Multiple sequence alignment - TraesCS5A01G439500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G439500 chr5A 100.000 2336 0 0 1 2336 621007971 621005636 0 4314
1 TraesCS5A01G439500 chr5A 90.560 1695 144 12 2 1684 648908919 648907229 0 2230
2 TraesCS5A01G439500 chr5A 86.529 1403 172 15 291 1686 35638352 35636960 0 1528
3 TraesCS5A01G439500 chr5A 90.015 651 56 9 1038 1682 599774859 599774212 0 833
4 TraesCS5A01G439500 chr7A 97.087 1682 48 1 1 1682 149312246 149310566 0 2833
5 TraesCS5A01G439500 chr4A 95.552 1686 44 7 4 1685 477027584 477025926 0 2669
6 TraesCS5A01G439500 chr4A 88.935 1681 166 17 6 1681 163215661 163213996 0 2056
7 TraesCS5A01G439500 chr4A 92.536 1045 78 0 2 1046 89694025 89692981 0 1498
8 TraesCS5A01G439500 chr4A 90.308 650 54 9 1038 1682 89684265 89683620 0 843
9 TraesCS5A01G439500 chr5D 88.050 1682 183 16 1 1679 311901586 311903252 0 1977
10 TraesCS5A01G439500 chr1D 87.825 1692 185 19 1 1683 408846512 408848191 0 1964
11 TraesCS5A01G439500 chr2A 78.496 1237 250 13 3 1233 5011828 5010602 0 797


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G439500 chr5A 621005636 621007971 2335 True 4314 4314 100.000 1 2336 1 chr5A.!!$R3 2335
1 TraesCS5A01G439500 chr5A 648907229 648908919 1690 True 2230 2230 90.560 2 1684 1 chr5A.!!$R4 1682
2 TraesCS5A01G439500 chr5A 35636960 35638352 1392 True 1528 1528 86.529 291 1686 1 chr5A.!!$R1 1395
3 TraesCS5A01G439500 chr5A 599774212 599774859 647 True 833 833 90.015 1038 1682 1 chr5A.!!$R2 644
4 TraesCS5A01G439500 chr7A 149310566 149312246 1680 True 2833 2833 97.087 1 1682 1 chr7A.!!$R1 1681
5 TraesCS5A01G439500 chr4A 477025926 477027584 1658 True 2669 2669 95.552 4 1685 1 chr4A.!!$R4 1681
6 TraesCS5A01G439500 chr4A 163213996 163215661 1665 True 2056 2056 88.935 6 1681 1 chr4A.!!$R3 1675
7 TraesCS5A01G439500 chr4A 89692981 89694025 1044 True 1498 1498 92.536 2 1046 1 chr4A.!!$R2 1044
8 TraesCS5A01G439500 chr4A 89683620 89684265 645 True 843 843 90.308 1038 1682 1 chr4A.!!$R1 644
9 TraesCS5A01G439500 chr5D 311901586 311903252 1666 False 1977 1977 88.050 1 1679 1 chr5D.!!$F1 1678
10 TraesCS5A01G439500 chr1D 408846512 408848191 1679 False 1964 1964 87.825 1 1683 1 chr1D.!!$F1 1682
11 TraesCS5A01G439500 chr2A 5010602 5011828 1226 True 797 797 78.496 3 1233 1 chr2A.!!$R1 1230

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
56 57 0.976641 AATTCTGCCTCGTCTGGTGA 59.023 50.0 0.0 0.0 0.0 4.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1708 1738 0.033504 TTGCGTCAAGAGTCCCACTC 59.966 55.0 0.0 0.0 45.38 3.51 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
56 57 0.976641 AATTCTGCCTCGTCTGGTGA 59.023 50.000 0.00 0.00 0.00 4.02
104 105 5.106791 CCCTCTCGAGCATTGCTTATTATTG 60.107 44.000 13.35 0.00 39.88 1.90
288 289 7.895975 TCTTCACAAACAGAATATCTCACTG 57.104 36.000 0.00 0.00 37.62 3.66
860 862 1.067295 TGGCAACTCTTCCAGGATGT 58.933 50.000 2.31 0.00 37.61 3.06
1138 1140 5.296780 GCCATTTGGAATCGTAGAAATCAGA 59.703 40.000 0.00 0.00 37.50 3.27
1166 1168 6.155827 CCTTTGAATTCAAGAAAATGGCGTA 58.844 36.000 19.64 1.35 37.15 4.42
1246 1248 2.048127 GCGAAAGGCGAGTGGAGT 60.048 61.111 0.00 0.00 44.57 3.85
1253 1255 2.343758 GCGAGTGGAGTTGGAGCA 59.656 61.111 0.00 0.00 0.00 4.26
1417 1439 3.878245 CAAGACTTTGGAGAGCGTTTTC 58.122 45.455 0.00 0.00 0.00 2.29
1530 1557 0.106918 TGGTGCTTCAGGGTTTTCGT 60.107 50.000 0.00 0.00 0.00 3.85
1697 1727 3.648339 AAAAAGTGCATGTACTGGCTG 57.352 42.857 17.67 0.00 0.00 4.85
1698 1728 2.276732 AAAGTGCATGTACTGGCTGT 57.723 45.000 17.67 1.74 0.00 4.40
1699 1729 1.527034 AAGTGCATGTACTGGCTGTG 58.473 50.000 17.67 0.00 0.00 3.66
1700 1730 0.397941 AGTGCATGTACTGGCTGTGT 59.602 50.000 16.23 0.00 0.00 3.72
1701 1731 0.518636 GTGCATGTACTGGCTGTGTG 59.481 55.000 6.69 4.92 0.00 3.82
1702 1732 1.236616 TGCATGTACTGGCTGTGTGC 61.237 55.000 17.75 17.75 41.94 4.57
1703 1733 0.957395 GCATGTACTGGCTGTGTGCT 60.957 55.000 17.49 0.00 42.39 4.40
1704 1734 0.800631 CATGTACTGGCTGTGTGCTG 59.199 55.000 7.34 0.00 42.39 4.41
1705 1735 0.397941 ATGTACTGGCTGTGTGCTGT 59.602 50.000 7.34 0.00 42.39 4.40
1706 1736 0.532640 TGTACTGGCTGTGTGCTGTG 60.533 55.000 7.34 0.00 42.39 3.66
1707 1737 1.071299 TACTGGCTGTGTGCTGTGG 59.929 57.895 7.34 0.00 42.39 4.17
1708 1738 2.395988 TACTGGCTGTGTGCTGTGGG 62.396 60.000 7.34 0.00 42.39 4.61
1709 1739 3.480679 CTGGCTGTGTGCTGTGGGA 62.481 63.158 0.00 0.00 42.39 4.37
1710 1740 2.670934 GGCTGTGTGCTGTGGGAG 60.671 66.667 0.00 0.00 42.39 4.30
1711 1741 2.111878 GCTGTGTGCTGTGGGAGT 59.888 61.111 0.00 0.00 38.95 3.85
1712 1742 2.256591 GCTGTGTGCTGTGGGAGTG 61.257 63.158 0.00 0.00 38.95 3.51
1713 1743 1.598962 CTGTGTGCTGTGGGAGTGG 60.599 63.158 0.00 0.00 0.00 4.00
1714 1744 2.281761 GTGTGCTGTGGGAGTGGG 60.282 66.667 0.00 0.00 0.00 4.61
1715 1745 2.447572 TGTGCTGTGGGAGTGGGA 60.448 61.111 0.00 0.00 0.00 4.37
1716 1746 2.032681 GTGCTGTGGGAGTGGGAC 59.967 66.667 0.00 0.00 0.00 4.46
1717 1747 2.122413 TGCTGTGGGAGTGGGACT 60.122 61.111 0.00 0.00 0.00 3.85
1718 1748 2.217038 TGCTGTGGGAGTGGGACTC 61.217 63.158 0.00 0.00 44.32 3.36
1719 1749 1.915769 GCTGTGGGAGTGGGACTCT 60.916 63.158 3.85 0.00 44.46 3.24
1720 1750 1.484444 GCTGTGGGAGTGGGACTCTT 61.484 60.000 3.85 0.00 44.46 2.85
1721 1751 0.322975 CTGTGGGAGTGGGACTCTTG 59.677 60.000 3.85 0.00 44.46 3.02
1722 1752 0.105194 TGTGGGAGTGGGACTCTTGA 60.105 55.000 3.85 0.00 44.46 3.02
1723 1753 0.321996 GTGGGAGTGGGACTCTTGAC 59.678 60.000 3.85 0.00 44.46 3.18
1724 1754 1.185618 TGGGAGTGGGACTCTTGACG 61.186 60.000 3.85 0.00 44.46 4.35
1725 1755 1.079750 GGAGTGGGACTCTTGACGC 60.080 63.158 3.85 0.00 44.46 5.19
1726 1756 1.666011 GAGTGGGACTCTTGACGCA 59.334 57.895 0.00 0.00 41.88 5.24
1727 1757 0.033504 GAGTGGGACTCTTGACGCAA 59.966 55.000 0.00 0.00 41.88 4.85
1728 1758 0.034059 AGTGGGACTCTTGACGCAAG 59.966 55.000 11.78 11.78 42.25 4.01
1730 1760 5.907619 GAGTGGGACTCTTGACGCAAGTT 62.908 52.174 15.83 7.47 46.85 2.66
1731 1761 6.583089 GAGTGGGACTCTTGACGCAAGTTA 62.583 50.000 15.83 1.76 46.85 2.24
1744 1774 4.864916 CGCAAGTTAGCATGTCTGTTAT 57.135 40.909 0.00 0.00 0.00 1.89
1745 1775 5.966636 CGCAAGTTAGCATGTCTGTTATA 57.033 39.130 0.00 0.00 0.00 0.98
1746 1776 6.344572 CGCAAGTTAGCATGTCTGTTATAA 57.655 37.500 0.00 0.00 0.00 0.98
1747 1777 6.185399 CGCAAGTTAGCATGTCTGTTATAAC 58.815 40.000 8.75 8.75 0.00 1.89
1748 1778 6.036083 CGCAAGTTAGCATGTCTGTTATAACT 59.964 38.462 16.33 0.00 33.53 2.24
1749 1779 7.413000 CGCAAGTTAGCATGTCTGTTATAACTT 60.413 37.037 16.33 0.00 37.97 2.66
1750 1780 8.879759 GCAAGTTAGCATGTCTGTTATAACTTA 58.120 33.333 16.33 2.15 36.82 2.24
1778 1808 7.186021 ACCTTGAGTGTTATAAACTTTGTCG 57.814 36.000 0.00 0.00 0.00 4.35
1779 1809 6.077838 CCTTGAGTGTTATAAACTTTGTCGC 58.922 40.000 0.00 0.00 0.00 5.19
1780 1810 6.293190 CCTTGAGTGTTATAAACTTTGTCGCA 60.293 38.462 0.00 0.00 0.00 5.10
1781 1811 6.606234 TGAGTGTTATAAACTTTGTCGCAA 57.394 33.333 0.00 0.00 0.00 4.85
1782 1812 7.197071 TGAGTGTTATAAACTTTGTCGCAAT 57.803 32.000 0.00 0.00 0.00 3.56
1783 1813 8.312896 TGAGTGTTATAAACTTTGTCGCAATA 57.687 30.769 0.00 0.00 0.00 1.90
1784 1814 8.440059 TGAGTGTTATAAACTTTGTCGCAATAG 58.560 33.333 0.00 0.00 0.00 1.73
1785 1815 8.319143 AGTGTTATAAACTTTGTCGCAATAGT 57.681 30.769 0.00 0.00 0.00 2.12
1786 1816 8.780249 AGTGTTATAAACTTTGTCGCAATAGTT 58.220 29.630 0.00 10.84 32.52 2.24
1819 1849 9.824534 AAGTTGTTTGAATTTTGATTTTGTGTC 57.175 25.926 0.00 0.00 0.00 3.67
1820 1850 8.997323 AGTTGTTTGAATTTTGATTTTGTGTCA 58.003 25.926 0.00 0.00 0.00 3.58
1821 1851 9.264782 GTTGTTTGAATTTTGATTTTGTGTCAG 57.735 29.630 0.00 0.00 0.00 3.51
1822 1852 8.545229 TGTTTGAATTTTGATTTTGTGTCAGT 57.455 26.923 0.00 0.00 0.00 3.41
1823 1853 8.655092 TGTTTGAATTTTGATTTTGTGTCAGTC 58.345 29.630 0.00 0.00 0.00 3.51
1824 1854 8.655092 GTTTGAATTTTGATTTTGTGTCAGTCA 58.345 29.630 0.00 0.00 0.00 3.41
1825 1855 8.768957 TTGAATTTTGATTTTGTGTCAGTCAA 57.231 26.923 0.00 0.00 0.00 3.18
1826 1856 8.945481 TGAATTTTGATTTTGTGTCAGTCAAT 57.055 26.923 0.00 0.00 0.00 2.57
1827 1857 8.819015 TGAATTTTGATTTTGTGTCAGTCAATG 58.181 29.630 0.00 0.00 0.00 2.82
1828 1858 8.721019 AATTTTGATTTTGTGTCAGTCAATGT 57.279 26.923 0.00 0.00 0.00 2.71
1829 1859 7.522901 TTTTGATTTTGTGTCAGTCAATGTG 57.477 32.000 0.00 0.00 0.00 3.21
1830 1860 5.833406 TGATTTTGTGTCAGTCAATGTGT 57.167 34.783 0.00 0.00 0.00 3.72
1831 1861 5.580661 TGATTTTGTGTCAGTCAATGTGTG 58.419 37.500 0.00 0.00 0.00 3.82
1832 1862 4.368874 TTTTGTGTCAGTCAATGTGTGG 57.631 40.909 0.00 0.00 0.00 4.17
1833 1863 1.308047 TGTGTCAGTCAATGTGTGGC 58.692 50.000 0.00 0.00 0.00 5.01
1834 1864 1.308047 GTGTCAGTCAATGTGTGGCA 58.692 50.000 0.00 0.00 32.63 4.92
1835 1865 1.675483 GTGTCAGTCAATGTGTGGCAA 59.325 47.619 0.00 0.00 32.63 4.52
1836 1866 2.098934 GTGTCAGTCAATGTGTGGCAAA 59.901 45.455 0.00 0.00 32.63 3.68
1837 1867 2.757314 TGTCAGTCAATGTGTGGCAAAA 59.243 40.909 0.00 0.00 32.63 2.44
1838 1868 3.194329 TGTCAGTCAATGTGTGGCAAAAA 59.806 39.130 0.00 0.00 32.63 1.94
1839 1869 3.798337 GTCAGTCAATGTGTGGCAAAAAG 59.202 43.478 0.00 0.00 32.63 2.27
1840 1870 3.698539 TCAGTCAATGTGTGGCAAAAAGA 59.301 39.130 0.00 0.00 32.63 2.52
1841 1871 4.159321 TCAGTCAATGTGTGGCAAAAAGAA 59.841 37.500 0.00 0.00 32.63 2.52
1842 1872 4.505191 CAGTCAATGTGTGGCAAAAAGAAG 59.495 41.667 0.00 0.00 32.63 2.85
1843 1873 3.803778 GTCAATGTGTGGCAAAAAGAAGG 59.196 43.478 0.00 0.00 0.00 3.46
1844 1874 3.132925 CAATGTGTGGCAAAAAGAAGGG 58.867 45.455 0.00 0.00 0.00 3.95
1845 1875 1.118838 TGTGTGGCAAAAAGAAGGGG 58.881 50.000 0.00 0.00 0.00 4.79
1846 1876 0.392706 GTGTGGCAAAAAGAAGGGGG 59.607 55.000 0.00 0.00 0.00 5.40
1847 1877 0.263172 TGTGGCAAAAAGAAGGGGGA 59.737 50.000 0.00 0.00 0.00 4.81
1848 1878 1.343478 TGTGGCAAAAAGAAGGGGGAA 60.343 47.619 0.00 0.00 0.00 3.97
1849 1879 1.765904 GTGGCAAAAAGAAGGGGGAAA 59.234 47.619 0.00 0.00 0.00 3.13
1850 1880 2.371841 GTGGCAAAAAGAAGGGGGAAAT 59.628 45.455 0.00 0.00 0.00 2.17
1851 1881 2.371510 TGGCAAAAAGAAGGGGGAAATG 59.628 45.455 0.00 0.00 0.00 2.32
1852 1882 2.637382 GGCAAAAAGAAGGGGGAAATGA 59.363 45.455 0.00 0.00 0.00 2.57
1853 1883 3.306989 GGCAAAAAGAAGGGGGAAATGAG 60.307 47.826 0.00 0.00 0.00 2.90
1854 1884 3.306989 GCAAAAAGAAGGGGGAAATGAGG 60.307 47.826 0.00 0.00 0.00 3.86
1855 1885 2.238084 AAAGAAGGGGGAAATGAGGC 57.762 50.000 0.00 0.00 0.00 4.70
1856 1886 0.034089 AAGAAGGGGGAAATGAGGCG 60.034 55.000 0.00 0.00 0.00 5.52
1857 1887 2.043953 AAGGGGGAAATGAGGCGC 60.044 61.111 0.00 0.00 0.00 6.53
1858 1888 2.837031 GAAGGGGGAAATGAGGCGCA 62.837 60.000 10.83 0.00 0.00 6.09
1859 1889 2.123726 GGGGGAAATGAGGCGCAT 60.124 61.111 10.83 0.00 39.43 4.73
1860 1890 2.196245 GGGGGAAATGAGGCGCATC 61.196 63.158 16.46 16.46 35.78 3.91
1861 1891 1.453745 GGGGAAATGAGGCGCATCA 60.454 57.895 28.30 28.30 35.78 3.07
1862 1892 1.728490 GGGGAAATGAGGCGCATCAC 61.728 60.000 28.72 14.81 35.78 3.06
1863 1893 1.728490 GGGAAATGAGGCGCATCACC 61.728 60.000 28.72 22.96 35.78 4.02
1864 1894 1.031571 GGAAATGAGGCGCATCACCA 61.032 55.000 28.72 5.48 35.78 4.17
1865 1895 0.810648 GAAATGAGGCGCATCACCAA 59.189 50.000 28.72 4.24 35.78 3.67
1866 1896 0.813184 AAATGAGGCGCATCACCAAG 59.187 50.000 28.72 0.00 35.78 3.61
1867 1897 1.033746 AATGAGGCGCATCACCAAGG 61.034 55.000 28.72 0.00 35.78 3.61
1868 1898 3.512516 GAGGCGCATCACCAAGGC 61.513 66.667 18.55 0.00 0.00 4.35
1869 1899 3.984193 GAGGCGCATCACCAAGGCT 62.984 63.158 18.55 0.00 42.32 4.58
1870 1900 3.818787 GGCGCATCACCAAGGCTG 61.819 66.667 10.83 0.00 0.00 4.85
1871 1901 4.487412 GCGCATCACCAAGGCTGC 62.487 66.667 0.30 0.00 0.00 5.25
1872 1902 3.057548 CGCATCACCAAGGCTGCA 61.058 61.111 0.50 0.00 34.29 4.41
1873 1903 2.882876 GCATCACCAAGGCTGCAG 59.117 61.111 10.11 10.11 34.77 4.41
1874 1904 1.676635 GCATCACCAAGGCTGCAGA 60.677 57.895 20.43 0.00 34.77 4.26
1875 1905 1.035932 GCATCACCAAGGCTGCAGAT 61.036 55.000 20.43 1.05 34.77 2.90
1876 1906 0.738975 CATCACCAAGGCTGCAGATG 59.261 55.000 20.43 12.56 0.00 2.90
1877 1907 0.395311 ATCACCAAGGCTGCAGATGG 60.395 55.000 20.43 22.74 38.91 3.51
1878 1908 2.362120 ACCAAGGCTGCAGATGGC 60.362 61.111 25.01 10.98 45.13 4.40
1897 1927 3.643978 GCGCCGAGGCAAGCATAG 61.644 66.667 15.03 0.00 42.06 2.23
1898 1928 3.643978 CGCCGAGGCAAGCATAGC 61.644 66.667 15.03 0.00 42.06 2.97
1899 1929 2.514592 GCCGAGGCAAGCATAGCA 60.515 61.111 9.58 0.00 41.49 3.49
1900 1930 2.114670 GCCGAGGCAAGCATAGCAA 61.115 57.895 9.58 0.00 41.49 3.91
1901 1931 2.020131 CCGAGGCAAGCATAGCAAG 58.980 57.895 0.00 0.00 0.00 4.01
1902 1932 1.442526 CCGAGGCAAGCATAGCAAGG 61.443 60.000 0.00 0.00 0.00 3.61
1903 1933 0.462581 CGAGGCAAGCATAGCAAGGA 60.463 55.000 0.00 0.00 0.00 3.36
1904 1934 1.020437 GAGGCAAGCATAGCAAGGAC 58.980 55.000 0.00 0.00 0.00 3.85
1905 1935 0.394899 AGGCAAGCATAGCAAGGACC 60.395 55.000 0.00 0.00 0.00 4.46
1906 1936 0.680921 GGCAAGCATAGCAAGGACCA 60.681 55.000 0.00 0.00 0.00 4.02
1907 1937 0.737219 GCAAGCATAGCAAGGACCAG 59.263 55.000 0.00 0.00 0.00 4.00
1908 1938 1.386533 CAAGCATAGCAAGGACCAGG 58.613 55.000 0.00 0.00 0.00 4.45
1909 1939 0.257039 AAGCATAGCAAGGACCAGGG 59.743 55.000 0.00 0.00 0.00 4.45
1910 1940 0.621571 AGCATAGCAAGGACCAGGGA 60.622 55.000 0.00 0.00 0.00 4.20
1911 1941 0.475906 GCATAGCAAGGACCAGGGAT 59.524 55.000 0.00 0.00 0.00 3.85
1912 1942 1.816961 GCATAGCAAGGACCAGGGATG 60.817 57.143 0.00 0.00 0.00 3.51
1913 1943 0.475906 ATAGCAAGGACCAGGGATGC 59.524 55.000 0.00 0.00 37.28 3.91
1914 1944 1.635817 TAGCAAGGACCAGGGATGCC 61.636 60.000 0.00 0.00 37.73 4.40
1915 1945 2.124570 CAAGGACCAGGGATGCCG 60.125 66.667 0.00 0.00 0.00 5.69
1916 1946 3.411517 AAGGACCAGGGATGCCGG 61.412 66.667 11.53 11.53 0.00 6.13
1919 1949 4.424711 GACCAGGGATGCCGGCAA 62.425 66.667 36.33 17.74 0.00 4.52
1920 1950 4.431131 ACCAGGGATGCCGGCAAG 62.431 66.667 36.33 19.91 0.00 4.01
1947 1977 4.180496 GGGAACGAGCCGTAAGTG 57.820 61.111 0.62 0.00 39.99 3.16
1948 1978 1.447314 GGGAACGAGCCGTAAGTGG 60.447 63.158 0.62 0.00 39.99 4.00
1949 1979 1.588082 GGAACGAGCCGTAAGTGGA 59.412 57.895 0.62 0.00 39.99 4.02
1950 1980 0.458025 GGAACGAGCCGTAAGTGGAG 60.458 60.000 0.62 0.00 39.99 3.86
1951 1981 0.458025 GAACGAGCCGTAAGTGGAGG 60.458 60.000 0.62 0.00 39.99 4.30
1955 1985 4.829588 GCCGTAAGTGGAGGCTAC 57.170 61.111 0.00 0.00 46.83 3.58
1956 1986 2.200052 GCCGTAAGTGGAGGCTACT 58.800 57.895 0.00 0.00 46.83 2.57
1957 1987 1.396653 GCCGTAAGTGGAGGCTACTA 58.603 55.000 0.00 0.00 46.83 1.82
1958 1988 1.337387 GCCGTAAGTGGAGGCTACTAG 59.663 57.143 0.00 0.00 46.83 2.57
1959 1989 1.955080 CCGTAAGTGGAGGCTACTAGG 59.045 57.143 0.00 0.00 0.00 3.02
1960 1990 2.652590 CGTAAGTGGAGGCTACTAGGT 58.347 52.381 0.00 0.00 0.00 3.08
1961 1991 2.358267 CGTAAGTGGAGGCTACTAGGTG 59.642 54.545 0.00 0.00 0.00 4.00
1962 1992 1.867363 AAGTGGAGGCTACTAGGTGG 58.133 55.000 0.00 0.00 0.00 4.61
1963 1993 0.711184 AGTGGAGGCTACTAGGTGGT 59.289 55.000 0.00 0.00 0.00 4.16
1964 1994 1.078989 AGTGGAGGCTACTAGGTGGTT 59.921 52.381 0.00 0.00 0.00 3.67
1965 1995 1.207329 GTGGAGGCTACTAGGTGGTTG 59.793 57.143 0.00 0.00 0.00 3.77
1966 1996 1.078159 TGGAGGCTACTAGGTGGTTGA 59.922 52.381 0.00 0.00 0.00 3.18
1967 1997 1.481363 GGAGGCTACTAGGTGGTTGAC 59.519 57.143 0.00 0.00 0.00 3.18
1968 1998 1.134560 GAGGCTACTAGGTGGTTGACG 59.865 57.143 0.00 0.00 0.00 4.35
1969 1999 0.893447 GGCTACTAGGTGGTTGACGT 59.107 55.000 0.00 0.00 0.00 4.34
1970 2000 2.094675 GGCTACTAGGTGGTTGACGTA 58.905 52.381 0.00 0.00 0.00 3.57
1971 2001 2.159324 GGCTACTAGGTGGTTGACGTAC 60.159 54.545 0.00 0.00 0.00 3.67
1972 2002 2.476854 GCTACTAGGTGGTTGACGTACG 60.477 54.545 15.01 15.01 0.00 3.67
1973 2003 0.883833 ACTAGGTGGTTGACGTACGG 59.116 55.000 21.06 1.43 0.00 4.02
1974 2004 0.171903 CTAGGTGGTTGACGTACGGG 59.828 60.000 21.06 0.00 0.00 5.28
1975 2005 1.876497 TAGGTGGTTGACGTACGGGC 61.876 60.000 21.06 11.70 0.00 6.13
1976 2006 2.739671 GTGGTTGACGTACGGGCC 60.740 66.667 21.06 15.15 0.00 5.80
1977 2007 4.006357 TGGTTGACGTACGGGCCC 62.006 66.667 21.06 13.57 0.00 5.80
1989 2019 3.209812 GGGCCCGGCGAAGAAATC 61.210 66.667 5.69 0.00 0.00 2.17
1990 2020 2.124695 GGCCCGGCGAAGAAATCT 60.125 61.111 9.30 0.00 0.00 2.40
1991 2021 2.472909 GGCCCGGCGAAGAAATCTG 61.473 63.158 9.30 0.00 0.00 2.90
1992 2022 2.472909 GCCCGGCGAAGAAATCTGG 61.473 63.158 9.30 0.00 0.00 3.86
1993 2023 1.078426 CCCGGCGAAGAAATCTGGT 60.078 57.895 9.30 0.00 0.00 4.00
1994 2024 1.369091 CCCGGCGAAGAAATCTGGTG 61.369 60.000 9.30 0.00 0.00 4.17
1995 2025 1.425428 CGGCGAAGAAATCTGGTGC 59.575 57.895 0.00 0.00 0.00 5.01
1996 2026 1.021390 CGGCGAAGAAATCTGGTGCT 61.021 55.000 0.00 0.00 0.00 4.40
1997 2027 1.168714 GGCGAAGAAATCTGGTGCTT 58.831 50.000 0.00 0.00 0.00 3.91
1998 2028 1.135575 GGCGAAGAAATCTGGTGCTTG 60.136 52.381 0.00 0.00 0.00 4.01
1999 2029 1.135575 GCGAAGAAATCTGGTGCTTGG 60.136 52.381 0.00 0.00 0.00 3.61
2000 2030 1.470098 CGAAGAAATCTGGTGCTTGGG 59.530 52.381 0.00 0.00 0.00 4.12
2001 2031 2.795329 GAAGAAATCTGGTGCTTGGGA 58.205 47.619 0.00 0.00 0.00 4.37
2002 2032 2.503895 AGAAATCTGGTGCTTGGGAG 57.496 50.000 0.00 0.00 0.00 4.30
2003 2033 1.005215 AGAAATCTGGTGCTTGGGAGG 59.995 52.381 0.00 0.00 0.00 4.30
2004 2034 0.779997 AAATCTGGTGCTTGGGAGGT 59.220 50.000 0.00 0.00 0.00 3.85
2005 2035 0.779997 AATCTGGTGCTTGGGAGGTT 59.220 50.000 0.00 0.00 0.00 3.50
2006 2036 0.779997 ATCTGGTGCTTGGGAGGTTT 59.220 50.000 0.00 0.00 0.00 3.27
2007 2037 1.440618 TCTGGTGCTTGGGAGGTTTA 58.559 50.000 0.00 0.00 0.00 2.01
2008 2038 1.992557 TCTGGTGCTTGGGAGGTTTAT 59.007 47.619 0.00 0.00 0.00 1.40
2009 2039 3.186283 TCTGGTGCTTGGGAGGTTTATA 58.814 45.455 0.00 0.00 0.00 0.98
2010 2040 3.589735 TCTGGTGCTTGGGAGGTTTATAA 59.410 43.478 0.00 0.00 0.00 0.98
2011 2041 3.947834 CTGGTGCTTGGGAGGTTTATAAG 59.052 47.826 0.00 0.00 0.00 1.73
2012 2042 3.288092 GGTGCTTGGGAGGTTTATAAGG 58.712 50.000 0.00 0.00 0.00 2.69
2013 2043 3.053917 GGTGCTTGGGAGGTTTATAAGGA 60.054 47.826 0.00 0.00 0.00 3.36
2014 2044 4.386424 GGTGCTTGGGAGGTTTATAAGGAT 60.386 45.833 0.00 0.00 0.00 3.24
2015 2045 4.580580 GTGCTTGGGAGGTTTATAAGGATG 59.419 45.833 0.00 0.00 0.00 3.51
2016 2046 4.145052 GCTTGGGAGGTTTATAAGGATGG 58.855 47.826 0.00 0.00 0.00 3.51
2017 2047 4.141251 GCTTGGGAGGTTTATAAGGATGGA 60.141 45.833 0.00 0.00 0.00 3.41
2018 2048 5.377478 CTTGGGAGGTTTATAAGGATGGAC 58.623 45.833 0.00 0.00 0.00 4.02
2019 2049 3.720002 TGGGAGGTTTATAAGGATGGACC 59.280 47.826 0.00 0.00 39.35 4.46
2020 2050 3.244457 GGGAGGTTTATAAGGATGGACCG 60.244 52.174 0.00 0.00 44.74 4.79
2021 2051 3.244457 GGAGGTTTATAAGGATGGACCGG 60.244 52.174 0.00 0.00 44.74 5.28
2022 2052 2.709397 AGGTTTATAAGGATGGACCGGG 59.291 50.000 6.32 0.00 44.74 5.73
2023 2053 2.224695 GGTTTATAAGGATGGACCGGGG 60.225 54.545 6.32 0.00 44.74 5.73
2024 2054 1.737199 TTATAAGGATGGACCGGGGG 58.263 55.000 6.32 0.00 44.74 5.40
2025 2055 0.838987 TATAAGGATGGACCGGGGGC 60.839 60.000 6.32 0.00 44.74 5.80
2043 2073 4.927782 GGCGGATGCATGGCGGTA 62.928 66.667 2.46 0.00 45.35 4.02
2044 2074 3.349006 GCGGATGCATGGCGGTAG 61.349 66.667 2.46 0.00 42.15 3.18
2045 2075 2.666190 CGGATGCATGGCGGTAGG 60.666 66.667 2.46 0.00 0.00 3.18
2046 2076 2.980233 GGATGCATGGCGGTAGGC 60.980 66.667 2.46 0.00 44.11 3.93
2054 2084 3.224324 GGCGGTAGGCGGAGATGA 61.224 66.667 0.00 0.00 44.92 2.92
2055 2085 2.336809 GCGGTAGGCGGAGATGAG 59.663 66.667 0.00 0.00 0.00 2.90
2056 2086 3.043419 CGGTAGGCGGAGATGAGG 58.957 66.667 0.00 0.00 0.00 3.86
2057 2087 2.565645 CGGTAGGCGGAGATGAGGG 61.566 68.421 0.00 0.00 0.00 4.30
2058 2088 2.210711 GGTAGGCGGAGATGAGGGG 61.211 68.421 0.00 0.00 0.00 4.79
2059 2089 1.152525 GTAGGCGGAGATGAGGGGA 60.153 63.158 0.00 0.00 0.00 4.81
2060 2090 1.153989 TAGGCGGAGATGAGGGGAG 59.846 63.158 0.00 0.00 0.00 4.30
2061 2091 2.373338 TAGGCGGAGATGAGGGGAGG 62.373 65.000 0.00 0.00 0.00 4.30
2062 2092 3.237741 GCGGAGATGAGGGGAGGG 61.238 72.222 0.00 0.00 0.00 4.30
2063 2093 3.237741 CGGAGATGAGGGGAGGGC 61.238 72.222 0.00 0.00 0.00 5.19
2064 2094 3.237741 GGAGATGAGGGGAGGGCG 61.238 72.222 0.00 0.00 0.00 6.13
2065 2095 3.237741 GAGATGAGGGGAGGGCGG 61.238 72.222 0.00 0.00 0.00 6.13
2066 2096 4.888325 AGATGAGGGGAGGGCGGG 62.888 72.222 0.00 0.00 0.00 6.13
2086 2116 4.154347 GGAGAGGCTGGCGTGGAG 62.154 72.222 0.00 0.00 0.00 3.86
2106 2136 4.033776 CCACTGCCCACGGGTGAT 62.034 66.667 3.54 0.00 37.65 3.06
2107 2137 2.747460 CACTGCCCACGGGTGATG 60.747 66.667 3.54 0.00 37.65 3.07
2108 2138 4.033776 ACTGCCCACGGGTGATGG 62.034 66.667 3.54 0.00 37.65 3.51
2109 2139 3.716195 CTGCCCACGGGTGATGGA 61.716 66.667 3.54 0.00 39.87 3.41
2110 2140 3.687321 CTGCCCACGGGTGATGGAG 62.687 68.421 3.54 0.00 39.87 3.86
2111 2141 4.489771 GCCCACGGGTGATGGAGG 62.490 72.222 3.54 0.00 39.87 4.30
2112 2142 4.489771 CCCACGGGTGATGGAGGC 62.490 72.222 0.00 0.00 39.87 4.70
2113 2143 3.716195 CCACGGGTGATGGAGGCA 61.716 66.667 0.00 0.00 39.87 4.75
2114 2144 2.436646 CACGGGTGATGGAGGCAC 60.437 66.667 0.00 0.00 35.56 5.01
2115 2145 4.082523 ACGGGTGATGGAGGCACG 62.083 66.667 0.00 0.00 37.13 5.34
2117 2147 4.408821 GGGTGATGGAGGCACGCA 62.409 66.667 0.00 0.00 45.28 5.24
2118 2148 2.821366 GGTGATGGAGGCACGCAG 60.821 66.667 0.00 0.00 37.13 5.18
2119 2149 2.265739 GTGATGGAGGCACGCAGA 59.734 61.111 0.00 0.00 0.00 4.26
2120 2150 1.153289 GTGATGGAGGCACGCAGAT 60.153 57.895 0.00 0.00 0.00 2.90
2121 2151 1.144716 TGATGGAGGCACGCAGATC 59.855 57.895 0.00 0.00 0.00 2.75
2122 2152 1.953138 GATGGAGGCACGCAGATCG 60.953 63.158 0.00 0.00 45.38 3.69
2123 2153 3.451556 ATGGAGGCACGCAGATCGG 62.452 63.158 0.00 0.00 43.86 4.18
2124 2154 3.838271 GGAGGCACGCAGATCGGA 61.838 66.667 0.00 0.00 43.86 4.55
2125 2155 2.583593 GAGGCACGCAGATCGGAC 60.584 66.667 0.00 0.00 43.86 4.79
2126 2156 4.498520 AGGCACGCAGATCGGACG 62.499 66.667 0.00 2.68 43.86 4.79
2128 2158 4.796231 GCACGCAGATCGGACGGT 62.796 66.667 12.36 0.00 43.86 4.83
2129 2159 2.880879 CACGCAGATCGGACGGTG 60.881 66.667 12.36 6.29 43.86 4.94
2130 2160 4.129737 ACGCAGATCGGACGGTGG 62.130 66.667 12.36 0.00 43.86 4.61
2131 2161 4.129737 CGCAGATCGGACGGTGGT 62.130 66.667 0.00 0.00 33.78 4.16
2132 2162 2.202756 GCAGATCGGACGGTGGTC 60.203 66.667 0.00 0.00 42.66 4.02
2133 2163 2.102357 CAGATCGGACGGTGGTCG 59.898 66.667 0.00 0.00 44.39 4.79
2142 2172 4.619227 CGGTGGTCGTGGCAGGTT 62.619 66.667 7.12 0.00 0.00 3.50
2143 2173 2.668550 GGTGGTCGTGGCAGGTTC 60.669 66.667 7.12 2.29 0.00 3.62
2144 2174 2.110213 GTGGTCGTGGCAGGTTCA 59.890 61.111 7.12 4.35 0.00 3.18
2145 2175 1.961277 GTGGTCGTGGCAGGTTCAG 60.961 63.158 7.12 0.00 0.00 3.02
2146 2176 2.137528 TGGTCGTGGCAGGTTCAGA 61.138 57.895 7.12 0.00 0.00 3.27
2147 2177 1.296715 GGTCGTGGCAGGTTCAGAT 59.703 57.895 7.12 0.00 0.00 2.90
2148 2178 0.741221 GGTCGTGGCAGGTTCAGATC 60.741 60.000 7.12 0.00 0.00 2.75
2149 2179 1.078759 GTCGTGGCAGGTTCAGATCG 61.079 60.000 7.12 0.00 0.00 3.69
2150 2180 1.079819 CGTGGCAGGTTCAGATCGT 60.080 57.895 0.00 0.00 0.00 3.73
2151 2181 0.670546 CGTGGCAGGTTCAGATCGTT 60.671 55.000 0.00 0.00 0.00 3.85
2152 2182 0.798776 GTGGCAGGTTCAGATCGTTG 59.201 55.000 0.00 0.00 0.00 4.10
2153 2183 0.321564 TGGCAGGTTCAGATCGTTGG 60.322 55.000 0.00 0.00 0.00 3.77
2154 2184 1.026718 GGCAGGTTCAGATCGTTGGG 61.027 60.000 0.00 0.00 0.00 4.12
2155 2185 1.026718 GCAGGTTCAGATCGTTGGGG 61.027 60.000 0.00 0.00 0.00 4.96
2156 2186 0.613260 CAGGTTCAGATCGTTGGGGA 59.387 55.000 0.00 0.00 0.00 4.81
2157 2187 1.003118 CAGGTTCAGATCGTTGGGGAA 59.997 52.381 0.00 0.00 0.00 3.97
2158 2188 1.279271 AGGTTCAGATCGTTGGGGAAG 59.721 52.381 0.00 0.00 0.00 3.46
2159 2189 1.278127 GGTTCAGATCGTTGGGGAAGA 59.722 52.381 0.00 0.00 0.00 2.87
2160 2190 2.347731 GTTCAGATCGTTGGGGAAGAC 58.652 52.381 0.00 0.00 0.00 3.01
2161 2191 0.530744 TCAGATCGTTGGGGAAGACG 59.469 55.000 0.00 0.00 40.43 4.18
2166 2196 2.660189 TCGTTGGGGAAGACGATTAC 57.340 50.000 0.00 0.00 42.67 1.89
2167 2197 1.135315 TCGTTGGGGAAGACGATTACG 60.135 52.381 0.00 0.00 42.67 3.18
2168 2198 1.135315 CGTTGGGGAAGACGATTACGA 60.135 52.381 0.00 0.00 41.53 3.43
2169 2199 2.480759 CGTTGGGGAAGACGATTACGAT 60.481 50.000 0.00 0.00 41.53 3.73
2170 2200 2.864343 GTTGGGGAAGACGATTACGATG 59.136 50.000 0.00 0.00 42.66 3.84
2171 2201 2.380941 TGGGGAAGACGATTACGATGA 58.619 47.619 0.00 0.00 42.66 2.92
2172 2202 2.963101 TGGGGAAGACGATTACGATGAT 59.037 45.455 0.00 0.00 42.66 2.45
2173 2203 3.386726 TGGGGAAGACGATTACGATGATT 59.613 43.478 0.00 0.00 42.66 2.57
2174 2204 4.141801 TGGGGAAGACGATTACGATGATTT 60.142 41.667 0.00 0.00 42.66 2.17
2175 2205 4.211374 GGGGAAGACGATTACGATGATTTG 59.789 45.833 0.00 0.00 42.66 2.32
2176 2206 4.809426 GGGAAGACGATTACGATGATTTGT 59.191 41.667 0.00 0.00 42.66 2.83
2177 2207 5.276868 GGGAAGACGATTACGATGATTTGTG 60.277 44.000 0.00 0.00 42.66 3.33
2178 2208 4.778842 AGACGATTACGATGATTTGTGC 57.221 40.909 0.00 0.00 42.66 4.57
2179 2209 3.242944 AGACGATTACGATGATTTGTGCG 59.757 43.478 0.00 0.00 42.66 5.34
2180 2210 3.183754 ACGATTACGATGATTTGTGCGA 58.816 40.909 0.00 0.00 42.66 5.10
2181 2211 3.242944 ACGATTACGATGATTTGTGCGAG 59.757 43.478 0.00 0.00 42.66 5.03
2182 2212 3.362014 CGATTACGATGATTTGTGCGAGG 60.362 47.826 0.00 0.00 42.66 4.63
2183 2213 2.665649 TACGATGATTTGTGCGAGGT 57.334 45.000 0.00 0.00 0.00 3.85
2184 2214 1.078709 ACGATGATTTGTGCGAGGTG 58.921 50.000 0.00 0.00 0.00 4.00
2185 2215 0.374758 CGATGATTTGTGCGAGGTGG 59.625 55.000 0.00 0.00 0.00 4.61
2186 2216 1.737838 GATGATTTGTGCGAGGTGGA 58.262 50.000 0.00 0.00 0.00 4.02
2187 2217 2.083774 GATGATTTGTGCGAGGTGGAA 58.916 47.619 0.00 0.00 0.00 3.53
2188 2218 1.234821 TGATTTGTGCGAGGTGGAAC 58.765 50.000 0.00 0.00 0.00 3.62
2189 2219 1.234821 GATTTGTGCGAGGTGGAACA 58.765 50.000 0.00 0.00 39.98 3.18
2190 2220 1.606668 GATTTGTGCGAGGTGGAACAA 59.393 47.619 0.00 0.00 44.16 2.83
2191 2221 1.464734 TTTGTGCGAGGTGGAACAAA 58.535 45.000 0.00 0.00 44.16 2.83
2192 2222 1.021202 TTGTGCGAGGTGGAACAAAG 58.979 50.000 0.00 0.00 44.16 2.77
2193 2223 0.107410 TGTGCGAGGTGGAACAAAGT 60.107 50.000 0.00 0.00 44.16 2.66
2194 2224 1.139256 TGTGCGAGGTGGAACAAAGTA 59.861 47.619 0.00 0.00 44.16 2.24
2195 2225 2.215196 GTGCGAGGTGGAACAAAGTAA 58.785 47.619 0.00 0.00 44.16 2.24
2196 2226 2.812011 GTGCGAGGTGGAACAAAGTAAT 59.188 45.455 0.00 0.00 44.16 1.89
2197 2227 3.252458 GTGCGAGGTGGAACAAAGTAATT 59.748 43.478 0.00 0.00 44.16 1.40
2198 2228 3.500680 TGCGAGGTGGAACAAAGTAATTC 59.499 43.478 0.00 0.00 44.16 2.17
2199 2229 3.500680 GCGAGGTGGAACAAAGTAATTCA 59.499 43.478 0.00 0.00 44.16 2.57
2200 2230 4.378459 GCGAGGTGGAACAAAGTAATTCAG 60.378 45.833 0.00 0.00 44.16 3.02
2201 2231 4.154195 CGAGGTGGAACAAAGTAATTCAGG 59.846 45.833 0.00 0.00 44.16 3.86
2202 2232 5.313712 GAGGTGGAACAAAGTAATTCAGGA 58.686 41.667 0.00 0.00 44.16 3.86
2203 2233 5.892348 AGGTGGAACAAAGTAATTCAGGAT 58.108 37.500 0.00 0.00 44.16 3.24
2204 2234 5.946377 AGGTGGAACAAAGTAATTCAGGATC 59.054 40.000 0.00 0.00 44.16 3.36
2205 2235 5.946377 GGTGGAACAAAGTAATTCAGGATCT 59.054 40.000 0.00 0.00 44.16 2.75
2206 2236 7.037586 AGGTGGAACAAAGTAATTCAGGATCTA 60.038 37.037 0.00 0.00 44.16 1.98
2207 2237 7.610305 GGTGGAACAAAGTAATTCAGGATCTAA 59.390 37.037 0.00 0.00 44.16 2.10
2208 2238 8.451748 GTGGAACAAAGTAATTCAGGATCTAAC 58.548 37.037 0.00 0.00 44.16 2.34
2209 2239 7.333423 TGGAACAAAGTAATTCAGGATCTAACG 59.667 37.037 0.00 0.00 31.92 3.18
2210 2240 7.201617 GGAACAAAGTAATTCAGGATCTAACGG 60.202 40.741 0.00 0.00 0.00 4.44
2211 2241 6.708285 ACAAAGTAATTCAGGATCTAACGGT 58.292 36.000 0.00 0.00 0.00 4.83
2212 2242 7.166167 ACAAAGTAATTCAGGATCTAACGGTT 58.834 34.615 0.00 0.00 0.00 4.44
2213 2243 7.333672 ACAAAGTAATTCAGGATCTAACGGTTC 59.666 37.037 0.00 0.00 0.00 3.62
2214 2244 6.793505 AGTAATTCAGGATCTAACGGTTCT 57.206 37.500 0.00 0.00 0.00 3.01
2215 2245 6.574350 AGTAATTCAGGATCTAACGGTTCTG 58.426 40.000 0.00 0.00 0.00 3.02
2216 2246 3.887621 TTCAGGATCTAACGGTTCTGG 57.112 47.619 0.00 0.00 0.00 3.86
2217 2247 3.095912 TCAGGATCTAACGGTTCTGGA 57.904 47.619 0.00 0.00 0.00 3.86
2218 2248 3.437213 TCAGGATCTAACGGTTCTGGAA 58.563 45.455 0.00 0.00 0.00 3.53
2219 2249 3.835978 TCAGGATCTAACGGTTCTGGAAA 59.164 43.478 0.00 0.00 0.00 3.13
2220 2250 4.285003 TCAGGATCTAACGGTTCTGGAAAA 59.715 41.667 0.00 0.00 0.00 2.29
2221 2251 5.045869 TCAGGATCTAACGGTTCTGGAAAAT 60.046 40.000 0.00 0.00 0.00 1.82
2222 2252 5.648092 CAGGATCTAACGGTTCTGGAAAATT 59.352 40.000 0.00 0.00 0.00 1.82
2223 2253 5.880887 AGGATCTAACGGTTCTGGAAAATTC 59.119 40.000 0.00 0.00 0.00 2.17
2224 2254 5.220605 GGATCTAACGGTTCTGGAAAATTCG 60.221 44.000 0.00 0.00 0.00 3.34
2225 2255 4.885413 TCTAACGGTTCTGGAAAATTCGA 58.115 39.130 0.00 0.00 0.00 3.71
2226 2256 5.484715 TCTAACGGTTCTGGAAAATTCGAT 58.515 37.500 0.00 0.00 0.00 3.59
2227 2257 4.680171 AACGGTTCTGGAAAATTCGATC 57.320 40.909 0.00 0.00 0.00 3.69
2228 2258 2.671396 ACGGTTCTGGAAAATTCGATCG 59.329 45.455 9.36 9.36 0.00 3.69
2229 2259 2.927477 CGGTTCTGGAAAATTCGATCGA 59.073 45.455 15.15 15.15 0.00 3.59
2230 2260 3.241995 CGGTTCTGGAAAATTCGATCGAC 60.242 47.826 19.26 5.65 0.00 4.20
2231 2261 3.063588 GGTTCTGGAAAATTCGATCGACC 59.936 47.826 19.26 15.74 0.00 4.79
2232 2262 2.901249 TCTGGAAAATTCGATCGACCC 58.099 47.619 19.26 13.87 0.00 4.46
2233 2263 2.235155 TCTGGAAAATTCGATCGACCCA 59.765 45.455 19.26 17.34 0.00 4.51
2234 2264 3.006940 CTGGAAAATTCGATCGACCCAA 58.993 45.455 19.26 2.99 0.00 4.12
2235 2265 3.413327 TGGAAAATTCGATCGACCCAAA 58.587 40.909 19.26 2.54 0.00 3.28
2236 2266 4.013728 TGGAAAATTCGATCGACCCAAAT 58.986 39.130 19.26 5.25 0.00 2.32
2237 2267 4.095782 TGGAAAATTCGATCGACCCAAATC 59.904 41.667 19.26 11.19 0.00 2.17
2238 2268 4.497507 GGAAAATTCGATCGACCCAAATCC 60.498 45.833 19.26 16.09 0.00 3.01
2239 2269 1.865865 ATTCGATCGACCCAAATCCG 58.134 50.000 19.26 0.00 0.00 4.18
2240 2270 0.533491 TTCGATCGACCCAAATCCGT 59.467 50.000 19.26 0.00 0.00 4.69
2241 2271 0.533491 TCGATCGACCCAAATCCGTT 59.467 50.000 15.15 0.00 0.00 4.44
2242 2272 1.066716 TCGATCGACCCAAATCCGTTT 60.067 47.619 15.15 0.00 0.00 3.60
2243 2273 1.735571 CGATCGACCCAAATCCGTTTT 59.264 47.619 10.26 0.00 0.00 2.43
2244 2274 2.160813 CGATCGACCCAAATCCGTTTTT 59.839 45.455 10.26 0.00 0.00 1.94
2245 2275 3.726782 CGATCGACCCAAATCCGTTTTTC 60.727 47.826 10.26 0.00 0.00 2.29
2246 2276 2.573369 TCGACCCAAATCCGTTTTTCA 58.427 42.857 0.00 0.00 0.00 2.69
2247 2277 2.550606 TCGACCCAAATCCGTTTTTCAG 59.449 45.455 0.00 0.00 0.00 3.02
2248 2278 2.351350 CGACCCAAATCCGTTTTTCAGG 60.351 50.000 0.00 0.00 0.00 3.86
2249 2279 1.343142 ACCCAAATCCGTTTTTCAGGC 59.657 47.619 0.00 0.00 0.00 4.85
2250 2280 1.342819 CCCAAATCCGTTTTTCAGGCA 59.657 47.619 0.00 0.00 0.00 4.75
2251 2281 2.224161 CCCAAATCCGTTTTTCAGGCAA 60.224 45.455 0.00 0.00 0.00 4.52
2252 2282 2.799978 CCAAATCCGTTTTTCAGGCAAC 59.200 45.455 0.00 0.00 0.00 4.17
2267 2297 3.430333 GGCAACTTTGTTCCTCGAAAA 57.570 42.857 0.00 0.00 0.00 2.29
2268 2298 3.977427 GGCAACTTTGTTCCTCGAAAAT 58.023 40.909 0.00 0.00 0.00 1.82
2269 2299 3.735746 GGCAACTTTGTTCCTCGAAAATG 59.264 43.478 0.00 0.00 0.00 2.32
2270 2300 3.182372 GCAACTTTGTTCCTCGAAAATGC 59.818 43.478 0.00 0.00 0.00 3.56
2271 2301 4.610945 CAACTTTGTTCCTCGAAAATGCT 58.389 39.130 0.00 0.00 0.00 3.79
2272 2302 5.757886 CAACTTTGTTCCTCGAAAATGCTA 58.242 37.500 0.00 0.00 0.00 3.49
2273 2303 6.205784 CAACTTTGTTCCTCGAAAATGCTAA 58.794 36.000 0.00 0.00 0.00 3.09
2274 2304 6.385649 ACTTTGTTCCTCGAAAATGCTAAA 57.614 33.333 0.00 0.00 0.00 1.85
2275 2305 6.981722 ACTTTGTTCCTCGAAAATGCTAAAT 58.018 32.000 0.00 0.00 0.00 1.40
2276 2306 6.863126 ACTTTGTTCCTCGAAAATGCTAAATG 59.137 34.615 0.00 0.00 0.00 2.32
2277 2307 4.732784 TGTTCCTCGAAAATGCTAAATGC 58.267 39.130 0.00 0.00 43.25 3.56
2287 2317 2.471255 GCTAAATGCACGAGCCAGT 58.529 52.632 1.39 0.00 42.31 4.00
2288 2318 0.375106 GCTAAATGCACGAGCCAGTC 59.625 55.000 1.39 0.00 42.31 3.51
2296 2326 2.808315 CGAGCCAGTCGTAGCCAT 59.192 61.111 0.00 0.00 44.20 4.40
2297 2327 1.141881 CGAGCCAGTCGTAGCCATT 59.858 57.895 0.00 0.00 44.20 3.16
2298 2328 0.460284 CGAGCCAGTCGTAGCCATTT 60.460 55.000 0.00 0.00 44.20 2.32
2299 2329 1.739067 GAGCCAGTCGTAGCCATTTT 58.261 50.000 0.00 0.00 0.00 1.82
2300 2330 2.737359 CGAGCCAGTCGTAGCCATTTTA 60.737 50.000 0.00 0.00 44.20 1.52
2301 2331 2.608090 GAGCCAGTCGTAGCCATTTTAC 59.392 50.000 0.00 0.00 0.00 2.01
2302 2332 2.027561 AGCCAGTCGTAGCCATTTTACA 60.028 45.455 0.00 0.00 0.00 2.41
2303 2333 2.351726 GCCAGTCGTAGCCATTTTACAG 59.648 50.000 0.00 0.00 0.00 2.74
2304 2334 2.936498 CCAGTCGTAGCCATTTTACAGG 59.064 50.000 0.00 0.00 0.00 4.00
2305 2335 2.936498 CAGTCGTAGCCATTTTACAGGG 59.064 50.000 0.00 0.00 0.00 4.45
2306 2336 2.570302 AGTCGTAGCCATTTTACAGGGT 59.430 45.455 0.00 0.00 39.33 4.34
2307 2337 2.934553 GTCGTAGCCATTTTACAGGGTC 59.065 50.000 0.00 0.00 36.86 4.46
2308 2338 2.093341 TCGTAGCCATTTTACAGGGTCC 60.093 50.000 0.00 0.00 36.86 4.46
2309 2339 2.093128 CGTAGCCATTTTACAGGGTCCT 60.093 50.000 0.00 0.00 36.86 3.85
2310 2340 3.621461 CGTAGCCATTTTACAGGGTCCTT 60.621 47.826 0.00 0.00 36.86 3.36
2311 2341 3.087370 AGCCATTTTACAGGGTCCTTC 57.913 47.619 0.00 0.00 0.00 3.46
2312 2342 2.100197 GCCATTTTACAGGGTCCTTCC 58.900 52.381 0.00 0.00 0.00 3.46
2313 2343 2.291605 GCCATTTTACAGGGTCCTTCCT 60.292 50.000 0.00 0.00 37.71 3.36
2314 2344 3.621558 CCATTTTACAGGGTCCTTCCTC 58.378 50.000 0.00 0.00 34.31 3.71
2315 2345 3.267031 CCATTTTACAGGGTCCTTCCTCT 59.733 47.826 0.00 0.00 34.31 3.69
2316 2346 4.473559 CCATTTTACAGGGTCCTTCCTCTA 59.526 45.833 0.00 0.00 34.31 2.43
2317 2347 5.045140 CCATTTTACAGGGTCCTTCCTCTAA 60.045 44.000 0.00 0.00 34.31 2.10
2318 2348 5.757099 TTTTACAGGGTCCTTCCTCTAAG 57.243 43.478 0.00 0.00 34.31 2.18
2329 2359 4.487714 CTTCCTCTAAGGGCATGTACAA 57.512 45.455 0.00 0.00 35.59 2.41
2330 2360 5.041191 CTTCCTCTAAGGGCATGTACAAT 57.959 43.478 0.00 0.00 35.59 2.71
2331 2361 4.422073 TCCTCTAAGGGCATGTACAATG 57.578 45.455 0.00 0.12 35.59 2.82
2332 2362 3.136443 TCCTCTAAGGGCATGTACAATGG 59.864 47.826 0.00 0.00 35.59 3.16
2333 2363 3.117888 CCTCTAAGGGCATGTACAATGGT 60.118 47.826 0.00 0.00 0.00 3.55
2334 2364 4.526970 CTCTAAGGGCATGTACAATGGTT 58.473 43.478 0.00 0.00 0.00 3.67
2335 2365 4.269183 TCTAAGGGCATGTACAATGGTTG 58.731 43.478 0.00 0.00 0.00 3.77
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
56 57 8.743714 GGGATGAATTCAACAAAGTTAATCTCT 58.256 33.333 13.09 0.00 0.00 3.10
104 105 9.871238 TCTTAGAAAGTAGGAACATTGACATAC 57.129 33.333 0.00 0.00 0.00 2.39
288 289 3.320826 ACTTCCACCACCATTTTGCTAAC 59.679 43.478 0.00 0.00 0.00 2.34
430 431 8.105829 CCTTCCAGCCATATACATCTCTTTTAT 58.894 37.037 0.00 0.00 0.00 1.40
594 596 5.060662 TGAATATATCTCCACTAGCACGC 57.939 43.478 0.00 0.00 0.00 5.34
860 862 6.867519 TCATAACATCCCTAGTCAGAACAA 57.132 37.500 0.00 0.00 0.00 2.83
1138 1140 7.154656 GCCATTTTCTTGAATTCAAAGGTAGT 58.845 34.615 20.82 4.46 35.15 2.73
1166 1168 4.627467 CGTTGAAGACAATCTCGAAAGGAT 59.373 41.667 0.00 0.00 38.32 3.24
1246 1248 2.482796 ATCACCGCACCATGCTCCAA 62.483 55.000 0.00 0.00 42.25 3.53
1253 1255 1.679944 CCTTCAGAATCACCGCACCAT 60.680 52.381 0.00 0.00 0.00 3.55
1530 1557 1.210931 CGAAACGCCCACTACGAGA 59.789 57.895 0.00 0.00 0.00 4.04
1574 1601 1.274728 AGCGAGATCAAGCACTTCAGT 59.725 47.619 13.63 0.00 35.48 3.41
1682 1712 0.518636 CACACAGCCAGTACATGCAC 59.481 55.000 9.01 0.00 0.00 4.57
1694 1724 2.111878 ACTCCCACAGCACACAGC 59.888 61.111 0.00 0.00 46.19 4.40
1695 1725 1.598962 CCACTCCCACAGCACACAG 60.599 63.158 0.00 0.00 0.00 3.66
1696 1726 2.510411 CCACTCCCACAGCACACA 59.490 61.111 0.00 0.00 0.00 3.72
1697 1727 2.281761 CCCACTCCCACAGCACAC 60.282 66.667 0.00 0.00 0.00 3.82
1698 1728 2.447572 TCCCACTCCCACAGCACA 60.448 61.111 0.00 0.00 0.00 4.57
1699 1729 2.032681 GTCCCACTCCCACAGCAC 59.967 66.667 0.00 0.00 0.00 4.40
1700 1730 2.122413 AGTCCCACTCCCACAGCA 60.122 61.111 0.00 0.00 0.00 4.41
1701 1731 1.484444 AAGAGTCCCACTCCCACAGC 61.484 60.000 0.00 0.00 46.18 4.40
1702 1732 0.322975 CAAGAGTCCCACTCCCACAG 59.677 60.000 0.00 0.00 46.18 3.66
1703 1733 0.105194 TCAAGAGTCCCACTCCCACA 60.105 55.000 0.00 0.00 46.18 4.17
1704 1734 0.321996 GTCAAGAGTCCCACTCCCAC 59.678 60.000 0.00 0.00 46.18 4.61
1705 1735 1.185618 CGTCAAGAGTCCCACTCCCA 61.186 60.000 0.00 0.00 46.18 4.37
1706 1736 1.592223 CGTCAAGAGTCCCACTCCC 59.408 63.158 0.00 0.00 46.18 4.30
1707 1737 1.079750 GCGTCAAGAGTCCCACTCC 60.080 63.158 0.00 0.00 46.18 3.85
1708 1738 0.033504 TTGCGTCAAGAGTCCCACTC 59.966 55.000 0.00 0.00 45.38 3.51
1709 1739 0.034059 CTTGCGTCAAGAGTCCCACT 59.966 55.000 12.43 0.00 43.42 4.00
1710 1740 0.249911 ACTTGCGTCAAGAGTCCCAC 60.250 55.000 21.19 0.00 43.42 4.61
1711 1741 0.468226 AACTTGCGTCAAGAGTCCCA 59.532 50.000 21.19 0.00 43.42 4.37
1712 1742 2.338500 CTAACTTGCGTCAAGAGTCCC 58.662 52.381 21.19 0.00 43.42 4.46
1713 1743 1.727335 GCTAACTTGCGTCAAGAGTCC 59.273 52.381 21.19 7.51 43.42 3.85
1714 1744 2.404215 TGCTAACTTGCGTCAAGAGTC 58.596 47.619 21.19 10.55 43.42 3.36
1715 1745 2.526304 TGCTAACTTGCGTCAAGAGT 57.474 45.000 21.19 12.99 43.42 3.24
1716 1746 2.738846 ACATGCTAACTTGCGTCAAGAG 59.261 45.455 21.19 12.59 43.42 2.85
1717 1747 2.736721 GACATGCTAACTTGCGTCAAGA 59.263 45.455 21.19 4.21 43.42 3.02
1718 1748 2.738846 AGACATGCTAACTTGCGTCAAG 59.261 45.455 15.16 15.16 45.85 3.02
1719 1749 2.480037 CAGACATGCTAACTTGCGTCAA 59.520 45.455 0.00 0.00 35.36 3.18
1720 1750 2.068519 CAGACATGCTAACTTGCGTCA 58.931 47.619 0.00 0.00 35.36 4.35
1721 1751 2.069273 ACAGACATGCTAACTTGCGTC 58.931 47.619 0.00 0.00 35.36 5.19
1722 1752 2.169832 ACAGACATGCTAACTTGCGT 57.830 45.000 0.00 0.00 35.36 5.24
1723 1753 4.864916 ATAACAGACATGCTAACTTGCG 57.135 40.909 0.00 0.00 35.36 4.85
1724 1754 7.308782 AGTTATAACAGACATGCTAACTTGC 57.691 36.000 17.65 0.00 30.96 4.01
1752 1782 8.126700 CGACAAAGTTTATAACACTCAAGGTTT 58.873 33.333 0.00 0.00 0.00 3.27
1753 1783 7.636326 CGACAAAGTTTATAACACTCAAGGTT 58.364 34.615 0.00 0.00 0.00 3.50
1754 1784 6.293244 GCGACAAAGTTTATAACACTCAAGGT 60.293 38.462 0.00 0.00 0.00 3.50
1755 1785 6.077838 GCGACAAAGTTTATAACACTCAAGG 58.922 40.000 0.00 0.00 0.00 3.61
1756 1786 6.655062 TGCGACAAAGTTTATAACACTCAAG 58.345 36.000 0.00 0.00 0.00 3.02
1757 1787 6.606234 TGCGACAAAGTTTATAACACTCAA 57.394 33.333 0.00 0.00 0.00 3.02
1758 1788 6.606234 TTGCGACAAAGTTTATAACACTCA 57.394 33.333 0.00 0.00 0.00 3.41
1759 1789 8.440833 ACTATTGCGACAAAGTTTATAACACTC 58.559 33.333 0.00 0.00 0.00 3.51
1760 1790 8.319143 ACTATTGCGACAAAGTTTATAACACT 57.681 30.769 0.00 0.00 0.00 3.55
1761 1791 8.944212 AACTATTGCGACAAAGTTTATAACAC 57.056 30.769 0.00 0.00 0.00 3.32
1793 1823 9.824534 GACACAAAATCAAAATTCAAACAACTT 57.175 25.926 0.00 0.00 0.00 2.66
1794 1824 8.997323 TGACACAAAATCAAAATTCAAACAACT 58.003 25.926 0.00 0.00 0.00 3.16
1795 1825 9.264782 CTGACACAAAATCAAAATTCAAACAAC 57.735 29.630 0.00 0.00 0.00 3.32
1796 1826 8.997323 ACTGACACAAAATCAAAATTCAAACAA 58.003 25.926 0.00 0.00 0.00 2.83
1797 1827 8.545229 ACTGACACAAAATCAAAATTCAAACA 57.455 26.923 0.00 0.00 0.00 2.83
1798 1828 8.655092 TGACTGACACAAAATCAAAATTCAAAC 58.345 29.630 0.00 0.00 0.00 2.93
1799 1829 8.768957 TGACTGACACAAAATCAAAATTCAAA 57.231 26.923 0.00 0.00 0.00 2.69
1800 1830 8.768957 TTGACTGACACAAAATCAAAATTCAA 57.231 26.923 0.00 0.00 0.00 2.69
1801 1831 8.819015 CATTGACTGACACAAAATCAAAATTCA 58.181 29.630 0.00 0.00 33.29 2.57
1802 1832 8.819974 ACATTGACTGACACAAAATCAAAATTC 58.180 29.630 0.00 0.00 33.29 2.17
1803 1833 8.605746 CACATTGACTGACACAAAATCAAAATT 58.394 29.630 0.00 0.00 33.29 1.82
1804 1834 7.765360 ACACATTGACTGACACAAAATCAAAAT 59.235 29.630 0.00 0.00 33.29 1.82
1805 1835 7.063191 CACACATTGACTGACACAAAATCAAAA 59.937 33.333 0.00 0.00 33.29 2.44
1806 1836 6.530887 CACACATTGACTGACACAAAATCAAA 59.469 34.615 0.00 0.00 33.29 2.69
1807 1837 6.035217 CACACATTGACTGACACAAAATCAA 58.965 36.000 0.00 0.00 34.03 2.57
1808 1838 5.450274 CCACACATTGACTGACACAAAATCA 60.450 40.000 0.00 0.00 0.00 2.57
1809 1839 4.977963 CCACACATTGACTGACACAAAATC 59.022 41.667 0.00 0.00 0.00 2.17
1810 1840 4.737352 GCCACACATTGACTGACACAAAAT 60.737 41.667 0.00 0.00 0.00 1.82
1811 1841 3.428725 GCCACACATTGACTGACACAAAA 60.429 43.478 0.00 0.00 0.00 2.44
1812 1842 2.098934 GCCACACATTGACTGACACAAA 59.901 45.455 0.00 0.00 0.00 2.83
1813 1843 1.675483 GCCACACATTGACTGACACAA 59.325 47.619 0.00 0.00 0.00 3.33
1814 1844 1.308047 GCCACACATTGACTGACACA 58.692 50.000 0.00 0.00 0.00 3.72
1815 1845 1.308047 TGCCACACATTGACTGACAC 58.692 50.000 0.00 0.00 0.00 3.67
1816 1846 2.049888 TTGCCACACATTGACTGACA 57.950 45.000 0.00 0.00 0.00 3.58
1817 1847 3.435105 TTTTGCCACACATTGACTGAC 57.565 42.857 0.00 0.00 0.00 3.51
1818 1848 3.698539 TCTTTTTGCCACACATTGACTGA 59.301 39.130 0.00 0.00 0.00 3.41
1819 1849 4.044336 TCTTTTTGCCACACATTGACTG 57.956 40.909 0.00 0.00 0.00 3.51
1820 1850 4.441913 CCTTCTTTTTGCCACACATTGACT 60.442 41.667 0.00 0.00 0.00 3.41
1821 1851 3.803778 CCTTCTTTTTGCCACACATTGAC 59.196 43.478 0.00 0.00 0.00 3.18
1822 1852 3.181467 CCCTTCTTTTTGCCACACATTGA 60.181 43.478 0.00 0.00 0.00 2.57
1823 1853 3.132925 CCCTTCTTTTTGCCACACATTG 58.867 45.455 0.00 0.00 0.00 2.82
1824 1854 2.104622 CCCCTTCTTTTTGCCACACATT 59.895 45.455 0.00 0.00 0.00 2.71
1825 1855 1.693606 CCCCTTCTTTTTGCCACACAT 59.306 47.619 0.00 0.00 0.00 3.21
1826 1856 1.118838 CCCCTTCTTTTTGCCACACA 58.881 50.000 0.00 0.00 0.00 3.72
1827 1857 0.392706 CCCCCTTCTTTTTGCCACAC 59.607 55.000 0.00 0.00 0.00 3.82
1828 1858 0.263172 TCCCCCTTCTTTTTGCCACA 59.737 50.000 0.00 0.00 0.00 4.17
1829 1859 1.419381 TTCCCCCTTCTTTTTGCCAC 58.581 50.000 0.00 0.00 0.00 5.01
1830 1860 2.182516 TTTCCCCCTTCTTTTTGCCA 57.817 45.000 0.00 0.00 0.00 4.92
1831 1861 2.637382 TCATTTCCCCCTTCTTTTTGCC 59.363 45.455 0.00 0.00 0.00 4.52
1832 1862 3.306989 CCTCATTTCCCCCTTCTTTTTGC 60.307 47.826 0.00 0.00 0.00 3.68
1833 1863 3.306989 GCCTCATTTCCCCCTTCTTTTTG 60.307 47.826 0.00 0.00 0.00 2.44
1834 1864 2.906389 GCCTCATTTCCCCCTTCTTTTT 59.094 45.455 0.00 0.00 0.00 1.94
1835 1865 2.540383 GCCTCATTTCCCCCTTCTTTT 58.460 47.619 0.00 0.00 0.00 2.27
1836 1866 1.616994 CGCCTCATTTCCCCCTTCTTT 60.617 52.381 0.00 0.00 0.00 2.52
1837 1867 0.034089 CGCCTCATTTCCCCCTTCTT 60.034 55.000 0.00 0.00 0.00 2.52
1838 1868 1.609783 CGCCTCATTTCCCCCTTCT 59.390 57.895 0.00 0.00 0.00 2.85
1839 1869 2.121538 GCGCCTCATTTCCCCCTTC 61.122 63.158 0.00 0.00 0.00 3.46
1840 1870 2.043953 GCGCCTCATTTCCCCCTT 60.044 61.111 0.00 0.00 0.00 3.95
1841 1871 2.631012 GATGCGCCTCATTTCCCCCT 62.631 60.000 4.18 0.00 35.05 4.79
1842 1872 2.123726 ATGCGCCTCATTTCCCCC 60.124 61.111 4.18 0.00 29.16 5.40
1843 1873 1.453745 TGATGCGCCTCATTTCCCC 60.454 57.895 11.59 0.00 35.05 4.81
1844 1874 1.728490 GGTGATGCGCCTCATTTCCC 61.728 60.000 18.45 10.99 35.05 3.97
1845 1875 1.031571 TGGTGATGCGCCTCATTTCC 61.032 55.000 18.45 14.87 35.05 3.13
1846 1876 0.810648 TTGGTGATGCGCCTCATTTC 59.189 50.000 18.45 11.53 35.05 2.17
1847 1877 0.813184 CTTGGTGATGCGCCTCATTT 59.187 50.000 18.45 0.00 35.05 2.32
1848 1878 1.033746 CCTTGGTGATGCGCCTCATT 61.034 55.000 18.45 0.00 35.05 2.57
1849 1879 1.452651 CCTTGGTGATGCGCCTCAT 60.453 57.895 18.45 0.00 38.32 2.90
1850 1880 2.046023 CCTTGGTGATGCGCCTCA 60.046 61.111 11.59 11.59 34.70 3.86
1851 1881 3.512516 GCCTTGGTGATGCGCCTC 61.513 66.667 4.18 5.02 34.70 4.70
1852 1882 4.039092 AGCCTTGGTGATGCGCCT 62.039 61.111 4.18 0.00 34.70 5.52
1853 1883 3.818787 CAGCCTTGGTGATGCGCC 61.819 66.667 4.18 0.00 32.22 6.53
1854 1884 4.487412 GCAGCCTTGGTGATGCGC 62.487 66.667 0.00 0.00 32.22 6.09
1855 1885 3.047718 CTGCAGCCTTGGTGATGCG 62.048 63.158 0.00 0.00 41.58 4.73
1856 1886 1.035932 ATCTGCAGCCTTGGTGATGC 61.036 55.000 9.47 0.00 39.14 3.91
1857 1887 0.738975 CATCTGCAGCCTTGGTGATG 59.261 55.000 9.47 1.06 32.22 3.07
1858 1888 0.395311 CCATCTGCAGCCTTGGTGAT 60.395 55.000 9.47 0.00 32.22 3.06
1859 1889 1.001764 CCATCTGCAGCCTTGGTGA 60.002 57.895 9.47 0.00 32.22 4.02
1860 1890 2.707849 GCCATCTGCAGCCTTGGTG 61.708 63.158 22.94 4.50 40.77 4.17
1861 1891 2.362120 GCCATCTGCAGCCTTGGT 60.362 61.111 22.94 0.00 40.77 3.67
1862 1892 3.145551 GGCCATCTGCAGCCTTGG 61.146 66.667 19.89 19.89 46.14 3.61
1880 1910 3.643978 CTATGCTTGCCTCGGCGC 61.644 66.667 0.00 0.00 45.51 6.53
1881 1911 3.643978 GCTATGCTTGCCTCGGCG 61.644 66.667 0.00 0.00 45.51 6.46
1882 1912 2.056481 CTTGCTATGCTTGCCTCGGC 62.056 60.000 0.00 0.00 42.35 5.54
1883 1913 1.442526 CCTTGCTATGCTTGCCTCGG 61.443 60.000 0.00 0.00 0.00 4.63
1884 1914 0.462581 TCCTTGCTATGCTTGCCTCG 60.463 55.000 0.00 0.00 0.00 4.63
1885 1915 1.020437 GTCCTTGCTATGCTTGCCTC 58.980 55.000 0.00 0.00 0.00 4.70
1886 1916 0.394899 GGTCCTTGCTATGCTTGCCT 60.395 55.000 0.00 0.00 0.00 4.75
1887 1917 0.680921 TGGTCCTTGCTATGCTTGCC 60.681 55.000 0.00 0.00 0.00 4.52
1888 1918 0.737219 CTGGTCCTTGCTATGCTTGC 59.263 55.000 0.00 0.00 0.00 4.01
1889 1919 1.386533 CCTGGTCCTTGCTATGCTTG 58.613 55.000 0.00 0.00 0.00 4.01
1890 1920 0.257039 CCCTGGTCCTTGCTATGCTT 59.743 55.000 0.00 0.00 0.00 3.91
1891 1921 0.621571 TCCCTGGTCCTTGCTATGCT 60.622 55.000 0.00 0.00 0.00 3.79
1892 1922 0.475906 ATCCCTGGTCCTTGCTATGC 59.524 55.000 0.00 0.00 0.00 3.14
1893 1923 1.816961 GCATCCCTGGTCCTTGCTATG 60.817 57.143 0.00 0.00 0.00 2.23
1894 1924 0.475906 GCATCCCTGGTCCTTGCTAT 59.524 55.000 0.00 0.00 0.00 2.97
1895 1925 1.635817 GGCATCCCTGGTCCTTGCTA 61.636 60.000 0.00 0.00 33.86 3.49
1896 1926 2.679716 GCATCCCTGGTCCTTGCT 59.320 61.111 0.00 0.00 0.00 3.91
1897 1927 2.440980 GGCATCCCTGGTCCTTGC 60.441 66.667 0.00 0.00 0.00 4.01
1898 1928 2.124570 CGGCATCCCTGGTCCTTG 60.125 66.667 0.00 0.00 0.00 3.61
1899 1929 3.411517 CCGGCATCCCTGGTCCTT 61.412 66.667 0.00 0.00 0.00 3.36
1902 1932 4.424711 TTGCCGGCATCCCTGGTC 62.425 66.667 33.25 0.00 0.00 4.02
1903 1933 4.431131 CTTGCCGGCATCCCTGGT 62.431 66.667 33.25 0.00 0.00 4.00
1930 1960 1.447314 CCACTTACGGCTCGTTCCC 60.447 63.158 5.57 0.00 41.54 3.97
1931 1961 0.458025 CTCCACTTACGGCTCGTTCC 60.458 60.000 5.57 0.00 41.54 3.62
1932 1962 0.458025 CCTCCACTTACGGCTCGTTC 60.458 60.000 5.57 0.00 41.54 3.95
1933 1963 1.590147 CCTCCACTTACGGCTCGTT 59.410 57.895 5.57 0.00 41.54 3.85
1934 1964 3.003113 GCCTCCACTTACGGCTCGT 62.003 63.158 5.58 5.58 44.35 4.18
1935 1965 2.202756 GCCTCCACTTACGGCTCG 60.203 66.667 0.00 0.00 40.62 5.03
1938 1968 1.337387 CTAGTAGCCTCCACTTACGGC 59.663 57.143 0.00 0.00 44.09 5.68
1939 1969 1.955080 CCTAGTAGCCTCCACTTACGG 59.045 57.143 0.00 0.00 0.00 4.02
1940 1970 2.358267 CACCTAGTAGCCTCCACTTACG 59.642 54.545 0.00 0.00 0.00 3.18
1941 1971 2.694109 CCACCTAGTAGCCTCCACTTAC 59.306 54.545 0.00 0.00 0.00 2.34
1942 1972 2.313945 ACCACCTAGTAGCCTCCACTTA 59.686 50.000 0.00 0.00 0.00 2.24
1943 1973 1.078989 ACCACCTAGTAGCCTCCACTT 59.921 52.381 0.00 0.00 0.00 3.16
1944 1974 0.711184 ACCACCTAGTAGCCTCCACT 59.289 55.000 0.00 0.00 0.00 4.00
1945 1975 1.207329 CAACCACCTAGTAGCCTCCAC 59.793 57.143 0.00 0.00 0.00 4.02
1946 1976 1.078159 TCAACCACCTAGTAGCCTCCA 59.922 52.381 0.00 0.00 0.00 3.86
1947 1977 1.481363 GTCAACCACCTAGTAGCCTCC 59.519 57.143 0.00 0.00 0.00 4.30
1948 1978 1.134560 CGTCAACCACCTAGTAGCCTC 59.865 57.143 0.00 0.00 0.00 4.70
1949 1979 1.183549 CGTCAACCACCTAGTAGCCT 58.816 55.000 0.00 0.00 0.00 4.58
1950 1980 0.893447 ACGTCAACCACCTAGTAGCC 59.107 55.000 0.00 0.00 0.00 3.93
1951 1981 2.476854 CGTACGTCAACCACCTAGTAGC 60.477 54.545 7.22 0.00 0.00 3.58
1952 1982 2.096496 CCGTACGTCAACCACCTAGTAG 59.904 54.545 15.21 0.00 0.00 2.57
1953 1983 2.083774 CCGTACGTCAACCACCTAGTA 58.916 52.381 15.21 0.00 0.00 1.82
1954 1984 0.883833 CCGTACGTCAACCACCTAGT 59.116 55.000 15.21 0.00 0.00 2.57
1955 1985 0.171903 CCCGTACGTCAACCACCTAG 59.828 60.000 15.21 0.00 0.00 3.02
1956 1986 1.876497 GCCCGTACGTCAACCACCTA 61.876 60.000 15.21 0.00 0.00 3.08
1957 1987 3.053828 CCCGTACGTCAACCACCT 58.946 61.111 15.21 0.00 0.00 4.00
1958 1988 2.739671 GCCCGTACGTCAACCACC 60.740 66.667 15.21 0.00 0.00 4.61
1959 1989 2.739671 GGCCCGTACGTCAACCAC 60.740 66.667 15.21 0.00 0.00 4.16
1960 1990 4.006357 GGGCCCGTACGTCAACCA 62.006 66.667 5.69 0.00 0.00 3.67
1972 2002 3.209812 GATTTCTTCGCCGGGCCC 61.210 66.667 13.57 13.57 0.00 5.80
1973 2003 2.124695 AGATTTCTTCGCCGGGCC 60.125 61.111 14.55 0.00 0.00 5.80
1974 2004 2.472909 CCAGATTTCTTCGCCGGGC 61.473 63.158 9.54 9.54 0.00 6.13
1975 2005 1.078426 ACCAGATTTCTTCGCCGGG 60.078 57.895 2.18 0.00 0.00 5.73
1976 2006 1.982073 GCACCAGATTTCTTCGCCGG 61.982 60.000 0.00 0.00 0.00 6.13
1977 2007 1.021390 AGCACCAGATTTCTTCGCCG 61.021 55.000 0.00 0.00 0.00 6.46
1978 2008 1.135575 CAAGCACCAGATTTCTTCGCC 60.136 52.381 0.00 0.00 0.00 5.54
1979 2009 1.135575 CCAAGCACCAGATTTCTTCGC 60.136 52.381 0.00 0.00 0.00 4.70
1980 2010 1.470098 CCCAAGCACCAGATTTCTTCG 59.530 52.381 0.00 0.00 0.00 3.79
1981 2011 2.751806 CTCCCAAGCACCAGATTTCTTC 59.248 50.000 0.00 0.00 0.00 2.87
1982 2012 2.556114 CCTCCCAAGCACCAGATTTCTT 60.556 50.000 0.00 0.00 0.00 2.52
1983 2013 1.005215 CCTCCCAAGCACCAGATTTCT 59.995 52.381 0.00 0.00 0.00 2.52
1984 2014 1.272147 ACCTCCCAAGCACCAGATTTC 60.272 52.381 0.00 0.00 0.00 2.17
1985 2015 0.779997 ACCTCCCAAGCACCAGATTT 59.220 50.000 0.00 0.00 0.00 2.17
1986 2016 0.779997 AACCTCCCAAGCACCAGATT 59.220 50.000 0.00 0.00 0.00 2.40
1987 2017 0.779997 AAACCTCCCAAGCACCAGAT 59.220 50.000 0.00 0.00 0.00 2.90
1988 2018 1.440618 TAAACCTCCCAAGCACCAGA 58.559 50.000 0.00 0.00 0.00 3.86
1989 2019 2.514458 ATAAACCTCCCAAGCACCAG 57.486 50.000 0.00 0.00 0.00 4.00
1990 2020 3.308832 CCTTATAAACCTCCCAAGCACCA 60.309 47.826 0.00 0.00 0.00 4.17
1991 2021 3.053917 TCCTTATAAACCTCCCAAGCACC 60.054 47.826 0.00 0.00 0.00 5.01
1992 2022 4.230745 TCCTTATAAACCTCCCAAGCAC 57.769 45.455 0.00 0.00 0.00 4.40
1993 2023 4.386312 CCATCCTTATAAACCTCCCAAGCA 60.386 45.833 0.00 0.00 0.00 3.91
1994 2024 4.141251 TCCATCCTTATAAACCTCCCAAGC 60.141 45.833 0.00 0.00 0.00 4.01
1995 2025 5.377478 GTCCATCCTTATAAACCTCCCAAG 58.623 45.833 0.00 0.00 0.00 3.61
1996 2026 4.167307 GGTCCATCCTTATAAACCTCCCAA 59.833 45.833 0.00 0.00 0.00 4.12
1997 2027 3.720002 GGTCCATCCTTATAAACCTCCCA 59.280 47.826 0.00 0.00 0.00 4.37
1998 2028 3.244457 CGGTCCATCCTTATAAACCTCCC 60.244 52.174 1.39 0.00 0.00 4.30
1999 2029 3.244457 CCGGTCCATCCTTATAAACCTCC 60.244 52.174 0.00 0.00 0.00 4.30
2000 2030 3.244457 CCCGGTCCATCCTTATAAACCTC 60.244 52.174 0.00 0.00 0.00 3.85
2001 2031 2.709397 CCCGGTCCATCCTTATAAACCT 59.291 50.000 0.00 0.00 0.00 3.50
2002 2032 2.224695 CCCCGGTCCATCCTTATAAACC 60.225 54.545 0.00 0.00 0.00 3.27
2003 2033 2.224695 CCCCCGGTCCATCCTTATAAAC 60.225 54.545 0.00 0.00 0.00 2.01
2004 2034 2.059490 CCCCCGGTCCATCCTTATAAA 58.941 52.381 0.00 0.00 0.00 1.40
2005 2035 1.737199 CCCCCGGTCCATCCTTATAA 58.263 55.000 0.00 0.00 0.00 0.98
2006 2036 0.838987 GCCCCCGGTCCATCCTTATA 60.839 60.000 0.00 0.00 0.00 0.98
2007 2037 2.154074 GCCCCCGGTCCATCCTTAT 61.154 63.158 0.00 0.00 0.00 1.73
2008 2038 2.770904 GCCCCCGGTCCATCCTTA 60.771 66.667 0.00 0.00 0.00 2.69
2026 2056 4.927782 TACCGCCATGCATCCGCC 62.928 66.667 0.00 0.00 37.32 6.13
2027 2057 3.349006 CTACCGCCATGCATCCGC 61.349 66.667 0.00 0.00 39.24 5.54
2028 2058 2.666190 CCTACCGCCATGCATCCG 60.666 66.667 0.00 2.38 0.00 4.18
2029 2059 2.980233 GCCTACCGCCATGCATCC 60.980 66.667 0.00 0.00 0.00 3.51
2030 2060 3.349006 CGCCTACCGCCATGCATC 61.349 66.667 0.00 0.00 0.00 3.91
2031 2061 4.935495 CCGCCTACCGCCATGCAT 62.935 66.667 0.00 0.00 35.03 3.96
2034 2064 2.872388 ATCTCCGCCTACCGCCATG 61.872 63.158 0.00 0.00 35.03 3.66
2035 2065 2.524394 ATCTCCGCCTACCGCCAT 60.524 61.111 0.00 0.00 35.03 4.40
2036 2066 3.536917 CATCTCCGCCTACCGCCA 61.537 66.667 0.00 0.00 35.03 5.69
2037 2067 3.214250 CTCATCTCCGCCTACCGCC 62.214 68.421 0.00 0.00 35.03 6.13
2038 2068 2.336809 CTCATCTCCGCCTACCGC 59.663 66.667 0.00 0.00 35.03 5.68
2039 2069 2.565645 CCCTCATCTCCGCCTACCG 61.566 68.421 0.00 0.00 0.00 4.02
2040 2070 2.210711 CCCCTCATCTCCGCCTACC 61.211 68.421 0.00 0.00 0.00 3.18
2041 2071 1.152525 TCCCCTCATCTCCGCCTAC 60.153 63.158 0.00 0.00 0.00 3.18
2042 2072 1.153989 CTCCCCTCATCTCCGCCTA 59.846 63.158 0.00 0.00 0.00 3.93
2043 2073 2.123077 CTCCCCTCATCTCCGCCT 60.123 66.667 0.00 0.00 0.00 5.52
2044 2074 3.237741 CCTCCCCTCATCTCCGCC 61.238 72.222 0.00 0.00 0.00 6.13
2045 2075 3.237741 CCCTCCCCTCATCTCCGC 61.238 72.222 0.00 0.00 0.00 5.54
2046 2076 3.237741 GCCCTCCCCTCATCTCCG 61.238 72.222 0.00 0.00 0.00 4.63
2047 2077 3.237741 CGCCCTCCCCTCATCTCC 61.238 72.222 0.00 0.00 0.00 3.71
2048 2078 3.237741 CCGCCCTCCCCTCATCTC 61.238 72.222 0.00 0.00 0.00 2.75
2049 2079 4.888325 CCCGCCCTCCCCTCATCT 62.888 72.222 0.00 0.00 0.00 2.90
2069 2099 4.154347 CTCCACGCCAGCCTCTCC 62.154 72.222 0.00 0.00 0.00 3.71
2070 2100 4.828925 GCTCCACGCCAGCCTCTC 62.829 72.222 0.00 0.00 0.00 3.20
2089 2119 4.033776 ATCACCCGTGGGCAGTGG 62.034 66.667 4.41 0.00 39.32 4.00
2090 2120 2.747460 CATCACCCGTGGGCAGTG 60.747 66.667 4.41 0.00 39.32 3.66
2091 2121 4.033776 CCATCACCCGTGGGCAGT 62.034 66.667 4.41 0.00 39.32 4.40
2092 2122 3.687321 CTCCATCACCCGTGGGCAG 62.687 68.421 4.41 0.00 39.32 4.85
2093 2123 3.716195 CTCCATCACCCGTGGGCA 61.716 66.667 4.41 0.00 39.32 5.36
2094 2124 4.489771 CCTCCATCACCCGTGGGC 62.490 72.222 4.41 0.00 39.32 5.36
2095 2125 4.489771 GCCTCCATCACCCGTGGG 62.490 72.222 2.58 2.58 37.34 4.61
2096 2126 3.716195 TGCCTCCATCACCCGTGG 61.716 66.667 0.00 0.00 38.11 4.94
2097 2127 2.436646 GTGCCTCCATCACCCGTG 60.437 66.667 0.00 0.00 0.00 4.94
2098 2128 4.082523 CGTGCCTCCATCACCCGT 62.083 66.667 0.00 0.00 0.00 5.28
2100 2130 4.408821 TGCGTGCCTCCATCACCC 62.409 66.667 0.00 0.00 0.00 4.61
2101 2131 2.599645 ATCTGCGTGCCTCCATCACC 62.600 60.000 0.00 0.00 0.00 4.02
2102 2132 1.153289 ATCTGCGTGCCTCCATCAC 60.153 57.895 0.00 0.00 0.00 3.06
2103 2133 1.144716 GATCTGCGTGCCTCCATCA 59.855 57.895 0.00 0.00 0.00 3.07
2104 2134 1.953138 CGATCTGCGTGCCTCCATC 60.953 63.158 0.00 0.00 34.64 3.51
2105 2135 2.107750 CGATCTGCGTGCCTCCAT 59.892 61.111 0.00 0.00 34.64 3.41
2106 2136 4.147449 CCGATCTGCGTGCCTCCA 62.147 66.667 0.00 0.00 38.67 3.86
2107 2137 3.838271 TCCGATCTGCGTGCCTCC 61.838 66.667 0.00 0.00 38.67 4.30
2108 2138 2.583593 GTCCGATCTGCGTGCCTC 60.584 66.667 0.00 0.00 38.67 4.70
2109 2139 4.498520 CGTCCGATCTGCGTGCCT 62.499 66.667 0.00 0.00 38.67 4.75
2111 2141 4.796231 ACCGTCCGATCTGCGTGC 62.796 66.667 0.00 0.00 38.67 5.34
2112 2142 2.880879 CACCGTCCGATCTGCGTG 60.881 66.667 0.00 0.00 38.67 5.34
2113 2143 4.129737 CCACCGTCCGATCTGCGT 62.130 66.667 0.00 0.00 38.67 5.24
2114 2144 4.129737 ACCACCGTCCGATCTGCG 62.130 66.667 0.00 0.00 40.47 5.18
2115 2145 2.202756 GACCACCGTCCGATCTGC 60.203 66.667 0.00 0.00 32.40 4.26
2116 2146 2.102357 CGACCACCGTCCGATCTG 59.898 66.667 0.00 0.00 35.40 2.90
2125 2155 4.619227 AACCTGCCACGACCACCG 62.619 66.667 0.00 0.00 45.44 4.94
2126 2156 2.668550 GAACCTGCCACGACCACC 60.669 66.667 0.00 0.00 0.00 4.61
2127 2157 1.961277 CTGAACCTGCCACGACCAC 60.961 63.158 0.00 0.00 0.00 4.16
2128 2158 1.480212 ATCTGAACCTGCCACGACCA 61.480 55.000 0.00 0.00 0.00 4.02
2129 2159 0.741221 GATCTGAACCTGCCACGACC 60.741 60.000 0.00 0.00 0.00 4.79
2130 2160 1.078759 CGATCTGAACCTGCCACGAC 61.079 60.000 0.00 0.00 0.00 4.34
2131 2161 1.215382 CGATCTGAACCTGCCACGA 59.785 57.895 0.00 0.00 0.00 4.35
2132 2162 0.670546 AACGATCTGAACCTGCCACG 60.671 55.000 0.00 0.00 0.00 4.94
2133 2163 0.798776 CAACGATCTGAACCTGCCAC 59.201 55.000 0.00 0.00 0.00 5.01
2134 2164 0.321564 CCAACGATCTGAACCTGCCA 60.322 55.000 0.00 0.00 0.00 4.92
2135 2165 1.026718 CCCAACGATCTGAACCTGCC 61.027 60.000 0.00 0.00 0.00 4.85
2136 2166 1.026718 CCCCAACGATCTGAACCTGC 61.027 60.000 0.00 0.00 0.00 4.85
2137 2167 0.613260 TCCCCAACGATCTGAACCTG 59.387 55.000 0.00 0.00 0.00 4.00
2138 2168 1.279271 CTTCCCCAACGATCTGAACCT 59.721 52.381 0.00 0.00 0.00 3.50
2139 2169 1.278127 TCTTCCCCAACGATCTGAACC 59.722 52.381 0.00 0.00 0.00 3.62
2140 2170 2.347731 GTCTTCCCCAACGATCTGAAC 58.652 52.381 0.00 0.00 0.00 3.18
2141 2171 1.067142 CGTCTTCCCCAACGATCTGAA 60.067 52.381 0.00 0.00 41.29 3.02
2142 2172 0.530744 CGTCTTCCCCAACGATCTGA 59.469 55.000 0.00 0.00 41.29 3.27
2143 2173 0.530744 TCGTCTTCCCCAACGATCTG 59.469 55.000 0.00 0.00 42.49 2.90
2144 2174 2.971676 TCGTCTTCCCCAACGATCT 58.028 52.632 0.00 0.00 42.49 2.75
2148 2178 1.135315 TCGTAATCGTCTTCCCCAACG 60.135 52.381 0.00 0.00 40.17 4.10
2149 2179 2.660189 TCGTAATCGTCTTCCCCAAC 57.340 50.000 0.00 0.00 38.33 3.77
2150 2180 2.761767 TCATCGTAATCGTCTTCCCCAA 59.238 45.455 0.00 0.00 38.33 4.12
2151 2181 2.380941 TCATCGTAATCGTCTTCCCCA 58.619 47.619 0.00 0.00 38.33 4.96
2152 2182 3.662247 ATCATCGTAATCGTCTTCCCC 57.338 47.619 0.00 0.00 38.33 4.81
2153 2183 4.809426 ACAAATCATCGTAATCGTCTTCCC 59.191 41.667 0.00 0.00 38.33 3.97
2154 2184 5.728255 CACAAATCATCGTAATCGTCTTCC 58.272 41.667 0.00 0.00 38.33 3.46
2155 2185 5.191059 GCACAAATCATCGTAATCGTCTTC 58.809 41.667 0.00 0.00 38.33 2.87
2156 2186 4.259810 CGCACAAATCATCGTAATCGTCTT 60.260 41.667 0.00 0.00 38.33 3.01
2157 2187 3.242944 CGCACAAATCATCGTAATCGTCT 59.757 43.478 0.00 0.00 38.33 4.18
2158 2188 3.242016 TCGCACAAATCATCGTAATCGTC 59.758 43.478 0.00 0.00 38.33 4.20
2159 2189 3.183754 TCGCACAAATCATCGTAATCGT 58.816 40.909 0.00 0.00 38.33 3.73
2160 2190 3.362014 CCTCGCACAAATCATCGTAATCG 60.362 47.826 0.00 0.00 38.55 3.34
2161 2191 3.555956 ACCTCGCACAAATCATCGTAATC 59.444 43.478 0.00 0.00 0.00 1.75
2162 2192 3.309682 CACCTCGCACAAATCATCGTAAT 59.690 43.478 0.00 0.00 0.00 1.89
2163 2193 2.670905 CACCTCGCACAAATCATCGTAA 59.329 45.455 0.00 0.00 0.00 3.18
2164 2194 2.267426 CACCTCGCACAAATCATCGTA 58.733 47.619 0.00 0.00 0.00 3.43
2165 2195 1.078709 CACCTCGCACAAATCATCGT 58.921 50.000 0.00 0.00 0.00 3.73
2166 2196 0.374758 CCACCTCGCACAAATCATCG 59.625 55.000 0.00 0.00 0.00 3.84
2167 2197 1.737838 TCCACCTCGCACAAATCATC 58.262 50.000 0.00 0.00 0.00 2.92
2168 2198 1.812571 GTTCCACCTCGCACAAATCAT 59.187 47.619 0.00 0.00 0.00 2.45
2169 2199 1.234821 GTTCCACCTCGCACAAATCA 58.765 50.000 0.00 0.00 0.00 2.57
2170 2200 1.234821 TGTTCCACCTCGCACAAATC 58.765 50.000 0.00 0.00 0.00 2.17
2171 2201 1.686355 TTGTTCCACCTCGCACAAAT 58.314 45.000 0.00 0.00 0.00 2.32
2172 2202 1.403679 CTTTGTTCCACCTCGCACAAA 59.596 47.619 0.00 0.00 36.91 2.83
2173 2203 1.021202 CTTTGTTCCACCTCGCACAA 58.979 50.000 0.00 0.00 0.00 3.33
2174 2204 0.107410 ACTTTGTTCCACCTCGCACA 60.107 50.000 0.00 0.00 0.00 4.57
2175 2205 1.873698 TACTTTGTTCCACCTCGCAC 58.126 50.000 0.00 0.00 0.00 5.34
2176 2206 2.623878 TTACTTTGTTCCACCTCGCA 57.376 45.000 0.00 0.00 0.00 5.10
2177 2207 3.500680 TGAATTACTTTGTTCCACCTCGC 59.499 43.478 0.00 0.00 0.00 5.03
2178 2208 4.154195 CCTGAATTACTTTGTTCCACCTCG 59.846 45.833 0.00 0.00 0.00 4.63
2179 2209 5.313712 TCCTGAATTACTTTGTTCCACCTC 58.686 41.667 0.00 0.00 0.00 3.85
2180 2210 5.319043 TCCTGAATTACTTTGTTCCACCT 57.681 39.130 0.00 0.00 0.00 4.00
2181 2211 5.946377 AGATCCTGAATTACTTTGTTCCACC 59.054 40.000 0.00 0.00 0.00 4.61
2182 2212 8.451748 GTTAGATCCTGAATTACTTTGTTCCAC 58.548 37.037 0.00 0.00 0.00 4.02
2183 2213 7.333423 CGTTAGATCCTGAATTACTTTGTTCCA 59.667 37.037 0.00 0.00 0.00 3.53
2184 2214 7.201617 CCGTTAGATCCTGAATTACTTTGTTCC 60.202 40.741 0.00 0.00 0.00 3.62
2185 2215 7.333672 ACCGTTAGATCCTGAATTACTTTGTTC 59.666 37.037 0.00 0.00 0.00 3.18
2186 2216 7.166167 ACCGTTAGATCCTGAATTACTTTGTT 58.834 34.615 0.00 0.00 0.00 2.83
2187 2217 6.708285 ACCGTTAGATCCTGAATTACTTTGT 58.292 36.000 0.00 0.00 0.00 2.83
2188 2218 7.549488 AGAACCGTTAGATCCTGAATTACTTTG 59.451 37.037 0.00 0.00 0.00 2.77
2189 2219 7.549488 CAGAACCGTTAGATCCTGAATTACTTT 59.451 37.037 0.00 0.00 0.00 2.66
2190 2220 7.042335 CAGAACCGTTAGATCCTGAATTACTT 58.958 38.462 0.00 0.00 0.00 2.24
2191 2221 6.407074 CCAGAACCGTTAGATCCTGAATTACT 60.407 42.308 0.00 0.00 0.00 2.24
2192 2222 5.753921 CCAGAACCGTTAGATCCTGAATTAC 59.246 44.000 0.00 0.00 0.00 1.89
2193 2223 5.659525 TCCAGAACCGTTAGATCCTGAATTA 59.340 40.000 0.00 0.00 0.00 1.40
2194 2224 4.469945 TCCAGAACCGTTAGATCCTGAATT 59.530 41.667 0.00 0.00 0.00 2.17
2195 2225 4.030913 TCCAGAACCGTTAGATCCTGAAT 58.969 43.478 0.00 0.00 0.00 2.57
2196 2226 3.437213 TCCAGAACCGTTAGATCCTGAA 58.563 45.455 0.00 0.00 0.00 3.02
2197 2227 3.095912 TCCAGAACCGTTAGATCCTGA 57.904 47.619 0.00 0.00 0.00 3.86
2198 2228 3.887621 TTCCAGAACCGTTAGATCCTG 57.112 47.619 0.00 0.00 0.00 3.86
2199 2229 4.903045 TTTTCCAGAACCGTTAGATCCT 57.097 40.909 0.00 0.00 0.00 3.24
2200 2230 5.220605 CGAATTTTCCAGAACCGTTAGATCC 60.221 44.000 0.00 0.00 0.00 3.36
2201 2231 5.579511 TCGAATTTTCCAGAACCGTTAGATC 59.420 40.000 0.00 0.00 0.00 2.75
2202 2232 5.484715 TCGAATTTTCCAGAACCGTTAGAT 58.515 37.500 0.00 0.00 0.00 1.98
2203 2233 4.885413 TCGAATTTTCCAGAACCGTTAGA 58.115 39.130 0.00 0.00 0.00 2.10
2204 2234 5.500290 CGATCGAATTTTCCAGAACCGTTAG 60.500 44.000 10.26 0.00 0.00 2.34
2205 2235 4.327898 CGATCGAATTTTCCAGAACCGTTA 59.672 41.667 10.26 0.00 0.00 3.18
2206 2236 3.124636 CGATCGAATTTTCCAGAACCGTT 59.875 43.478 10.26 0.00 0.00 4.44
2207 2237 2.671396 CGATCGAATTTTCCAGAACCGT 59.329 45.455 10.26 0.00 0.00 4.83
2208 2238 2.927477 TCGATCGAATTTTCCAGAACCG 59.073 45.455 16.99 0.00 0.00 4.44
2209 2239 3.063588 GGTCGATCGAATTTTCCAGAACC 59.936 47.826 21.31 8.91 0.00 3.62
2210 2240 3.063588 GGGTCGATCGAATTTTCCAGAAC 59.936 47.826 21.31 2.86 0.00 3.01
2211 2241 3.267483 GGGTCGATCGAATTTTCCAGAA 58.733 45.455 21.31 0.00 0.00 3.02
2212 2242 2.235155 TGGGTCGATCGAATTTTCCAGA 59.765 45.455 21.31 4.12 0.00 3.86
2213 2243 2.627945 TGGGTCGATCGAATTTTCCAG 58.372 47.619 21.31 0.00 0.00 3.86
2214 2244 2.772077 TGGGTCGATCGAATTTTCCA 57.228 45.000 21.31 18.04 0.00 3.53
2215 2245 4.497507 GGATTTGGGTCGATCGAATTTTCC 60.498 45.833 21.31 15.98 0.00 3.13
2216 2246 4.598062 GGATTTGGGTCGATCGAATTTTC 58.402 43.478 21.31 11.69 0.00 2.29
2217 2247 3.064820 CGGATTTGGGTCGATCGAATTTT 59.935 43.478 21.31 2.74 0.00 1.82
2218 2248 2.612212 CGGATTTGGGTCGATCGAATTT 59.388 45.455 21.31 1.60 0.00 1.82
2219 2249 2.210116 CGGATTTGGGTCGATCGAATT 58.790 47.619 21.31 0.11 0.00 2.17
2220 2250 1.138266 ACGGATTTGGGTCGATCGAAT 59.862 47.619 21.31 9.34 0.00 3.34
2221 2251 0.533491 ACGGATTTGGGTCGATCGAA 59.467 50.000 21.31 3.78 0.00 3.71
2222 2252 0.533491 AACGGATTTGGGTCGATCGA 59.467 50.000 15.15 15.15 0.00 3.59
2223 2253 1.365699 AAACGGATTTGGGTCGATCG 58.634 50.000 9.36 9.36 0.00 3.69
2224 2254 3.189702 TGAAAAACGGATTTGGGTCGATC 59.810 43.478 0.00 0.00 0.00 3.69
2225 2255 3.150767 TGAAAAACGGATTTGGGTCGAT 58.849 40.909 0.00 0.00 0.00 3.59
2226 2256 2.550606 CTGAAAAACGGATTTGGGTCGA 59.449 45.455 0.00 0.00 0.00 4.20
2227 2257 2.351350 CCTGAAAAACGGATTTGGGTCG 60.351 50.000 0.00 0.00 0.00 4.79
2228 2258 2.609491 GCCTGAAAAACGGATTTGGGTC 60.609 50.000 0.00 0.00 0.00 4.46
2229 2259 1.343142 GCCTGAAAAACGGATTTGGGT 59.657 47.619 0.00 0.00 0.00 4.51
2230 2260 1.342819 TGCCTGAAAAACGGATTTGGG 59.657 47.619 0.00 0.00 0.00 4.12
2231 2261 2.799978 GTTGCCTGAAAAACGGATTTGG 59.200 45.455 0.00 0.00 0.00 3.28
2232 2262 3.716601 AGTTGCCTGAAAAACGGATTTG 58.283 40.909 0.00 0.00 0.00 2.32
2233 2263 4.400529 AAGTTGCCTGAAAAACGGATTT 57.599 36.364 0.00 0.00 0.00 2.17
2234 2264 4.119136 CAAAGTTGCCTGAAAAACGGATT 58.881 39.130 0.00 0.00 0.00 3.01
2235 2265 3.132111 ACAAAGTTGCCTGAAAAACGGAT 59.868 39.130 0.00 0.00 0.00 4.18
2236 2266 2.494073 ACAAAGTTGCCTGAAAAACGGA 59.506 40.909 0.00 0.00 0.00 4.69
2237 2267 2.887337 ACAAAGTTGCCTGAAAAACGG 58.113 42.857 0.00 0.00 0.00 4.44
2238 2268 3.305897 GGAACAAAGTTGCCTGAAAAACG 59.694 43.478 0.00 0.00 0.00 3.60
2239 2269 4.503910 AGGAACAAAGTTGCCTGAAAAAC 58.496 39.130 0.00 0.00 0.00 2.43
2240 2270 4.676723 CGAGGAACAAAGTTGCCTGAAAAA 60.677 41.667 0.00 0.00 0.00 1.94
2241 2271 3.181491 CGAGGAACAAAGTTGCCTGAAAA 60.181 43.478 0.00 0.00 0.00 2.29
2242 2272 2.357637 CGAGGAACAAAGTTGCCTGAAA 59.642 45.455 0.00 0.00 0.00 2.69
2243 2273 1.946768 CGAGGAACAAAGTTGCCTGAA 59.053 47.619 0.00 0.00 0.00 3.02
2244 2274 1.140052 TCGAGGAACAAAGTTGCCTGA 59.860 47.619 0.00 0.00 0.00 3.86
2245 2275 1.593196 TCGAGGAACAAAGTTGCCTG 58.407 50.000 0.00 0.00 0.00 4.85
2246 2276 2.341846 TTCGAGGAACAAAGTTGCCT 57.658 45.000 0.00 0.00 0.00 4.75
2247 2277 3.430333 TTTTCGAGGAACAAAGTTGCC 57.570 42.857 0.00 0.00 0.00 4.52
2248 2278 3.182372 GCATTTTCGAGGAACAAAGTTGC 59.818 43.478 0.00 0.00 0.00 4.17
2249 2279 4.610945 AGCATTTTCGAGGAACAAAGTTG 58.389 39.130 0.00 0.00 0.00 3.16
2250 2280 4.918810 AGCATTTTCGAGGAACAAAGTT 57.081 36.364 0.00 0.00 0.00 2.66
2251 2281 6.385649 TTTAGCATTTTCGAGGAACAAAGT 57.614 33.333 0.00 0.00 0.00 2.66
2252 2282 6.183360 GCATTTAGCATTTTCGAGGAACAAAG 60.183 38.462 0.00 0.00 44.79 2.77
2253 2283 5.633182 GCATTTAGCATTTTCGAGGAACAAA 59.367 36.000 0.00 0.00 44.79 2.83
2254 2284 5.160641 GCATTTAGCATTTTCGAGGAACAA 58.839 37.500 0.00 0.00 44.79 2.83
2255 2285 4.732784 GCATTTAGCATTTTCGAGGAACA 58.267 39.130 0.00 0.00 44.79 3.18
2269 2299 0.375106 GACTGGCTCGTGCATTTAGC 59.625 55.000 12.07 8.84 45.96 3.09
2270 2300 0.647410 CGACTGGCTCGTGCATTTAG 59.353 55.000 12.07 6.31 41.91 1.85
2271 2301 2.749541 CGACTGGCTCGTGCATTTA 58.250 52.632 12.07 0.00 41.91 1.40
2272 2302 3.566261 CGACTGGCTCGTGCATTT 58.434 55.556 12.07 0.00 41.91 2.32
2280 2310 1.739067 AAAATGGCTACGACTGGCTC 58.261 50.000 0.00 0.00 0.00 4.70
2281 2311 2.027561 TGTAAAATGGCTACGACTGGCT 60.028 45.455 0.00 0.00 0.00 4.75
2282 2312 2.351726 CTGTAAAATGGCTACGACTGGC 59.648 50.000 0.00 0.00 0.00 4.85
2283 2313 2.936498 CCTGTAAAATGGCTACGACTGG 59.064 50.000 0.00 0.00 0.00 4.00
2284 2314 2.936498 CCCTGTAAAATGGCTACGACTG 59.064 50.000 0.00 0.00 0.00 3.51
2285 2315 2.570302 ACCCTGTAAAATGGCTACGACT 59.430 45.455 0.00 0.00 0.00 4.18
2286 2316 2.934553 GACCCTGTAAAATGGCTACGAC 59.065 50.000 0.00 0.00 0.00 4.34
2287 2317 2.093341 GGACCCTGTAAAATGGCTACGA 60.093 50.000 0.00 0.00 0.00 3.43
2288 2318 2.093128 AGGACCCTGTAAAATGGCTACG 60.093 50.000 0.00 0.00 0.00 3.51
2289 2319 3.646736 AGGACCCTGTAAAATGGCTAC 57.353 47.619 0.00 0.00 0.00 3.58
2290 2320 3.053917 GGAAGGACCCTGTAAAATGGCTA 60.054 47.826 0.00 0.00 0.00 3.93
2291 2321 2.291605 GGAAGGACCCTGTAAAATGGCT 60.292 50.000 0.00 0.00 0.00 4.75
2292 2322 2.100197 GGAAGGACCCTGTAAAATGGC 58.900 52.381 0.00 0.00 0.00 4.40
2293 2323 3.267031 AGAGGAAGGACCCTGTAAAATGG 59.733 47.826 0.00 0.00 40.05 3.16
2294 2324 4.576330 AGAGGAAGGACCCTGTAAAATG 57.424 45.455 0.00 0.00 40.05 2.32
2295 2325 6.314899 CTTAGAGGAAGGACCCTGTAAAAT 57.685 41.667 0.00 0.00 40.26 1.82
2296 2326 5.757099 CTTAGAGGAAGGACCCTGTAAAA 57.243 43.478 0.00 0.00 40.26 1.52
2308 2338 4.487714 TTGTACATGCCCTTAGAGGAAG 57.512 45.455 0.00 0.00 37.67 3.46
2309 2339 4.385199 CCATTGTACATGCCCTTAGAGGAA 60.385 45.833 0.00 0.00 37.67 3.36
2310 2340 3.136443 CCATTGTACATGCCCTTAGAGGA 59.864 47.826 0.00 0.00 37.67 3.71
2311 2341 3.117888 ACCATTGTACATGCCCTTAGAGG 60.118 47.826 0.00 0.00 34.30 3.69
2312 2342 4.156455 ACCATTGTACATGCCCTTAGAG 57.844 45.455 0.00 0.00 0.00 2.43
2313 2343 4.269183 CAACCATTGTACATGCCCTTAGA 58.731 43.478 0.00 0.00 0.00 2.10
2314 2344 4.637483 CAACCATTGTACATGCCCTTAG 57.363 45.455 0.00 0.00 0.00 2.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.