>input_sequence_83506
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-----------------------------------------ATGTTTGGGACTGATTTATGTCCCAATAATCTATGTCAA
TTTTATTCTTGGTGCTATGCTTTTCTTCCTCAAGGGGAATGGTGCTTCACTATGGGGCTGGCGGCTATATGTTGGGCCAT
TTGGAATCGTAGAAATCAGACTACCTTTGAATTCAAGAAAATGGCGTATCCTTTCGAGATTGTCTTCAACGCTTGTATGC
ACTTATCTTATTGGGCAGGTCTCCTGAAGGGCGAAAGGCGAGTGGAGTTGGAGCATGGTGCGGTGATTCTGAAGGAGAAT
GCTAAAGAGATGATGAGAATCTGCGCGACTGCACACGCGGGCGATGCCGTGGAGTGA-----------------------
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---------------------------------------------
>chr5A_1_TraesCS5A01G439500
AATTCGATATCTTAAATGTTGTGACTCATGGATTGGTAATTCTGCCTCGTCTGGTGAGAGATTAACTTTGTTGAATTCAT
CCCTCTCGAGCATTGCTTATTATTGTATGTCAATGTTCCTACTTTCTAAGACATTTATCGAGAGACTCGATAAATATCGT
CGTAAGTTTTTTTGGTGTGGAGGGAGGGGTAAAAAGCGTTATTATCTGGTTAAATGGACCAGGGTGTGCCGATCTAAGAA
TAAGGGTGGGCTGGGTGTGAAAGATCTTCACAAACAGAATATCTCACTGTTAGCAAAATGGTGGTGGAAGTTAGATACAG
GGGAGGGGCTGTGGCAAGATGTGGTGAGGGCAAAATACCTTAAGAACAATTCACTAGCTGCTGTGAAAGCGAAATTTCAT
GATTCCCCTGTATGGAAAGCACTGCTTAAAATAAAAGAGATGTATATGGCTGGAAGGAAGGTGATTGTCAATAATGGCAA
TGTTGCCAGGTTGTGGCATGATCCCATTGGCACTCACCAGCCTTTGGGTGTCACTTATCCGACCCTGTTCAGTATCACTA
ATTATCAGGACGATACTATTGCTCAATTTATC-AAGCGTGCTAGTGGAGATATATTCAGACGCAGGCTGAATGCAGACCT
GAGCTGTCAGTTTAGTGAGGTTAAGAAAATTATTGATGGCATTGACACCTCGGCTGGTCCAGATAAGATTGTGTGGGGTG
CTGGGCCCAACGGCAAATATACCACTAAATCCATGTATTCTTACCTGGAGAAAGATCTTACTGGTTGTGACTATAGATGG
ATTTGGAGGGCTAGATTACCTACCAAAATCCAGATTTTCCTTTGGCAACTCTTCCAGGATGTTGTTCTGACTAGGGATGT
TATGAAGCGTCGAAACTGGGCCGGCAATCCCAGGTGTTCTTTCTGTGATTGCAGAGAAACCTATTTACATCTGTTCTTTC
TTTGCCCAGTGGCAAGGGTTGTCTGGCGCACGGTTGGGGCGATGTTTGGGACTGATTTATGTCCCAATAATCTATGTCAA
TTTTATTCTTGGTGCTATGCTTTTCTTCCTCAAGGGGAATGGTGCTTCACTATGGGGCTGGCGGCTATATGTTGGGCCAT
TTGGAATCGTAGAAATCAGACTACCTTTGAATTCAAGAAAATGGCGTATCCTTTCGAGATTGTCTTCAACGCTTGTATGC
ACTTATCTTATTGGGCAGGTCTCCTGAAGGGCGAAAGGCGAGTGGAGTTGGAGCATGGTGCGGTGATTCTGAAGGAGAAT
GCTAAAGAGATGATGAGAATCTGCGCGACTGCACACGCGGGCGATGCCGTGGAGTGATCAGCTGCTGGGATGCTG-----
-----AG-T-CA-TTTTGG-A-AAACCTTTTGGAG-TGCAT-GGGTCGAGACACCAA-GACTTTGGAGAGCG--TTTTCT
GGAGCTTTGTTTTTT--ATATTCTGCATAACTATGATGCTTTGGTG-CGGGA-TTGTAATGTGATCTGAACTTTAGTTTG
GTTCG-CGGCGTGTTGATGGTGCTTCAGGGTTTTCGTCTCGTAGTGGGCGTTTCGATTGCGAGCGCTCACAGCGGGTTTC
ACTGAA-GTGCTTGATCTCGCTTTTTCCCTTTCCCTTGTTTGAACTCGGAACTGGCTGTATTTCCGTTATATTT-TT-AA
TGGAAAGGGGATTAGCCCGGGTCAAAAAAAAGTGCATGTACTGGCTGTGTGCTGTGGGAGTGGGACTCTTGACGCAAGTT
AGCATGTCTGTTATAACTTATAAACCTTGAGTGTTATAAACTTTGTCGCAATAGTTAAATATAAGTTGTTTGAATTTTGA
TTTTGTGTCAGTCAATGTGTGGCAAAAAGAAGGGGGAAATGAGGCGCATCACCAAGGCTGCAGATGGCCGCGCCGAGGCA
AGCATAGCAAGGACCAGGGATGCCGGCAAGGCCTCGGCCGGGAACGAGCCGTAAGTGGAGGCTACTAGGTGGTTGACGTA
CGGGCCCGGCGAAGAAATCTGGTGCTTGGGAGGTTTATAAGGATGGACCGGGGGCGGCGGATGCATGGCGGTAGGCGGAG
ATGAGGGGAGGGCGGGGCGGAGAGGCTGGCGTGGAGCGCCACTGCCCACGGGTGATGGAGGCACGCAGATCGGACGGTGG
TCGTGGCAGGTTCAGATCGTTGGGGAAGACGATTACGATGATTTGTGCGAGGTGGAACAAAGTAATTCAGGATCTAACGG
TTCTGGAAAATTCGATCGACCCAAATCCGTTTTTCAGGCAACTTTGTTCCTCGAAAATGCTAAATGCACGAGCCAGTCGT
AGCCATTTTACAGGGTCCTTCCTCTAAGGGCATGTACAATGGTTG
>chr7A_1
AATTCGATATCTTAAATGTTGTGACTCGTGGATTGGTAATTCTACCTCGTCTGGTGGGAGATTAACTTTGTTGAATTCAT
CCCTCTCGAGCATTGCTTATTATTATATGTCAATATTCCTACTTTCTAAGACATTTATCGAGAGACTCGATAAATATCGT
CGTAAGTTTTTTTGGTGTGGAGGGAGGGGTAAAAAGCATTATTATCTGGTTAAATGGACCAGGGTGTGCCCATCTAAGAA
TAAGGGTGGGCTGGGTGTGAAAGATCTTCACAAACAGAATATCTCACCATTAGCAAAATGGTGGTGGAAGTTAGATACAG
GGGAGGGGATGTGGCAAGATGTGGTGAGGGCAAAATACCTTAAGAACAATTCACTAGCTGTTGTGAAAGCGAAATTTCAT
GATTCCCCTGTATGGAAAGCACTGTTTAAAGTAAAAGAGATGTATATGGCTGGAAGGAAGGTGATTGTCAATAATGGCAA
TGTTGCCAGGTTGTGGCATGATCCCATTGGCACTTACCAGCCTTTGGGTGTCACTTATCCGACCCTGTTCAGTATCACTA
ATTATCAGGACGATACTATTGCTCAATTTATC-AAACGTGCTAGTGGAGATATATTGAGACGCGGGCTGAATGCAGACCT
GAGTTGTCAGTTTAGTGAGGTTAAGAAAATTATTGATGGAATTGACACCTCGGCTGGTCCAGATAAGATTGTGTGGGATG
CTGGGCCCAACGGCAAATATACCACTAAATCCATGTATTCTTACCTGGAGAAAGATCTTACTGGTTGTGACTATAGATGG
ATT-GGAGGGCTAGATTACCTACCAAAATACAGATTTTTCTTTGGCAACTCTTCTAGGATGCCGTTTTGACTAGGGATGT
TATGAAGCGTCGGAACTGGGCCGGCAATCCCAGGTGTTCTTTCTGTGATTGCAGAGAAACCTATTTACATCTGTTCTTTC
TTTGCCCAGTGGCAAGGATTGCCTGGCGCACGGTTGGGGCGATGTTTGGGACTGACTTATGTCCCAATAATCTATGTCAA
TTTTATTCTTTGTGCTATGCTTTTCTTCCTCAAGGGGAATGGTGCTTCACTATGGGGCTGGCGGCTATATGTTGGGCCAT
TTGGAATCGTAGAAACCAGGCTACCTTTGAATTCAAGAAAATGGCGTCTCCTTTCGAGATTGTCTTCAACGCTTGTATGC
ACTTATCTTATTGGGCAGGTCTCCTGAAGGGCGAAAGGCGAGTGGAGCTGGAGCGTGGTGCGATGATTCTGAAGGAGAAT
GCTAAAGAGATGATGAGAATTTGCGCGACTGCACACGCGGGCGATGCCGTGGAGTGATCAGCTGCTGGGATGCTG-----
-----AG-T-CA-TTTTGG-A-AAACCTTTTGGAG-TGCAT-GGGTCGAGACACCAA-GACTTTGGAGAGCG--TTTTGT
GGAGCTTTGTTTCTT--ATATTCTGCATAACTATGGTGCTTTGGTG-CGGGA-TTGTAATGTGATCTGAACTTTAGTTTG
GTTCA-CGGCGTGTTGATGGTGCTTCAGGGATTTCGCCTCGTAGTGGGCGTTTCGATTGCGAGCGCTCACAGCGGATTTC
CCTGAA-GTGCTTGATCTCACTTTTTCCCTTTCCCTTGTTTGAACTCGGAACTGTCTGTATTTCCGTTATATTT-TT-AA
TGGAAAGGGGATTAGCCCGGGTCAAAAAAAA-------------------------------------------------
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---------------------------------------------
>chr5D_1
AATTCAATATCTTAAATGTTGTGATTCGTGGATTGGCAACTTTGCCTCCTCTGGTGGGAGATTAACTCTGTTGAACTCAT
CCTTCTCGAGCATTGCCTACTATTATATGTCGATGTTTCTACTTTCTAAGACATTTATCGGGAGACTCGATAAATATCGC
CATAAGTTTTTTTGGTGTGGTGGGATGGGAAAAA--CGTTACTATCCGGTAAAATGGACCAGGGTGTGTCGATCTAAGAA
TAAAGGAGGGCTGGGTGTGAAAGACCTCCATAAATAGAATATCTCACTCTTAGCAAAGTGGTGGTGGAAGTTGGATACAG
GGGAGGGGTTGTGGCAAGATGTGGTGAGAGCAAAATATCTTAAGAA---TTCACTAGCTAGTGTGAAAACAAAATTTCAT
GACTCCCCTGTTTGGAAAGCCTTACTTAAAGTAAAAGAGATGTATATGGCCGGGAGGGAAGTGATTGTCAATAATGGCAA
TGTTGCCAGGTTGTGGCATAACCCCATTGGCACCCATCCGCCTTTGGATATCACCTATCTGGCCTTGTTCAGTATTGCTA
ACTATCAGGACGATACTGTTGCTCAGTTTATG-AATCGTGCTGGTGGAGATATGTTCAGACGCAGGCTGAATGCAGACCT
GTGCTATCAATTCGATGAGGTCAAAAAAATTGTTGACAACATTGACACTTCGGCTGGTCCAGATAAGATTGTGTGGGCTG
CTGGACCCAAAGGCAAATATACCACTAAATCCATGTATTCTTATCTGGAGAGAGATCTTGCTGGTTGTGACTATAAATGG
ATTTGGAGGGCCA-ATTACCTACCAAAATCCAGATTTTCCTTTGGCAACTTTTCCAGGATGCTGTCCTGACTAGGGATGT
TATGAAGCGTCGGAACTGGGCTAGCAATCCCAGTTGTTCTTACTGCGATTGCACAGAAACCTATCTACATTTGTTCTTTC
TCTGTCCAGTGCCAAGGGTAGCCTGGCGCACTGTGGGGGCGATGCTTGGGTCCGATTTATGTCCCAACAATCTGTGCCAG
TTTTACTCTTGGTGCTATGCATTTCTTCCTCAAGGGGAACGATATTTCACTATGGGGCTGGCGGCTATATGTTGGGCTAT
TTGGAATCGTAGAAACCAGGCTACTTTTGAATTCAAGAAATTGTCATCTCCTTTTGAGATTA-TTTCAATGCTTTGATGC
ACCTATCTTATTGGGCAGGTCTCCTGAAGGGCGAAAGGCGAATGGAGCTGGAGCGTGGTGCGATGATTCTGAAGGAGAAC
GCTAAAGAGATGATGAGACTCTGCGCGACTGCACACGCGGGCGACGCCGTGGAGTGATCGG--GCCGAGATGCCA-----
-----AG-A-CA---TTTG-G-AAGCCTTTTGGAG-TGATC-GGGCCGAGATGCCAA-GACACTTGGAAGCT-TTTGTGT
GGAG-TTTGTTTCTG--ATGTCCTACTTACCTGTGTTGCCTTTGTG-C-GGG-CTGTAATGTGGTCTGAACTTTAGTTTG
GTTCG-TTGCGTGTTGATGGTGCTTCAGGGTTTTCGCCTCGTAGTGGGCGTTTCGATTGCGAACGCCCACAGCAGGTTTC
CCTGAA-GTGCTTGATCTCGCTTTTTCCCTTTCCCTTGTTTGAACTCGAAACTGGCTGTATTTCCGTTATATCT-TT-AA
TGGAAAGGGGATTAACTCCGGTCAAAAA----------------------------------------------------
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---------------------------------------------
>chr1D_1
AATTCGATATCTTAAATGTTGTGATTCGTGGATTGGCAACTCTGCCTCCTCTGG-GGGAGATTGACTTTGTTGAACTCAT
CCCTCTCGAGCATTGCCTACTATTATATGTCGATGTTTCTACTTTCTAAGACATTTATCGAGAGACTCGATAAATATCGT
CGTAAGTTTTTTTG-TGTGGTGGGATGGG-AAAAAACGTTATTATCTGGTTAAATGGACCAGGGTGTGTCGATCTAAGAA
TAAAGGAGGGCTGGGTGTGAAAGACATCCACAAACAGAATATCTCACTTTTAGCAAAGTGGTGGTGGAAGTTGGATACAG
TGGAGGGGTTGTGGCAAGATGTGGTGAGAGCAAAATATCTTAAAAACAGTTCACTAGCTACTGTGAAAACAAAATTTCAT
GACTCCCTTGTCTGGAAAGCACTACTTAAAGTAAAGGAGATGTATATGGCCGGGAGGAAAGTGATTGTCAATAGTGGCAA
TGTTGCCAGGTTGTGGCATGACCCCATTGGCACCCACCCGCCTCTGGGAACCACTTATCCAGCCTTGTTCAGTATTGCTA
ACTATCAGGACGATACTGTTGCTCAGTTTATG-AACCGTGCTAGTGGAGATATGTTCAGACACAGGCTGAATACAGACCT
GTGTTATCAATTCGATGAGGTCAAAAAGATTGTTGACAACATTGACACTTCGGCTGGTCCAGATAAGATTGTGTGGGCTG
TTGGACCCAAAGGCAAATACACCACTAAATCCATATATTCTTATCTGGAGAGAGATCTTGCTGGTTGTGACTATAAATGG
ATTTGGAGGGCCAGATTACCTACCAAAATCCAGATTTTCCTTTGGCAGCTTTTCCAGGATGCTGTCCTAACTAGGGATGT
TATGAAACGTCGGAACTGGGCTGGCAATCCCAGTTGTTCTTTCTGCGATTGCAGAGAAACTTATCTACATTTGTTCTTCC
CTTGTCCAGTGGCAAGGGTAGCCTGGCGCACTGTGGGGGCGATGCTTGGGACCGACTTATGTCCCAACAATTTATGCCAG
TTTTATTCTTGGTGCTATGCTTTTTTGCCTCAAGGGGAACAATATTTCACCATGGGGCTGGCAACTATATGCTGGGCTAT
TTGGAATCGTAGAAACCAGGCTACTTTTGAATTCAAGAAATTGTCATCTCCTTTCGAGATTGTTTTCAATGCTTGTATGC
ACCTATCTTGTTGGGCAGGTCTCCTGAAGGGCGAAAGGCGAATGGAGCTGGAGCGTGGTGCGATGATTCTGAAGGAGAAC
ACTAAAGAGATGATGAGGCTCTGCGCGACTGCACACGCGGGCGACGCTGTGGAGTGATCAG--GCCGGGATGCCA-----
-----AAAGTCA---TTTG-G-AAGCCTTTTGGAG-TGATC-GGGACGAGATACCAA-GACACTTGGAAGCA--TTTTGT
GGAGTCTGTTTTCTG--ATGTTCTACATAACTGTGTTGCCTTTTGAAT-GGG-CTGTAATGTGGTCTGAACTT-AGTTTG
GTGCGTTTGCGTGTTGATGGTGCTTCAGGGTTTTCGCCTGGTAGTGGGCGTTTCGATTGCGAGAGCCCACAGCAGGTTTC
CCTGAAAGTGCTTGATCTCACTTTTCCTCTTTCCCTTGTTTGAATTCGGAACTGGCTGTATTTCCGTTACATTT-TT-AA
TGGAAAGGGGATTAGCCCGGGTCAAAACAAAAG-----------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------
>chr5A_2
-ATTCGATATCTTAAATGTTGTGACTCGTGGATTAGCAACTCTGCCTCGTCCGGTGGGAGATTAACCTTGTTGAACTCAT
CCCTCTCTAGCATCGCTTATTATTATATGTCAATGTTCCTGCTTTCTAAGACATTTATCGAGAGACTCGATAAATATCGT
CATAAGTTTTTTTGGTGTGGAGGGAGGGATAAAAAGCGCTACTATCTGGTTAAATGGACCAGGGTGTGCCGGTCTAAGAA
TAAGGGTGGGCTGGGCGTAAAAGATCTTCACAAACAGAATATCTCACTATTAGCAAAATGGTGGTGGAAGTTGGACACAG
GCGAGGGGCTGTGGCAAGACGTGGTGAGGGCAAAATATCTTAAGAACAATTCACTAGCTACTGTGAAAGCGAAATTCCAT
GACTCCCCTGTCTGGAAAGCGCTGCTTAAAGTAAAGGAGATATATATGACTGGAAGGAAGGCGATTGTCAATAATGGCAA
CATTGCCAGGGTGTGGCATGACCCCATTGGCACTCACCAGCCTTTGGGGGTCGCTTATCCGATTTTATTTAGTATCGCTA
ACTATCAGGACGATACTATTGCTCAATTTACC-AAACGCGCTAGTGGAGATGCGTTCAGACGCAGGCTGAATGCAGATAT
GAGCCATCAGCTTAGTGAGGTCAAAAAAATTCTTGCTGGCATTAACACATCGGCTGGTCCAGATAAGATTGTGTGGGGCA
CTGGACCCAACGACAAATATACCACTAAATCCATGTACTCTTACCTGGAGAGAGATCTTGCTAGTTGTGACTTTAGATGG
ATTTGGAGAGCTAGATTACCTACCAAAATCCAGATTTTCCTTTGGCAACTCTTTCAGGATGCCGTTCTGACTAGGGACGT
TATGAGGCGTCGGAACTGGGCTGGCAACCCCAGGTGTTCTTTCTGTGATTGCAGAGAAACCTATTTACATCTGTTTTTTC
GATGCCCAGTGGCAAGGATTGCCTGGCGCACGGTTGGGGCGGTGTTTGGGACCGATTTATGTCCCAATAACCTATGTCAA
TTTTACTCTTGGTGCTATGCGTTTATTCCTCAAGGGGAATGGTGCTTCACTATGGGGCTGGCGGCTGTATGTTGGGCCAT
TTGGAATCGTAGAAACCAGGCTACTTTTGAATTTAAGAAAATGTCATCTCCTTTTGAGATTGTTTTCAACGCTTGTATGC
ACCTATCTTATTGGGCAGGTCTCCTGAAGGGCGAAAGACGAGTGGAACTGGAGCGTGGTGCGATGATTCTGAAGGAGAAT
GCTAAAGAGATGATGAGAATCTGCGCGACTGCACACACGGGCGAGACCGTGGAGTGATTCA--GCTGCTGCTGTTGGGAG
GCCTGAG-A-CA---TTGTTG-AAGCCTTTTGAAG-TGATC-GATTTGAGACACTAAAGACTCTGGAGAGCATTTGT-GT
GGAG-TTTGTTTCTT--TTGTTCTGCATAACTGTGATGCCTTGATG-C-GGG-TTGTATTGTGATCTGAACTTTAGTTTG
GTTCG-ATGCGTGTTGATGGTGCTTCGGGGTTTTCGCCTCGTAGTGGGCGTTTCGATTGCGAGCGCTCATAGCGGGTTTC
CCTGAA-GTGCTTGATCCCGCTGTTTCCCTTTTCCTTGTTTGAACTTGGAACTGGCTGTATTTCCGTTAT-ATTTTT-AA
TGGAAAGGGGATTAGCCCGGGTCGGAAAAAAAGT----------------------------------------------
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---------------------------------------------
>chr4A_2
-ATTCGATATCTTAAATGTTGTGCCTCATGGATTGGCAATTCTGCCTCGTCTGGTGGGAGATTAACTTTGTTGAACTCAT
CCCTCTCAAGCATTGCTTATTATTATATGTCAATGTTCCTGCTTTCTAAGACATTTATCGAGAGACTCGATAAATATCGT
CGTAAGTTTTTTTGGTGTAGAGGGAGGGGTAAAAAGCGCTACTATCTGGTTAAATGGACCAGGGTGTGCCGGTCTAAGAA
TAAGGGTGGGCTGGGCGTAAAAGATCTTCACAAACAGAATATCTCACTATTAGCAAAATGGTGGTGGAAGTTGGACACAG
GCGAGGGGCTGTGGCAAGACGTGGTGAGGGCAAAATACCTTAAGAACAATTCACTAGCTACTGTGAAAGCGAAATTCCAT
GACTCCCCTGTCTGGAAAGCGCTGCTTAAAGTAAATGAGATATATATGGCTGGAAGGAAGGTAATTGTCAATAATGGCAA
CATTGCCAGGGTGTGGCATGACCCCATTGGCACTCACCAGCCTTTGGGGGTCGCTTATTCGATCTTATTCAGTATCGCTA
ACTATCAGGATGATACTATTGCTCAATTTACCAAACA-CGCTAGTGGAGATGTGTTCAGACGCAGGCTGAATGCAGATCT
GAGCCATCAGCTTAGTGAGGTCAAAAAAATTATTGCTGGCATTAACACATCGGCTGGTCCAGATAAGATTGTGTGGGGCA
CTGGGCCCAACGGCAAATATACCACTAAATCCATGTACTCTTACCTAGAGAGAGATCTTGCTGGTTGTGACTTTAGATGG
ATTTGGAGGGCTAGATTACCTACCAAAATCCAGATTTTCCTTTGGCAACTCTTCCAGGATGCCGTTCTGACTAGGGACGT
TATGAAGCGTCGGAACTGGGCTGGCAACCCCAGGTGTTCTTTCTGTGATTGCAGAGAAACCTATTTACATCTGTTTTTTC
GATGCCCAGTGGCAAGGATTGCCTGGCGCATGGTTGGGGCGGTGTTTGGGACCGATTTATGTCCCAATAACCTATGTCAA
TTTTGTT-------------------------------------------------------------------------
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---------------------------------------------
>chr2A_3
--TTCGGTATCTCAAATGTTGTGACTCTTGGATTGGTAACTCTGCCTCGTCTGGTGGGAGATTGACCTTGCTTAATTCGT
CCCTTTCAAGCATTGCATATTACTATATGTCGATGTTCTTGCTGTCTAAAACTTTTACTGAGAGACTAGACAAATATCGT
CGTAAATTCTTTTGGTGTGGAGGGATGGGCAAAAAGCGGTATTATCTGGTTAAGTGGACTCGGGTGTGCCGTTCCAAGAA
CAAAGGAGGTCTAGGTGTTAAAGATCTCCACAAACAGAACATTTTTCTTTTAGCTAAATGGTGGTGGAAATTGGATACAG
GGGAAGGACTTTGGCAAGAAGTAGTAAGAGCAAAATACCCGAGGAATAATTCTGTTGCAAATGTTAAGACCAAATTTAGT
GATTCCCCTGTGTGGAAAGCACTGCTTAAAGTGAAAGAAATTTATATGGCTGGGAGGAAAGTAAATGTCAAAAATGGTAA
AATTGTCAGAGTCTGGCATGATCCTATTGGCACCCACCCTCCTTTATGTGAAGTGTATCCTGACCTGTTTAGCATTGCTA
ACTATCAGGATGACACGATTGCCCAATTTAAG-AGCCGGGATACTGGGGAGATCTTTAGGCGCAGATTGAATACAGATTT
GAACCGTCACTATGAGGGGGTTAATGATATAGTTGATAGCCTAGAACCCGTAGCGGGCCAAGATGAGATTGTATGGGCCC
TTGATTCCAAGGGCAAATACACAACTAAATATGTGTATGATTATTTAGAGAGAGGCCTGGCCGGGTGTGACTACAGATGG
ATCTGGAAAGCTAAATTGCCTGTCAAAATCCAGATCTTCCTCTGGCAACTCTTTCAAGATGCTATCTTGACTCGAGATGT
TATGAAGCGTAGAAATTGGGCTGGCAATCCTCGCTGTTCGTTTTGTGATTGTAGAGAAACATATCTACATTTATTCTTTC
TTTGCTCTGTGGCAAGGATAGCTTGGCGCATAGTTGCGGCTTTGCTTGGCACAGATCTTTGTCCTAACAACCTGTGTCAA
TTTTATTCTTGGTGCTATGCTTTCCTCCCTCAGGGGAG-CGATATTTCACGATGGGCCTAGCGGCTATATGCTGGGCTAT
TTGGAATCGCAGAAATCAAGCTACTTTTGAGTTTAAGA---TGTCATCTTCTTTTGAGATTGTCTTTACTGCATGTATGC
ATCTATCTTACAGGGCAGGGCTTCTGAAAGGCGA----------------------------------------------
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---------------------------------------------
>chr4A_4
---TCGATATCTTAAATGTTGTGATTCATGGATTGGTAATTCTGCCTCGTCTGGTGGGAGATTAACTTTGTTGAATTCAT
CCCTCTCGAGCATTGCTTATTATTATATGTCAATGTTCCTACTTTCTAAGACATTTATCGAGAGACTCGATAAATATCGT
CGTAAGTTTTTCTGGTGTGGAGGGAGAGGTAAAAAGCGTTATTATCTGGTTAAATGGACCAGGGTGTGCCGATCTAAGAA
TAAGGGTGGGCTGGGGGTGAAAGATCTTCACAAACAGAATATCTCACTATTAGCAAAATGGTGGTGGAAGTTAGATACAG
GAGAGGGGCTGTGGCAAGATGTGGTAAGGGCAAAATACCTTAAGAACAATTCACTAGCTGCTGTGAAAGCGAAATTTCAT
GATTCCCCTGTATGGAAAGCACTACTTAAAGTAAAAGAGATGTATATGGCTGGAAGGAAGGTGATTGTCAATAATGGCAA
TGTTGCCAGGTTGTGGCATGATCCCATTGGCACTCACCAGCCTTTGGGTGTCACTTATCCGACCCTGTTCAGTATCGCTA
ATTATCAGGACGATACTATTGCTCAATTTATCAAACCGTGCTAGTGGAGATATATTCAGACGCAGACTGAATGCAGACCT
GAGCTGTCAGTTTAGTGAGGTTAAGAAAATTATTGATGGAATTGACGCCTCGGCTGGTCCAGATAAGATTGTGTGGGGTG
CTGGGCCCAACGGCAAATATACCACTAAATCCATGTATTCTTACCTGGAGAAAGATCTTACTGGTTGTGACTATAGATAG
ATTTGGAGGGCTAGATTACCTACCAAAATCCAGATTTTCCTTTGGCAACTCTTCCAGGATGCCGTTCTGACTAGGGATG-
-------------------GCCGGCAATCCCAGGTGTTCTTTCTGTGTTTGCAGAGAAACCTATTTACATCTGTTCTTTC
TTTGCCCAGTGGCAAGGGTTGCCTGGCGCACGGTTGGGGCGATGTTTGGGACTGATTTATGTCCCAATAATCTATGTCAA
TTTTATTCTTGGTGCTATGCTTTTCTTCCCCAAGGGGAATGGTGCTTCACTATGGGGCTGGCGGCTATATGTTGGGCCAT
TTGGAATCGTAGAAACCAGGCTACCTTTGAATTCAAGAAAATGCCGTCTCCTTTCGAGATTGTCTTCAACGCTTGTATGC
ACTTATCTTATTGGGCAGGTCTCCTGAAGGGCGAAAGGCGAGTGGAGCTGGAGCGTGGTGCGATGATTCTGAAGGAGAAT
GCTAAAGAGATGATGAGAATCTGTGCGACTGCACATGCGGGCGATGCCGTGGAGTGATCAGCTGCTGGGATGCTA-----
-----AG-T-CACTTTTGG-A-AAACCTTTTGGAGATGCAT-GGGTCGAGACGCCAA-GACTTTGGAGAGCG-TTTTTGT
GGAGCTTTGTTTCTT--ATATTCTGCATAGCTATGATGCTTTGGTG-C-GGGATTGTAATGTGATCAGAACTTTAGTTTG
GTTAG-CGGCGTGTTGATGGTGC------GTTTTCGCCTCGTAGTGGGCGTTTTGATTGCGAGCGCTCACAGCGGGTTTC
CCTGAA-GTGCTTGATCTCGCTTTTTCCCTTTCCCTTGTTTGAACTCGGAACTGGCTGTATTTCCGTTAT-ATT-TT-AA
TGAAAAGAGGATTAGCCCGGGTCAAAAAAAAATG----------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------
>chr4A_6
-----GATATCTTAAATGTTGTGACTCGTGGACTGGCAATTCTTCCTCTTCTGGAGGGAGACTAACTCTATTGAATTCAT
CCCTCTCGAGCATTGCTTACTACTATATGTCAATGTTCCTACTTTATAAGACATTTACCAAGAGACTCGATAAATATCAT
CGTAAGTTTTTTGGGTGTGGTGGGATGGGAAAAAA-CGTTACTATCTGGTTAAATGGACTAGGGTGTGCCGATCTAAGAA
TAAATGTGGGCTGGGTGTGAAAGATCTTCACAAACAGAATATCTCACTTTTAGCAAAATGGTGGTGGAAGTTGGATACAG
GGGAGGGTTTGTGGCAAGATGTGGTGAGAGCAAAATATCTTAAGAATAGTTCACTAGCTACTGTGAAAGCAAAATTTCAT
GACTCCCTTATATGGAAAGTGCTACTT-AAGTAAAGGAGATGTATATGGCCGGGAGGAAGGTGATTGTTAATAATGGCAA
TGCTGCCAGGCTGTGGCATGACCCCATTGGCACTCACTAGCCTTTGGGCGTCACCTATCTGACCCTATTCAGTATTGCTA
ACTATCAGGACGATACTATTGCTCAATTTATA-AGACGTACTAGTGGAGATATGTTCATGCGCAGGCTGAATGCAGACCT
GAGTTGTCAGTTTGATGAGGTCAAAAAA-TTGTTAATAGTATTGATACATCGGTCGGTCCAGATAAGATTGTGTGGGAGG
CTGGGCCCAACGGCAAATATACCACCGAATCCATGTATTCTTATCTGGAGAGAGACCTTGCTGGTTGTGACTATAAATGG
ATTTGGAGGGCTACATTACCTACCAAAATCCAGATTTTCCTTTGTCAACTCTTCTAGGATGCCGTCCTGACTAGGGATGT
TATGAAACGTCGAAACTGGGTTGGCAATCCCAGGTGCTCTTTCTGTGATTGCAGAGAAACCTATCTACATCTGTTCTTTC
TTTGTCCAATGGCAAGGGTTGTCTGGCGCACTGTTGGGGCAATGCTTGGGACCGATCTATGTCCTAATAATCTATGTCAG
TTTTACTCTTGGTGTTATGCTTTTCTTCCTCAAGGGGAACGATATTTCCCTATGGGACTGTCGGCTGTATGTTGGGCCAT
TTGGAATCGTAGAAACCAGGCTACCTTTGAATTCAAGAAACTGTCATCTCCTTTCGAGATTGTTTTCAACGCATGTATGC
ACCTATCTTATTGGGCAGGTCTCCTGAAAGGCGAAAGGCGAGTGGAGCTGGAGCGTGGTGCGATGATTCTGAAGGAGAAT
GCTAAAGAGATGATGAGAATCTATGTGACTGCACACGCAGGCGACACCATGGAGTGATCAA--GATGAGATGCTG-----
-----AGAA-CA---CTGG-G-AAGCCTTTTGGAG-TGAACAGGGTCGAGACGCCAA-GTCTTTTGAGAGCA-TTTT-GT
GGAG-TTTGCCTTTG--ATGTCTTACATAACTATGTTGTCTTTGTG-C-GGA-TTGTAATGTGACCTGAACGTTAGTTTG
GTTCA-CTGCGTGTTGATGGTGCTTCAGGGTTTTCGCCTCGTAGTGGGTGTTTCGATTGCGAGCGCTCACAACAGGTTTC
CCTGAA-GTGCTTGATCTCGCTTTT--CCTTTCCCTCGTTCAAACTCGGAACTAGCTGTATTTCCGTTAT-TTT-TT-AA
TGGAAAGGGGATTAGCCCAGGTCAAAAAAA--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------
>chr5A_291
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------TAGCAAAGTGGTGGTGGAAGTTGGATACAG
GGGAGGGGTTGTGGCAAGATGTGGTGAGAGCAAAATATCTTAAGAACAGCTCGTTAGCTACTGTGAAAATAAAATTTCAT
GACTCCCCTATCTGGAAAGCCTTGTTTAAAGTAAAGGAGATGTATATGGCCGGGAGGAAAGTGATTGTCAATAATGGCAA
TGTTGCCAGGTTGTGGCATGACCCCATTGGCACCCACCCACCTCTGGGGATCACCTATCCGGCCTTGTTCAGTATTGCTA
ACCACCAGGACGATACTGTTGCTTAGTTTATG-AACCGTGCTAGTGGAGATATGTTCAGACGCAGGCTGAATATAGACCT
ATGTTATCAATTCGATGAGGTCAAAAAAATTGTTGACAACATTGACACTTCGGCTGGTCCAGATAAGATTGTGTGGGCTG
CTGGACCCAAAGGCAAATACACCACTAAATCCATGTATTCTTATCTGGAGAGAGATCTTGCTGGCTGTGACTATAAATGG
ATTTGGAGGGCCGGATTACCTACCAAAATCCAGTTTTTCCTTTGGCAGCTTTTCCAGGATGCTGTCCTAACTAGGGATGT
TATGAAGCGTCGAAACTGGGTTGGCAACCCCAGTTGTTCTTTCTGCGATTGCAGAGAAACATATCTGCATTTATTCTTTC
TCTGTCCAGTGGCAAGGGTAGCCTGGCGTACTGTGGGGGCGATGCTTGGGACCGACTTATGTCCCAACAATTTGTGCCAG
TTTTACTCTTGGTGCTATGCATTTCTTCCTCAAGGGGAACGATATTTCACTGCGGGGCTGGCGGCTATATGCTGGGCTAT
TTGGAATCGTAGAAACCAGGCTACTTTTGAATTCAAAAAATTGTCATCTTCTTTCGAGATTGTTTTCAATGCTTGTATGC
ACTTGTCTTATTGGGCGGGTCTTCTGAAGGGCGAAAGGCGAATGGAGCTGGAGCGTGGTGCGATGATTCTGAAGGAGAAC
GCTAAAGAGATGATGAGACTCTGCGCGACTGCACACGCGGGTGACGCCGTGGAGTGATCAG--GCCGAGATGCC------
-----AAAGTCA---TTTG-G-AAGCCTTTTGGAG-TGATC-GGGCTGAGATATCAA-GGCATTTGGAAGCA-TTTT-GT
GGAG-TCTGTTCTCCCCATGTTCTACATAACTGTGTTGCCTTTGTG-T-GGG-TTGTAATGTGGTCTGAAC-TTAGTTTG
GTTCG-TTGCGTGTTGATGGTGCTTCACGGTTTTCGCCTTGTAGTGGGCGTTTCGATTGCGAGCGCCCACAGCGGGTTTC
CCTGAA-GTGCTTGACCTCGCTTTTTCCCTTTCCCTTGTTTGAATTTGGAAATGGCTGTATTTCCGTTAT-ATT-TT-AA
TGAAAAGGGGATTAGCCCGGGTCCAAAAAAAATGTGC-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------
>chr5A_1038
AATATTAGTA----------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------CTTGGTGCTATGCTTTTCTTCCTCAAGGGGAATGGTGCTTCACTATGGGGCTGGCGGCTGTATGTTGGGCCAT
CTGGAATCGTAGAAACCAGGCTACTTTTGAATTTAAGAAAATGTCATCTCCTTTCGAGATTGTTTTCAACGCTTGTATGC
ACCTATCTTATTGGGCAGGTCTCCTGTAGGGCGAAAGACGAGTGGAACTGGAGCGTGGTGCAATGATTATGAAGGACAGT
GCTAAAGAGATGATGAGAATCTACGCGACTGCACACACGGGCGAGACCGTGGAGTGATTCA--GCTGC------TGGGAG
GCCTGAG-A-CA---TTGC-GGAAGCCTTCTAAAG-TGATC-GATTTGAGACACCAAAGACTCTGGAGAGCGTTTGT-GT
GGAG-TTTGTTTCTT--TTGTTCTGCATAACTGAGATGCCTTGGTG-CGGGG-TTGTATTGTGATCTGAACTTTAGTTTG
GTTCG-ATGCGTGTTGATGGTGCTTCAGGGTTTTCGCCTCGTAGTGGGCGTTTCGATTGCGAGCGCTCACAGCGGGTTTT
CCTGAA-GTGCTTGATCCCGCTGTTTCCCTTTCCCTTGTTTGAACTCGGAACTGGCTGTATTTCCGTTAT-ATT-TTCAA
TGGAAAGGGGATTAGCCCGGGTCAAAAAAAA-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------
>chr4A_1038
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------AA
TTTTACTCTTGGTGCTATGCTTTTCTTCCTCAAGGGGAATGGTGCTTCACTATGGGGCTGGCGGCTGTATGCTGGGCCAT
TTGGAATCGTAGAAACCAGGCTACTTTTGAATTTAAGAAAATGTCATCTCTTTTCGAGATTGTTTTCAACGCTTGTATGC
AGCTATCTTATTGGGCAGGTCTCCTGAAGGGCGAAAGACGAGTGGAACTGGAGCGTGGTGCGATGATTCGGAAGGAGAAT
GCTAAAGAGATGATGAGAATCTACGCGACTGCACACACGGGCGAGACCATGGAGTGATTCA--GCTGC------TGGGAG
GCCTGAG-A-CA---TTGC-G-AAGCCTTTTGAAG-TGATC-GATTTGAGACACCAAAGACTCTGGAGAGCGTTTGT-GT
GGAG-TTTGTTTCTT--TTGTTCTGCATAACTGTGATGCCTTGATG-CGGGG-TTGTATTGTGATCTGAACTTTAGTTTG
GTGCG-ATGCGTGTTGATGGTGCTTCAGGGTTTTCGCCTCGTAGTGAGCGTTTCGATTGCGAGCGCTCACAGCGGGTTTC
CCTGAA-GTGCTTGATCTCGCTGTTTCCCTTTCCCTTGTTTGAACTCAGAACTGGTTGTATTTCCGTTATATTT-TT-AA
TGGAAAGGGGATTAGCCTGGGTCAAAAAAAA-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------
>SNPs
--------------------------------------------------------S-----------------------
------------------------S-------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------S-------------------------------
--------------------------------------------------------------------------------
------------------------------S-------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------S--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------S------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------S---------------------------S--------------------------------
-----------------------------------------------S------S-------S-----------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------S-
--------------------------------------------------------------------------------
------------------------------------S-------------------------------------------
S-------------------------------------------------------------------------------
-------------------------------S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_57
-------------------------------------AATTCTGCCTCGTCTGGTGA-----------------------
--------------------------------------------------------------------------------
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---------------------------------------------
>reverse_1738
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------GAGTGGGACTCTTGACGCAA---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------
