Multiple sequence alignment - TraesCS5A01G392200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G392200 chr5A 100.000 2264 0 0 1 2264 588455885 588453622 0.000000e+00 4181.0
1 TraesCS5A01G392200 chr5A 90.456 241 20 3 644 882 22284012 22284251 4.690000e-82 315.0
2 TraesCS5A01G392200 chr5A 88.462 260 19 3 6 265 484667762 484667514 1.020000e-78 303.0
3 TraesCS5A01G392200 chr5A 89.610 77 8 0 468 544 484629935 484630011 5.150000e-17 99.0
4 TraesCS5A01G392200 chr5D 95.293 1126 52 1 644 1768 527486626 527487751 0.000000e+00 1784.0
5 TraesCS5A01G392200 chr5D 92.366 393 28 2 6 397 527486085 527486476 1.960000e-155 558.0
6 TraesCS5A01G392200 chr4A 90.854 1312 92 8 469 1768 598516082 598517377 0.000000e+00 1733.0
7 TraesCS5A01G392200 chr4A 88.824 340 34 4 76 414 598515534 598515870 4.500000e-112 414.0
8 TraesCS5A01G392200 chr1A 91.833 1151 83 6 552 1691 259893586 259892436 0.000000e+00 1594.0
9 TraesCS5A01G392200 chr1A 84.026 313 21 5 6 317 259893967 259893683 7.970000e-70 274.0
10 TraesCS5A01G392200 chr3D 93.346 1052 66 4 642 1691 230694460 230695509 0.000000e+00 1552.0
11 TraesCS5A01G392200 chr3D 89.711 311 22 4 9 317 230648024 230648326 2.730000e-104 388.0
12 TraesCS5A01G392200 chr3D 87.781 311 28 5 9 317 230706838 230707140 2.770000e-94 355.0
13 TraesCS5A01G392200 chr3D 96.667 90 3 0 1680 1769 230593603 230593692 1.400000e-32 150.0
14 TraesCS5A01G392200 chr3D 95.506 89 3 1 1680 1768 486681206 486681119 8.430000e-30 141.0
15 TraesCS5A01G392200 chr3D 88.696 115 13 0 469 583 486682850 486682736 8.430000e-30 141.0
16 TraesCS5A01G392200 chr3D 83.871 62 9 1 559 620 466806105 466806165 8.730000e-05 58.4
17 TraesCS5A01G392200 chr4B 89.303 1234 108 5 469 1691 612515384 612514164 0.000000e+00 1526.0
18 TraesCS5A01G392200 chr4B 91.093 494 31 8 1769 2252 135202105 135202595 0.000000e+00 656.0
19 TraesCS5A01G392200 chr4B 89.606 279 18 5 6 282 612515914 612515645 5.990000e-91 344.0
20 TraesCS5A01G392200 chr4B 78.477 302 54 8 101 395 519580578 519580281 1.070000e-43 187.0
21 TraesCS5A01G392200 chr4B 92.208 77 6 0 468 544 612515386 612515462 2.380000e-20 110.0
22 TraesCS5A01G392200 chr4B 95.082 61 3 0 493 553 612515557 612515497 1.850000e-16 97.1
23 TraesCS5A01G392200 chr7B 88.631 1205 124 10 499 1691 65835489 65836692 0.000000e+00 1454.0
24 TraesCS5A01G392200 chr7B 89.091 385 35 1 12 396 685906583 685906960 2.630000e-129 472.0
25 TraesCS5A01G392200 chr7B 96.512 86 3 0 1680 1765 685957158 685957243 2.340000e-30 143.0
26 TraesCS5A01G392200 chr7B 74.312 327 59 19 581 891 180479789 180479472 5.110000e-22 115.0
27 TraesCS5A01G392200 chr2B 87.480 1246 124 18 468 1691 40122321 40123556 0.000000e+00 1408.0
28 TraesCS5A01G392200 chr2B 86.347 1106 110 14 468 1538 609251098 609252197 0.000000e+00 1168.0
29 TraesCS5A01G392200 chr2B 87.742 310 32 5 11 318 609250375 609250680 7.690000e-95 357.0
30 TraesCS5A01G392200 chr2B 84.516 310 44 4 10 318 40121721 40122027 1.020000e-78 303.0
31 TraesCS5A01G392200 chr2B 96.512 86 3 0 1680 1765 730044407 730044492 2.340000e-30 143.0
32 TraesCS5A01G392200 chr2B 74.312 327 46 27 559 857 139370000 139370316 1.110000e-18 104.0
33 TraesCS5A01G392200 chr2B 100.000 34 0 0 588 621 139396530 139396497 1.880000e-06 63.9
34 TraesCS5A01G392200 chr6D 92.531 723 54 0 969 1691 43206470 43205748 0.000000e+00 1037.0
35 TraesCS5A01G392200 chr6D 91.039 491 29 5 1769 2252 421596960 421597442 0.000000e+00 649.0
36 TraesCS5A01G392200 chr6D 83.067 313 39 2 6 318 380049208 380048910 2.870000e-69 272.0
37 TraesCS5A01G392200 chr6D 93.151 73 5 0 470 542 421593001 421592929 8.550000e-20 108.0
38 TraesCS5A01G392200 chrUn 91.650 491 31 4 1769 2252 89815817 89815330 0.000000e+00 671.0
39 TraesCS5A01G392200 chrUn 91.650 491 31 4 1769 2252 335983222 335983709 0.000000e+00 671.0
40 TraesCS5A01G392200 chrUn 91.650 491 31 4 1769 2252 391479925 391480412 0.000000e+00 671.0
41 TraesCS5A01G392200 chrUn 91.650 491 31 4 1769 2252 391545236 391545723 0.000000e+00 671.0
42 TraesCS5A01G392200 chr7D 91.498 494 32 4 1766 2252 175861215 175861705 0.000000e+00 671.0
43 TraesCS5A01G392200 chr4D 91.134 485 39 2 1769 2252 503121115 503121596 0.000000e+00 654.0
44 TraesCS5A01G392200 chr2D 91.039 491 34 4 1769 2252 6973069 6972582 0.000000e+00 654.0
45 TraesCS5A01G392200 chr2D 90.498 221 19 2 63 282 122825694 122825475 7.910000e-75 291.0
46 TraesCS5A01G392200 chr5B 87.468 391 34 5 9 393 415419707 415419326 9.600000e-119 436.0
47 TraesCS5A01G392200 chr5B 88.158 76 8 1 470 544 338721269 338721194 3.100000e-14 89.8
48 TraesCS5A01G392200 chr5B 100.000 34 0 0 588 621 407224444 407224477 1.880000e-06 63.9
49 TraesCS5A01G392200 chr3B 90.661 257 16 2 6 262 677722567 677722815 3.600000e-88 335.0
50 TraesCS5A01G392200 chr3B 89.610 77 8 0 468 544 217319736 217319660 5.150000e-17 99.0
51 TraesCS5A01G392200 chr3B 81.481 81 10 4 544 622 708113422 708113345 6.750000e-06 62.1
52 TraesCS5A01G392200 chr7A 95.506 89 4 0 1680 1768 188643644 188643732 2.340000e-30 143.0
53 TraesCS5A01G392200 chr1D 95.506 89 4 0 1680 1768 465921430 465921518 2.340000e-30 143.0
54 TraesCS5A01G392200 chr1D 90.789 76 5 2 470 544 476469907 476469981 1.430000e-17 100.0
55 TraesCS5A01G392200 chr1B 95.506 89 4 0 1680 1768 642719639 642719727 2.340000e-30 143.0
56 TraesCS5A01G392200 chr6B 74.110 309 52 21 588 879 47284616 47284913 3.980000e-18 102.0
57 TraesCS5A01G392200 chr6B 81.944 72 11 1 551 622 672896973 672897042 2.430000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G392200 chr5A 588453622 588455885 2263 True 4181.0 4181 100.000000 1 2264 1 chr5A.!!$R2 2263
1 TraesCS5A01G392200 chr5D 527486085 527487751 1666 False 1171.0 1784 93.829500 6 1768 2 chr5D.!!$F1 1762
2 TraesCS5A01G392200 chr4A 598515534 598517377 1843 False 1073.5 1733 89.839000 76 1768 2 chr4A.!!$F1 1692
3 TraesCS5A01G392200 chr1A 259892436 259893967 1531 True 934.0 1594 87.929500 6 1691 2 chr1A.!!$R1 1685
4 TraesCS5A01G392200 chr3D 230694460 230695509 1049 False 1552.0 1552 93.346000 642 1691 1 chr3D.!!$F3 1049
5 TraesCS5A01G392200 chr4B 612514164 612515914 1750 True 655.7 1526 91.330333 6 1691 3 chr4B.!!$R2 1685
6 TraesCS5A01G392200 chr7B 65835489 65836692 1203 False 1454.0 1454 88.631000 499 1691 1 chr7B.!!$F1 1192
7 TraesCS5A01G392200 chr2B 40121721 40123556 1835 False 855.5 1408 85.998000 10 1691 2 chr2B.!!$F3 1681
8 TraesCS5A01G392200 chr2B 609250375 609252197 1822 False 762.5 1168 87.044500 11 1538 2 chr2B.!!$F4 1527
9 TraesCS5A01G392200 chr6D 43205748 43206470 722 True 1037.0 1037 92.531000 969 1691 1 chr6D.!!$R1 722

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
327 681 0.100503 GCGTTGCACACAGGAAAACT 59.899 50.0 0.0 0.0 0.0 2.66 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2045 2574 0.03601 CCTTGATCACCGGTCTTGCT 60.036 55.0 2.59 0.0 0.0 3.91 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
57 59 5.664457 TGTGCTATGAGTCCTAAATGACTG 58.336 41.667 0.00 0.00 45.41 3.51
81 83 5.008217 GTGTGCTATGTGTTTTGGACAACTA 59.992 40.000 0.00 0.00 40.65 2.24
167 169 7.458397 TGTCTCCTTTATGTGTTTTGGACTAT 58.542 34.615 0.00 0.00 0.00 2.12
302 635 0.455005 GTCTAGTGTAGCACCCGACC 59.545 60.000 7.06 0.00 34.49 4.79
311 644 3.467226 CACCCGACCCATAGGCGT 61.467 66.667 0.00 0.00 36.11 5.68
327 681 0.100503 GCGTTGCACACAGGAAAACT 59.899 50.000 0.00 0.00 0.00 2.66
335 689 3.003378 GCACACAGGAAAACTTACTGGAC 59.997 47.826 3.75 0.00 36.57 4.02
360 715 2.460669 TCTGTTGCTCTCTGGATAGCA 58.539 47.619 6.58 6.58 46.59 3.49
377 732 1.068083 CAGTGTCCAGACGTGCAGT 59.932 57.895 0.00 0.00 0.00 4.40
386 741 1.004918 GACGTGCAGTGCCTAAGGT 60.005 57.895 13.72 5.78 0.00 3.50
396 751 1.835712 GCCTAAGGTAGGGGCGCTA 60.836 63.158 7.64 7.26 46.32 4.26
397 752 1.192803 GCCTAAGGTAGGGGCGCTAT 61.193 60.000 14.77 1.52 46.32 2.97
399 754 2.100989 CCTAAGGTAGGGGCGCTATAG 58.899 57.143 14.77 11.69 42.42 1.31
403 758 2.736347 AGGTAGGGGCGCTATAGTATG 58.264 52.381 14.77 0.00 0.00 2.39
405 760 2.165845 GGTAGGGGCGCTATAGTATGTG 59.834 54.545 14.77 0.00 0.00 3.21
406 761 0.608640 AGGGGCGCTATAGTATGTGC 59.391 55.000 7.64 8.66 38.78 4.57
412 767 1.783284 GCTATAGTATGTGCGCTGCA 58.217 50.000 9.73 8.47 35.60 4.41
452 853 1.338389 GCGGTGCACCCTAACTTAGAA 60.338 52.381 29.95 0.00 0.00 2.10
455 856 3.435671 CGGTGCACCCTAACTTAGAAAAG 59.564 47.826 29.95 6.78 38.77 2.27
525 1005 0.462225 CATGCCAGTCCAGAGAGCAG 60.462 60.000 0.00 0.00 36.80 4.24
533 1013 1.134965 GTCCAGAGAGCAGCATAACGT 60.135 52.381 0.00 0.00 0.00 3.99
556 1036 1.565305 CAGTAGCCATTCGAGCTGTC 58.435 55.000 7.84 1.98 41.71 3.51
730 1247 5.267587 CCCCTCTCAAATCCTTCTCAAATT 58.732 41.667 0.00 0.00 0.00 1.82
753 1279 3.610911 GGAGATTTTGTCCGTGGATCTT 58.389 45.455 0.00 0.00 0.00 2.40
787 1313 4.389264 CCTCCCTTAAGGTAATCTCCTCCT 60.389 50.000 20.22 0.00 36.74 3.69
1026 1553 0.175760 CATCCGGTTCCATGACGAGT 59.824 55.000 0.00 0.00 0.00 4.18
1068 1595 0.038166 ACATGCCGAACAAGTGGGAT 59.962 50.000 0.00 0.00 36.66 3.85
1076 1603 2.627945 GAACAAGTGGGATGACGCATA 58.372 47.619 0.00 0.00 40.82 3.14
1091 1618 2.747446 ACGCATATTTGGACAAGGTGAC 59.253 45.455 0.00 0.00 0.00 3.67
1177 1704 1.671850 GCCGAAAGAAGTCATGGACGA 60.672 52.381 0.00 0.00 37.67 4.20
1227 1754 6.473455 CGAACTATGCTTATGATCATGCGATA 59.527 38.462 18.72 12.09 29.66 2.92
1265 1792 1.485066 CCAACCACCGGTAAGCTAGAT 59.515 52.381 6.87 0.00 33.12 1.98
1270 1797 3.635836 ACCACCGGTAAGCTAGATAAGTC 59.364 47.826 6.87 0.00 32.11 3.01
1489 2018 1.745264 GAGAGGATGGAGCGGAAGG 59.255 63.158 0.00 0.00 0.00 3.46
1498 2027 1.115467 GGAGCGGAAGGAATGAGAGA 58.885 55.000 0.00 0.00 0.00 3.10
1511 2040 0.115152 TGAGAGAAGGAGAGGGCACA 59.885 55.000 0.00 0.00 0.00 4.57
1525 2054 1.410882 GGGCACACCAAGCAAAACTTA 59.589 47.619 0.00 0.00 36.04 2.24
1548 2077 0.693767 ATGAGGAGGAGAGGGCAAGG 60.694 60.000 0.00 0.00 0.00 3.61
1616 2145 0.850883 AGGAAGGGGAAATGGCCTCA 60.851 55.000 3.32 0.00 0.00 3.86
1662 2191 0.320771 GTGCACTCGTCATGGAACCT 60.321 55.000 10.32 0.00 0.00 3.50
1768 2297 4.893424 ACTTGTGTTTGCGAAGTTGTAT 57.107 36.364 0.00 0.00 0.00 2.29
1769 2298 5.243426 ACTTGTGTTTGCGAAGTTGTATT 57.757 34.783 0.00 0.00 0.00 1.89
1770 2299 5.270853 ACTTGTGTTTGCGAAGTTGTATTC 58.729 37.500 0.00 0.00 0.00 1.75
1771 2300 5.065988 ACTTGTGTTTGCGAAGTTGTATTCT 59.934 36.000 0.00 0.00 0.00 2.40
1772 2301 5.493133 TGTGTTTGCGAAGTTGTATTCTT 57.507 34.783 0.00 0.00 0.00 2.52
1773 2302 5.885881 TGTGTTTGCGAAGTTGTATTCTTT 58.114 33.333 0.00 0.00 0.00 2.52
1774 2303 5.968848 TGTGTTTGCGAAGTTGTATTCTTTC 59.031 36.000 0.00 0.00 0.00 2.62
1775 2304 5.398416 GTGTTTGCGAAGTTGTATTCTTTCC 59.602 40.000 0.00 0.00 0.00 3.13
1776 2305 5.298276 TGTTTGCGAAGTTGTATTCTTTCCT 59.702 36.000 0.00 0.00 0.00 3.36
1777 2306 5.356882 TTGCGAAGTTGTATTCTTTCCTG 57.643 39.130 0.00 0.00 0.00 3.86
1778 2307 4.385825 TGCGAAGTTGTATTCTTTCCTGT 58.614 39.130 0.00 0.00 0.00 4.00
1779 2308 4.213270 TGCGAAGTTGTATTCTTTCCTGTG 59.787 41.667 0.00 0.00 0.00 3.66
1780 2309 4.378459 GCGAAGTTGTATTCTTTCCTGTGG 60.378 45.833 0.00 0.00 0.00 4.17
1781 2310 4.994852 CGAAGTTGTATTCTTTCCTGTGGA 59.005 41.667 0.00 0.00 0.00 4.02
1782 2311 5.120830 CGAAGTTGTATTCTTTCCTGTGGAG 59.879 44.000 0.00 0.00 31.21 3.86
1783 2312 5.568620 AGTTGTATTCTTTCCTGTGGAGT 57.431 39.130 0.00 0.00 31.21 3.85
1784 2313 5.552178 AGTTGTATTCTTTCCTGTGGAGTC 58.448 41.667 0.00 0.00 31.21 3.36
1785 2314 5.071788 AGTTGTATTCTTTCCTGTGGAGTCA 59.928 40.000 0.00 0.00 31.21 3.41
1786 2315 5.152623 TGTATTCTTTCCTGTGGAGTCAG 57.847 43.478 0.00 0.00 31.21 3.51
1798 2327 4.906618 TGTGGAGTCAGGAAATAAAGTCC 58.093 43.478 0.00 0.00 35.17 3.85
1799 2328 4.597507 TGTGGAGTCAGGAAATAAAGTCCT 59.402 41.667 0.00 0.00 46.92 3.85
1800 2329 5.179533 GTGGAGTCAGGAAATAAAGTCCTC 58.820 45.833 0.00 0.00 44.00 3.71
1801 2330 4.844085 TGGAGTCAGGAAATAAAGTCCTCA 59.156 41.667 0.00 0.00 44.00 3.86
1802 2331 5.309543 TGGAGTCAGGAAATAAAGTCCTCAA 59.690 40.000 0.00 0.00 44.00 3.02
1803 2332 5.877564 GGAGTCAGGAAATAAAGTCCTCAAG 59.122 44.000 0.00 0.00 44.00 3.02
1804 2333 6.295916 GGAGTCAGGAAATAAAGTCCTCAAGA 60.296 42.308 0.00 0.00 44.00 3.02
1805 2334 6.468543 AGTCAGGAAATAAAGTCCTCAAGAC 58.531 40.000 0.00 0.00 44.00 3.01
1816 2345 4.002906 GTCCTCAAGACAATGTACCACA 57.997 45.455 0.00 0.00 45.55 4.17
1817 2346 4.579869 GTCCTCAAGACAATGTACCACAT 58.420 43.478 0.00 0.00 45.55 3.21
1818 2347 5.730550 GTCCTCAAGACAATGTACCACATA 58.269 41.667 0.00 0.00 45.55 2.29
1819 2348 6.349300 GTCCTCAAGACAATGTACCACATAT 58.651 40.000 0.00 0.00 45.55 1.78
1820 2349 7.497595 GTCCTCAAGACAATGTACCACATATA 58.502 38.462 0.00 0.00 45.55 0.86
1821 2350 7.653713 GTCCTCAAGACAATGTACCACATATAG 59.346 40.741 0.00 0.00 45.55 1.31
1822 2351 7.563556 TCCTCAAGACAATGTACCACATATAGA 59.436 37.037 0.00 0.00 37.97 1.98
1823 2352 7.653713 CCTCAAGACAATGTACCACATATAGAC 59.346 40.741 0.00 0.00 37.97 2.59
1824 2353 8.073467 TCAAGACAATGTACCACATATAGACA 57.927 34.615 0.00 0.00 37.97 3.41
1825 2354 7.979537 TCAAGACAATGTACCACATATAGACAC 59.020 37.037 0.00 0.00 37.97 3.67
1826 2355 6.504398 AGACAATGTACCACATATAGACACG 58.496 40.000 0.00 0.00 37.97 4.49
1827 2356 6.320418 AGACAATGTACCACATATAGACACGA 59.680 38.462 0.00 0.00 37.97 4.35
1828 2357 6.504398 ACAATGTACCACATATAGACACGAG 58.496 40.000 0.00 0.00 37.97 4.18
1829 2358 4.563337 TGTACCACATATAGACACGAGC 57.437 45.455 0.00 0.00 0.00 5.03
1830 2359 3.949113 TGTACCACATATAGACACGAGCA 59.051 43.478 0.00 0.00 0.00 4.26
1831 2360 4.583073 TGTACCACATATAGACACGAGCAT 59.417 41.667 0.00 0.00 0.00 3.79
1832 2361 3.982475 ACCACATATAGACACGAGCATG 58.018 45.455 0.00 0.00 0.00 4.06
1833 2362 3.384789 ACCACATATAGACACGAGCATGT 59.615 43.478 0.00 0.00 34.78 3.21
1834 2363 3.737774 CCACATATAGACACGAGCATGTG 59.262 47.826 6.78 6.78 45.41 3.21
1840 2369 4.994744 CACGAGCATGTGTCTGGA 57.005 55.556 0.00 0.00 35.12 3.86
1841 2370 3.448267 CACGAGCATGTGTCTGGAT 57.552 52.632 0.00 0.00 35.12 3.41
1842 2371 1.284657 CACGAGCATGTGTCTGGATC 58.715 55.000 0.00 0.00 35.12 3.36
1843 2372 0.897621 ACGAGCATGTGTCTGGATCA 59.102 50.000 0.00 0.00 0.00 2.92
1844 2373 1.284657 CGAGCATGTGTCTGGATCAC 58.715 55.000 0.00 0.00 36.48 3.06
1853 2382 5.682234 TGTGTCTGGATCACATTATCAGT 57.318 39.130 0.00 0.00 40.26 3.41
1854 2383 5.422145 TGTGTCTGGATCACATTATCAGTG 58.578 41.667 0.00 0.00 40.26 3.66
1855 2384 4.813161 GTGTCTGGATCACATTATCAGTGG 59.187 45.833 0.00 0.00 37.58 4.00
1856 2385 3.812053 GTCTGGATCACATTATCAGTGGC 59.188 47.826 0.00 0.00 37.58 5.01
1857 2386 3.455543 TCTGGATCACATTATCAGTGGCA 59.544 43.478 0.00 0.00 37.58 4.92
1858 2387 4.103627 TCTGGATCACATTATCAGTGGCAT 59.896 41.667 0.00 0.00 37.58 4.40
1859 2388 4.392047 TGGATCACATTATCAGTGGCATC 58.608 43.478 0.00 0.00 37.58 3.91
1860 2389 3.755378 GGATCACATTATCAGTGGCATCC 59.245 47.826 0.00 0.00 34.95 3.51
1861 2390 2.837498 TCACATTATCAGTGGCATCCG 58.163 47.619 0.00 0.00 37.58 4.18
1862 2391 1.265095 CACATTATCAGTGGCATCCGC 59.735 52.381 0.00 0.00 33.43 5.54
1863 2392 1.134128 ACATTATCAGTGGCATCCGCA 60.134 47.619 0.00 0.00 41.24 5.69
1864 2393 1.534163 CATTATCAGTGGCATCCGCAG 59.466 52.381 0.00 0.00 41.24 5.18
1878 2407 2.812178 GCAGGGCAATGCGCAAAG 60.812 61.111 23.85 11.62 44.06 2.77
1879 2408 2.652530 CAGGGCAATGCGCAAAGT 59.347 55.556 23.85 0.00 44.06 2.66
1880 2409 1.005867 CAGGGCAATGCGCAAAGTT 60.006 52.632 23.85 0.01 44.06 2.66
1881 2410 1.010419 CAGGGCAATGCGCAAAGTTC 61.010 55.000 23.85 4.59 44.06 3.01
1882 2411 1.737735 GGGCAATGCGCAAAGTTCC 60.738 57.895 17.11 11.52 45.17 3.62
1883 2412 1.290009 GGCAATGCGCAAAGTTCCT 59.710 52.632 17.11 0.00 45.17 3.36
1884 2413 0.319813 GGCAATGCGCAAAGTTCCTT 60.320 50.000 17.11 0.00 45.17 3.36
1885 2414 1.501169 GCAATGCGCAAAGTTCCTTT 58.499 45.000 17.11 0.00 41.79 3.11
1896 2425 4.568152 AAAGTTCCTTTGAATCCACGTG 57.432 40.909 9.08 9.08 31.98 4.49
1897 2426 3.485463 AGTTCCTTTGAATCCACGTGA 57.515 42.857 19.30 3.36 31.98 4.35
1898 2427 3.815809 AGTTCCTTTGAATCCACGTGAA 58.184 40.909 19.30 0.00 31.98 3.18
1899 2428 4.204012 AGTTCCTTTGAATCCACGTGAAA 58.796 39.130 19.30 8.16 31.98 2.69
1900 2429 4.275936 AGTTCCTTTGAATCCACGTGAAAG 59.724 41.667 19.30 17.18 31.98 2.62
1901 2430 2.552315 TCCTTTGAATCCACGTGAAAGC 59.448 45.455 19.30 4.29 0.00 3.51
1902 2431 2.293122 CCTTTGAATCCACGTGAAAGCA 59.707 45.455 19.30 7.08 0.00 3.91
1903 2432 3.558505 CTTTGAATCCACGTGAAAGCAG 58.441 45.455 19.30 0.00 0.00 4.24
1904 2433 0.874390 TGAATCCACGTGAAAGCAGC 59.126 50.000 19.30 0.00 0.00 5.25
1905 2434 1.160137 GAATCCACGTGAAAGCAGCT 58.840 50.000 19.30 0.00 0.00 4.24
1906 2435 1.129437 GAATCCACGTGAAAGCAGCTC 59.871 52.381 19.30 0.00 0.00 4.09
1907 2436 0.674895 ATCCACGTGAAAGCAGCTCC 60.675 55.000 19.30 0.00 0.00 4.70
1908 2437 2.671177 CCACGTGAAAGCAGCTCCG 61.671 63.158 19.30 0.00 0.00 4.63
1909 2438 2.357517 ACGTGAAAGCAGCTCCGG 60.358 61.111 0.00 0.00 0.00 5.14
1910 2439 3.793144 CGTGAAAGCAGCTCCGGC 61.793 66.667 0.00 0.00 39.06 6.13
1916 2445 2.417558 AAAGCAGCTCCGGCTCCTTT 62.418 55.000 0.00 0.00 44.90 3.11
1917 2446 2.811542 AAGCAGCTCCGGCTCCTTTC 62.812 60.000 0.00 0.00 43.34 2.62
1920 2449 2.671682 GCTCCGGCTCCTTTCCTT 59.328 61.111 0.00 0.00 35.22 3.36
1921 2450 1.002011 GCTCCGGCTCCTTTCCTTT 60.002 57.895 0.00 0.00 35.22 3.11
1922 2451 1.027255 GCTCCGGCTCCTTTCCTTTC 61.027 60.000 0.00 0.00 35.22 2.62
1923 2452 0.393132 CTCCGGCTCCTTTCCTTTCC 60.393 60.000 0.00 0.00 0.00 3.13
1924 2453 0.840722 TCCGGCTCCTTTCCTTTCCT 60.841 55.000 0.00 0.00 0.00 3.36
1925 2454 0.038310 CCGGCTCCTTTCCTTTCCTT 59.962 55.000 0.00 0.00 0.00 3.36
1926 2455 1.454201 CGGCTCCTTTCCTTTCCTTC 58.546 55.000 0.00 0.00 0.00 3.46
1927 2456 1.003696 CGGCTCCTTTCCTTTCCTTCT 59.996 52.381 0.00 0.00 0.00 2.85
1928 2457 2.553247 CGGCTCCTTTCCTTTCCTTCTT 60.553 50.000 0.00 0.00 0.00 2.52
1929 2458 3.085533 GGCTCCTTTCCTTTCCTTCTTC 58.914 50.000 0.00 0.00 0.00 2.87
1930 2459 3.245087 GGCTCCTTTCCTTTCCTTCTTCT 60.245 47.826 0.00 0.00 0.00 2.85
1931 2460 4.402829 GCTCCTTTCCTTTCCTTCTTCTT 58.597 43.478 0.00 0.00 0.00 2.52
1932 2461 4.457603 GCTCCTTTCCTTTCCTTCTTCTTC 59.542 45.833 0.00 0.00 0.00 2.87
1933 2462 5.747545 GCTCCTTTCCTTTCCTTCTTCTTCT 60.748 44.000 0.00 0.00 0.00 2.85
1934 2463 6.267492 TCCTTTCCTTTCCTTCTTCTTCTT 57.733 37.500 0.00 0.00 0.00 2.52
1935 2464 6.299922 TCCTTTCCTTTCCTTCTTCTTCTTC 58.700 40.000 0.00 0.00 0.00 2.87
1936 2465 6.101881 TCCTTTCCTTTCCTTCTTCTTCTTCT 59.898 38.462 0.00 0.00 0.00 2.85
1937 2466 6.429692 CCTTTCCTTTCCTTCTTCTTCTTCTC 59.570 42.308 0.00 0.00 0.00 2.87
1938 2467 6.755542 TTCCTTTCCTTCTTCTTCTTCTCT 57.244 37.500 0.00 0.00 0.00 3.10
1939 2468 6.755542 TCCTTTCCTTCTTCTTCTTCTCTT 57.244 37.500 0.00 0.00 0.00 2.85
1940 2469 6.764379 TCCTTTCCTTCTTCTTCTTCTCTTC 58.236 40.000 0.00 0.00 0.00 2.87
1941 2470 6.556874 TCCTTTCCTTCTTCTTCTTCTCTTCT 59.443 38.462 0.00 0.00 0.00 2.85
1942 2471 6.873605 CCTTTCCTTCTTCTTCTTCTCTTCTC 59.126 42.308 0.00 0.00 0.00 2.87
1943 2472 5.993748 TCCTTCTTCTTCTTCTCTTCTCC 57.006 43.478 0.00 0.00 0.00 3.71
1944 2473 5.650283 TCCTTCTTCTTCTTCTCTTCTCCT 58.350 41.667 0.00 0.00 0.00 3.69
1945 2474 6.081356 TCCTTCTTCTTCTTCTCTTCTCCTT 58.919 40.000 0.00 0.00 0.00 3.36
1946 2475 6.210584 TCCTTCTTCTTCTTCTCTTCTCCTTC 59.789 42.308 0.00 0.00 0.00 3.46
1947 2476 5.993748 TCTTCTTCTTCTCTTCTCCTTCC 57.006 43.478 0.00 0.00 0.00 3.46
1948 2477 5.650283 TCTTCTTCTTCTCTTCTCCTTCCT 58.350 41.667 0.00 0.00 0.00 3.36
1949 2478 5.714806 TCTTCTTCTTCTCTTCTCCTTCCTC 59.285 44.000 0.00 0.00 0.00 3.71
1950 2479 5.269554 TCTTCTTCTCTTCTCCTTCCTCT 57.730 43.478 0.00 0.00 0.00 3.69
1951 2480 6.395780 TCTTCTTCTCTTCTCCTTCCTCTA 57.604 41.667 0.00 0.00 0.00 2.43
1952 2481 6.184789 TCTTCTTCTCTTCTCCTTCCTCTAC 58.815 44.000 0.00 0.00 0.00 2.59
1953 2482 5.522315 TCTTCTCTTCTCCTTCCTCTACA 57.478 43.478 0.00 0.00 0.00 2.74
1954 2483 6.086011 TCTTCTCTTCTCCTTCCTCTACAT 57.914 41.667 0.00 0.00 0.00 2.29
1955 2484 6.126409 TCTTCTCTTCTCCTTCCTCTACATC 58.874 44.000 0.00 0.00 0.00 3.06
1956 2485 5.458451 TCTCTTCTCCTTCCTCTACATCA 57.542 43.478 0.00 0.00 0.00 3.07
1957 2486 5.445069 TCTCTTCTCCTTCCTCTACATCAG 58.555 45.833 0.00 0.00 0.00 2.90
1958 2487 3.957497 TCTTCTCCTTCCTCTACATCAGC 59.043 47.826 0.00 0.00 0.00 4.26
1959 2488 2.672098 TCTCCTTCCTCTACATCAGCC 58.328 52.381 0.00 0.00 0.00 4.85
1960 2489 2.246067 TCTCCTTCCTCTACATCAGCCT 59.754 50.000 0.00 0.00 0.00 4.58
1961 2490 3.037549 CTCCTTCCTCTACATCAGCCTT 58.962 50.000 0.00 0.00 0.00 4.35
1962 2491 2.768527 TCCTTCCTCTACATCAGCCTTG 59.231 50.000 0.00 0.00 0.00 3.61
1963 2492 2.158842 CCTTCCTCTACATCAGCCTTGG 60.159 54.545 0.00 0.00 0.00 3.61
1964 2493 2.254152 TCCTCTACATCAGCCTTGGT 57.746 50.000 0.00 0.00 0.00 3.67
1965 2494 3.398318 TCCTCTACATCAGCCTTGGTA 57.602 47.619 0.00 0.00 0.00 3.25
1966 2495 3.300388 TCCTCTACATCAGCCTTGGTAG 58.700 50.000 0.00 0.00 35.65 3.18
1967 2496 2.366916 CCTCTACATCAGCCTTGGTAGG 59.633 54.545 0.00 0.00 45.02 3.18
1968 2497 3.300388 CTCTACATCAGCCTTGGTAGGA 58.700 50.000 0.00 0.00 45.05 2.94
1969 2498 3.300388 TCTACATCAGCCTTGGTAGGAG 58.700 50.000 0.00 0.00 45.05 3.69
1970 2499 0.543749 ACATCAGCCTTGGTAGGAGC 59.456 55.000 0.00 0.00 45.05 4.70
1971 2500 0.179034 CATCAGCCTTGGTAGGAGCC 60.179 60.000 0.00 0.00 45.05 4.70
1972 2501 0.621571 ATCAGCCTTGGTAGGAGCCA 60.622 55.000 0.00 0.00 45.05 4.75
1973 2502 0.621571 TCAGCCTTGGTAGGAGCCAT 60.622 55.000 0.00 0.00 45.05 4.40
1974 2503 1.131638 CAGCCTTGGTAGGAGCCATA 58.868 55.000 0.00 0.00 45.05 2.74
1975 2504 1.132500 AGCCTTGGTAGGAGCCATAC 58.868 55.000 0.00 0.00 45.05 2.39
1976 2505 0.108774 GCCTTGGTAGGAGCCATACC 59.891 60.000 8.55 8.55 45.05 2.73
1984 2513 5.153950 GGTAGGAGCCATACCAATAAGAG 57.846 47.826 10.10 0.00 42.01 2.85
1985 2514 3.778954 AGGAGCCATACCAATAAGAGC 57.221 47.619 0.00 0.00 0.00 4.09
1986 2515 3.048600 AGGAGCCATACCAATAAGAGCA 58.951 45.455 0.00 0.00 0.00 4.26
1987 2516 3.072184 AGGAGCCATACCAATAAGAGCAG 59.928 47.826 0.00 0.00 0.00 4.24
1988 2517 3.181450 GGAGCCATACCAATAAGAGCAGT 60.181 47.826 0.00 0.00 0.00 4.40
1989 2518 4.061596 GAGCCATACCAATAAGAGCAGTC 58.938 47.826 0.00 0.00 0.00 3.51
1990 2519 3.455910 AGCCATACCAATAAGAGCAGTCA 59.544 43.478 0.00 0.00 0.00 3.41
1991 2520 4.103785 AGCCATACCAATAAGAGCAGTCAT 59.896 41.667 0.00 0.00 0.00 3.06
1992 2521 4.823989 GCCATACCAATAAGAGCAGTCATT 59.176 41.667 0.00 0.00 0.00 2.57
1993 2522 5.300286 GCCATACCAATAAGAGCAGTCATTT 59.700 40.000 0.00 0.00 0.00 2.32
1994 2523 6.514048 GCCATACCAATAAGAGCAGTCATTTC 60.514 42.308 0.00 0.00 0.00 2.17
1995 2524 6.016777 CCATACCAATAAGAGCAGTCATTTCC 60.017 42.308 0.00 0.00 0.00 3.13
1996 2525 5.184892 ACCAATAAGAGCAGTCATTTCCT 57.815 39.130 0.00 0.00 0.00 3.36
1997 2526 4.946157 ACCAATAAGAGCAGTCATTTCCTG 59.054 41.667 0.00 0.00 0.00 3.86
1998 2527 4.337555 CCAATAAGAGCAGTCATTTCCTGG 59.662 45.833 0.00 0.00 0.00 4.45
1999 2528 1.831580 AAGAGCAGTCATTTCCTGGC 58.168 50.000 0.00 0.00 0.00 4.85
2000 2529 0.392193 AGAGCAGTCATTTCCTGGCG 60.392 55.000 0.00 0.00 33.51 5.69
2001 2530 1.986575 GAGCAGTCATTTCCTGGCGC 61.987 60.000 0.00 0.00 33.51 6.53
2002 2531 3.056313 GCAGTCATTTCCTGGCGCC 62.056 63.158 22.73 22.73 33.51 6.53
2003 2532 1.675310 CAGTCATTTCCTGGCGCCA 60.675 57.895 30.59 30.59 33.51 5.69
2004 2533 1.675641 AGTCATTTCCTGGCGCCAC 60.676 57.895 29.03 13.74 33.51 5.01
2005 2534 2.361104 TCATTTCCTGGCGCCACC 60.361 61.111 29.03 0.00 39.84 4.61
2006 2535 3.451894 CATTTCCTGGCGCCACCC 61.452 66.667 29.03 0.00 37.83 4.61
2007 2536 3.978193 ATTTCCTGGCGCCACCCA 61.978 61.111 29.03 9.38 37.83 4.51
2008 2537 3.301222 ATTTCCTGGCGCCACCCAT 62.301 57.895 29.03 12.50 37.83 4.00
2009 2538 3.936772 TTTCCTGGCGCCACCCATC 62.937 63.158 29.03 0.00 37.83 3.51
2012 2541 4.100084 CTGGCGCCACCCATCAGA 62.100 66.667 29.03 0.00 37.83 3.27
2013 2542 3.626996 CTGGCGCCACCCATCAGAA 62.627 63.158 29.03 0.00 37.83 3.02
2014 2543 2.124151 GGCGCCACCCATCAGAAT 60.124 61.111 24.80 0.00 0.00 2.40
2015 2544 2.189499 GGCGCCACCCATCAGAATC 61.189 63.158 24.80 0.00 0.00 2.52
2016 2545 2.537560 GCGCCACCCATCAGAATCG 61.538 63.158 0.00 0.00 0.00 3.34
2017 2546 1.889105 CGCCACCCATCAGAATCGG 60.889 63.158 0.00 0.00 0.00 4.18
2018 2547 1.224592 GCCACCCATCAGAATCGGT 59.775 57.895 0.00 0.00 0.00 4.69
2019 2548 1.097547 GCCACCCATCAGAATCGGTG 61.098 60.000 6.86 6.86 42.13 4.94
2020 2549 1.097547 CCACCCATCAGAATCGGTGC 61.098 60.000 7.97 0.00 41.40 5.01
2021 2550 0.107508 CACCCATCAGAATCGGTGCT 60.108 55.000 0.00 0.00 37.34 4.40
2022 2551 0.179000 ACCCATCAGAATCGGTGCTC 59.821 55.000 0.00 0.00 0.00 4.26
2023 2552 0.178767 CCCATCAGAATCGGTGCTCA 59.821 55.000 0.00 0.00 0.00 4.26
2024 2553 1.202734 CCCATCAGAATCGGTGCTCAT 60.203 52.381 0.00 0.00 0.00 2.90
2025 2554 2.037641 CCCATCAGAATCGGTGCTCATA 59.962 50.000 0.00 0.00 0.00 2.15
2026 2555 3.062763 CCATCAGAATCGGTGCTCATAC 58.937 50.000 0.00 0.00 0.00 2.39
2027 2556 3.493176 CCATCAGAATCGGTGCTCATACA 60.493 47.826 0.00 0.00 0.00 2.29
2028 2557 3.443099 TCAGAATCGGTGCTCATACAG 57.557 47.619 0.00 0.00 0.00 2.74
2029 2558 3.023832 TCAGAATCGGTGCTCATACAGA 58.976 45.455 0.00 0.00 0.00 3.41
2051 2580 3.533720 CCCCCGTCGATAGCAAGA 58.466 61.111 0.00 0.00 0.00 3.02
2052 2581 1.067582 CCCCCGTCGATAGCAAGAC 59.932 63.158 0.00 0.00 0.00 3.01
2053 2582 1.067582 CCCCGTCGATAGCAAGACC 59.932 63.158 0.00 0.00 34.10 3.85
2054 2583 1.299165 CCCGTCGATAGCAAGACCG 60.299 63.158 0.00 0.00 34.10 4.79
2055 2584 1.299165 CCGTCGATAGCAAGACCGG 60.299 63.158 0.00 0.00 34.10 5.28
2056 2585 1.432251 CGTCGATAGCAAGACCGGT 59.568 57.895 6.92 6.92 34.10 5.28
2057 2586 0.866061 CGTCGATAGCAAGACCGGTG 60.866 60.000 14.63 0.00 34.10 4.94
2058 2587 0.454600 GTCGATAGCAAGACCGGTGA 59.545 55.000 14.63 0.00 0.00 4.02
2059 2588 1.067212 GTCGATAGCAAGACCGGTGAT 59.933 52.381 14.63 0.00 0.00 3.06
2060 2589 1.337071 TCGATAGCAAGACCGGTGATC 59.663 52.381 14.63 0.00 0.00 2.92
2061 2590 1.067060 CGATAGCAAGACCGGTGATCA 59.933 52.381 14.63 0.00 0.00 2.92
2062 2591 2.481276 CGATAGCAAGACCGGTGATCAA 60.481 50.000 14.63 0.00 0.00 2.57
2063 2592 2.672961 TAGCAAGACCGGTGATCAAG 57.327 50.000 14.63 0.00 0.00 3.02
2064 2593 0.036010 AGCAAGACCGGTGATCAAGG 60.036 55.000 14.63 14.89 0.00 3.61
2065 2594 0.036388 GCAAGACCGGTGATCAAGGA 60.036 55.000 14.63 0.00 0.00 3.36
2066 2595 2.009042 GCAAGACCGGTGATCAAGGAG 61.009 57.143 14.63 11.02 0.00 3.69
2067 2596 1.550524 CAAGACCGGTGATCAAGGAGA 59.449 52.381 14.63 0.00 0.00 3.71
2068 2597 1.187087 AGACCGGTGATCAAGGAGAC 58.813 55.000 14.63 13.09 0.00 3.36
2069 2598 0.895530 GACCGGTGATCAAGGAGACA 59.104 55.000 14.63 0.00 0.00 3.41
2070 2599 1.482593 GACCGGTGATCAAGGAGACAT 59.517 52.381 14.63 2.61 0.00 3.06
2071 2600 1.482593 ACCGGTGATCAAGGAGACATC 59.517 52.381 21.35 0.00 0.00 3.06
2081 2610 3.883997 GGAGACATCCTCGAGCATC 57.116 57.895 6.99 1.12 42.94 3.91
2082 2611 1.035923 GGAGACATCCTCGAGCATCA 58.964 55.000 6.99 0.00 42.94 3.07
2083 2612 1.269517 GGAGACATCCTCGAGCATCAC 60.270 57.143 6.99 0.05 42.94 3.06
2084 2613 0.383590 AGACATCCTCGAGCATCACG 59.616 55.000 6.99 0.00 33.17 4.35
2085 2614 0.596083 GACATCCTCGAGCATCACGG 60.596 60.000 6.99 0.00 33.17 4.94
2086 2615 1.323271 ACATCCTCGAGCATCACGGT 61.323 55.000 6.99 0.00 33.17 4.83
2087 2616 0.596083 CATCCTCGAGCATCACGGTC 60.596 60.000 6.99 0.00 38.84 4.79
2088 2617 1.037579 ATCCTCGAGCATCACGGTCA 61.038 55.000 6.99 0.00 42.55 4.02
2089 2618 1.037579 TCCTCGAGCATCACGGTCAT 61.038 55.000 6.99 0.00 42.55 3.06
2090 2619 0.596083 CCTCGAGCATCACGGTCATC 60.596 60.000 6.99 0.00 42.55 2.92
2091 2620 0.383590 CTCGAGCATCACGGTCATCT 59.616 55.000 0.00 0.00 42.55 2.90
2092 2621 0.382158 TCGAGCATCACGGTCATCTC 59.618 55.000 0.00 0.00 42.55 2.75
2093 2622 0.596083 CGAGCATCACGGTCATCTCC 60.596 60.000 0.00 0.00 42.55 3.71
2094 2623 0.249657 GAGCATCACGGTCATCTCCC 60.250 60.000 0.00 0.00 41.98 4.30
2095 2624 1.227674 GCATCACGGTCATCTCCCC 60.228 63.158 0.00 0.00 0.00 4.81
2096 2625 1.971505 GCATCACGGTCATCTCCCCA 61.972 60.000 0.00 0.00 0.00 4.96
2097 2626 0.105593 CATCACGGTCATCTCCCCAG 59.894 60.000 0.00 0.00 0.00 4.45
2098 2627 0.325671 ATCACGGTCATCTCCCCAGT 60.326 55.000 0.00 0.00 0.00 4.00
2099 2628 0.970937 TCACGGTCATCTCCCCAGTC 60.971 60.000 0.00 0.00 0.00 3.51
2100 2629 1.686110 ACGGTCATCTCCCCAGTCC 60.686 63.158 0.00 0.00 0.00 3.85
2101 2630 1.685765 CGGTCATCTCCCCAGTCCA 60.686 63.158 0.00 0.00 0.00 4.02
2102 2631 1.264749 CGGTCATCTCCCCAGTCCAA 61.265 60.000 0.00 0.00 0.00 3.53
2103 2632 0.991920 GGTCATCTCCCCAGTCCAAA 59.008 55.000 0.00 0.00 0.00 3.28
2104 2633 1.065126 GGTCATCTCCCCAGTCCAAAG 60.065 57.143 0.00 0.00 0.00 2.77
2105 2634 1.909302 GTCATCTCCCCAGTCCAAAGA 59.091 52.381 0.00 0.00 0.00 2.52
2106 2635 2.507471 GTCATCTCCCCAGTCCAAAGAT 59.493 50.000 0.00 0.00 0.00 2.40
2107 2636 2.507058 TCATCTCCCCAGTCCAAAGATG 59.493 50.000 4.65 4.65 42.93 2.90
2122 2651 5.100751 CAAAGATGGAAACTGTGTGTCTC 57.899 43.478 0.00 0.00 0.00 3.36
2123 2652 4.696479 AAGATGGAAACTGTGTGTCTCT 57.304 40.909 0.00 0.00 0.00 3.10
2124 2653 4.000331 AGATGGAAACTGTGTGTCTCTG 58.000 45.455 0.00 0.00 0.00 3.35
2125 2654 2.620251 TGGAAACTGTGTGTCTCTGG 57.380 50.000 0.00 0.00 0.00 3.86
2126 2655 1.230324 GGAAACTGTGTGTCTCTGGC 58.770 55.000 0.00 0.00 0.00 4.85
2127 2656 1.230324 GAAACTGTGTGTCTCTGGCC 58.770 55.000 0.00 0.00 0.00 5.36
2128 2657 0.839946 AAACTGTGTGTCTCTGGCCT 59.160 50.000 3.32 0.00 0.00 5.19
2129 2658 0.394565 AACTGTGTGTCTCTGGCCTC 59.605 55.000 3.32 0.00 0.00 4.70
2130 2659 1.294780 CTGTGTGTCTCTGGCCTCC 59.705 63.158 3.32 0.00 0.00 4.30
2131 2660 1.459348 TGTGTGTCTCTGGCCTCCA 60.459 57.895 3.32 0.00 0.00 3.86
2132 2661 1.004440 GTGTGTCTCTGGCCTCCAC 60.004 63.158 3.32 4.13 0.00 4.02
2133 2662 2.217038 TGTGTCTCTGGCCTCCACC 61.217 63.158 3.32 0.00 0.00 4.61
2134 2663 2.997315 TGTCTCTGGCCTCCACCG 60.997 66.667 3.32 0.00 0.00 4.94
2135 2664 2.680352 GTCTCTGGCCTCCACCGA 60.680 66.667 3.32 0.00 0.00 4.69
2136 2665 2.060980 GTCTCTGGCCTCCACCGAT 61.061 63.158 3.32 0.00 0.00 4.18
2137 2666 1.758514 TCTCTGGCCTCCACCGATC 60.759 63.158 3.32 0.00 0.00 3.69
2138 2667 2.038813 TCTGGCCTCCACCGATCA 59.961 61.111 3.32 0.00 0.00 2.92
2139 2668 2.025767 CTCTGGCCTCCACCGATCAG 62.026 65.000 3.32 0.00 0.00 2.90
2140 2669 3.746949 CTGGCCTCCACCGATCAGC 62.747 68.421 3.32 0.00 0.00 4.26
2141 2670 3.785859 GGCCTCCACCGATCAGCA 61.786 66.667 0.00 0.00 0.00 4.41
2142 2671 2.268920 GCCTCCACCGATCAGCAA 59.731 61.111 0.00 0.00 0.00 3.91
2143 2672 1.817099 GCCTCCACCGATCAGCAAG 60.817 63.158 0.00 0.00 0.00 4.01
2144 2673 1.900351 CCTCCACCGATCAGCAAGA 59.100 57.895 0.00 0.00 0.00 3.02
2145 2674 0.179089 CCTCCACCGATCAGCAAGAG 60.179 60.000 0.00 0.00 0.00 2.85
2146 2675 0.820226 CTCCACCGATCAGCAAGAGA 59.180 55.000 0.00 0.00 0.00 3.10
2147 2676 0.820226 TCCACCGATCAGCAAGAGAG 59.180 55.000 0.00 0.00 0.00 3.20
2148 2677 0.179089 CCACCGATCAGCAAGAGAGG 60.179 60.000 0.00 0.00 34.15 3.69
2149 2678 0.820226 CACCGATCAGCAAGAGAGGA 59.180 55.000 8.83 0.00 32.79 3.71
2150 2679 0.820871 ACCGATCAGCAAGAGAGGAC 59.179 55.000 8.83 0.00 32.79 3.85
2151 2680 0.820226 CCGATCAGCAAGAGAGGACA 59.180 55.000 0.00 0.00 0.00 4.02
2152 2681 1.470632 CCGATCAGCAAGAGAGGACAC 60.471 57.143 0.00 0.00 0.00 3.67
2153 2682 1.470632 CGATCAGCAAGAGAGGACACC 60.471 57.143 0.00 0.00 0.00 4.16
2154 2683 1.552337 GATCAGCAAGAGAGGACACCA 59.448 52.381 0.00 0.00 0.00 4.17
2155 2684 0.972134 TCAGCAAGAGAGGACACCAG 59.028 55.000 0.00 0.00 0.00 4.00
2156 2685 0.683973 CAGCAAGAGAGGACACCAGT 59.316 55.000 0.00 0.00 0.00 4.00
2157 2686 0.683973 AGCAAGAGAGGACACCAGTG 59.316 55.000 0.00 0.00 0.00 3.66
2158 2687 0.321122 GCAAGAGAGGACACCAGTGG 60.321 60.000 7.91 7.91 34.19 4.00
2159 2688 1.342074 CAAGAGAGGACACCAGTGGA 58.658 55.000 18.40 0.00 34.19 4.02
2160 2689 1.274728 CAAGAGAGGACACCAGTGGAG 59.725 57.143 18.40 11.28 34.19 3.86
2161 2690 0.902516 AGAGAGGACACCAGTGGAGC 60.903 60.000 18.40 4.31 34.19 4.70
2162 2691 2.219325 GAGAGGACACCAGTGGAGCG 62.219 65.000 18.40 6.31 34.19 5.03
2163 2692 2.524394 AGGACACCAGTGGAGCGT 60.524 61.111 18.40 9.83 34.19 5.07
2164 2693 2.100879 GAGGACACCAGTGGAGCGTT 62.101 60.000 18.40 0.00 34.19 4.84
2165 2694 1.961277 GGACACCAGTGGAGCGTTG 60.961 63.158 18.40 5.58 34.19 4.10
2166 2695 1.069090 GACACCAGTGGAGCGTTGA 59.931 57.895 18.40 0.00 34.19 3.18
2167 2696 0.946221 GACACCAGTGGAGCGTTGAG 60.946 60.000 18.40 0.00 34.19 3.02
2168 2697 1.669115 CACCAGTGGAGCGTTGAGG 60.669 63.158 18.40 0.00 0.00 3.86
2169 2698 2.140792 ACCAGTGGAGCGTTGAGGT 61.141 57.895 18.40 0.00 0.00 3.85
2170 2699 1.071471 CCAGTGGAGCGTTGAGGTT 59.929 57.895 1.68 0.00 0.00 3.50
2171 2700 0.951040 CCAGTGGAGCGTTGAGGTTC 60.951 60.000 1.68 0.00 0.00 3.62
2172 2701 1.006102 AGTGGAGCGTTGAGGTTCG 60.006 57.895 0.00 0.00 0.00 3.95
2173 2702 2.027625 GTGGAGCGTTGAGGTTCGG 61.028 63.158 0.00 0.00 0.00 4.30
2174 2703 3.119096 GGAGCGTTGAGGTTCGGC 61.119 66.667 0.00 0.00 0.00 5.54
2175 2704 3.479269 GAGCGTTGAGGTTCGGCG 61.479 66.667 0.00 0.00 0.00 6.46
2176 2705 4.295119 AGCGTTGAGGTTCGGCGT 62.295 61.111 6.85 0.00 0.00 5.68
2177 2706 4.072088 GCGTTGAGGTTCGGCGTG 62.072 66.667 6.85 0.00 0.00 5.34
2178 2707 3.411351 CGTTGAGGTTCGGCGTGG 61.411 66.667 6.85 0.00 0.00 4.94
2179 2708 2.029964 GTTGAGGTTCGGCGTGGA 59.970 61.111 6.85 0.00 0.00 4.02
2180 2709 2.029964 TTGAGGTTCGGCGTGGAC 59.970 61.111 6.85 4.50 0.00 4.02
2181 2710 3.524648 TTGAGGTTCGGCGTGGACC 62.525 63.158 17.52 17.52 0.00 4.46
2191 2720 4.308458 CGTGGACCGGCTGACCAA 62.308 66.667 0.00 0.00 35.40 3.67
2192 2721 2.668550 GTGGACCGGCTGACCAAC 60.669 66.667 0.00 0.00 35.40 3.77
2193 2722 2.847234 TGGACCGGCTGACCAACT 60.847 61.111 0.00 0.00 34.57 3.16
2194 2723 2.358737 GGACCGGCTGACCAACTG 60.359 66.667 0.00 0.00 34.57 3.16
2195 2724 2.741092 GACCGGCTGACCAACTGA 59.259 61.111 0.00 0.00 34.57 3.41
2196 2725 1.070786 GACCGGCTGACCAACTGAA 59.929 57.895 0.00 0.00 34.57 3.02
2197 2726 0.321653 GACCGGCTGACCAACTGAAT 60.322 55.000 0.00 0.00 34.57 2.57
2198 2727 0.321653 ACCGGCTGACCAACTGAATC 60.322 55.000 0.00 0.00 34.57 2.52
2199 2728 1.026718 CCGGCTGACCAACTGAATCC 61.027 60.000 0.00 0.00 34.57 3.01
2200 2729 0.321564 CGGCTGACCAACTGAATCCA 60.322 55.000 0.00 0.00 34.57 3.41
2201 2730 1.168714 GGCTGACCAACTGAATCCAC 58.831 55.000 0.00 0.00 35.26 4.02
2202 2731 0.798776 GCTGACCAACTGAATCCACG 59.201 55.000 0.00 0.00 0.00 4.94
2203 2732 1.442769 CTGACCAACTGAATCCACGG 58.557 55.000 0.00 0.00 0.00 4.94
2204 2733 0.036164 TGACCAACTGAATCCACGGG 59.964 55.000 0.00 0.00 0.00 5.28
2205 2734 0.323629 GACCAACTGAATCCACGGGA 59.676 55.000 0.00 0.00 35.55 5.14
2206 2735 0.324943 ACCAACTGAATCCACGGGAG 59.675 55.000 0.00 0.00 34.05 4.30
2207 2736 0.392998 CCAACTGAATCCACGGGAGG 60.393 60.000 0.00 0.00 34.05 4.30
2208 2737 1.026718 CAACTGAATCCACGGGAGGC 61.027 60.000 0.00 0.00 34.05 4.70
2209 2738 1.488705 AACTGAATCCACGGGAGGCA 61.489 55.000 0.00 0.00 34.05 4.75
2210 2739 1.153289 CTGAATCCACGGGAGGCAG 60.153 63.158 0.00 0.00 34.05 4.85
2211 2740 1.612146 TGAATCCACGGGAGGCAGA 60.612 57.895 0.00 0.00 34.05 4.26
2212 2741 1.144936 GAATCCACGGGAGGCAGAG 59.855 63.158 0.00 0.00 34.05 3.35
2213 2742 1.613630 AATCCACGGGAGGCAGAGT 60.614 57.895 0.00 0.00 34.05 3.24
2214 2743 1.617947 AATCCACGGGAGGCAGAGTC 61.618 60.000 0.00 0.00 34.05 3.36
2215 2744 3.775654 CCACGGGAGGCAGAGTCC 61.776 72.222 0.00 0.00 0.00 3.85
2225 2754 4.463879 CAGAGTCCCGCCTGCTGG 62.464 72.222 5.03 5.03 0.00 4.85
2226 2755 4.704103 AGAGTCCCGCCTGCTGGA 62.704 66.667 14.77 0.00 34.57 3.86
2227 2756 3.474570 GAGTCCCGCCTGCTGGAT 61.475 66.667 14.77 0.00 32.17 3.41
2228 2757 3.746949 GAGTCCCGCCTGCTGGATG 62.747 68.421 14.77 4.56 32.17 3.51
2229 2758 4.101448 GTCCCGCCTGCTGGATGT 62.101 66.667 14.77 0.00 32.17 3.06
2230 2759 2.364973 TCCCGCCTGCTGGATGTA 60.365 61.111 14.77 0.00 34.57 2.29
2231 2760 2.203070 CCCGCCTGCTGGATGTAC 60.203 66.667 14.77 0.00 34.57 2.90
2232 2761 2.584064 CCGCCTGCTGGATGTACA 59.416 61.111 14.77 0.00 34.57 2.90
2233 2762 1.522355 CCGCCTGCTGGATGTACAG 60.522 63.158 14.77 0.00 41.41 2.74
2234 2763 1.219124 CGCCTGCTGGATGTACAGT 59.781 57.895 14.77 0.00 40.59 3.55
2235 2764 1.086067 CGCCTGCTGGATGTACAGTG 61.086 60.000 14.77 0.00 40.59 3.66
2236 2765 0.036010 GCCTGCTGGATGTACAGTGT 60.036 55.000 14.77 0.00 40.59 3.55
2237 2766 1.730501 CCTGCTGGATGTACAGTGTG 58.269 55.000 5.88 0.00 40.59 3.82
2238 2767 1.002430 CCTGCTGGATGTACAGTGTGT 59.998 52.381 5.88 0.00 40.59 3.72
2239 2768 2.233676 CCTGCTGGATGTACAGTGTGTA 59.766 50.000 5.88 0.00 40.59 2.90
2240 2769 3.923053 CCTGCTGGATGTACAGTGTGTAC 60.923 52.174 5.88 9.79 43.57 2.90
2241 2770 6.940252 CCTGCTGGATGTACAGTGTGTACC 62.940 54.167 5.88 4.98 43.10 3.34
2247 2776 2.649331 GTACAGTGTGTACCGCTCAT 57.351 50.000 5.88 0.00 45.52 2.90
2248 2777 2.527100 GTACAGTGTGTACCGCTCATC 58.473 52.381 5.88 0.00 45.52 2.92
2249 2778 0.109272 ACAGTGTGTACCGCTCATCG 60.109 55.000 0.00 0.00 38.08 3.84
2250 2779 0.109272 CAGTGTGTACCGCTCATCGT 60.109 55.000 0.00 0.00 36.19 3.73
2251 2780 1.131693 CAGTGTGTACCGCTCATCGTA 59.868 52.381 0.00 0.00 36.19 3.43
2252 2781 1.131883 AGTGTGTACCGCTCATCGTAC 59.868 52.381 0.00 0.00 36.19 3.67
2253 2782 1.131883 GTGTGTACCGCTCATCGTACT 59.868 52.381 0.00 0.00 36.19 2.73
2254 2783 2.352651 GTGTGTACCGCTCATCGTACTA 59.647 50.000 0.00 0.00 36.19 1.82
2255 2784 3.003068 GTGTGTACCGCTCATCGTACTAT 59.997 47.826 0.00 0.00 36.19 2.12
2256 2785 3.628942 TGTGTACCGCTCATCGTACTATT 59.371 43.478 0.00 0.00 36.19 1.73
2257 2786 4.815846 TGTGTACCGCTCATCGTACTATTA 59.184 41.667 0.00 0.00 36.19 0.98
2258 2787 5.049886 TGTGTACCGCTCATCGTACTATTAG 60.050 44.000 0.00 0.00 36.19 1.73
2259 2788 4.453478 TGTACCGCTCATCGTACTATTAGG 59.547 45.833 0.00 0.00 36.19 2.69
2260 2789 2.818432 ACCGCTCATCGTACTATTAGGG 59.182 50.000 0.00 0.00 36.19 3.53
2261 2790 3.079578 CCGCTCATCGTACTATTAGGGA 58.920 50.000 7.07 0.00 36.19 4.20
2262 2791 3.504906 CCGCTCATCGTACTATTAGGGAA 59.495 47.826 7.07 0.00 36.19 3.97
2263 2792 4.474113 CGCTCATCGTACTATTAGGGAAC 58.526 47.826 0.81 0.00 0.00 3.62
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.045942 ACATTTTGGTTCACAAGGTCCTTTT 60.046 36.000 0.00 0.00 40.82 2.27
1 2 4.469586 ACATTTTGGTTCACAAGGTCCTTT 59.530 37.500 0.00 0.00 40.82 3.11
2 3 4.030216 ACATTTTGGTTCACAAGGTCCTT 58.970 39.130 0.00 0.00 40.82 3.36
3 4 3.384467 CACATTTTGGTTCACAAGGTCCT 59.616 43.478 0.00 0.00 40.82 3.85
4 5 3.132111 ACACATTTTGGTTCACAAGGTCC 59.868 43.478 0.00 0.00 40.82 4.46
57 59 3.980646 TGTCCAAAACACATAGCACAC 57.019 42.857 0.00 0.00 31.20 3.82
81 83 9.494271 CACACATAAAGGAGTTATAGCACATAT 57.506 33.333 0.00 0.00 30.84 1.78
188 190 6.486657 GTGGTTGGCATACTATGTCACATAAT 59.513 38.462 2.67 0.00 45.86 1.28
268 290 2.036733 ACTAGACAGTGCAACGCCTTAA 59.963 45.455 0.00 0.00 45.86 1.85
291 624 2.138179 GCCTATGGGTCGGGTGCTA 61.138 63.158 0.00 0.00 34.45 3.49
311 644 3.380004 CCAGTAAGTTTTCCTGTGTGCAA 59.620 43.478 0.00 0.00 0.00 4.08
327 681 2.104792 AGCAACAGAAGCAGTCCAGTAA 59.895 45.455 0.00 0.00 0.00 2.24
335 689 1.001746 TCCAGAGAGCAACAGAAGCAG 59.998 52.381 0.00 0.00 0.00 4.24
360 715 1.068083 CACTGCACGTCTGGACACT 59.932 57.895 1.63 0.00 0.00 3.55
386 741 1.822990 GCACATACTATAGCGCCCCTA 59.177 52.381 2.29 0.00 0.00 3.53
434 835 4.395625 ACTTTTCTAAGTTAGGGTGCACC 58.604 43.478 28.57 28.57 41.85 5.01
452 853 3.244770 TGCACTATTCCCTCCGAAACTTT 60.245 43.478 0.00 0.00 33.08 2.66
455 856 2.280628 CTGCACTATTCCCTCCGAAAC 58.719 52.381 0.00 0.00 33.08 2.78
458 859 1.823295 GCTGCACTATTCCCTCCGA 59.177 57.895 0.00 0.00 0.00 4.55
459 860 1.592669 CGCTGCACTATTCCCTCCG 60.593 63.158 0.00 0.00 0.00 4.63
461 862 1.889573 GGCGCTGCACTATTCCCTC 60.890 63.158 7.64 0.00 0.00 4.30
462 863 2.190578 GGCGCTGCACTATTCCCT 59.809 61.111 7.64 0.00 0.00 4.20
463 864 1.889573 GAGGCGCTGCACTATTCCC 60.890 63.158 7.64 0.00 0.00 3.97
464 865 0.878086 GAGAGGCGCTGCACTATTCC 60.878 60.000 7.64 0.00 0.00 3.01
491 971 1.310216 GCATGTCCAGATGTGCAGCA 61.310 55.000 0.00 0.00 37.52 4.41
525 1005 2.352388 TGGCTACTGGAAACGTTATGC 58.648 47.619 0.00 0.00 0.00 3.14
533 1013 1.555075 AGCTCGAATGGCTACTGGAAA 59.445 47.619 0.00 0.00 38.36 3.13
604 1084 2.690778 GCTGTGCAACGCCTAAGGG 61.691 63.158 0.00 0.00 42.39 3.95
637 1117 4.315264 GGGGTGGGTGGGTGCAAT 62.315 66.667 0.00 0.00 0.00 3.56
753 1279 0.476808 TAAGGGAGGGGTTGGCTTCA 60.477 55.000 0.00 0.00 0.00 3.02
787 1313 4.165180 TCATTTGGATGAAACGAGGGGATA 59.835 41.667 0.00 0.00 39.29 2.59
1026 1553 1.765904 TCTTGGTTAGCACACAGTGGA 59.234 47.619 5.31 0.00 33.64 4.02
1068 1595 2.746904 CACCTTGTCCAAATATGCGTCA 59.253 45.455 0.00 0.00 0.00 4.35
1076 1603 1.697432 TCTCCGTCACCTTGTCCAAAT 59.303 47.619 0.00 0.00 0.00 2.32
1177 1704 6.071320 GGCATACAAAATATCTCCTCCCTTT 58.929 40.000 0.00 0.00 0.00 3.11
1227 1754 1.903860 TGGTCATAGGCGTTAGTTGGT 59.096 47.619 0.00 0.00 0.00 3.67
1265 1792 9.337396 ACACATTTGAGAGTAACATTTGACTTA 57.663 29.630 0.00 0.00 0.00 2.24
1270 1797 7.416817 TGACACACATTTGAGAGTAACATTTG 58.583 34.615 0.00 0.00 0.00 2.32
1441 1970 0.037303 TGCTCTTCCTCCAAGCCTTG 59.963 55.000 0.00 0.00 35.12 3.61
1442 1971 0.998145 ATGCTCTTCCTCCAAGCCTT 59.002 50.000 0.00 0.00 35.12 4.35
1489 2018 2.114616 TGCCCTCTCCTTCTCTCATTC 58.885 52.381 0.00 0.00 0.00 2.67
1498 2027 1.763770 CTTGGTGTGCCCTCTCCTT 59.236 57.895 0.00 0.00 0.00 3.36
1511 2040 4.520492 CCTCATGAGTAAGTTTTGCTTGGT 59.480 41.667 21.11 0.00 38.05 3.67
1525 2054 0.398381 GCCCTCTCCTCCTCATGAGT 60.398 60.000 21.11 0.00 39.65 3.41
1548 2077 1.443363 GCGAGCCTTTGCAAGCTTC 60.443 57.895 13.77 6.43 40.11 3.86
1579 2108 0.670546 CTGTCACGTGCCGAATCCTT 60.671 55.000 11.67 0.00 0.00 3.36
1598 2127 0.684479 GTGAGGCCATTTCCCCTTCC 60.684 60.000 5.01 0.00 0.00 3.46
1616 2145 2.713877 GAAGTCCCTACTGAGTCGAGT 58.286 52.381 0.00 0.00 35.62 4.18
1775 2304 4.938226 GGACTTTATTTCCTGACTCCACAG 59.062 45.833 0.00 0.00 37.61 3.66
1776 2305 4.597507 AGGACTTTATTTCCTGACTCCACA 59.402 41.667 0.00 0.00 42.28 4.17
1777 2306 5.167303 AGGACTTTATTTCCTGACTCCAC 57.833 43.478 0.00 0.00 42.28 4.02
1778 2307 4.844085 TGAGGACTTTATTTCCTGACTCCA 59.156 41.667 0.00 0.00 44.03 3.86
1779 2308 5.422214 TGAGGACTTTATTTCCTGACTCC 57.578 43.478 0.00 0.00 44.03 3.85
1780 2309 6.592220 GTCTTGAGGACTTTATTTCCTGACTC 59.408 42.308 0.00 0.00 44.03 3.36
1781 2310 6.043243 TGTCTTGAGGACTTTATTTCCTGACT 59.957 38.462 0.00 0.00 44.03 3.41
1782 2311 6.231211 TGTCTTGAGGACTTTATTTCCTGAC 58.769 40.000 0.00 0.00 44.03 3.51
1783 2312 6.433847 TGTCTTGAGGACTTTATTTCCTGA 57.566 37.500 0.00 0.00 44.03 3.86
1784 2313 7.175641 ACATTGTCTTGAGGACTTTATTTCCTG 59.824 37.037 0.00 0.00 44.03 3.86
1785 2314 7.234355 ACATTGTCTTGAGGACTTTATTTCCT 58.766 34.615 0.00 0.00 46.87 3.36
1786 2315 7.454260 ACATTGTCTTGAGGACTTTATTTCC 57.546 36.000 0.00 0.00 44.74 3.13
1787 2316 8.451748 GGTACATTGTCTTGAGGACTTTATTTC 58.548 37.037 0.00 0.00 44.74 2.17
1788 2317 7.942341 TGGTACATTGTCTTGAGGACTTTATTT 59.058 33.333 0.00 0.00 44.74 1.40
1789 2318 7.390718 GTGGTACATTGTCTTGAGGACTTTATT 59.609 37.037 0.00 0.00 44.52 1.40
1790 2319 6.879458 GTGGTACATTGTCTTGAGGACTTTAT 59.121 38.462 0.00 0.00 44.52 1.40
1791 2320 6.183361 TGTGGTACATTGTCTTGAGGACTTTA 60.183 38.462 0.00 0.00 44.52 1.85
1792 2321 5.063880 GTGGTACATTGTCTTGAGGACTTT 58.936 41.667 0.00 0.00 44.52 2.66
1793 2322 4.102524 TGTGGTACATTGTCTTGAGGACTT 59.897 41.667 0.00 0.00 44.52 3.01
1794 2323 3.646162 TGTGGTACATTGTCTTGAGGACT 59.354 43.478 0.00 0.00 44.52 3.85
1795 2324 4.002906 TGTGGTACATTGTCTTGAGGAC 57.997 45.455 0.00 0.00 44.52 3.85
1796 2325 4.908601 ATGTGGTACATTGTCTTGAGGA 57.091 40.909 0.00 0.00 44.52 3.71
1797 2326 7.653713 GTCTATATGTGGTACATTGTCTTGAGG 59.346 40.741 0.00 0.00 44.52 3.86
1798 2327 8.197439 TGTCTATATGTGGTACATTGTCTTGAG 58.803 37.037 0.00 0.00 44.52 3.02
1799 2328 7.979537 GTGTCTATATGTGGTACATTGTCTTGA 59.020 37.037 0.00 0.00 44.52 3.02
1800 2329 7.043391 CGTGTCTATATGTGGTACATTGTCTTG 60.043 40.741 0.00 0.00 44.52 3.02
1801 2330 6.978659 CGTGTCTATATGTGGTACATTGTCTT 59.021 38.462 0.00 0.00 44.52 3.01
1802 2331 6.320418 TCGTGTCTATATGTGGTACATTGTCT 59.680 38.462 0.00 0.00 44.52 3.41
1803 2332 6.500910 TCGTGTCTATATGTGGTACATTGTC 58.499 40.000 0.00 0.00 44.52 3.18
1804 2333 6.459670 TCGTGTCTATATGTGGTACATTGT 57.540 37.500 0.00 0.00 44.52 2.71
1805 2334 5.402568 GCTCGTGTCTATATGTGGTACATTG 59.597 44.000 0.00 0.00 44.52 2.82
1806 2335 5.068591 TGCTCGTGTCTATATGTGGTACATT 59.931 40.000 0.00 0.00 44.52 2.71
1807 2336 4.583073 TGCTCGTGTCTATATGTGGTACAT 59.417 41.667 0.00 0.00 44.52 2.29
1808 2337 3.949113 TGCTCGTGTCTATATGTGGTACA 59.051 43.478 0.00 0.00 0.00 2.90
1809 2338 4.563337 TGCTCGTGTCTATATGTGGTAC 57.437 45.455 0.00 0.00 0.00 3.34
1810 2339 4.583073 ACATGCTCGTGTCTATATGTGGTA 59.417 41.667 0.00 0.00 0.00 3.25
1811 2340 3.384789 ACATGCTCGTGTCTATATGTGGT 59.615 43.478 0.00 0.00 0.00 4.16
1812 2341 3.737774 CACATGCTCGTGTCTATATGTGG 59.262 47.826 0.00 0.00 40.80 4.17
1813 2342 4.961433 CACATGCTCGTGTCTATATGTG 57.039 45.455 0.00 0.00 39.30 3.21
1823 2352 1.284657 GATCCAGACACATGCTCGTG 58.715 55.000 0.00 4.75 42.81 4.35
1824 2353 0.897621 TGATCCAGACACATGCTCGT 59.102 50.000 0.00 0.00 0.00 4.18
1825 2354 1.284657 GTGATCCAGACACATGCTCG 58.715 55.000 0.00 0.00 38.05 5.03
1826 2355 2.391616 TGTGATCCAGACACATGCTC 57.608 50.000 0.00 0.00 42.20 4.26
1832 2361 4.813161 CCACTGATAATGTGATCCAGACAC 59.187 45.833 0.00 0.00 37.60 3.67
1833 2362 4.684214 GCCACTGATAATGTGATCCAGACA 60.684 45.833 0.00 0.00 37.60 3.41
1834 2363 3.812053 GCCACTGATAATGTGATCCAGAC 59.188 47.826 0.00 0.00 37.60 3.51
1835 2364 3.455543 TGCCACTGATAATGTGATCCAGA 59.544 43.478 0.00 0.00 37.60 3.86
1836 2365 3.812262 TGCCACTGATAATGTGATCCAG 58.188 45.455 0.00 0.00 37.60 3.86
1837 2366 3.929955 TGCCACTGATAATGTGATCCA 57.070 42.857 0.00 0.00 37.60 3.41
1838 2367 3.755378 GGATGCCACTGATAATGTGATCC 59.245 47.826 0.00 0.00 37.60 3.36
1839 2368 3.434641 CGGATGCCACTGATAATGTGATC 59.565 47.826 0.00 0.00 37.60 2.92
1840 2369 3.405831 CGGATGCCACTGATAATGTGAT 58.594 45.455 0.00 0.00 37.60 3.06
1841 2370 2.837498 CGGATGCCACTGATAATGTGA 58.163 47.619 0.00 0.00 37.60 3.58
1842 2371 1.265095 GCGGATGCCACTGATAATGTG 59.735 52.381 0.00 0.00 33.98 3.21
1843 2372 1.134128 TGCGGATGCCACTGATAATGT 60.134 47.619 0.00 0.00 41.78 2.71
1844 2373 1.534163 CTGCGGATGCCACTGATAATG 59.466 52.381 0.00 0.00 41.78 1.90
1845 2374 1.544093 CCTGCGGATGCCACTGATAAT 60.544 52.381 0.00 0.00 41.78 1.28
1846 2375 0.179048 CCTGCGGATGCCACTGATAA 60.179 55.000 0.00 0.00 41.78 1.75
1847 2376 1.447217 CCTGCGGATGCCACTGATA 59.553 57.895 0.00 0.00 41.78 2.15
1848 2377 2.191375 CCTGCGGATGCCACTGAT 59.809 61.111 0.00 0.00 41.78 2.90
1849 2378 4.100084 CCCTGCGGATGCCACTGA 62.100 66.667 0.00 0.00 41.78 3.41
1853 2382 4.445710 ATTGCCCTGCGGATGCCA 62.446 61.111 0.00 0.00 41.78 4.92
1854 2383 3.908081 CATTGCCCTGCGGATGCC 61.908 66.667 0.00 0.00 41.78 4.40
1855 2384 4.580551 GCATTGCCCTGCGGATGC 62.581 66.667 10.16 10.16 41.01 3.91
1861 2390 2.812178 CTTTGCGCATTGCCCTGC 60.812 61.111 12.75 1.42 45.60 4.85
1862 2391 1.005867 AACTTTGCGCATTGCCCTG 60.006 52.632 12.75 0.00 45.60 4.45
1863 2392 1.290009 GAACTTTGCGCATTGCCCT 59.710 52.632 12.75 0.00 45.60 5.19
1864 2393 1.737735 GGAACTTTGCGCATTGCCC 60.738 57.895 12.75 5.72 45.60 5.36
1865 2394 1.290009 AGGAACTTTGCGCATTGCC 59.710 52.632 12.75 7.05 38.37 4.52
1866 2395 4.972591 AGGAACTTTGCGCATTGC 57.027 50.000 12.75 8.49 39.72 3.56
1878 2407 4.537015 CTTTCACGTGGATTCAAAGGAAC 58.463 43.478 17.00 0.00 35.46 3.62
1879 2408 3.004315 GCTTTCACGTGGATTCAAAGGAA 59.996 43.478 21.30 2.64 37.45 3.36
1880 2409 2.552315 GCTTTCACGTGGATTCAAAGGA 59.448 45.455 21.30 0.00 0.00 3.36
1881 2410 2.293122 TGCTTTCACGTGGATTCAAAGG 59.707 45.455 21.30 8.80 0.00 3.11
1882 2411 3.558505 CTGCTTTCACGTGGATTCAAAG 58.441 45.455 17.00 17.43 0.00 2.77
1883 2412 2.287547 GCTGCTTTCACGTGGATTCAAA 60.288 45.455 17.00 7.43 0.00 2.69
1884 2413 1.266718 GCTGCTTTCACGTGGATTCAA 59.733 47.619 17.00 0.00 0.00 2.69
1885 2414 0.874390 GCTGCTTTCACGTGGATTCA 59.126 50.000 17.00 7.03 0.00 2.57
1886 2415 1.129437 GAGCTGCTTTCACGTGGATTC 59.871 52.381 17.00 2.12 0.00 2.52
1887 2416 1.160137 GAGCTGCTTTCACGTGGATT 58.840 50.000 17.00 0.00 0.00 3.01
1888 2417 0.674895 GGAGCTGCTTTCACGTGGAT 60.675 55.000 17.00 0.00 0.00 3.41
1889 2418 1.301716 GGAGCTGCTTTCACGTGGA 60.302 57.895 17.00 3.16 0.00 4.02
1890 2419 2.671177 CGGAGCTGCTTTCACGTGG 61.671 63.158 17.00 0.08 0.00 4.94
1891 2420 2.671177 CCGGAGCTGCTTTCACGTG 61.671 63.158 9.94 9.94 0.00 4.49
1892 2421 2.357517 CCGGAGCTGCTTTCACGT 60.358 61.111 2.53 0.00 0.00 4.49
1893 2422 3.793144 GCCGGAGCTGCTTTCACG 61.793 66.667 5.05 6.80 35.50 4.35
1903 2432 1.002011 AAAGGAAAGGAGCCGGAGC 60.002 57.895 5.05 0.00 40.32 4.70
1904 2433 0.393132 GGAAAGGAAAGGAGCCGGAG 60.393 60.000 5.05 0.00 0.00 4.63
1905 2434 0.840722 AGGAAAGGAAAGGAGCCGGA 60.841 55.000 5.05 0.00 0.00 5.14
1906 2435 0.038310 AAGGAAAGGAAAGGAGCCGG 59.962 55.000 0.00 0.00 0.00 6.13
1907 2436 1.003696 AGAAGGAAAGGAAAGGAGCCG 59.996 52.381 0.00 0.00 0.00 5.52
1908 2437 2.889170 AGAAGGAAAGGAAAGGAGCC 57.111 50.000 0.00 0.00 0.00 4.70
1909 2438 4.027674 AGAAGAAGGAAAGGAAAGGAGC 57.972 45.455 0.00 0.00 0.00 4.70
1910 2439 5.875224 AGAAGAAGAAGGAAAGGAAAGGAG 58.125 41.667 0.00 0.00 0.00 3.69
1911 2440 5.913946 AGAAGAAGAAGGAAAGGAAAGGA 57.086 39.130 0.00 0.00 0.00 3.36
1912 2441 6.303054 AGAAGAAGAAGAAGGAAAGGAAAGG 58.697 40.000 0.00 0.00 0.00 3.11
1913 2442 7.223584 AGAGAAGAAGAAGAAGGAAAGGAAAG 58.776 38.462 0.00 0.00 0.00 2.62
1914 2443 7.142995 AGAGAAGAAGAAGAAGGAAAGGAAA 57.857 36.000 0.00 0.00 0.00 3.13
1915 2444 6.755542 AGAGAAGAAGAAGAAGGAAAGGAA 57.244 37.500 0.00 0.00 0.00 3.36
1916 2445 6.556874 AGAAGAGAAGAAGAAGAAGGAAAGGA 59.443 38.462 0.00 0.00 0.00 3.36
1917 2446 6.768483 AGAAGAGAAGAAGAAGAAGGAAAGG 58.232 40.000 0.00 0.00 0.00 3.11
1918 2447 6.873605 GGAGAAGAGAAGAAGAAGAAGGAAAG 59.126 42.308 0.00 0.00 0.00 2.62
1919 2448 6.556874 AGGAGAAGAGAAGAAGAAGAAGGAAA 59.443 38.462 0.00 0.00 0.00 3.13
1920 2449 6.081356 AGGAGAAGAGAAGAAGAAGAAGGAA 58.919 40.000 0.00 0.00 0.00 3.36
1921 2450 5.650283 AGGAGAAGAGAAGAAGAAGAAGGA 58.350 41.667 0.00 0.00 0.00 3.36
1922 2451 6.358974 AAGGAGAAGAGAAGAAGAAGAAGG 57.641 41.667 0.00 0.00 0.00 3.46
1923 2452 6.211384 AGGAAGGAGAAGAGAAGAAGAAGAAG 59.789 42.308 0.00 0.00 0.00 2.85
1924 2453 6.081356 AGGAAGGAGAAGAGAAGAAGAAGAA 58.919 40.000 0.00 0.00 0.00 2.52
1925 2454 5.650283 AGGAAGGAGAAGAGAAGAAGAAGA 58.350 41.667 0.00 0.00 0.00 2.87
1926 2455 5.716703 AGAGGAAGGAGAAGAGAAGAAGAAG 59.283 44.000 0.00 0.00 0.00 2.85
1927 2456 5.650283 AGAGGAAGGAGAAGAGAAGAAGAA 58.350 41.667 0.00 0.00 0.00 2.52
1928 2457 5.269554 AGAGGAAGGAGAAGAGAAGAAGA 57.730 43.478 0.00 0.00 0.00 2.87
1929 2458 5.949354 TGTAGAGGAAGGAGAAGAGAAGAAG 59.051 44.000 0.00 0.00 0.00 2.85
1930 2459 5.893500 TGTAGAGGAAGGAGAAGAGAAGAA 58.106 41.667 0.00 0.00 0.00 2.52
1931 2460 5.522315 TGTAGAGGAAGGAGAAGAGAAGA 57.478 43.478 0.00 0.00 0.00 2.87
1932 2461 5.890985 TGATGTAGAGGAAGGAGAAGAGAAG 59.109 44.000 0.00 0.00 0.00 2.85
1933 2462 5.832221 TGATGTAGAGGAAGGAGAAGAGAA 58.168 41.667 0.00 0.00 0.00 2.87
1934 2463 5.445069 CTGATGTAGAGGAAGGAGAAGAGA 58.555 45.833 0.00 0.00 0.00 3.10
1935 2464 4.037923 GCTGATGTAGAGGAAGGAGAAGAG 59.962 50.000 0.00 0.00 0.00 2.85
1936 2465 3.957497 GCTGATGTAGAGGAAGGAGAAGA 59.043 47.826 0.00 0.00 0.00 2.87
1937 2466 3.069443 GGCTGATGTAGAGGAAGGAGAAG 59.931 52.174 0.00 0.00 0.00 2.85
1938 2467 3.034635 GGCTGATGTAGAGGAAGGAGAA 58.965 50.000 0.00 0.00 0.00 2.87
1939 2468 2.246067 AGGCTGATGTAGAGGAAGGAGA 59.754 50.000 0.00 0.00 0.00 3.71
1940 2469 2.676748 AGGCTGATGTAGAGGAAGGAG 58.323 52.381 0.00 0.00 0.00 3.69
1941 2470 2.768527 CAAGGCTGATGTAGAGGAAGGA 59.231 50.000 0.00 0.00 0.00 3.36
1942 2471 2.158842 CCAAGGCTGATGTAGAGGAAGG 60.159 54.545 0.00 0.00 0.00 3.46
1943 2472 2.503356 ACCAAGGCTGATGTAGAGGAAG 59.497 50.000 0.00 0.00 0.00 3.46
1944 2473 2.551270 ACCAAGGCTGATGTAGAGGAA 58.449 47.619 0.00 0.00 0.00 3.36
1945 2474 2.254152 ACCAAGGCTGATGTAGAGGA 57.746 50.000 0.00 0.00 0.00 3.71
1946 2475 2.366916 CCTACCAAGGCTGATGTAGAGG 59.633 54.545 15.84 3.81 35.64 3.69
1947 2476 3.300388 TCCTACCAAGGCTGATGTAGAG 58.700 50.000 15.84 8.92 43.31 2.43
1948 2477 3.300388 CTCCTACCAAGGCTGATGTAGA 58.700 50.000 15.84 5.65 43.31 2.59
1949 2478 2.224161 GCTCCTACCAAGGCTGATGTAG 60.224 54.545 9.99 9.99 43.31 2.74
1950 2479 1.762957 GCTCCTACCAAGGCTGATGTA 59.237 52.381 0.00 0.00 43.31 2.29
1951 2480 0.543749 GCTCCTACCAAGGCTGATGT 59.456 55.000 0.00 0.00 43.31 3.06
1952 2481 0.179034 GGCTCCTACCAAGGCTGATG 60.179 60.000 0.00 0.00 43.31 3.07
1953 2482 0.621571 TGGCTCCTACCAAGGCTGAT 60.622 55.000 0.00 0.00 43.31 2.90
1954 2483 0.621571 ATGGCTCCTACCAAGGCTGA 60.622 55.000 0.00 0.00 44.65 4.26
1955 2484 1.131638 TATGGCTCCTACCAAGGCTG 58.868 55.000 0.00 0.00 44.65 4.85
1956 2485 1.132500 GTATGGCTCCTACCAAGGCT 58.868 55.000 0.00 0.00 44.65 4.58
1957 2486 0.108774 GGTATGGCTCCTACCAAGGC 59.891 60.000 6.61 0.00 44.65 4.35
1958 2487 1.507140 TGGTATGGCTCCTACCAAGG 58.493 55.000 10.43 0.00 44.32 3.61
1961 2490 4.562767 TCTTATTGGTATGGCTCCTACCA 58.437 43.478 9.23 9.23 45.32 3.25
1962 2491 4.563786 GCTCTTATTGGTATGGCTCCTACC 60.564 50.000 5.02 5.02 39.31 3.18
1963 2492 4.040461 TGCTCTTATTGGTATGGCTCCTAC 59.960 45.833 0.00 0.00 0.00 3.18
1964 2493 4.231273 TGCTCTTATTGGTATGGCTCCTA 58.769 43.478 0.00 0.00 0.00 2.94
1965 2494 3.048600 TGCTCTTATTGGTATGGCTCCT 58.951 45.455 0.00 0.00 0.00 3.69
1966 2495 3.181450 ACTGCTCTTATTGGTATGGCTCC 60.181 47.826 0.00 0.00 0.00 4.70
1967 2496 4.061596 GACTGCTCTTATTGGTATGGCTC 58.938 47.826 0.00 0.00 0.00 4.70
1968 2497 3.455910 TGACTGCTCTTATTGGTATGGCT 59.544 43.478 0.00 0.00 0.00 4.75
1969 2498 3.808728 TGACTGCTCTTATTGGTATGGC 58.191 45.455 0.00 0.00 0.00 4.40
1970 2499 6.016777 GGAAATGACTGCTCTTATTGGTATGG 60.017 42.308 0.00 0.00 0.00 2.74
1971 2500 6.769822 AGGAAATGACTGCTCTTATTGGTATG 59.230 38.462 0.00 0.00 0.00 2.39
1972 2501 6.769822 CAGGAAATGACTGCTCTTATTGGTAT 59.230 38.462 0.00 0.00 0.00 2.73
1973 2502 6.115446 CAGGAAATGACTGCTCTTATTGGTA 58.885 40.000 0.00 0.00 0.00 3.25
1974 2503 4.946157 CAGGAAATGACTGCTCTTATTGGT 59.054 41.667 0.00 0.00 0.00 3.67
1975 2504 4.337555 CCAGGAAATGACTGCTCTTATTGG 59.662 45.833 0.00 0.00 34.65 3.16
1976 2505 4.201990 GCCAGGAAATGACTGCTCTTATTG 60.202 45.833 0.00 0.00 34.65 1.90
1977 2506 3.950395 GCCAGGAAATGACTGCTCTTATT 59.050 43.478 0.00 0.00 34.65 1.40
1978 2507 3.549794 GCCAGGAAATGACTGCTCTTAT 58.450 45.455 0.00 0.00 34.65 1.73
1979 2508 2.677902 CGCCAGGAAATGACTGCTCTTA 60.678 50.000 0.00 0.00 34.65 2.10
1980 2509 1.831580 GCCAGGAAATGACTGCTCTT 58.168 50.000 0.00 0.00 34.65 2.85
1981 2510 0.392193 CGCCAGGAAATGACTGCTCT 60.392 55.000 0.00 0.00 34.65 4.09
1982 2511 1.986575 GCGCCAGGAAATGACTGCTC 61.987 60.000 0.00 0.00 34.65 4.26
1983 2512 2.042831 GCGCCAGGAAATGACTGCT 61.043 57.895 0.00 0.00 34.65 4.24
1984 2513 2.486966 GCGCCAGGAAATGACTGC 59.513 61.111 0.00 0.00 34.65 4.40
1985 2514 1.675310 TGGCGCCAGGAAATGACTG 60.675 57.895 29.03 0.00 35.74 3.51
1986 2515 1.675641 GTGGCGCCAGGAAATGACT 60.676 57.895 33.73 0.00 0.00 3.41
1987 2516 2.700773 GGTGGCGCCAGGAAATGAC 61.701 63.158 33.73 15.73 37.17 3.06
1988 2517 2.361104 GGTGGCGCCAGGAAATGA 60.361 61.111 33.73 0.61 37.17 2.57
1989 2518 3.451894 GGGTGGCGCCAGGAAATG 61.452 66.667 33.73 0.00 39.65 2.32
1990 2519 3.301222 ATGGGTGGCGCCAGGAAAT 62.301 57.895 33.73 18.42 39.65 2.17
1991 2520 3.936772 GATGGGTGGCGCCAGGAAA 62.937 63.158 33.73 16.78 39.65 3.13
1992 2521 4.424711 GATGGGTGGCGCCAGGAA 62.425 66.667 33.73 18.85 39.65 3.36
1995 2524 2.898920 ATTCTGATGGGTGGCGCCAG 62.899 60.000 33.73 17.05 39.65 4.85
1996 2525 2.891941 GATTCTGATGGGTGGCGCCA 62.892 60.000 29.03 29.03 39.65 5.69
1997 2526 2.124151 ATTCTGATGGGTGGCGCC 60.124 61.111 22.73 22.73 0.00 6.53
1998 2527 2.537560 CGATTCTGATGGGTGGCGC 61.538 63.158 0.00 0.00 0.00 6.53
1999 2528 1.889105 CCGATTCTGATGGGTGGCG 60.889 63.158 0.00 0.00 0.00 5.69
2000 2529 1.224592 ACCGATTCTGATGGGTGGC 59.775 57.895 0.00 0.00 42.11 5.01
2003 2532 0.179000 GAGCACCGATTCTGATGGGT 59.821 55.000 0.00 0.00 44.23 4.51
2004 2533 0.178767 TGAGCACCGATTCTGATGGG 59.821 55.000 0.00 0.00 37.19 4.00
2005 2534 2.251409 ATGAGCACCGATTCTGATGG 57.749 50.000 0.00 0.00 0.00 3.51
2006 2535 3.721035 TGTATGAGCACCGATTCTGATG 58.279 45.455 0.00 0.00 0.00 3.07
2007 2536 3.638627 TCTGTATGAGCACCGATTCTGAT 59.361 43.478 0.00 0.00 0.00 2.90
2008 2537 3.023832 TCTGTATGAGCACCGATTCTGA 58.976 45.455 0.00 0.00 0.00 3.27
2009 2538 3.067320 TCTCTGTATGAGCACCGATTCTG 59.933 47.826 0.00 0.00 42.38 3.02
2010 2539 3.291584 TCTCTGTATGAGCACCGATTCT 58.708 45.455 0.00 0.00 42.38 2.40
2011 2540 3.637432 CTCTCTGTATGAGCACCGATTC 58.363 50.000 0.00 0.00 42.38 2.52
2012 2541 3.724508 CTCTCTGTATGAGCACCGATT 57.275 47.619 0.00 0.00 42.38 3.34
2034 2563 1.067582 GTCTTGCTATCGACGGGGG 59.932 63.158 0.00 0.00 0.00 5.40
2035 2564 1.067582 GGTCTTGCTATCGACGGGG 59.932 63.158 0.00 0.00 0.00 5.73
2036 2565 1.299165 CGGTCTTGCTATCGACGGG 60.299 63.158 0.00 0.00 0.00 5.28
2037 2566 1.299165 CCGGTCTTGCTATCGACGG 60.299 63.158 0.00 0.00 0.00 4.79
2038 2567 0.866061 CACCGGTCTTGCTATCGACG 60.866 60.000 2.59 0.00 0.00 5.12
2039 2568 0.454600 TCACCGGTCTTGCTATCGAC 59.545 55.000 2.59 0.00 0.00 4.20
2040 2569 1.337071 GATCACCGGTCTTGCTATCGA 59.663 52.381 2.59 0.00 0.00 3.59
2041 2570 1.067060 TGATCACCGGTCTTGCTATCG 59.933 52.381 2.59 0.00 0.00 2.92
2042 2571 2.890808 TGATCACCGGTCTTGCTATC 57.109 50.000 2.59 1.89 0.00 2.08
2043 2572 2.158900 CCTTGATCACCGGTCTTGCTAT 60.159 50.000 2.59 0.00 0.00 2.97
2044 2573 1.207089 CCTTGATCACCGGTCTTGCTA 59.793 52.381 2.59 0.00 0.00 3.49
2045 2574 0.036010 CCTTGATCACCGGTCTTGCT 60.036 55.000 2.59 0.00 0.00 3.91
2046 2575 0.036388 TCCTTGATCACCGGTCTTGC 60.036 55.000 2.59 0.00 0.00 4.01
2047 2576 1.550524 TCTCCTTGATCACCGGTCTTG 59.449 52.381 2.59 0.00 0.00 3.02
2048 2577 1.550976 GTCTCCTTGATCACCGGTCTT 59.449 52.381 2.59 0.00 0.00 3.01
2049 2578 1.187087 GTCTCCTTGATCACCGGTCT 58.813 55.000 2.59 0.00 0.00 3.85
2050 2579 0.895530 TGTCTCCTTGATCACCGGTC 59.104 55.000 2.59 0.00 0.00 4.79
2051 2580 1.482593 GATGTCTCCTTGATCACCGGT 59.517 52.381 0.00 0.00 0.00 5.28
2052 2581 1.202580 GGATGTCTCCTTGATCACCGG 60.203 57.143 0.00 0.00 38.65 5.28
2053 2582 2.231215 GGATGTCTCCTTGATCACCG 57.769 55.000 0.00 0.00 38.65 4.94
2063 2592 1.035923 TGATGCTCGAGGATGTCTCC 58.964 55.000 25.17 9.79 42.43 3.71
2064 2593 1.599171 CGTGATGCTCGAGGATGTCTC 60.599 57.143 25.17 11.21 39.10 3.36
2065 2594 0.383590 CGTGATGCTCGAGGATGTCT 59.616 55.000 25.17 0.00 0.00 3.41
2066 2595 0.596083 CCGTGATGCTCGAGGATGTC 60.596 60.000 25.17 12.36 0.00 3.06
2067 2596 1.323271 ACCGTGATGCTCGAGGATGT 61.323 55.000 25.17 12.75 0.00 3.06
2068 2597 0.596083 GACCGTGATGCTCGAGGATG 60.596 60.000 25.17 12.07 0.00 3.51
2069 2598 1.037579 TGACCGTGATGCTCGAGGAT 61.038 55.000 20.30 20.30 0.00 3.24
2070 2599 1.037579 ATGACCGTGATGCTCGAGGA 61.038 55.000 15.58 12.84 0.00 3.71
2071 2600 0.596083 GATGACCGTGATGCTCGAGG 60.596 60.000 15.58 0.00 0.00 4.63
2072 2601 0.383590 AGATGACCGTGATGCTCGAG 59.616 55.000 8.45 8.45 0.00 4.04
2073 2602 0.382158 GAGATGACCGTGATGCTCGA 59.618 55.000 0.00 0.00 0.00 4.04
2074 2603 0.596083 GGAGATGACCGTGATGCTCG 60.596 60.000 0.00 0.00 0.00 5.03
2075 2604 0.249657 GGGAGATGACCGTGATGCTC 60.250 60.000 0.00 0.00 0.00 4.26
2076 2605 1.690219 GGGGAGATGACCGTGATGCT 61.690 60.000 0.00 0.00 0.00 3.79
2077 2606 1.227674 GGGGAGATGACCGTGATGC 60.228 63.158 0.00 0.00 0.00 3.91
2078 2607 0.105593 CTGGGGAGATGACCGTGATG 59.894 60.000 0.00 0.00 0.00 3.07
2079 2608 0.325671 ACTGGGGAGATGACCGTGAT 60.326 55.000 0.00 0.00 0.00 3.06
2080 2609 0.970937 GACTGGGGAGATGACCGTGA 60.971 60.000 0.00 0.00 0.00 4.35
2081 2610 1.517832 GACTGGGGAGATGACCGTG 59.482 63.158 0.00 0.00 0.00 4.94
2082 2611 1.686110 GGACTGGGGAGATGACCGT 60.686 63.158 0.00 0.00 0.00 4.83
2083 2612 1.264749 TTGGACTGGGGAGATGACCG 61.265 60.000 0.00 0.00 0.00 4.79
2084 2613 0.991920 TTTGGACTGGGGAGATGACC 59.008 55.000 0.00 0.00 0.00 4.02
2085 2614 1.909302 TCTTTGGACTGGGGAGATGAC 59.091 52.381 0.00 0.00 0.00 3.06
2086 2615 2.342406 TCTTTGGACTGGGGAGATGA 57.658 50.000 0.00 0.00 0.00 2.92
2087 2616 2.422519 CCATCTTTGGACTGGGGAGATG 60.423 54.545 5.01 5.01 46.92 2.90
2088 2617 1.849039 CCATCTTTGGACTGGGGAGAT 59.151 52.381 0.00 0.00 46.92 2.75
2089 2618 1.289160 CCATCTTTGGACTGGGGAGA 58.711 55.000 0.00 0.00 46.92 3.71
2090 2619 3.890527 CCATCTTTGGACTGGGGAG 57.109 57.895 0.00 0.00 46.92 4.30
2099 2628 3.885297 AGACACACAGTTTCCATCTTTGG 59.115 43.478 0.00 0.00 45.15 3.28
2100 2629 4.818546 AGAGACACACAGTTTCCATCTTTG 59.181 41.667 0.00 0.00 31.94 2.77
2101 2630 4.818546 CAGAGACACACAGTTTCCATCTTT 59.181 41.667 0.00 0.00 31.94 2.52
2102 2631 4.384056 CAGAGACACACAGTTTCCATCTT 58.616 43.478 0.00 0.00 31.94 2.40
2103 2632 3.244353 CCAGAGACACACAGTTTCCATCT 60.244 47.826 0.00 0.00 31.94 2.90
2104 2633 3.070018 CCAGAGACACACAGTTTCCATC 58.930 50.000 0.00 0.00 31.94 3.51
2105 2634 2.811873 GCCAGAGACACACAGTTTCCAT 60.812 50.000 0.00 0.00 31.94 3.41
2106 2635 1.475034 GCCAGAGACACACAGTTTCCA 60.475 52.381 0.00 0.00 31.94 3.53
2107 2636 1.230324 GCCAGAGACACACAGTTTCC 58.770 55.000 0.00 0.00 31.94 3.13
2108 2637 1.202698 AGGCCAGAGACACACAGTTTC 60.203 52.381 5.01 0.00 0.00 2.78
2109 2638 0.839946 AGGCCAGAGACACACAGTTT 59.160 50.000 5.01 0.00 0.00 2.66
2110 2639 0.394565 GAGGCCAGAGACACACAGTT 59.605 55.000 5.01 0.00 0.00 3.16
2111 2640 1.476007 GGAGGCCAGAGACACACAGT 61.476 60.000 5.01 0.00 0.00 3.55
2112 2641 1.294780 GGAGGCCAGAGACACACAG 59.705 63.158 5.01 0.00 0.00 3.66
2113 2642 1.459348 TGGAGGCCAGAGACACACA 60.459 57.895 5.01 0.00 0.00 3.72
2114 2643 1.004440 GTGGAGGCCAGAGACACAC 60.004 63.158 5.01 0.00 32.34 3.82
2115 2644 2.217038 GGTGGAGGCCAGAGACACA 61.217 63.158 5.01 0.00 32.34 3.72
2116 2645 2.665603 GGTGGAGGCCAGAGACAC 59.334 66.667 5.01 6.12 32.34 3.67
2117 2646 2.805313 ATCGGTGGAGGCCAGAGACA 62.805 60.000 5.01 0.00 32.34 3.41
2118 2647 2.022240 GATCGGTGGAGGCCAGAGAC 62.022 65.000 5.01 0.00 32.34 3.36
2119 2648 1.758514 GATCGGTGGAGGCCAGAGA 60.759 63.158 5.01 0.00 32.34 3.10
2120 2649 2.025767 CTGATCGGTGGAGGCCAGAG 62.026 65.000 5.01 0.00 32.34 3.35
2121 2650 2.038813 TGATCGGTGGAGGCCAGA 59.961 61.111 5.01 0.00 32.34 3.86
2122 2651 2.503061 CTGATCGGTGGAGGCCAG 59.497 66.667 5.01 0.00 32.34 4.85
2123 2652 3.785859 GCTGATCGGTGGAGGCCA 61.786 66.667 5.01 0.00 0.00 5.36
2124 2653 3.329542 TTGCTGATCGGTGGAGGCC 62.330 63.158 2.89 0.00 0.00 5.19
2125 2654 1.817099 CTTGCTGATCGGTGGAGGC 60.817 63.158 2.89 0.00 0.00 4.70
2126 2655 0.179089 CTCTTGCTGATCGGTGGAGG 60.179 60.000 2.89 0.00 0.00 4.30
2127 2656 0.820226 TCTCTTGCTGATCGGTGGAG 59.180 55.000 2.89 8.46 0.00 3.86
2128 2657 0.820226 CTCTCTTGCTGATCGGTGGA 59.180 55.000 2.89 0.00 0.00 4.02
2129 2658 0.179089 CCTCTCTTGCTGATCGGTGG 60.179 60.000 2.89 0.00 0.00 4.61
2130 2659 0.820226 TCCTCTCTTGCTGATCGGTG 59.180 55.000 2.89 0.00 0.00 4.94
2131 2660 0.820871 GTCCTCTCTTGCTGATCGGT 59.179 55.000 2.89 0.00 0.00 4.69
2132 2661 0.820226 TGTCCTCTCTTGCTGATCGG 59.180 55.000 0.00 0.00 0.00 4.18
2133 2662 1.470632 GGTGTCCTCTCTTGCTGATCG 60.471 57.143 0.00 0.00 0.00 3.69
2134 2663 1.552337 TGGTGTCCTCTCTTGCTGATC 59.448 52.381 0.00 0.00 0.00 2.92
2135 2664 1.554160 CTGGTGTCCTCTCTTGCTGAT 59.446 52.381 0.00 0.00 0.00 2.90
2136 2665 0.972134 CTGGTGTCCTCTCTTGCTGA 59.028 55.000 0.00 0.00 0.00 4.26
2137 2666 0.683973 ACTGGTGTCCTCTCTTGCTG 59.316 55.000 0.00 0.00 0.00 4.41
2138 2667 0.683973 CACTGGTGTCCTCTCTTGCT 59.316 55.000 0.00 0.00 0.00 3.91
2139 2668 0.321122 CCACTGGTGTCCTCTCTTGC 60.321 60.000 0.00 0.00 0.00 4.01
2140 2669 1.274728 CTCCACTGGTGTCCTCTCTTG 59.725 57.143 0.00 0.00 0.00 3.02
2141 2670 1.638529 CTCCACTGGTGTCCTCTCTT 58.361 55.000 0.00 0.00 0.00 2.85
2142 2671 0.902516 GCTCCACTGGTGTCCTCTCT 60.903 60.000 0.00 0.00 0.00 3.10
2143 2672 1.594310 GCTCCACTGGTGTCCTCTC 59.406 63.158 0.00 0.00 0.00 3.20
2144 2673 2.279069 CGCTCCACTGGTGTCCTCT 61.279 63.158 0.00 0.00 0.00 3.69
2145 2674 2.100879 AACGCTCCACTGGTGTCCTC 62.101 60.000 0.00 0.00 0.00 3.71
2146 2675 2.140792 AACGCTCCACTGGTGTCCT 61.141 57.895 0.00 0.00 0.00 3.85
2147 2676 1.961277 CAACGCTCCACTGGTGTCC 60.961 63.158 0.00 0.00 0.00 4.02
2148 2677 0.946221 CTCAACGCTCCACTGGTGTC 60.946 60.000 0.00 0.00 0.00 3.67
2149 2678 1.069765 CTCAACGCTCCACTGGTGT 59.930 57.895 0.00 0.00 0.00 4.16
2150 2679 1.669115 CCTCAACGCTCCACTGGTG 60.669 63.158 0.00 0.00 0.00 4.17
2151 2680 1.696097 AACCTCAACGCTCCACTGGT 61.696 55.000 0.00 0.00 0.00 4.00
2152 2681 0.951040 GAACCTCAACGCTCCACTGG 60.951 60.000 0.00 0.00 0.00 4.00
2153 2682 1.284982 CGAACCTCAACGCTCCACTG 61.285 60.000 0.00 0.00 0.00 3.66
2154 2683 1.006102 CGAACCTCAACGCTCCACT 60.006 57.895 0.00 0.00 0.00 4.00
2155 2684 2.027625 CCGAACCTCAACGCTCCAC 61.028 63.158 0.00 0.00 0.00 4.02
2156 2685 2.342279 CCGAACCTCAACGCTCCA 59.658 61.111 0.00 0.00 0.00 3.86
2157 2686 3.119096 GCCGAACCTCAACGCTCC 61.119 66.667 0.00 0.00 0.00 4.70
2158 2687 3.479269 CGCCGAACCTCAACGCTC 61.479 66.667 0.00 0.00 0.00 5.03
2159 2688 4.295119 ACGCCGAACCTCAACGCT 62.295 61.111 0.00 0.00 0.00 5.07
2160 2689 4.072088 CACGCCGAACCTCAACGC 62.072 66.667 0.00 0.00 0.00 4.84
2161 2690 3.411351 CCACGCCGAACCTCAACG 61.411 66.667 0.00 0.00 0.00 4.10
2162 2691 2.029964 TCCACGCCGAACCTCAAC 59.970 61.111 0.00 0.00 0.00 3.18
2163 2692 2.029964 GTCCACGCCGAACCTCAA 59.970 61.111 0.00 0.00 0.00 3.02
2164 2693 3.998672 GGTCCACGCCGAACCTCA 61.999 66.667 0.00 0.00 0.00 3.86
2174 2703 4.308458 TTGGTCAGCCGGTCCACG 62.308 66.667 1.90 0.00 43.80 4.94
2175 2704 2.668550 GTTGGTCAGCCGGTCCAC 60.669 66.667 1.90 0.00 37.67 4.02
2176 2705 2.847234 AGTTGGTCAGCCGGTCCA 60.847 61.111 1.90 4.45 37.67 4.02
2177 2706 2.358737 CAGTTGGTCAGCCGGTCC 60.359 66.667 1.90 1.53 37.67 4.46
2178 2707 0.321653 ATTCAGTTGGTCAGCCGGTC 60.322 55.000 1.90 0.00 37.67 4.79
2179 2708 0.321653 GATTCAGTTGGTCAGCCGGT 60.322 55.000 1.90 0.00 37.67 5.28
2180 2709 1.026718 GGATTCAGTTGGTCAGCCGG 61.027 60.000 0.00 0.00 37.67 6.13
2181 2710 0.321564 TGGATTCAGTTGGTCAGCCG 60.322 55.000 0.00 0.00 37.67 5.52
2182 2711 1.168714 GTGGATTCAGTTGGTCAGCC 58.831 55.000 0.00 0.00 0.00 4.85
2183 2712 0.798776 CGTGGATTCAGTTGGTCAGC 59.201 55.000 0.00 0.00 0.00 4.26
2184 2713 1.442769 CCGTGGATTCAGTTGGTCAG 58.557 55.000 0.00 0.00 0.00 3.51
2185 2714 0.036164 CCCGTGGATTCAGTTGGTCA 59.964 55.000 0.00 0.00 0.00 4.02
2186 2715 0.323629 TCCCGTGGATTCAGTTGGTC 59.676 55.000 0.00 0.00 0.00 4.02
2187 2716 0.324943 CTCCCGTGGATTCAGTTGGT 59.675 55.000 0.00 0.00 0.00 3.67
2188 2717 0.392998 CCTCCCGTGGATTCAGTTGG 60.393 60.000 0.00 0.00 0.00 3.77
2189 2718 1.026718 GCCTCCCGTGGATTCAGTTG 61.027 60.000 0.00 0.00 0.00 3.16
2190 2719 1.299976 GCCTCCCGTGGATTCAGTT 59.700 57.895 0.00 0.00 0.00 3.16
2191 2720 1.903877 CTGCCTCCCGTGGATTCAGT 61.904 60.000 10.59 0.00 31.18 3.41
2192 2721 1.153289 CTGCCTCCCGTGGATTCAG 60.153 63.158 0.00 1.52 0.00 3.02
2193 2722 1.612146 TCTGCCTCCCGTGGATTCA 60.612 57.895 0.00 0.00 0.00 2.57
2194 2723 1.144936 CTCTGCCTCCCGTGGATTC 59.855 63.158 0.00 0.00 0.00 2.52
2195 2724 1.613630 ACTCTGCCTCCCGTGGATT 60.614 57.895 0.00 0.00 0.00 3.01
2196 2725 2.039624 ACTCTGCCTCCCGTGGAT 59.960 61.111 0.00 0.00 0.00 3.41
2197 2726 2.680352 GACTCTGCCTCCCGTGGA 60.680 66.667 0.00 0.00 0.00 4.02
2198 2727 3.775654 GGACTCTGCCTCCCGTGG 61.776 72.222 0.00 0.00 0.00 4.94
2199 2728 3.775654 GGGACTCTGCCTCCCGTG 61.776 72.222 0.00 0.00 38.24 4.94
2208 2737 4.463879 CCAGCAGGCGGGACTCTG 62.464 72.222 4.30 0.00 32.98 3.35
2209 2738 3.991924 ATCCAGCAGGCGGGACTCT 62.992 63.158 15.28 0.00 42.66 3.24
2210 2739 3.474570 ATCCAGCAGGCGGGACTC 61.475 66.667 15.28 0.00 42.66 3.36
2211 2740 3.790437 CATCCAGCAGGCGGGACT 61.790 66.667 15.28 2.91 42.66 3.85
2212 2741 2.731571 TACATCCAGCAGGCGGGAC 61.732 63.158 15.28 0.00 42.66 4.46
2213 2742 2.364973 TACATCCAGCAGGCGGGA 60.365 61.111 15.31 15.31 43.88 5.14
2214 2743 2.203070 GTACATCCAGCAGGCGGG 60.203 66.667 3.91 3.91 33.74 6.13
2215 2744 1.522355 CTGTACATCCAGCAGGCGG 60.522 63.158 0.00 0.00 33.74 6.13
2216 2745 1.086067 CACTGTACATCCAGCAGGCG 61.086 60.000 0.00 0.00 35.83 5.52
2217 2746 0.036010 ACACTGTACATCCAGCAGGC 60.036 55.000 0.00 0.00 35.83 4.85
2218 2747 1.002430 ACACACTGTACATCCAGCAGG 59.998 52.381 0.00 0.00 35.83 4.85
2219 2748 2.462456 ACACACTGTACATCCAGCAG 57.538 50.000 0.00 0.00 35.83 4.24
2229 2758 1.131693 CGATGAGCGGTACACACTGTA 59.868 52.381 0.00 0.00 36.03 2.74
2230 2759 0.109272 CGATGAGCGGTACACACTGT 60.109 55.000 0.00 0.00 36.03 3.55
2231 2760 0.109272 ACGATGAGCGGTACACACTG 60.109 55.000 0.00 0.00 46.49 3.66
2232 2761 1.131883 GTACGATGAGCGGTACACACT 59.868 52.381 0.00 0.00 46.49 3.55
2233 2762 1.131883 AGTACGATGAGCGGTACACAC 59.868 52.381 0.00 0.00 46.49 3.82
2234 2763 1.456296 AGTACGATGAGCGGTACACA 58.544 50.000 0.00 0.00 46.49 3.72
2235 2764 3.892918 ATAGTACGATGAGCGGTACAC 57.107 47.619 0.00 0.00 46.49 2.90
2236 2765 4.453478 CCTAATAGTACGATGAGCGGTACA 59.547 45.833 0.00 0.00 46.49 2.90
2237 2766 4.142730 CCCTAATAGTACGATGAGCGGTAC 60.143 50.000 0.00 0.00 46.49 3.34
2238 2767 4.005650 CCCTAATAGTACGATGAGCGGTA 58.994 47.826 0.00 0.00 46.49 4.02
2239 2768 2.818432 CCCTAATAGTACGATGAGCGGT 59.182 50.000 0.00 0.00 46.49 5.68
2240 2769 3.079578 TCCCTAATAGTACGATGAGCGG 58.920 50.000 0.00 0.00 46.49 5.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.