.394 72.222 0.00 0.00 0.00 3.67
2782 2943 4.083862 GCGGCCTCGGGAAGTCTT 62.084 66.667 0.00 0.00 36.79 3.01
2783 2944 2.125512 CGGCCTCGGGAAGTCTTG 60.126 66.667 0.00 0.00 0.00 3.02
2784 2945 2.269241 GGCCTCGGGAAGTCTTGG 59.731 66.667 0.00 0.00 0.00 3.61
2785 2946 2.291043 GGCCTCGGGAAGTCTTGGA 61.291 63.158 0.00 0.00 0.00 3.53
2786 2947 1.219393 GCCTCGGGAAGTCTTGGAG 59.781 63.158 0.00 0.00 0.00 3.86
2787 2948 1.901085 CCTCGGGAAGTCTTGGAGG 59.099 63.158 8.70 8.70 38.43 4.30
2788 2949 0.905337 CCTCGGGAAGTCTTGGAGGT 60.905 60.000 12.66 0.00 39.51 3.85
2789 2950 0.533032 CTCGGGAAGTCTTGGAGGTC 59.467 60.000 0.00 0.00 0.00 3.85
2790 2951 0.114560 TCGGGAAGTCTTGGAGGTCT 59.885 55.000 0.00 0.00 0.00 3.85
2791 2952 0.247736 CGGGAAGTCTTGGAGGTCTG 59.752 60.000 0.00 0.00 0.00 3.51
2792 2953 1.353091 GGGAAGTCTTGGAGGTCTGT 58.647 55.000 0.00 0.00 0.00 3.41
2793 2954 1.700186 GGGAAGTCTTGGAGGTCTGTT 59.300 52.381 0.00 0.00 0.00 3.16
2855 3021 6.364706 GTCGGTAGCAATCTCTATTCATTGAG 59.635 42.308 0.00 0.00 32.56 3.02
2874 3040 1.612950 AGCTGTCTATGCATCCGAGAG 59.387 52.381 0.19 10.40 0.00 3.20
2875 3041 1.611006 GCTGTCTATGCATCCGAGAGA 59.389 52.381 20.47 9.08 0.00 3.10
2887 3053 4.609947 CATCCGAGAGAGAGAGAAACATG 58.390 47.826 0.00 0.00 0.00 3.21
2900 3066 2.507471 AGAAACATGGAGAGATGGGGAC 59.493 50.000 0.00 0.00 0.00 4.46
2960 3128 3.716195 CGGACATGGTGGAGGGCA 61.716 66.667 0.00 0.00 0.00 5.36
2962 3130 1.307647 GGACATGGTGGAGGGCAAT 59.692 57.895 0.00 0.00 0.00 3.56
2983 3151 1.847506 TGATGGCAGGGTGTGGTCT 60.848 57.895 0.00 0.00 0.00 3.85
2984 3152 1.377725 GATGGCAGGGTGTGGTCTG 60.378 63.158 0.00 0.00 0.00 3.51
2985 3153 1.841302 GATGGCAGGGTGTGGTCTGA 61.841 60.000 0.00 0.00 33.11 3.27
2986 3154 1.845627 ATGGCAGGGTGTGGTCTGAG 61.846 60.000 0.00 0.00 33.11 3.35
2987 3155 2.348998 GCAGGGTGTGGTCTGAGG 59.651 66.667 0.00 0.00 33.11 3.86
2988 3156 2.348998 CAGGGTGTGGTCTGAGGC 59.651 66.667 0.00 0.00 33.11 4.70
3020 3194 1.777941 GGACCTTCCCGTCACTATCT 58.222 55.000 0.00 0.00 34.24 1.98
3021 3195 2.747467 CGGACCTTCCCGTCACTATCTA 60.747 54.545 0.00 0.00 44.23 1.98
3051 3241 3.315949 GGTGGGGTGTACGGCTCA 61.316 66.667 0.00 0.00 0.00 4.26
3095 3286 1.148498 CGGCCCCACCTCTTTATCC 59.852 63.158 0.00 0.00 35.61 2.59
3140 3336 1.683943 CATAGTGGGTTGGATGCCTG 58.316 55.000 0.00 0.00 0.00 4.85
3144 3340 3.134127 GGGTTGGATGCCTGCGAC 61.134 66.667 0.00 0.00 0.00 5.19
3172 3369 1.276859 GGATTAAGGGTCCGGTGGGT 61.277 60.000 0.00 0.00 33.83 4.51
3184 3381 2.351276 GTGGGTCGTTGGGCTCAT 59.649 61.111 0.00 0.00 0.00 2.90
3209 3408 4.384208 CGGGAGGAGATCAACCTAACATTT 60.384 45.833 10.71 0.00 37.93 2.32
3211 3410 5.952347 GGGAGGAGATCAACCTAACATTTTT 59.048 40.000 10.71 0.00 37.93 1.94
3311 3512 6.456853 GCATGTTTTATCGTCACAGCTCAATA 60.457 38.462 0.00 0.00 0.00 1.90
3331 3532 3.460857 AGCCGATAGAATCAGACAACC 57.539 47.619 0.00 0.00 39.76 3.77
3391 3593 6.377080 TCTTTTAGGCCTCTCATGATCTAGA 58.623 40.000 9.68 0.00 0.00 2.43
3400 3602 6.757947 GCCTCTCATGATCTAGAAATCATAGC 59.242 42.308 8.23 4.50 43.01 2.97
3406 3608 8.878211 TCATGATCTAGAAATCATAGCCTTTCT 58.122 33.333 8.23 3.37 43.01 2.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.536766 ACACGCAAGAACATGGTGATG 59.463 47.619 0.00 0.00 43.62 3.07
1 2 1.536766 CACACGCAAGAACATGGTGAT 59.463 47.619 0.00 0.00 43.62 3.06
2 3 0.943673 CACACGCAAGAACATGGTGA 59.056 50.000 0.00 0.00 43.62 4.02
3 4 0.661187 GCACACGCAAGAACATGGTG 60.661 55.000 0.00 0.00 43.62 4.17
4 5 1.654220 GCACACGCAAGAACATGGT 59.346 52.632 0.00 0.00 43.62 3.55
5 6 1.440850 CGCACACGCAAGAACATGG 60.441 57.895 0.00 0.00 43.62 3.66
6 7 0.510790 TACGCACACGCAAGAACATG 59.489 50.000 0.00 0.00 45.53 3.21
7 8 0.790207 CTACGCACACGCAAGAACAT 59.210 50.000 0.00 0.00 45.53 2.71
8 9 1.218875 CCTACGCACACGCAAGAACA 61.219 55.000 0.00 0.00 45.53 3.18
9 10 0.942410 TCCTACGCACACGCAAGAAC 60.942 55.000 0.00 0.00 45.53 3.01
10 11 0.249531 TTCCTACGCACACGCAAGAA 60.250 50.000 0.00 0.00 45.53 2.52
11 12 0.037697 ATTCCTACGCACACGCAAGA 60.038 50.000 0.00 0.00 45.53 3.02
12 13 0.796312 AATTCCTACGCACACGCAAG 59.204 50.000 0.00 0.00 45.53 4.01
13 14 1.231221 AAATTCCTACGCACACGCAA 58.769 45.000 0.00 0.00 45.53 4.85
14 15 1.231221 AAAATTCCTACGCACACGCA 58.769 45.000 0.00 0.00 45.53 5.24
15 16 2.325509 AAAAATTCCTACGCACACGC 57.674 45.000 0.00 0.00 45.53 5.34
32 33 6.956202 TGGGGAACGTAGTAATTTCAAAAA 57.044 33.333 0.00 0.00 45.00 1.94
33 34 6.320672 TGTTGGGGAACGTAGTAATTTCAAAA 59.679 34.615 0.00 0.00 45.00 2.44
34 35 5.826737 TGTTGGGGAACGTAGTAATTTCAAA 59.173 36.000 0.00 0.00 45.00 2.69
35 36 5.374921 TGTTGGGGAACGTAGTAATTTCAA 58.625 37.500 0.00 0.00 45.00 2.69
36 37 4.970711 TGTTGGGGAACGTAGTAATTTCA 58.029 39.130 0.00 0.00 45.00 2.69
37 38 4.999311 ACTGTTGGGGAACGTAGTAATTTC 59.001 41.667 0.00 0.00 45.00 2.17
38 39 4.976864 ACTGTTGGGGAACGTAGTAATTT 58.023 39.130 0.00 0.00 45.00 1.82
39 40 4.628963 ACTGTTGGGGAACGTAGTAATT 57.371 40.909 0.00 0.00 45.00 1.40
40 41 4.628963 AACTGTTGGGGAACGTAGTAAT 57.371 40.909 0.00 0.00 45.00 1.89
41 42 5.743636 ATAACTGTTGGGGAACGTAGTAA 57.256 39.130 2.69 0.00 45.00 2.24
42 43 5.743636 AATAACTGTTGGGGAACGTAGTA 57.256 39.130 2.69 0.00 45.00 1.82
44 45 5.952526 AAAATAACTGTTGGGGAACGTAG 57.047 39.130 2.69 0.00 0.00 3.51
45 46 7.166851 TGATAAAATAACTGTTGGGGAACGTA 58.833 34.615 2.69 0.00 0.00 3.57
46 47 6.005198 TGATAAAATAACTGTTGGGGAACGT 58.995 36.000 2.69 0.00 0.00 3.99
47 48 6.503589 TGATAAAATAACTGTTGGGGAACG 57.496 37.500 2.69 0.00 0.00 3.95
48 49 7.123547 TCCATGATAAAATAACTGTTGGGGAAC 59.876 37.037 2.69 0.00 0.00 3.62
49 50 7.185565 TCCATGATAAAATAACTGTTGGGGAA 58.814 34.615 2.69 0.00 0.00 3.97
50 51 6.736581 TCCATGATAAAATAACTGTTGGGGA 58.263 36.000 2.69 0.00 0.00 4.81
51 52 7.287466 TGATCCATGATAAAATAACTGTTGGGG 59.713 37.037 2.69 0.00 0.00 4.96
52 53 8.236585 TGATCCATGATAAAATAACTGTTGGG 57.763 34.615 2.69 0.00 0.00 4.12
53 54 7.864379 GCTGATCCATGATAAAATAACTGTTGG 59.136 37.037 2.69 0.00 0.00 3.77
54 55 8.407832 TGCTGATCCATGATAAAATAACTGTTG 58.592 33.333 2.69 0.00 0.00 3.33
55 56 8.523915 TGCTGATCCATGATAAAATAACTGTT 57.476 30.769 0.00 0.00 0.00 3.16
56 57 8.701908 ATGCTGATCCATGATAAAATAACTGT 57.298 30.769 0.00 0.00 0.00 3.55
84 85 8.833231 TTTAATCCGGTTAAATTTGAATGCAA 57.167 26.923 14.20 0.00 37.35 4.08
95 96 9.465985 GTTCAAGTTCAATTTAATCCGGTTAAA 57.534 29.630 18.12 18.12 44.10 1.52
96 97 8.630917 TGTTCAAGTTCAATTTAATCCGGTTAA 58.369 29.630 0.00 3.17 0.00 2.01
97 98 8.167605 TGTTCAAGTTCAATTTAATCCGGTTA 57.832 30.769 0.00 0.00 0.00 2.85
98 99 7.045126 TGTTCAAGTTCAATTTAATCCGGTT 57.955 32.000 0.00 0.00 0.00 4.44
99 100 6.642707 TGTTCAAGTTCAATTTAATCCGGT 57.357 33.333 0.00 0.00 0.00 5.28
100 101 7.114811 CAGTTGTTCAAGTTCAATTTAATCCGG 59.885 37.037 0.00 0.00 0.00 5.14
101 102 7.358352 GCAGTTGTTCAAGTTCAATTTAATCCG 60.358 37.037 0.00 0.00 0.00 4.18
102 103 7.653311 AGCAGTTGTTCAAGTTCAATTTAATCC 59.347 33.333 0.00 0.00 0.00 3.01
103 104 8.482429 CAGCAGTTGTTCAAGTTCAATTTAATC 58.518 33.333 0.00 0.00 0.00 1.75
104 105 7.439056 CCAGCAGTTGTTCAAGTTCAATTTAAT 59.561 33.333 0.00 0.00 0.00 1.40
105 106 6.756074 CCAGCAGTTGTTCAAGTTCAATTTAA 59.244 34.615 0.00 0.00 0.00 1.52
106 107 6.272318 CCAGCAGTTGTTCAAGTTCAATTTA 58.728 36.000 0.00 0.00 0.00 1.40
107 108 5.111293 CCAGCAGTTGTTCAAGTTCAATTT 58.889 37.500 0.00 0.00 0.00 1.82
108 109 4.685924 CCAGCAGTTGTTCAAGTTCAATT 58.314 39.130 0.00 0.00 0.00 2.32
109 110 3.491447 GCCAGCAGTTGTTCAAGTTCAAT 60.491 43.478 0.00 0.00 0.00 2.57
110 111 2.159254 GCCAGCAGTTGTTCAAGTTCAA 60.159 45.455 0.00 0.00 0.00 2.69
111 112 1.405105 GCCAGCAGTTGTTCAAGTTCA 59.595 47.619 0.00 0.00 0.00 3.18
112 113 1.678101 AGCCAGCAGTTGTTCAAGTTC 59.322 47.619 0.00 0.00 0.00 3.01
113 114 1.406539 CAGCCAGCAGTTGTTCAAGTT 59.593 47.619 0.00 0.00 0.00 2.66
114 115 1.027357 CAGCCAGCAGTTGTTCAAGT 58.973 50.000 0.00 0.00 0.00 3.16
115 116 1.266175 CTCAGCCAGCAGTTGTTCAAG 59.734 52.381 0.00 0.00 0.00 3.02
116 117 1.311859 CTCAGCCAGCAGTTGTTCAA 58.688 50.000 0.00 0.00 0.00 2.69
117 118 0.181114 ACTCAGCCAGCAGTTGTTCA 59.819 50.000 0.00 0.00 0.00 3.18
118 119 0.871057 GACTCAGCCAGCAGTTGTTC 59.129 55.000 0.00 0.00 0.00 3.18
119 120 0.181114 TGACTCAGCCAGCAGTTGTT 59.819 50.000 0.00 0.00 0.00 2.83
120 121 0.399454 ATGACTCAGCCAGCAGTTGT 59.601 50.000 0.00 0.00 0.00 3.32
121 122 0.803117 CATGACTCAGCCAGCAGTTG 59.197 55.000 0.00 0.00 0.00 3.16
122 123 0.322277 CCATGACTCAGCCAGCAGTT 60.322 55.000 0.00 0.00 0.00 3.16
123 124 1.298993 CCATGACTCAGCCAGCAGT 59.701 57.895 0.00 0.00 0.00 4.40
124 125 1.025113 CACCATGACTCAGCCAGCAG 61.025 60.000 0.00 0.00 0.00 4.24
125 126 1.002990 CACCATGACTCAGCCAGCA 60.003 57.895 0.00 0.00 0.00 4.41
126 127 2.404995 GCACCATGACTCAGCCAGC 61.405 63.158 0.00 0.00 0.00 4.85
127 128 1.748122 GGCACCATGACTCAGCCAG 60.748 63.158 0.00 0.00 44.59 4.85
128 129 2.352422 GGCACCATGACTCAGCCA 59.648 61.111 0.00 0.00 44.59 4.75
129 130 2.042831 GTGGCACCATGACTCAGCC 61.043 63.158 6.29 0.00 45.41 4.85
130 131 2.042831 GGTGGCACCATGACTCAGC 61.043 63.158 31.26 0.00 38.42 4.26
131 132 1.376086 TGGTGGCACCATGACTCAG 59.624 57.895 34.67 0.00 44.79 3.35
132 133 3.573673 TGGTGGCACCATGACTCA 58.426 55.556 34.67 11.13 44.79 3.41
140 141 1.134521 TCAGTTCGATATGGTGGCACC 60.135 52.381 29.75 29.75 39.22 5.01
141 142 1.933853 GTCAGTTCGATATGGTGGCAC 59.066 52.381 9.70 9.70 0.00 5.01
142 143 1.134521 GGTCAGTTCGATATGGTGGCA 60.135 52.381 0.00 0.00 0.00 4.92
143 144 1.134521 TGGTCAGTTCGATATGGTGGC 60.135 52.381 0.00 0.00 0.00 5.01
144 145 2.168521 ACTGGTCAGTTCGATATGGTGG 59.831 50.000 0.00 0.00 38.83 4.61
145 146 3.190079 CACTGGTCAGTTCGATATGGTG 58.810 50.000 0.20 0.00 40.20 4.17
146 147 2.418746 GCACTGGTCAGTTCGATATGGT 60.419 50.000 0.20 0.00 40.20 3.55
147 148 2.205074 GCACTGGTCAGTTCGATATGG 58.795 52.381 0.20 0.00 40.20 2.74
148 149 2.892374 TGCACTGGTCAGTTCGATATG 58.108 47.619 0.20 0.00 40.20 1.78
149 150 3.262420 GTTGCACTGGTCAGTTCGATAT 58.738 45.455 0.20 0.00 40.20 1.63
150 151 2.611971 GGTTGCACTGGTCAGTTCGATA 60.612 50.000 0.20 0.00 40.20 2.92
151 152 1.512926 GTTGCACTGGTCAGTTCGAT 58.487 50.000 0.20 0.00 40.20 3.59
152 153 0.531974 GGTTGCACTGGTCAGTTCGA 60.532 55.000 0.20 0.00 40.20 3.71
153 154 0.813610 TGGTTGCACTGGTCAGTTCG 60.814 55.000 0.20 0.00 40.20 3.95
154 155 0.663153 GTGGTTGCACTGGTCAGTTC 59.337 55.000 0.20 0.00 40.20 3.01
155 156 1.095228 CGTGGTTGCACTGGTCAGTT 61.095 55.000 0.20 0.00 40.20 3.16
156 157 1.523711 CGTGGTTGCACTGGTCAGT 60.524 57.895 0.00 0.00 43.61 3.41
157 158 2.896801 GCGTGGTTGCACTGGTCAG 61.897 63.158 0.00 0.00 34.15 3.51
158 159 2.884997 AAGCGTGGTTGCACTGGTCA 62.885 55.000 0.00 0.00 37.31 4.02
159 160 0.882927 TAAGCGTGGTTGCACTGGTC 60.883 55.000 0.00 0.00 37.31 4.02
160 161 0.250727 ATAAGCGTGGTTGCACTGGT 60.251 50.000 0.00 0.00 37.31 4.00
161 162 0.447801 GATAAGCGTGGTTGCACTGG 59.552 55.000 0.00 0.00 37.31 4.00
162 163 1.442769 AGATAAGCGTGGTTGCACTG 58.557 50.000 0.00 0.00 37.31 3.66
163 164 2.185004 AAGATAAGCGTGGTTGCACT 57.815 45.000 0.00 0.00 37.31 4.40
164 165 2.989422 AAAGATAAGCGTGGTTGCAC 57.011 45.000 0.00 0.00 37.31 4.57
165 166 3.376859 CCATAAAGATAAGCGTGGTTGCA 59.623 43.478 0.00 0.00 37.31 4.08
166 167 3.243068 CCCATAAAGATAAGCGTGGTTGC 60.243 47.826 0.00 0.00 0.00 4.17
167 168 4.196193 TCCCATAAAGATAAGCGTGGTTG 58.804 43.478 0.00 0.00 0.00 3.77
168 169 4.497291 TCCCATAAAGATAAGCGTGGTT 57.503 40.909 0.00 0.00 0.00 3.67
169 170 4.451900 CTTCCCATAAAGATAAGCGTGGT 58.548 43.478 0.00 0.00 0.00 4.16
170 171 3.815401 CCTTCCCATAAAGATAAGCGTGG 59.185 47.826 0.00 0.00 0.00 4.94
171 172 4.451900 ACCTTCCCATAAAGATAAGCGTG 58.548 43.478 0.00 0.00 0.00 5.34
172 173 4.444449 GGACCTTCCCATAAAGATAAGCGT 60.444 45.833 0.00 0.00 0.00 5.07
173 174 4.065789 GGACCTTCCCATAAAGATAAGCG 58.934 47.826 0.00 0.00 0.00 4.68
174 175 5.311844 AGGACCTTCCCATAAAGATAAGC 57.688 43.478 0.00 0.00 37.19 3.09
175 176 7.934120 CAGTTAGGACCTTCCCATAAAGATAAG 59.066 40.741 0.00 0.00 37.19 1.73
176 177 7.147373 CCAGTTAGGACCTTCCCATAAAGATAA 60.147 40.741 0.00 0.00 41.22 1.75
177 178 6.329197 CCAGTTAGGACCTTCCCATAAAGATA 59.671 42.308 0.00 0.00 41.22 1.98
178 179 5.132816 CCAGTTAGGACCTTCCCATAAAGAT 59.867 44.000 0.00 0.00 41.22 2.40
179 180 4.473559 CCAGTTAGGACCTTCCCATAAAGA 59.526 45.833 0.00 0.00 41.22 2.52
180 181 4.385310 CCCAGTTAGGACCTTCCCATAAAG 60.385 50.000 0.00 0.00 41.22 1.85
181 182 3.526019 CCCAGTTAGGACCTTCCCATAAA 59.474 47.826 0.00 0.00 41.22 1.40
182 183 3.120108 CCCAGTTAGGACCTTCCCATAA 58.880 50.000 0.00 0.00 41.22 1.90
183 184 2.046729 ACCCAGTTAGGACCTTCCCATA 59.953 50.000 0.00 0.00 41.22 2.74
184 185 1.203570 ACCCAGTTAGGACCTTCCCAT 60.204 52.381 0.00 0.00 41.22 4.00
185 186 0.195096 ACCCAGTTAGGACCTTCCCA 59.805 55.000 0.00 0.00 41.22 4.37
186 187 0.910338 GACCCAGTTAGGACCTTCCC 59.090 60.000 0.00 0.00 41.22 3.97
187 188 1.954035 AGACCCAGTTAGGACCTTCC 58.046 55.000 0.00 0.00 41.22 3.46
188 189 4.470304 ACAATAGACCCAGTTAGGACCTTC 59.530 45.833 0.00 0.00 41.22 3.46
189 190 4.436079 ACAATAGACCCAGTTAGGACCTT 58.564 43.478 0.00 0.00 41.22 3.50
190 191 4.031611 GACAATAGACCCAGTTAGGACCT 58.968 47.826 0.00 0.00 41.22 3.85
191 192 3.181478 CGACAATAGACCCAGTTAGGACC 60.181 52.174 0.00 0.00 41.22 4.46
192 193 3.446516 ACGACAATAGACCCAGTTAGGAC 59.553 47.826 0.00 0.00 41.22 3.85
193 194 3.446161 CACGACAATAGACCCAGTTAGGA 59.554 47.826 0.00 0.00 41.22 2.94
194 195 3.782046 CACGACAATAGACCCAGTTAGG 58.218 50.000 0.00 0.00 37.03 2.69
195 196 3.187700 GCACGACAATAGACCCAGTTAG 58.812 50.000 0.00 0.00 0.00 2.34
196 197 2.093869 GGCACGACAATAGACCCAGTTA 60.094 50.000 0.00 0.00 0.00 2.24
197 198 1.338769 GGCACGACAATAGACCCAGTT 60.339 52.381 0.00 0.00 0.00 3.16
198 199 0.249398 GGCACGACAATAGACCCAGT 59.751 55.000 0.00 0.00 0.00 4.00
199 200 0.537188 AGGCACGACAATAGACCCAG 59.463 55.000 0.00 0.00 0.00 4.45
200 201 0.535335 GAGGCACGACAATAGACCCA 59.465 55.000 0.00 0.00 0.00 4.51
201 202 0.824759 AGAGGCACGACAATAGACCC 59.175 55.000 0.00 0.00 0.00 4.46
202 203 1.534175 CGAGAGGCACGACAATAGACC 60.534 57.143 0.00 0.00 0.00 3.85
203 204 1.828832 CGAGAGGCACGACAATAGAC 58.171 55.000 0.00 0.00 0.00 2.59
204 205 0.100682 GCGAGAGGCACGACAATAGA 59.899 55.000 0.00 0.00 42.87 1.98
205 206 2.582959 GCGAGAGGCACGACAATAG 58.417 57.895 0.00 0.00 42.87 1.73
206 207 4.806571 GCGAGAGGCACGACAATA 57.193 55.556 0.00 0.00 42.87 1.90
221 222 4.077184 TAGTTGGAGGCACCGGCG 62.077 66.667 0.00 0.00 42.47 6.46
222 223 2.125106 CTAGTTGGAGGCACCGGC 60.125 66.667 0.00 0.00 42.61 6.13
223 224 2.584608 CCTAGTTGGAGGCACCGG 59.415 66.667 0.00 0.00 42.61 5.28
224 225 1.550130 TTCCCTAGTTGGAGGCACCG 61.550 60.000 0.00 0.00 42.61 4.94
225 226 0.253327 CTTCCCTAGTTGGAGGCACC 59.747 60.000 0.00 0.00 38.35 5.01
226 227 0.253327 CCTTCCCTAGTTGGAGGCAC 59.747 60.000 0.00 0.00 38.35 5.01
227 228 0.178873 ACCTTCCCTAGTTGGAGGCA 60.179 55.000 4.14 0.00 38.35 4.75
228 229 0.992695 AACCTTCCCTAGTTGGAGGC 59.007 55.000 4.14 0.00 38.35 4.70
229 230 3.136626 CCATAACCTTCCCTAGTTGGAGG 59.863 52.174 2.88 2.88 38.35 4.30
230 231 3.136626 CCCATAACCTTCCCTAGTTGGAG 59.863 52.174 0.00 0.00 38.35 3.86
231 232 3.120108 CCCATAACCTTCCCTAGTTGGA 58.880 50.000 0.00 0.00 38.35 3.53
232 233 2.422945 GCCCATAACCTTCCCTAGTTGG 60.423 54.545 0.00 0.00 0.00 3.77
233 234 2.745152 CGCCCATAACCTTCCCTAGTTG 60.745 54.545 0.00 0.00 0.00 3.16
234 235 1.489230 CGCCCATAACCTTCCCTAGTT 59.511 52.381 0.00 0.00 0.00 2.24
235 236 1.129058 CGCCCATAACCTTCCCTAGT 58.871 55.000 0.00 0.00 0.00 2.57
236 237 0.250338 GCGCCCATAACCTTCCCTAG 60.250 60.000 0.00 0.00 0.00 3.02
237 238 1.834301 GCGCCCATAACCTTCCCTA 59.166 57.895 0.00 0.00 0.00 3.53
238 239 2.595655 GCGCCCATAACCTTCCCT 59.404 61.111 0.00 0.00 0.00 4.20
239 240 2.900337 CGCGCCCATAACCTTCCC 60.900 66.667 0.00 0.00 0.00 3.97
240 241 3.583086 GCGCGCCCATAACCTTCC 61.583 66.667 23.24 0.00 0.00 3.46
241 242 3.937062 CGCGCGCCCATAACCTTC 61.937 66.667 27.72 0.00 0.00 3.46
245 246 3.996888 GTAGCGCGCGCCCATAAC 61.997 66.667 46.98 32.03 43.17 1.89
253 254 4.569023 TGATCAGGGTAGCGCGCG 62.569 66.667 28.44 28.44 34.93 6.86
254 255 2.659897 CTGATCAGGGTAGCGCGC 60.660 66.667 26.66 26.66 0.00 6.86
255 256 2.028190 CCTGATCAGGGTAGCGCG 59.972 66.667 31.14 0.00 44.87 6.86
264 265 4.798924 GCTTATGTCTGCCTACCTGATCAG 60.799 50.000 16.24 16.24 0.00 2.90
265 266 3.070159 GCTTATGTCTGCCTACCTGATCA 59.930 47.826 0.00 0.00 0.00 2.92
266 267 3.556004 GGCTTATGTCTGCCTACCTGATC 60.556 52.174 0.00 0.00 45.26 2.92
267 268 2.370189 GGCTTATGTCTGCCTACCTGAT 59.630 50.000 0.00 0.00 45.26 2.90
268 269 1.762957 GGCTTATGTCTGCCTACCTGA 59.237 52.381 0.00 0.00 45.26 3.86
269 270 2.246719 GGCTTATGTCTGCCTACCTG 57.753 55.000 0.00 0.00 45.26 4.00
276 277 1.135575 GCACACAAGGCTTATGTCTGC 60.136 52.381 8.46 6.77 35.96 4.26
277 278 1.470098 GGCACACAAGGCTTATGTCTG 59.530 52.381 8.46 0.00 0.00 3.51
278 279 1.614317 GGGCACACAAGGCTTATGTCT 60.614 52.381 8.46 0.00 0.00 3.41
279 280 0.811281 GGGCACACAAGGCTTATGTC 59.189 55.000 8.46 4.83 0.00 3.06
280 281 0.960364 CGGGCACACAAGGCTTATGT 60.960 55.000 5.10 5.10 0.00 2.29
281 282 0.960364 ACGGGCACACAAGGCTTATG 60.960 55.000 3.50 3.50 0.00 1.90
282 283 0.251165 AACGGGCACACAAGGCTTAT 60.251 50.000 0.00 0.00 0.00 1.73
283 284 1.149627 AACGGGCACACAAGGCTTA 59.850 52.632 0.00 0.00 0.00 3.09
284 285 2.123897 AACGGGCACACAAGGCTT 60.124 55.556 0.00 0.00 0.00 4.35
285 286 2.906897 CAACGGGCACACAAGGCT 60.907 61.111 0.00 0.00 0.00 4.58
286 287 2.781158 AACAACGGGCACACAAGGC 61.781 57.895 0.00 0.00 0.00 4.35
287 288 1.065600 CAACAACGGGCACACAAGG 59.934 57.895 0.00 0.00 0.00 3.61
288 289 0.172352 AACAACAACGGGCACACAAG 59.828 50.000 0.00 0.00 0.00 3.16
289 290 0.109086 CAACAACAACGGGCACACAA 60.109 50.000 0.00 0.00 0.00 3.33
290 291 1.244697 ACAACAACAACGGGCACACA 61.245 50.000 0.00 0.00 0.00 3.72
291 292 0.109039 AACAACAACAACGGGCACAC 60.109 50.000 0.00 0.00 0.00 3.82
292 293 0.109086 CAACAACAACAACGGGCACA 60.109 50.000 0.00 0.00 0.00 4.57
293 294 0.109039 ACAACAACAACAACGGGCAC 60.109 50.000 0.00 0.00 0.00 5.01
294 295 0.603569 AACAACAACAACAACGGGCA 59.396 45.000 0.00 0.00 0.00 5.36
295 296 0.995728 CAACAACAACAACAACGGGC 59.004 50.000 0.00 0.00 0.00 6.13
296 297 2.355717 ACAACAACAACAACAACGGG 57.644 45.000 0.00 0.00 0.00 5.28
297 298 3.053455 ACAACAACAACAACAACAACGG 58.947 40.909 0.00 0.00 0.00 4.44
298 299 4.026475 ACAACAACAACAACAACAACAACG 60.026 37.500 0.00 0.00 0.00 4.10
299 300 5.396750 ACAACAACAACAACAACAACAAC 57.603 34.783 0.00 0.00 0.00 3.32
300 301 5.351465 ACAACAACAACAACAACAACAACAA 59.649 32.000 0.00 0.00 0.00 2.83
301 302 4.870426 ACAACAACAACAACAACAACAACA 59.130 33.333 0.00 0.00 0.00 3.33
302 303 5.396750 ACAACAACAACAACAACAACAAC 57.603 34.783 0.00 0.00 0.00 3.32
303 304 5.351465 ACAACAACAACAACAACAACAACAA 59.649 32.000 0.00 0.00 0.00 2.83
304 305 4.870426 ACAACAACAACAACAACAACAACA 59.130 33.333 0.00 0.00 0.00 3.33
305 306 5.396750 ACAACAACAACAACAACAACAAC 57.603 34.783 0.00 0.00 0.00 3.32
306 307 5.351465 ACAACAACAACAACAACAACAACAA 59.649 32.000 0.00 0.00 0.00 2.83
307 308 4.870426 ACAACAACAACAACAACAACAACA 59.130 33.333 0.00 0.00 0.00 3.33
308 309 5.396750 ACAACAACAACAACAACAACAAC 57.603 34.783 0.00 0.00 0.00 3.32
309 310 5.351465 ACAACAACAACAACAACAACAACAA 59.649 32.000 0.00 0.00 0.00 2.83
310 311 4.870426 ACAACAACAACAACAACAACAACA 59.130 33.333 0.00 0.00 0.00 3.33
311 312 5.396750 ACAACAACAACAACAACAACAAC 57.603 34.783 0.00 0.00 0.00 3.32
312 313 5.351465 ACAACAACAACAACAACAACAACAA 59.649 32.000 0.00 0.00 0.00 2.83
313 314 4.870426 ACAACAACAACAACAACAACAACA 59.130 33.333 0.00 0.00 0.00 3.33
314 315 5.396750 ACAACAACAACAACAACAACAAC 57.603 34.783 0.00 0.00 0.00 3.32
315 316 5.351465 ACAACAACAACAACAACAACAACAA 59.649 32.000 0.00 0.00 0.00 2.83
316 317 4.870426 ACAACAACAACAACAACAACAACA 59.130 33.333 0.00 0.00 0.00 3.33
317 318 5.396750 ACAACAACAACAACAACAACAAC 57.603 34.783 0.00 0.00 0.00 3.32
318 319 5.351465 ACAACAACAACAACAACAACAACAA 59.649 32.000 0.00 0.00 0.00 2.83
319 320 4.870426 ACAACAACAACAACAACAACAACA 59.130 33.333 0.00 0.00 0.00 3.33
320 321 5.396750 ACAACAACAACAACAACAACAAC 57.603 34.783 0.00 0.00 0.00 3.32
321 322 5.351465 ACAACAACAACAACAACAACAACAA 59.649 32.000 0.00 0.00 0.00 2.83
322 323 4.870426 ACAACAACAACAACAACAACAACA 59.130 33.333 0.00 0.00 0.00 3.33
323 324 5.396750 ACAACAACAACAACAACAACAAC 57.603 34.783 0.00 0.00 0.00 3.32
324 325 5.351465 ACAACAACAACAACAACAACAACAA 59.649 32.000 0.00 0.00 0.00 2.83
325 326 4.870426 ACAACAACAACAACAACAACAACA 59.130 33.333 0.00 0.00 0.00 3.33
326 327 5.396750 ACAACAACAACAACAACAACAAC 57.603 34.783 0.00 0.00 0.00 3.32
327 328 4.207224 CGACAACAACAACAACAACAACAA 59.793 37.500 0.00 0.00 0.00 2.83
328 329 3.731216 CGACAACAACAACAACAACAACA 59.269 39.130 0.00 0.00 0.00 3.33
329 330 3.731717 ACGACAACAACAACAACAACAAC 59.268 39.130 0.00 0.00 0.00 3.32
330 331 3.731216 CACGACAACAACAACAACAACAA 59.269 39.130 0.00 0.00 0.00 2.83
331 332 3.300857 CACGACAACAACAACAACAACA 58.699 40.909 0.00 0.00 0.00 3.33
332 333 2.089887 GCACGACAACAACAACAACAAC 59.910 45.455 0.00 0.00 0.00 3.32
333 334 2.320367 GCACGACAACAACAACAACAA 58.680 42.857 0.00 0.00 0.00 2.83
334 335 1.401670 GGCACGACAACAACAACAACA 60.402 47.619 0.00 0.00 0.00 3.33
335 336 1.135517 AGGCACGACAACAACAACAAC 60.136 47.619 0.00 0.00 0.00 3.32
336 337 1.131504 GAGGCACGACAACAACAACAA 59.868 47.619 0.00 0.00 0.00 2.83
337 338 0.730265 GAGGCACGACAACAACAACA 59.270 50.000 0.00 0.00 0.00 3.33
338 339 1.014352 AGAGGCACGACAACAACAAC 58.986 50.000 0.00 0.00 0.00 3.32
339 340 1.400142 CAAGAGGCACGACAACAACAA 59.600 47.619 0.00 0.00 0.00 2.83
340 341 1.013596 CAAGAGGCACGACAACAACA 58.986 50.000 0.00 0.00 0.00 3.33
341 342 0.317020 GCAAGAGGCACGACAACAAC 60.317 55.000 0.00 0.00 43.97 3.32
342 343 2.021722 GCAAGAGGCACGACAACAA 58.978 52.632 0.00 0.00 43.97 2.83
343 344 3.731136 GCAAGAGGCACGACAACA 58.269 55.556 0.00 0.00 43.97 3.33
353 354 4.785453 GGAGGCACCGGCAAGAGG 62.785 72.222 0.00 0.00 43.71 3.69
354 355 3.551496 TTGGAGGCACCGGCAAGAG 62.551 63.158 0.00 0.00 43.71 2.85
355 356 3.565214 TTGGAGGCACCGGCAAGA 61.565 61.111 0.00 0.00 43.71 3.02
356 357 3.365265 GTTGGAGGCACCGGCAAG 61.365 66.667 0.00 0.00 43.71 4.01
359 360 3.887335 TTACGTTGGAGGCACCGGC 62.887 63.158 0.00 0.00 42.61 6.13
360 361 2.030958 GTTACGTTGGAGGCACCGG 61.031 63.158 0.00 0.00 42.61 5.28
361 362 1.005394 AGTTACGTTGGAGGCACCG 60.005 57.895 0.00 0.00 42.61 4.94
362 363 0.953960 CCAGTTACGTTGGAGGCACC 60.954 60.000 0.00 0.00 37.96 5.01
363 364 0.953960 CCCAGTTACGTTGGAGGCAC 60.954 60.000 6.32 0.00 37.96 5.01
364 365 1.373435 CCCAGTTACGTTGGAGGCA 59.627 57.895 6.32 0.00 37.96 4.75
365 366 0.250597 AACCCAGTTACGTTGGAGGC 60.251 55.000 6.32 0.00 37.96 4.70
366 367 1.519408 CAACCCAGTTACGTTGGAGG 58.481 55.000 6.32 0.00 37.96 4.30
367 368 0.872388 GCAACCCAGTTACGTTGGAG 59.128 55.000 6.32 0.00 39.79 3.86
368 369 0.180642 TGCAACCCAGTTACGTTGGA 59.819 50.000 6.32 0.00 39.79 3.53
369 370 1.199097 GATGCAACCCAGTTACGTTGG 59.801 52.381 0.00 0.00 39.79 3.77
370 371 1.136085 CGATGCAACCCAGTTACGTTG 60.136 52.381 0.00 0.00 41.84 4.10
371 372 1.153353 CGATGCAACCCAGTTACGTT 58.847 50.000 0.00 0.00 0.00 3.99
372 373 1.296056 GCGATGCAACCCAGTTACGT 61.296 55.000 0.00 0.00 0.00 3.57
373 374 1.019278 AGCGATGCAACCCAGTTACG 61.019 55.000 0.00 0.00 0.00 3.18
374 375 1.933853 CTAGCGATGCAACCCAGTTAC 59.066 52.381 0.00 0.00 0.00 2.50
375 376 1.553248 ACTAGCGATGCAACCCAGTTA 59.447 47.619 0.00 0.00 0.00 2.24
376 377 0.324943 ACTAGCGATGCAACCCAGTT 59.675 50.000 0.00 0.00 0.00 3.16
377 378 0.391661 CACTAGCGATGCAACCCAGT 60.392 55.000 0.00 0.00 0.00 4.00
378 379 0.108186 TCACTAGCGATGCAACCCAG 60.108 55.000 0.00 0.00 0.00 4.45
379 380 0.391130 GTCACTAGCGATGCAACCCA 60.391 55.000 0.00 0.00 0.00 4.51
380 381 0.391130 TGTCACTAGCGATGCAACCC 60.391 55.000 0.00 0.00 0.00 4.11
381 382 1.328680 CATGTCACTAGCGATGCAACC 59.671 52.381 0.00 0.00 0.00 3.77
382 383 1.328680 CCATGTCACTAGCGATGCAAC 59.671 52.381 0.00 0.00 0.00 4.17
383 384 1.655484 CCATGTCACTAGCGATGCAA 58.345 50.000 0.00 0.00 0.00 4.08
384 385 0.811219 GCCATGTCACTAGCGATGCA 60.811 55.000 0.00 0.00 0.00 3.96
385 386 0.811219 TGCCATGTCACTAGCGATGC 60.811 55.000 0.00 0.00 0.00 3.91
386 387 0.933097 GTGCCATGTCACTAGCGATG 59.067 55.000 0.00 0.00 34.29 3.84
387 388 0.179073 GGTGCCATGTCACTAGCGAT 60.179 55.000 6.86 0.00 37.16 4.58
388 389 1.218047 GGTGCCATGTCACTAGCGA 59.782 57.895 6.86 0.00 37.16 4.93
389 390 1.079197 TGGTGCCATGTCACTAGCG 60.079 57.895 6.86 0.00 37.16 4.26
390 391 0.250234 TCTGGTGCCATGTCACTAGC 59.750 55.000 14.66 0.00 42.85 3.42
391 392 1.134580 CCTCTGGTGCCATGTCACTAG 60.135 57.143 13.45 13.45 44.00 2.57
392 393 0.904649 CCTCTGGTGCCATGTCACTA 59.095 55.000 6.86 0.00 37.16 2.74
393 394 1.130054 ACCTCTGGTGCCATGTCACT 61.130 55.000 6.86 0.00 37.16 3.41
394 395 1.376466 ACCTCTGGTGCCATGTCAC 59.624 57.895 0.00 0.00 32.98 3.67
395 396 3.905454 ACCTCTGGTGCCATGTCA 58.095 55.556 0.00 0.00 32.98 3.58
404 405 3.699894 CAGCGAGCCACCTCTGGT 61.700 66.667 0.00 0.00 40.17 4.00
405 406 3.655810 GACAGCGAGCCACCTCTGG 62.656 68.421 0.00 0.00 41.13 3.86
406 407 2.125753 GACAGCGAGCCACCTCTG 60.126 66.667 0.00 0.00 35.90 3.35
407 408 3.753434 CGACAGCGAGCCACCTCT 61.753 66.667 0.00 0.00 40.82 3.69
425 426 3.506096 TCGACAGCGGCCGACTAG 61.506 66.667 33.48 20.06 38.28 2.57
437 438 2.434658 AATCTGCCGCTGTGTCGACA 62.435 55.000 15.76 15.76 0.00 4.35
438 439 1.291877 AAATCTGCCGCTGTGTCGAC 61.292 55.000 9.11 9.11 0.00 4.20
439 440 1.005037 AAATCTGCCGCTGTGTCGA 60.005 52.632 0.00 0.00 0.00 4.20
440 441 1.421485 GAAATCTGCCGCTGTGTCG 59.579 57.895 0.00 0.00 0.00 4.35
441 442 1.648467 GGGAAATCTGCCGCTGTGTC 61.648 60.000 0.00 0.00 0.00 3.67
442 443 1.675641 GGGAAATCTGCCGCTGTGT 60.676 57.895 0.00 0.00 0.00 3.72
443 444 0.962356 AAGGGAAATCTGCCGCTGTG 60.962 55.000 0.00 0.00 38.32 3.66
444 445 0.251341 AAAGGGAAATCTGCCGCTGT 60.251 50.000 0.00 0.00 38.32 4.40
445 446 0.890683 AAAAGGGAAATCTGCCGCTG 59.109 50.000 0.00 0.00 38.32 5.18
446 447 1.632589 AAAAAGGGAAATCTGCCGCT 58.367 45.000 0.00 0.00 38.32 5.52
468 469 9.883142 TTCAAATTTGTTTTGTCTTCACCTATT 57.117 25.926 17.47 0.00 44.25 1.73
469 470 9.883142 TTTCAAATTTGTTTTGTCTTCACCTAT 57.117 25.926 17.47 0.00 44.25 2.57
470 471 9.712305 TTTTCAAATTTGTTTTGTCTTCACCTA 57.288 25.926 17.47 0.00 44.25 3.08
471 472 8.614469 TTTTCAAATTTGTTTTGTCTTCACCT 57.386 26.923 17.47 0.00 44.25 4.00
472 473 9.328721 CTTTTTCAAATTTGTTTTGTCTTCACC 57.671 29.630 17.47 0.00 44.25 4.02
473 474 9.328721 CCTTTTTCAAATTTGTTTTGTCTTCAC 57.671 29.630 17.47 0.00 44.25 3.18
474 475 9.061435 ACCTTTTTCAAATTTGTTTTGTCTTCA 57.939 25.926 17.47 0.00 44.25 3.02
477 478 9.719355 AGTACCTTTTTCAAATTTGTTTTGTCT 57.281 25.926 17.47 4.85 44.25 3.41
478 479 9.753669 CAGTACCTTTTTCAAATTTGTTTTGTC 57.246 29.630 17.47 2.93 44.25 3.18
479 480 9.278978 ACAGTACCTTTTTCAAATTTGTTTTGT 57.721 25.926 17.47 10.78 44.25 2.83
482 483 9.930693 TGTACAGTACCTTTTTCAAATTTGTTT 57.069 25.926 17.47 0.00 0.00 2.83
491 492 9.179909 TGAAAAGAATGTACAGTACCTTTTTCA 57.820 29.630 22.21 22.21 0.00 2.69
492 493 9.447040 GTGAAAAGAATGTACAGTACCTTTTTC 57.553 33.333 18.14 18.10 0.00 2.29
493 494 8.962679 TGTGAAAAGAATGTACAGTACCTTTTT 58.037 29.630 18.14 12.56 0.00 1.94
494 495 8.514330 TGTGAAAAGAATGTACAGTACCTTTT 57.486 30.769 17.49 17.49 0.00 2.27
495 496 8.691661 ATGTGAAAAGAATGTACAGTACCTTT 57.308 30.769 8.30 7.73 0.00 3.11
496 497 8.157476 AGATGTGAAAAGAATGTACAGTACCTT 58.843 33.333 8.30 4.61 0.00 3.50
497 498 7.680730 AGATGTGAAAAGAATGTACAGTACCT 58.319 34.615 8.30 0.00 0.00 3.08
498 499 7.907214 AGATGTGAAAAGAATGTACAGTACC 57.093 36.000 8.30 0.00 0.00 3.34
573 574 7.696992 AACTTGTCAAGACAACCTCTAAAAA 57.303 32.000 19.53 0.00 45.42 1.94
574 575 7.696992 AAACTTGTCAAGACAACCTCTAAAA 57.303 32.000 19.53 0.00 45.42 1.52
575 576 8.795842 TTAAACTTGTCAAGACAACCTCTAAA 57.204 30.769 19.53 0.56 45.42 1.85
576 577 8.795842 TTTAAACTTGTCAAGACAACCTCTAA 57.204 30.769 19.53 5.19 45.42 2.10
577 578 8.974060 ATTTAAACTTGTCAAGACAACCTCTA 57.026 30.769 19.53 0.00 45.42 2.43
578 579 7.881775 ATTTAAACTTGTCAAGACAACCTCT 57.118 32.000 19.53 0.70 45.42 3.69
579 580 8.807581 CAAATTTAAACTTGTCAAGACAACCTC 58.192 33.333 19.53 0.00 45.42 3.85
580 581 8.527810 TCAAATTTAAACTTGTCAAGACAACCT 58.472 29.630 19.53 0.00 45.42 3.50
581 582 8.696410 TCAAATTTAAACTTGTCAAGACAACC 57.304 30.769 19.53 0.00 45.42 3.77
615 616 9.857656 CCCTTATATGCTACCATGATATCAATT 57.142 33.333 9.99 0.00 32.85 2.32
616 617 7.941238 GCCCTTATATGCTACCATGATATCAAT 59.059 37.037 9.99 1.19 32.85 2.57
617 618 7.282585 GCCCTTATATGCTACCATGATATCAA 58.717 38.462 9.99 0.00 32.85 2.57
618 619 6.183361 GGCCCTTATATGCTACCATGATATCA 60.183 42.308 8.10 8.10 32.85 2.15
619 620 6.234177 GGCCCTTATATGCTACCATGATATC 58.766 44.000 0.00 0.00 32.85 1.63
620 621 5.221722 CGGCCCTTATATGCTACCATGATAT 60.222 44.000 0.00 0.00 32.85 1.63
621 622 4.100963 CGGCCCTTATATGCTACCATGATA 59.899 45.833 0.00 0.00 32.85 2.15
622 623 3.118261 CGGCCCTTATATGCTACCATGAT 60.118 47.826 0.00 0.00 32.85 2.45
623 624 2.236146 CGGCCCTTATATGCTACCATGA 59.764 50.000 0.00 0.00 32.85 3.07
624 625 2.632377 CGGCCCTTATATGCTACCATG 58.368 52.381 0.00 0.00 32.85 3.66
625 626 1.559682 CCGGCCCTTATATGCTACCAT 59.440 52.381 0.00 0.00 35.44 3.55
626 627 0.981183 CCGGCCCTTATATGCTACCA 59.019 55.000 0.00 0.00 0.00 3.25
627 628 0.981943 ACCGGCCCTTATATGCTACC 59.018 55.000 0.00 0.00 0.00 3.18
628 629 3.449737 TGATACCGGCCCTTATATGCTAC 59.550 47.826 0.00 0.00 0.00 3.58
629 630 3.704566 CTGATACCGGCCCTTATATGCTA 59.295 47.826 0.00 0.00 0.00 3.49
630 631 2.501723 CTGATACCGGCCCTTATATGCT 59.498 50.000 0.00 0.00 0.00 3.79
631 632 2.906354 CTGATACCGGCCCTTATATGC 58.094 52.381 0.00 0.00 0.00 3.14
632 633 2.501723 AGCTGATACCGGCCCTTATATG 59.498 50.000 0.00 0.00 45.76 1.78
633 634 2.501723 CAGCTGATACCGGCCCTTATAT 59.498 50.000 8.42 0.00 45.76 0.86
634 635 1.899814 CAGCTGATACCGGCCCTTATA 59.100 52.381 8.42 0.00 45.76 0.98
635 636 0.687354 CAGCTGATACCGGCCCTTAT 59.313 55.000 8.42 0.00 45.76 1.73
636 637 0.397957 TCAGCTGATACCGGCCCTTA 60.398 55.000 13.74 0.00 45.76 2.69
637 638 1.056700 ATCAGCTGATACCGGCCCTT 61.057 55.000 27.73 0.00 45.76 3.95
638 639 0.178932 TATCAGCTGATACCGGCCCT 60.179 55.000 28.69 8.96 45.76 5.19
639 640 0.905357 ATATCAGCTGATACCGGCCC 59.095 55.000 33.31 0.00 45.76 5.80
640 641 2.770164 AATATCAGCTGATACCGGCC 57.230 50.000 33.31 0.00 45.76 6.13
641 642 3.437049 GGAAAATATCAGCTGATACCGGC 59.563 47.826 33.31 22.92 44.96 6.13
642 643 4.003648 GGGAAAATATCAGCTGATACCGG 58.996 47.826 33.31 0.00 39.57 5.28
643 644 4.003648 GGGGAAAATATCAGCTGATACCG 58.996 47.826 33.31 0.00 39.57 4.02
644 645 4.003648 CGGGGAAAATATCAGCTGATACC 58.996 47.826 33.31 27.88 39.57 2.73
645 646 3.437049 GCGGGGAAAATATCAGCTGATAC 59.563 47.826 33.31 21.87 39.57 2.24
646 647 3.327757 AGCGGGGAAAATATCAGCTGATA 59.672 43.478 32.86 32.86 40.85 2.15
647 648 2.107204 AGCGGGGAAAATATCAGCTGAT 59.893 45.455 30.85 30.85 34.82 2.90
648 649 1.490490 AGCGGGGAAAATATCAGCTGA 59.510 47.619 20.79 20.79 34.82 4.26
649 650 1.605710 CAGCGGGGAAAATATCAGCTG 59.394 52.381 7.63 7.63 42.11 4.24
650 651 1.212935 ACAGCGGGGAAAATATCAGCT 59.787 47.619 0.00 0.00 35.94 4.24
651 652 1.680338 ACAGCGGGGAAAATATCAGC 58.320 50.000 0.00 0.00 0.00 4.26
652 653 3.065371 GTCAACAGCGGGGAAAATATCAG 59.935 47.826 0.00 0.00 0.00 2.90
653 654 3.013921 GTCAACAGCGGGGAAAATATCA 58.986 45.455 0.00 0.00 0.00 2.15
654 655 3.013921 TGTCAACAGCGGGGAAAATATC 58.986 45.455 0.00 0.00 0.00 1.63
655 656 2.752903 GTGTCAACAGCGGGGAAAATAT 59.247 45.455 0.00 0.00 0.00 1.28
656 657 2.156098 GTGTCAACAGCGGGGAAAATA 58.844 47.619 0.00 0.00 0.00 1.40
657 658 0.958822 GTGTCAACAGCGGGGAAAAT 59.041 50.000 0.00 0.00 0.00 1.82
658 659 0.394488 TGTGTCAACAGCGGGGAAAA 60.394 50.000 0.00 0.00 0.00 2.29
659 660 0.179004 ATGTGTCAACAGCGGGGAAA 60.179 50.000 0.00 0.00 40.39 3.13
660 661 0.687920 TATGTGTCAACAGCGGGGAA 59.312 50.000 0.00 0.00 40.39 3.97
661 662 0.249120 CTATGTGTCAACAGCGGGGA 59.751 55.000 0.00 0.00 40.39 4.81
662 663 0.744414 CCTATGTGTCAACAGCGGGG 60.744 60.000 0.00 0.00 40.39 5.73
663 664 0.744414 CCCTATGTGTCAACAGCGGG 60.744 60.000 2.11 2.11 40.99 6.13
671 672 2.846206 AGAAATCTGGCCCTATGTGTCA 59.154 45.455 0.00 0.00 0.00 3.58
768 770 7.044966 CGCGCTTTTCGATTTTATATTGAAAGT 60.045 33.333 5.56 0.00 41.67 2.66
769 771 7.259642 CGCGCTTTTCGATTTTATATTGAAAG 58.740 34.615 5.56 0.00 41.67 2.62
772 774 4.668837 GCGCGCTTTTCGATTTTATATTGA 59.331 37.500 26.67 0.00 41.67 2.57
773 775 4.428551 CGCGCGCTTTTCGATTTTATATTG 60.429 41.667 30.48 2.17 41.67 1.90
804 809 2.108771 GCTGAGCTGGCTAGAGGC 59.891 66.667 0.00 0.00 41.50 4.70
805 810 0.461693 GTTGCTGAGCTGGCTAGAGG 60.462 60.000 5.83 0.00 0.00 3.69
809 814 1.079819 GTCGTTGCTGAGCTGGCTA 60.080 57.895 5.83 0.00 0.00 3.93
830 835 4.278419 TCTCGATCGTGACATGGACATATT 59.722 41.667 15.94 0.00 0.00 1.28
845 884 7.383572 ACTTTTCTCATGGAAATATCTCGATCG 59.616 37.037 9.36 9.36 42.63 3.69
860 899 3.123621 CGAGGGAAACGACTTTTCTCATG 59.876 47.826 7.02 0.00 46.08 3.07
861 900 3.326747 CGAGGGAAACGACTTTTCTCAT 58.673 45.455 7.02 0.00 46.08 2.90
866 905 2.103601 TCTTCCGAGGGAAACGACTTTT 59.896 45.455 0.00 0.00 41.54 2.27
929 968 0.101939 GGAATACGTGGAGGTCGGAC 59.898 60.000 0.00 0.00 0.00 4.79
934 973 1.262640 AAGCGGGAATACGTGGAGGT 61.263 55.000 0.00 0.00 35.98 3.85
979 1023 0.251077 AGCAAGGACCTTCCAGCTTG 60.251 55.000 10.93 0.00 44.25 4.01
1073 1125 1.132500 GAGGTGGATAAGGGAGGGTG 58.868 60.000 0.00 0.00 0.00 4.61
1074 1126 0.722676 TGAGGTGGATAAGGGAGGGT 59.277 55.000 0.00 0.00 0.00 4.34
1125 1180 1.231928 GGAGGTGGTTGGGTTTGGT 59.768 57.895 0.00 0.00 0.00 3.67
1144 1210 2.081161 GGGGGTGCAGGGAGATGAT 61.081 63.158 0.00 0.00 0.00 2.45
1146 1212 4.181010 CGGGGGTGCAGGGAGATG 62.181 72.222 0.00 0.00 0.00 2.90
1147 1213 4.414956 TCGGGGGTGCAGGGAGAT 62.415 66.667 0.00 0.00 0.00 2.75
1181 1247 3.702048 GGTACTGGTGCTGCGGGA 61.702 66.667 0.00 0.00 0.00 5.14
1195 1261 2.284039 TAGCCGGTGGTGCTGGTA 60.284 61.111 1.90 0.00 45.57 3.25
1200 1266 4.489771 ATGGCTAGCCGGTGGTGC 62.490 66.667 28.28 2.72 39.42 5.01
1203 1269 3.479203 TCCATGGCTAGCCGGTGG 61.479 66.667 35.44 35.44 42.36 4.61
1205 1271 3.849951 CGTCCATGGCTAGCCGGT 61.850 66.667 28.28 17.02 39.42 5.28
1206 1272 3.536917 TCGTCCATGGCTAGCCGG 61.537 66.667 28.28 23.33 39.42 6.13
1207 1273 2.279517 GTCGTCCATGGCTAGCCG 60.280 66.667 28.28 15.14 39.42 5.52
1208 1274 0.811616 CTTGTCGTCCATGGCTAGCC 60.812 60.000 27.71 27.71 0.00 3.93
1209 1275 0.811616 CCTTGTCGTCCATGGCTAGC 60.812 60.000 6.96 6.04 32.19 3.42
1210 1276 0.824109 TCCTTGTCGTCCATGGCTAG 59.176 55.000 6.96 0.27 38.09 3.42
1211 1277 0.535335 GTCCTTGTCGTCCATGGCTA 59.465 55.000 6.96 0.00 38.09 3.93
1223 1289 1.370064 GGTGTGGCGTAGTCCTTGT 59.630 57.895 0.00 0.00 0.00 3.16
1348 1414 0.760945 AAGGGATAGGAGACCTGCGG 60.761 60.000 0.00 0.00 34.61 5.69
1527 1593 3.120385 TCGACGGCTTGCTGCATG 61.120 61.111 1.84 7.23 45.15 4.06
1904 1982 0.107268 TGTGAGCAGAGCAGAAGCAA 59.893 50.000 0.00 0.00 45.49 3.91
1942 2023 1.569479 GGCGCAGTCTTGACTGGAAC 61.569 60.000 25.99 12.74 38.14 3.62
1945 2026 3.114616 CGGCGCAGTCTTGACTGG 61.115 66.667 25.99 18.52 38.14 4.00
2076 2157 0.249911 AGCAGGCGAACGTCTTCTTT 60.250 50.000 0.00 0.00 0.00 2.52
2472 2559 0.247460 CAGAGAGCCACGAACATGGA 59.753 55.000 0.00 0.00 43.02 3.41
2475 2562 4.606071 GCAGAGAGCCACGAACAT 57.394 55.556 0.00 0.00 37.23 2.71
2514 2601 1.305930 ATCCGCCCGAAAAACAGAGC 61.306 55.000 0.00 0.00 0.00 4.09
2515 2602 0.727398 GATCCGCCCGAAAAACAGAG 59.273 55.000 0.00 0.00 0.00 3.35
2552 2639 3.059188 CACACGAAAATCCACTACACACC 60.059 47.826 0.00 0.00 0.00 4.16
2582 2669 2.993899 ACACAAGCGTATAGACAACAGC 59.006 45.455 0.00 0.00 0.00 4.40
2704 2865 3.739401 AGGGCAAGCCATAAGTAACTT 57.261 42.857 13.87 0.00 37.98 2.66
2708 2869 2.930826 GCTAGGGCAAGCCATAAGTA 57.069 50.000 13.87 0.00 36.45 2.24
2747 2908 3.812019 CTCCGACGTCACCGGGAG 61.812 72.222 18.82 18.82 46.47 4.30
2765 2926 4.083862 AAGACTTCCCGAGGCCGC 62.084 66.667 0.00 0.00 31.76 6.53
2766 2927 2.125512 CAAGACTTCCCGAGGCCG 60.126 66.667 0.00 0.00 31.76 6.13
2767 2928 2.245438 CTCCAAGACTTCCCGAGGCC 62.245 65.000 0.00 0.00 31.76 5.19
2768 2929 1.219393 CTCCAAGACTTCCCGAGGC 59.781 63.158 0.00 0.00 0.00 4.70
2769 2930 0.905337 ACCTCCAAGACTTCCCGAGG 60.905 60.000 16.10 16.10 44.74 4.63
2770 2931 0.533032 GACCTCCAAGACTTCCCGAG 59.467 60.000 0.00 0.00 0.00 4.63
2771 2932 0.114560 AGACCTCCAAGACTTCCCGA 59.885 55.000 0.00 0.00 0.00 5.14
2772 2933 0.247736 CAGACCTCCAAGACTTCCCG 59.752 60.000 0.00 0.00 0.00 5.14
2773 2934 1.353091 ACAGACCTCCAAGACTTCCC 58.647 55.000 0.00 0.00 0.00 3.97
2774 2935 2.104963 ACAACAGACCTCCAAGACTTCC 59.895 50.000 0.00 0.00 0.00 3.46
2775 2936 3.134458 CACAACAGACCTCCAAGACTTC 58.866 50.000 0.00 0.00 0.00 3.01
2776 2937 2.771943 TCACAACAGACCTCCAAGACTT 59.228 45.455 0.00 0.00 0.00 3.01
2777 2938 2.398588 TCACAACAGACCTCCAAGACT 58.601 47.619 0.00 0.00 0.00 3.24
2778 2939 2.910688 TCACAACAGACCTCCAAGAC 57.089 50.000 0.00 0.00 0.00 3.01
2779 2940 4.220821 GTCTATCACAACAGACCTCCAAGA 59.779 45.833 0.00 0.00 36.06 3.02
2780 2941 4.499183 GTCTATCACAACAGACCTCCAAG 58.501 47.826 0.00 0.00 36.06 3.61
2781 2942 4.537135 GTCTATCACAACAGACCTCCAA 57.463 45.455 0.00 0.00 36.06 3.53
2787 2948 5.652891 TCTTAGAGGGTCTATCACAACAGAC 59.347 44.000 0.00 0.00 40.40 3.51
2788 2949 5.827756 TCTTAGAGGGTCTATCACAACAGA 58.172 41.667 0.00 0.00 0.00 3.41
2789 2950 6.322456 TGATCTTAGAGGGTCTATCACAACAG 59.678 42.308 0.00 0.00 0.00 3.16
2790 2951 6.096987 GTGATCTTAGAGGGTCTATCACAACA 59.903 42.308 11.12 0.00 38.72 3.33
2791 2952 6.461788 GGTGATCTTAGAGGGTCTATCACAAC 60.462 46.154 15.35 2.12 39.76 3.32
2792 2953 5.598830 GGTGATCTTAGAGGGTCTATCACAA 59.401 44.000 15.35 0.00 39.76 3.33
2793 2954 5.103473 AGGTGATCTTAGAGGGTCTATCACA 60.103 44.000 15.35 1.18 39.76 3.58
2855 3021 1.611006 TCTCTCGGATGCATAGACAGC 59.389 52.381 0.00 0.00 0.00 4.40
2874 3040 4.202243 CCCATCTCTCCATGTTTCTCTCTC 60.202 50.000 0.00 0.00 0.00 3.20
2875 3041 3.710677 CCCATCTCTCCATGTTTCTCTCT 59.289 47.826 0.00 0.00 0.00 3.10
2887 3053 1.036707 CTCTTCGTCCCCATCTCTCC 58.963 60.000 0.00 0.00 0.00 3.71
2960 3128 0.612732 CACACCCTGCCATCACCATT 60.613 55.000 0.00 0.00 0.00 3.16
2962 3130 2.435663 CACACCCTGCCATCACCA 59.564 61.111 0.00 0.00 0.00 4.17
3004 3178 2.946785 ACCTAGATAGTGACGGGAAGG 58.053 52.381 0.00 0.00 0.00 3.46
3020 3194 0.612732 CCCACCGACACACCTACCTA 60.613 60.000 0.00 0.00 0.00 3.08
3021 3195 1.911766 CCCACCGACACACCTACCT 60.912 63.158 0.00 0.00 0.00 3.08
3095 3286 2.669569 CCCCTGTCACCTGCGTTG 60.670 66.667 0.00 0.00 0.00 4.10
3140 3336 2.862674 TTAATCCACGCCCTGGTCGC 62.863 60.000 0.00 0.00 41.52 5.19
3144 3340 1.152963 CCCTTAATCCACGCCCTGG 60.153 63.158 0.00 0.00 42.29 4.45
3172 3369 1.672854 CTCCCGTATGAGCCCAACGA 61.673 60.000 4.93 0.00 38.89 3.85
3181 3378 2.091278 AGGTTGATCTCCTCCCGTATGA 60.091 50.000 4.58 0.00 0.00 2.15
3184 3381 3.294214 GTTAGGTTGATCTCCTCCCGTA 58.706 50.000 12.06 0.00 36.60 4.02
3283 3484 4.216257 AGCTGTGACGATAAAACATGCTTT 59.784 37.500 0.00 0.00 29.79 3.51
3284 3485 3.753272 AGCTGTGACGATAAAACATGCTT 59.247 39.130 0.00 0.00 29.79 3.91
3311 3512 2.766263 TGGTTGTCTGATTCTATCGGCT 59.234 45.455 0.00 0.00 35.60 5.52
3331 3532 6.618287 TTCAAAACAGAGAGGTATGTTGTG 57.382 37.500 2.50 2.50 42.34 3.33
3361 3562 4.706842 TGAGAGGCCTAAAAGAAACAGT 57.293 40.909 4.42 0.00 0.00 3.55
3367 3568 6.377080 TCTAGATCATGAGAGGCCTAAAAGA 58.623 40.000 4.42 0.22 0.00 2.52
3373 3575 5.153675 TGATTTCTAGATCATGAGAGGCCT 58.846 41.667 3.86 3.86 31.35 5.19
3391 3593 7.182060 TGGGTTTAAGAGAAAGGCTATGATTT 58.818 34.615 0.00 0.00 0.00 2.17
3400 3602 4.708726 CAGCATGGGTTTAAGAGAAAGG 57.291 45.455 0.00 0.00 0.00 3.11


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.