>input_sequence_85607
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------ATGGCTTCATCCGGTTCCATGACGAGTCCACTGTGTGCTAACCAAGAAGACATGCCGAACAAGTGGGATGACGC
ATATTTGGACAAGGTGACGGAGAAAGATGTCAACATCCCGCCATGTTGGTGTGGAGATGTTTGCAAGGTGAAGGTGTCCA
CCGGCCGAAAGAAGTCATGGACGAAAGGGAGGAGATATTTTGTATGCCCGAACTATGCTTATGATCATGCGATACCAACT
AACGCCTATGACCAACCACCGGTAAGCTAG--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
>chr5A_1_TraesCS5A01G392200
AAAAGGACCTTGTGAACCAAAA-TGTGTGCTACTATGTGCTATGAGTCCTAAATGACTGTGTGCTATGTGTTTTGGACAA
CTATATGTGCTATAACTCCTTTATGTGTGTATGACTATGTGATTTGGACAACTCTATGTGCTATGTCTCCTTTATGTGTT
TTGGACTATTGTATGTGCTATTACTTATGATTATGTGACAT--------------------AGTATGCCAACCACAAAAC
CCAAAAAGCATTTGGTATGTGAAATCAGCAGACAGTGCAGCGCCCAGGGTTAAGGCGTTGCAC-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------TGTCTAGTGTAGCACCCGACCCATAG
GCGTTGCACA--------------------CAGG-AAAACTTACTGGACTGCTTCTGTTGCTCTCTGGAT-AGCAGTGTC
CAGACGTGCAGTGCCTAAGGTAGGGGCGCTATAGTATGTGCGCTGCACCCTAT---------------------------
-------------------GCCTGACGCATGGGCGGTGCACCCTAACTTAGAAAAGTTTCGGAGGGAATAG---------
----------------------------------------------------------------------TGCAGCGCCT
CTCCCTTGGGTGCTGCACATCTGGACATGCCAGTCCAGAGAGCAGCATAACGTTTCCAGTAGCCATTCGAGCTGTCTAGC
GCCTAAGGGCTAGCCGATGCACGTTTTAATGTGCAGCGCCTAGCCCTTAGGCGTTGCACAGCTGTGTGTCACTTAGATTG
CACCC-ACC-----------C-------------------------ACCCCCACCCCACACACAAACCCAAAGCTCAGTG
CCTCCCCTCTGCCCTCCTCTCTCCCCCTCTCAAATCCTTCTCAAATT---------CGGAGATTTTGTCCGTGGATCTTG
AAGCCAACCCCTCCCTTAAGGTAATCTCCTCCTATCCCCTCGTTT-CATCCAAATGAATTCTCACATTACCTCAAATCCT
GCTAGTTTGGGGAAACCCTAGTTGTTGATTGGATTTGGAAATTTGTGTGGAAATTTGTTGGGAAACCCTAGTTTTGGCTA
GGGTTAGGCATTTGAATGTGTTCATGCATTTACCTATGTACATGTCAATGTGTTGAAATTTGTGGGGAAACCCTAGTTTT
GTAGGCATGGCTTCATCCGGTTCCATGACGAGTCCACTGTGTGCTAACCAAGAAGACATGCCGAACAAGTGGGATGACGC
ATATTTGGACAAGGTGACGGAGAAAGATGTCAACATCCCGCCATGTTGGTGTGGAGATGTTTGCAAGGTGAAGGTGTCCA
CCGGCCGAAAGAAGTCATGGACGAAAGGGAGGAGATATTTTGTATGCCCGAACTATGCTTATGATCATGCGATACCAACT
AACGCCTATGACCAACCACCGGTAAGCTAGATAAGTCAAATGTTACTCTCAAATGTGTGTCAACACTAACAAATT--TTT
TGTATGCAGTCACCGCCTCCTCTATGCAAGTACTTCACGTGGATAGATCATGAAGTGCCAGAAGATGTCCAAAAGGACCA
ATATCAAGATTGTCTTAGGCGCCAGCGATGGTTCGAAGAATCATTTCGACAAGGCTTGGAGGAAGAGCATCGTCAAAAGG
AGAGGATGGAGCGGAAGGAATGAGAGAAGGAGAGGGCACACCAAGCAAAACTTACTCATGAGGAGGAGAGGGCAAGGAAG
CTTGCAAAGGCTCGCGAGGCGCAAGAGAAGGATTCGGCACGTGACAGGAAGGGGAAATGGCCTCACTCGACTCAGTAGGG
ACTTCGCTTCGGTGCACTCGTCATGGAACCTGATGTATCCATGCCGTATTTTTCATGAATGTGTCGTGAACTTGTGAGGT
TATGTGATATGTTGGTGAACTCTTAGTAGTGTGCTACTTGTGTTTGCGAAGTTGTATTCTTTCCTGTGGAGTCAGGAAAT
AAAGTCCTCAAGACAATGTACCACATATAGACACGAGCATGTGTCTGGATCACATTATCAGTGGCATCCGCAGGGCAATG
CGCAAAGTTCCTTTGAATCCACGTGAAAGCAGCTCCGGCTCCTTTCCTTTCCTTCTTCTTCTTCTCTTCTCCTTCCTCTA
CATCAGCCTTGGTAGGAGCCATACCAATAAGAGCAGTCATTTCCTGGCGCCACCCATCAGAATCGGTGCTCATACAGAGA
GCCCCCCGTCGATAGCAAGACCGGTGATCAAGGAGACATCCTCGAGCATCACGGTCATCTCCCCAGTCCAAAGATGGAAA
CTGTGTGTCTCTGGCCTCCACCGATCAGCAAGAGAGGACACCAGTGGAGCGTTGAGGTTCGGCGTGGACCGGCTGACCAA
CTGAATCCACGGGAGGCAGAGTCCCGCCTGCTGGATGTACAGTGTGTACCGCTCATCGTACTATTAGGGAAC
>chr5D_6
-----GACCTTGTGAACCAAAA-TGTGTGCTACTATGTGCTATGAGTCCTAAATGACTATGTGCTATGTGTTTTGGACAA
CTCTATGTGCTATGTCTCCTTTATGTGTGTATGACTATGTGATTTGGACTACTCTATGTGCTATGTCTCCTTTATGTGTT
TTGGACTACTGTATGTGCTATTACTTATGGTTATGTGACAT--------------------AGTATGCCAACCAAAAAAC
CTAAAAAGCATTTGGTATGTCAAATCAGCAGATAGTGCAGCGCCCAGGGCTGAGGCGTTGCAC-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------TGTGTAGTGCAGCACCCGGCGCATAG
ACGCTGCACA--------------------CTGG-AAAACCTACTGGAATGCTTCTGTTGCTCTCTGGAC-TGGCATGTC
CAGATGTGCAGCGCCTAAAGGACGGGCGCT--------------------------------------------------
---------------------------------------------------------------------AG---------
----------------------------------------------------------------------TGCAGCGCCT
CTCCCTTAGGCGCTCCACATGTGGACATGCCAGTCCAGAGAACAACATAA-----------GCCATTCGAGCTATGCAGC
GCCTAAGGGC-------------------------------------TAGGCGCTGCACAGCTGTGTGTCACTTAGGCTG
CACCC-ACC-----------CCCTCCCACCCACC-CCAGCCCACACACACACACCCCACACACAAACACGAACCTCAGTG
CCTCCCCTCTGCCCTCTTCTCTCCCCCTCTCAAATCCTTCTCAAATC---------CAGAGATTTTGTCCGTGGGTCTCA
AAGCGAACCCCTCCCTTAAGGTAATCTCCTCCGATCCCCTCGTTTTCATCCAAATGAATTCTCACATTACCTCAAATCCT
GCTAGTTTGGGGAAACCCTAGTTGTTGATTGGATTTGGAAATTTGTGTGGAAATTTGTTGGGAAACCCTAGTTTTGGCTA
GGGTTAGGCATTTGAATGTGTTCATGCATTTACCTATGTACATGTCAATGTGTTGAAATTTGTGGGGAAACCCTAGTTTT
GTAGGCATGGCTTCATCCGGTTCCATGACGAGGCCACCGTGTGCTAACCAAGAAGACATGCCGAACAAGTGGGAGGACGC
ATCTTTGGACAAGGTGAAGGAGAAAGATGTCAACATCCCGCCATGTTGGTGTGGAGATTTTTGCAAGGTGAAGGTGTCCA
CCGACCGAAAGAAGTCATGGACGGAAGGGAGAAGATATTTTGTATGCCCGAACTATGCTTATGATCGTGCGCTTCCAACT
AACGCCTATGACCAACCACCGGTAAGCTAGAGAAGTAAAATGTTACTCTCAAATGTGTGTCAACACTAACAAAAC--TTC
TGTATGCAGTCACCGCCTCCTCTATGCAAGTACTTCACGTGGATAGATCATGAAGTGCCAGAAGATGTCCAAAAGGACCA
ATATCAAGTTTGTCTTAGGTGCCAGCGGCGGTTCGAAGAATCGTTTCGAAGAGGCTTGGAGGAAGAGCGTCGTCAAAAGG
AGAGGATGGAGCGGAAGAAATGAGAGGAGGAGAGGGCACGCCAAGCGAAACTTGCTCGTGAGGAGGAGAGGGCAAGAAAG
CTTGCAAAGGCTCGCGAGGCGCAAGAGGAGGATTCGGCACGTGACAAGAAGGGGAAATGGCCTCGCTCGACTCAGTAGGG
ACTTCGCTTCGGTGCACTCGTCATGGAACCAGATGTATCCATGCCGTATTTTTCATGAATTTGTCGTGAGCTTGTGAGGT
TATGTGATATGTTGGTGAACTCTTAGTAGTGTGCTACTTGTGTTTGCGAAGTTGTA------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
>chr1A_6
-----GACCTTGTGAACCAAAA-TGTGTGCTACTATGTGCTATGAGTCCTAA------ATGA-CTATGTGTTTTGGACAA
CTCTGTGTGCTATAACTCCCTTATGTGTGTATGACTATGTGATTTGGACTACTCTATGTGCTATGTCTCCTTTATGTGTT
TTGGACTACTA--------------------TATGTGACAT--------------------ACTATGCGAACCACAAAAC
CAAAAAAGTAATTGGTATTTGAAATCAGCAGACAGTGTAGCGCCCAGCTGTTGGGCGCTGCAC-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------TGTCTAGTGCAGTGCCTGACGCATGG
GCGCTGCACCCTTACTTAGAGAAATTTTGGCAAG-AAAAGCTACTGGAATCATTCTGTTGCTCTCTGGAC-AGGCATGTC
CAGATGTGCAGCGCCTAAGGGAGAGGCGCTG-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------TGTAGC
AACTAAGGGCTAGGCACCGCACATGTTAATGTGCAACGCCTGGGCCTTAGGCGCTGCACATCTGTGTGTCACTTAGGCTG
CACCC-TCCCCCCTCCTACCC-------------------------A-CCCCACCCCACACACAAACCCGAAGCTCAACG
CCTCCCCTCTGCCCTCCTCTCTCCCCCTCTCAAATCCTTCTCAAATC---------CGGAGATTTTGTCCATGGATCTCG
AAGCCAACCCCTCCCTTAAGGTAATCTCCTCCGATCCCCTTGTTTTCATCCAAATGAATTCCCACCTTACCTCAAATCCT
GCTAGTTTGGGGAAACCCTAGTTGTTGATTGGATTTGGAAATTTGTGTGGAAATTTGTTGGGAAACCCTAGTTTTGGCTA
GGGTTAGGCATTTGAATGTGTTCATGCATTTACCTATGTACATGTCAATGTGTTGAATTTTTTGGGGAAACCCTAGTTTT
GTAGGCATGGCTTCATCCGGTTCCATGATGAGGCCACCGTGTGCTAACCAACAAGACATGCCAAACAAGTGGGAGGACCT
ATCTTTGGACAAGGTGAAGGAGAAATATGTCAACATCCCGCCATGTTGGTGTGGAGATGTTTGCAAGGTGAAGGTGTCCA
CCGACCGAAAGAAGTCATGGACGGAAGAGAGCAAATATTTTGTATGCCTGAACTATGCTTATAATTGTGCGCTTCCAACT
AACGCCTATGACCAACCACCAGTAAGCTAGAGAAGTAAAATGTTACTCTCAAATGTGTGTCAGCACTAACAAAAT--TTT
TGTATGCAGTCACCGCCTCCTCTATGCAAGTACTTCACGTGGATAGATCATGAAGTGCCAGAAGATGTCCAAAAGGACCA
ATATCAAGATTGTCTTAGGAGCCAGCGCCGGTTCGAAGAATCATTTTGAAGAGGCTTGGAGGAAGAGCGTCGTCAAAAGG
AGAGGATGGAGCGGAAGAAACGAGAGGAGGAGAGGGCACGCCAAGCGAAACTTGCTCGTGAGGAGGAGAGGGCAAGAAAG
CTTGCAAAGGCTCGTGAGGCGCACGAGGAGGATTCGGCACGTGACAAGAAGGGGAAATGTCCTTGCTCGACTCAGTAGGG
ACTTCGCTTCGGTGCACTCATGATGGAACCGGATGTATCCATGCCATATTTTTCACGAA---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
>chr4B_6
-----GACCTTGTGGACCAAAATTGTGTGCTACTATGTGCTATGAGTCCTAA------ATGA-CTATGTGTTTTGGACAA
CTCTATGTGCTATAACTCCTTTATGTGTGTATGACTATGTGATTTGGACTACTCTATGTGCTATGTCTCCTTTATGCGTT
TTGGACTACTA--------------------TATGTGATATCACTTATGATTATGTGACAT-CTATGCGAACCACAAAAC
ATAAAAAGCAATTGGTATTTGAAATCAGTAGACAGTGCAGCGCCCAGCTGTTGGGCGCTGCACCT---------------
--------------------TGACTTAGAATATTTTTGGCAAGAAAAGCTACTGGCACCGTTTTATTTCTCTCTGGGCTG
GCATGTCCAGATGTGCAGTGC--------------------------------------------AGGCGCTGCACATCT
GGACATGCCAGTCCAGAGAGCAACATAACGTTTCCAGTAGCTATTTGAGCCAAAAAATCCCTAAGTCAGGGTGCAGCGCC
--------------------------------------------------------------------------------
-----------------------------------CAGAGCTATTGGAAACGTTCTATTGCTCTCTGGAC-TGGCATGTC
CAGATGTGCAACACCTAAGGGAGAGGCGCTGCACTATC------------------------------------------
--------------------------------------------------------------------TAG---------
----------------------------------------------------------------------TGCAGCGCCT
GTCCCTTAGGCGTTGCACATCTGGACATGCCAGTCCAGAGAGCAACAGAACGGTGCCAACGGCTATTCGAGCAGTGTCGC
ACCCAAGGGCTAGGCGCCGCACATGTTAATGTGCAGCGCCTAGACCTTAGGCGCTACACATATGGACATCACTTAGGCTG
CACCC-ACCCCCT-CCCACAC-------------------------ACACCCACCCCACACACAAACCCGAAGCTCAATG
CCTCCCCTCTGCCCTCATCTCTCCCCCTCTCAAATCCTTCTCC---------AATCCGGAGATTTTGTCTGTGGATATCA
AAGCCAACCCCTCCCTTAAGGTAATCTCCTCCGATCCCCTCATTTTCATCCAAATGAATTCTCACATTACCGCAAATCCT
GCTAGTTTGGGGAAACCCTAGTTGTTGATTGGATTTGAAAAATTGTGTGGAAATTTGCTGGGAAACCCTAGTTTTGGCTA
GGGCTAGGCATTTGAATGTGTTCATGCATTTACCTATGCACATGTCAATGTGTTGAACTTTGTGGGGAAACCCTAGTTTT
GTAGGCATGGCTCCATCTGGTTCCATGACGAGGCCACCGTGTGCTAACCAAGAAGACATGCCGAACAAGTGGGAGGACGC
ATCTTTGGACAAGGTGAAGGAGAAAGATGTCAACATCCCGCCATGTTGGTGTGGAGATGTTTGCAAGGTGAAGGTGAACA
CCAACCGAAAGAAGTCATGGATGGAAGGGCGGATATATTTTGTATACCTAAACTATGCTTATGACCGTGCGCTTCCAACT
AACGCCTATGACCAACCACCGGTAAGCTCGAGAAGTAAAATGTTACTCTCAAATGTGTGTCAACACTAACAAAAA--ATT
TGTATGCAATCACCGCCTCCTCTATGCAAGTACTTCACGTGGATAGATCATGAAGTGTGACAAGATGTTCAAAAGGACCA
ATATCAAGATTGTCTTAGGCGCTAGCGGCGG-------------TTCGAAGAGGCTTGGAGGAAGAGCATCGTAAAAAGG
AGAAGATGGAGCGAAAGAAACGAGAGGAGGAGAGGGCACGCCAAGCGAAACTTGCTCGTGAGGAGGAGAGGGCAAGAAAG
CTTGCAAAGGCTCGTGAGGCGCAAGAGTAGGATTTGGCACGTGACTAGAAGGGGAAATGGCCTCGCTCTACTCAGTAGGG
ACTTCGCTTCGGTGCACTCGTCATGGAGCCGGATGTATCCATGCCGTATTTGTCATGAA---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
>chr2B_10
---------TTGTGAATCAAAA-TGTGTGTGA-TATGTGCTATGACTCCTTTATGTCTATGA-CTATGTGTTTTGAACTA
TTCTATGTGTTATAACTCATTTATGTGTGTATGACTATGTGATTTGGACTAATCTATGTGATATGTCTCCTTTAGATGTT
TTGGACTACTA--------------------TATATGATATTACTTATGATTATGTGACATAGTATGCGAACCACAAAAC
CTAAATAGCAGTTGGAATTTGAAATCAACAGACAGTGCAACGCCCAGCTGTTAGGCGCTGCACAACACAGTGCAACGCCT
GATCCATAGGCGTTGCACAATGACTTGGTGAAATTTTGCCC---------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------CC
--------------------------------------------------------------------------------
-----------------------------------AAAACCTATTGGAAGCGTTCTGCTGCTCTCTAG-T-AGCCGTGTC
CAGATGTGCAACGCCTAAGGGAGAGGCGATGCACTGTCTCAGGCGCTGCATGATGCAGTGCAGCTCCCAGTCCTGAGGCG
TTGCACTGTCTTGTGCAGCGCCTGAGACCTAGGCACTGCAAACAGACTTAGAGAATTTCTGCCCCGAAAACCTATGGAAT
GCTTCTGTTGCTCTATGGTTAGCCATGTCCATATGTGCAGCGCCTAAGCCAAAGGCGCTGCACTACATATTGCAGCGCCC
CTCTCTTAGGCGATGCACATCTGGACATGACTAACCAGAGAGCAACAGAAGCATTCCAATAGCCATTCAAGCTGTGCAGC
GCCTAAGGGCTAGGTGCCACACATGTTATC-TGCAGCGCCTAGTCCTTAGGCGATGCACATCTGTGTGTCACTTAGGCTG
CCCCC-ACCCCCCTCCCACCC-------------------------A-CCCCCACCCACATACAAACCCGAAGCTCAGTG
CCTCCCCTCTGCCCCCCTCTC-TCCCCTCTCAAATCCTTCTCAAATCTTCCAAATCCGGAGCTTTTGTTCGTGGATCTCA
AAGCAAACCCCTCCCTTAAGGTAATCTCCTCCGATCCCCTCGTTTTCATCCAAAGGAATTGTCACATTAGCTCAAATCTT
GCTAGTTTGGGGAAACCCTAGTTGTTGCTTGGATTTGGAAATTTGTGTGAAAATTTGTGGGGAAACCCTAGTTTTGGCTA
GGGTTAGGCATTTGAATGTGTTTATGCATTTACCTCTATACATGCTAATGTGTTGAAATCTGTGGGGAAACCCTAGTTTT
GTAGGCATGGCTTCTTCCAGTTCCATGATGAGGCCACCGTGTGCTAACCAAGAAGACATGCCGAACAAGTGGGAAAATGC
GTCTTTGGACAAGGTGAAGGAGAAAGATGTGAACATCCCACCA--TTGCTGTGGAGATGTTTGCAAGGTGAAGGTGTCCA
TCGGCCGAAAGAAGTCATGGACGGAAGGGAGGAGATAATTTGTATGCCCCAACTATGCTTATGATCGTGCGCTTCCAACA
AATGCCTATGACCAACCACCGGTATGCTAGAGAAGTAACATGTTACTCTCAAATGTGTGTCAACACTAACAAAAT--TTT
-GTATGCAGTCATCGCCTCCTCTATGGAAGTACTTCACGTGGATAGAT-ATGAAGTGCCAGAAGATGTCCAAAAGGACCA
ATATCAAGATTGTCTTAGGCG-CAGCGGCAGTTTGAAGAATCGCTTTGAAGAGGCTTGGAAGAAGAGCGTCGTCAAAAGG
AGAGGATGGAATGGAAGAGATGAGAGGAGGAGAGGGCATGCCAAGCAAAACTTGCTCGTGAGGAGGAGAGGGCAAGAAAC
CTTGCAAAGGCTGGCAAGGCGCAAGAGGAGGACGAGTCATGTGACAAGAAGGGGAAATAGCCTCGCTCGACTTAGTAGGG
A-TTTGCTTCAGTGCACTCATCATGGAACCGGATATACCCATGACATATTTGTCATGAA---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
>chr2B_11
----------TGTGAACCAAAA-TGTGTGACA-TATGTGCTATGACTCCTTTATGTCTATGA-CTATGTGTTTTGGACTA
CTCTATGTGCTATAACTCCTTTATGTGTGTATGACTATGTGATTTGGACTACTCTATGTGCTATGTCTCCTTTATGTGTT
TTGGAATACTA--------------------TATGTGCTATTACTTATGATTATGTGACATAGTATGCGAACCACAAAAC
CTAAAAAGCAGTTGGAATTTGAAATCAACAGACAGTGCAACGCCCAACTGTTAGGCGCTGCACAACACAGTGCAGCACCT
GAGCCATAGGCTCTGCACAATGACTTCGTGAAATTTTGCCCCAAAAACCTACTGGAAGCGTTCCGTTGCTCTCCGGTTAG
CCGTGTCTAGATGTGCAGTGCCTAAGGGAGAGACGCTACACTAGACAGTGTAGCGCCTCTCCCTTAGGTGTTGCACATCT
GGACACGGCTAACCAGAGAGCAACAGAATGCTTCCAGTAAGTTTTTGGAGCAAAAAAATTCAAAGTCAGTGTGCAGCGCC
TTTGTGTCAGGCGCTCCACTATGCAGTGCAGCGCCCAATCCTGAGGCGTTGCACTGTCTAGTGCAGTGCCTAAGACCTAG
GCGCTGCAAACAAACTTAGAGAATTTCTGCCCCAAAAAACCTACTAGAATGCTTCTATTGCTCTCTGG-TTAGCCGTGTC
CAGGTGTGTAGCGCCTAAGCGAAAGGCGCTGCACTGC-------------------------------------------
-------------------------------------------------------------------ATAG---------
----------------------------------------------------------------------TGAAGCGCCC
CTCACTTAGGCGCTGCACATCTGGACACGGCTAACCAAAGAGCAACAGAAGCATTCCAGTAGCCATTCGAGCTGTGCAGC
GCCTAAGGGCTAGGTGCCCCACATGTT-ATGTGCAGTGCCTAGTCCTTAGGCACTGCACATCTGTGTGTCACGTAGGCTT
CCCTCAACC-----------CC-TCCCACCCACCGCCACCCCACACTCCCCCATCCCACACACAAACCTGAAGCTCCGTG
CCTCCCCTCTGCCCCC-TCTCTCCCCCTCTCAAATCCTTCTCAAATCTTGCAAATCTGGAGATTTTCTCCATGGCTCTCG
AAGCCAACCCCTCCCTTAAGGTAATTTCATCCGATCCCCTTGTTTTCATCCAAAGGAATTGT--CATTAGCTCAAGTCTT
GCTAGTTTGGGGAAACCCTAGTTGTTGCTTGGATTTGGAAATTTGTGTGGACATTCGTGGGGAAACCCTACTTTTGGCTA
GGGTTAGGCATTTGAATGTGTTTATGCATTTACCTCTATACATGTTAATGTGTTGAAATTTGTGGGGAAACCCTAGTTTT
ATAGGCATGGCTTCATCCAGTTCCATGACGAGGCCACCGTGTGTTAACCAATAAGACATGCCAAACAAGTGGGAGAACAC
ATCTTTGGACAAGGTGAAGGAGAAAGATGTGAACATCCCGCCATGTTGGTGTGGAGATGTTTGCAAGGTGAAGGTGTCCA
CTGACCGAAAGAAGTCATGAACGGAAGGAAGGAGATATTTTGTATGCCCCAACTATGCTTATGATCATGCACTTCCAACA
AACGCCTATGACCAACCACCGGTATGCTAAAGAAGTAACACATTACTCTCAAATGTGTGTCAACACTAAAAAAAA--TT-
-GTATGCAGTCACCGCCTCCTCTATGCAAGTACTTCACGTGGATAAATAATGAAGTGCCAGAAGATGTCCAAAAGGACCA
ATATCAAGATTTTCTTAGGCGCCAGCGGCGGTTCGAAGAATTGCTTCGAAGAGGCTTGGAGGAAGAGCGTCGTCAAAATG
AGAGGATGGAGCGGAAGAAACGAGAGGAGGAGAGGGCACTCCAAGCGAAACTTGCTCGTGAGGAGG--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
>chr4A_76
----------------------------------------------------------------------------ACAA
CTTTATGTGTTATAACTCCTATATGTGTGTATGACTATGTGATTTGGACAACTCTATGTGCTATGTCTCTTTTAAGTGTT
TTGGACTACTG--------------------TATGTGCTATTACTTATGATTATGTGACATAGTATGCCAGCCACAAAAC
CCAAAAAGCATTATGTATGTGAAATCAGCAGACAGAGCAGCGCCCAGGGGTAAGGCGTTGCAGTATCTAGTGCAGCGCTC
GACCCATAGGGGCCGCACACTG--------------------GAAAACCTATTGGACTGC-TCTGTTGCTCTCTGGACTG
GCATGTCCAGATGTGCAGCGCCCAAGGGACAGGCACTGCACTTG----------------------GGCGCTGCACATCT
GGACAAGCTAGTCCAGAGAGCAACACAAGCATTCCAGTAGGTTTTCCCTCCGATAATTTTCTAAG---------------
------------------------------------------------------TGTCTAGTGCAGCGCCTGATGCATGG
GCGCTGCACCCTAACTTAGAAAAATTTCGGAGGG-AAAACCTACTGGAATGCTTCTGTTACTCTCTGGAC-TGGCATGTC
GAGACATGCAGCGCCCAAGGGACAGGCGCTTCACTATC------------------------------------------
--------------------------------------------------------------------TAG---------
----------------------------------------------------------------------TGCAGCGCCC
TTCCCTTGGGCGCGGCACGTCTGGACATGCCAGTCCAGAGAT-----GAAGCATTCCAGTAGCCACTCGAGCTATGCAGC
GCCTAAGAGCTAGGCGCTGCGTGCTTTAATGTGCAGCGCCTAGGCCTTAGGCGCTGCACAGCTGTGTGTCACTTAGGTTG
CAACC-ACC-----------CC-TCCCACCCACCCCCACCCCACAC-------------ACACAAACCCTAAGCTCAGTG
CCTCCCCTCTGCCCTCCTCTCTCCCCCTCTCAAATCC--------------------GGAGATTTTGTCTATGGATCTCG
AAGGCAACCCCTACCTTAAGGTAATCTCCTCCGATCCCCTCATTTTCATCCAAATGAATTCTCACATTACCTCAAATCCT
ACTAGTTTGGGGAAACCCTAGTTGTTGATTGGATTTGGAAATTTGTGTGGAAATTTCTTGGGAAACCCTAGTTTTGGCTA
GGGTTAGGCATTTGAATGTGTTCATGCATTTACCTATGTACATGTCAATGTGTTGAAATTTGTGGGGAAACCCTAGTTTT
GTAGGCATGGCTTCATCCGGTTCCATGACGAGGCCACTGTGTGCTAACCAAGAATACATGCCGAACAAGTGGGAGGACGC
ATCTTTGGACAACGTAAAGGAGAAATATGTCAACATCCCGCCATGTTGGTGTGGAGATGTTTACAAGGTGAAGGTATCTA
CCAACCGAAAGAAGTCATGGACGGAAGGGAGGAGATATTTTGTACGCCCGAACTATGCTTATGATTGTGCGATTCCAACT
AACGCCTATGACCAACCACCGGTAAGCTAGAGAAGTAAAATGTTACTCTCAAATGTGTGTCAACACTAACAAAAA--TTT
CGTATGCACTCACCGCCTCCTCTCTACAAGTACTTCCCGTGGATAGATCATGAAGTGCCAGAAGATGTCCAAAAGGACCA
ATATCAAGACTATCTCAGAAGCCAGCGGAGGTTCAAAGAATCGTTTCGAAGAGGCTTGGAGGAAGAGCGTCGTCAAAAGG
AGAGGGTGGAGCGGAAGAAACGAGAGGAGGAGAGGGCACGCCAAGCGAAACTTGTTCATGAGGAGGAGAGGGCAAGAAAG
CTTGCAAAGGCTCGCGAGGTGCAAGAGGAGGATTCAGCACATGACAAGAAGGGAAAATGGCCTCGCTCGACTCAGTAGGG
ACTTCGCTTCGGTGCACTCGTCATGGAACCGGATGTACCCATGCGGTATTTGTCATGAATGTGTCGCGAACTTGTGAGGT
TATGTGATATGTTGGTGAACTCTTAGTAGTGTTCTACTTGTGTTTGCGAAGTTGTA------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
>chr7B_499
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------CATCTGGACATGCCAGTCCAGAGAGCAACAGAACGCTTCTAGCGGCTATTCGAGCAGTGCAGC
GCCCATGGGCTAGGCGCCGCACATGTTAATGTGCAGCGCCTATGCCTTAGGCGCTGCACATATGGACATCACTTAGGCTG
CACCC-ACCTTCACCCCACAC-------------------------ACCCGCACACCCCACACAAACCCAAAGCTCGGTA
CCTCCCCTCTTCCCTCCTCTC-CCCCCTCTCAAATCCTTCTCAGATC---------CAGTGATTTTGTCCATGGATATCA
AAGCCAACCCCTCCCTTAAGGTAATCTCCTCCGATCCCGTCGTTTTCATCCAGATGAATTCTCACATTACCTCAAATCCT
GCTAGTTTGGGAAAACCCTAGTTGTTTATTGGATTTGGAAATTTGTGTGGAAATATGTTGGGAAACCCTAGTTTTGGCTA
GGGTTAGGCATTTTAATGCGTTCATGCATTTACCTATGTACATGTCAAGGTGTTGAACTTTGTGGGGAACCCCTAGTTTT
GTAGGCATGGCTTCATCCGGTTCCATGATGAGGCTGCCGTGTGCTAACCAAGAAGACATGCGGAACAAGTGGGAGGACGC
ATCTTCGCACAAGGTGAAGGAGAAAGATGTCAACATCCCTCCATGTTGGCATGGAGATGTTTGCAAGGTGAAGGTGTCCA
CCGACCAAAAGAAGTCATGGACGGAAGGGCGGAGATATTTTGTATGCCCGATCTATGCTTATGACCGTGCACTTCCAACG
AACGCCTATGACCAACCACTGGTAAGCTCGAGAAGTAAAATGTTACTATCAAATGTGTGTTAACACTAACAAAAATTTT-
-GTATGCAGTCACCGCCTCCTCTATGCAAGTACTTCACGTGGATAGACCATGAAGTGCTAGAAGATGTCCAAGAGGACCA
ATATCAAGATTGTCTTAGGCACTAGCGGAGGTTCGAAGAATTTTTTCGAAGACGCTTGGAGGAAGAGAGTCGTCAAAAGG
AGAGGATGGAGCGGAAGAAACGAGAGGAGGAGAGGGCACGCCAAGCGAAACTTGCTCTTGAGGATGAGAGGGAAAGAAAG
CTTGCAACGGCTTGCGAGGCGCAAGAGGAGGACTCGGCACATGACAAGAAGGGGAATTGGCCTCGCTCTACTCAGTAGGG
ATTTCGCTCCGTTGCACTCATCATGAAATCGGATGTATCCATGCCGTTTTTTTCATGAA---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
>chr3D_642
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
CACCC-ACCCCACCCCCACCC-------------------------------------CACACAAACCCGAAGCTCAGTG
CCTCCCCTCTGCCCTCCTCTCTCCCCCTCTCAAATCCTTCTCAAATC---------TGGAGATTTTGTCTGTGGATCTCG
AAGCCAACCCCTCCCTTAAGGTAATCTCCTCCAATCCCCTCGTTTTCATCCAAATGAATTCTCACATTACCTCAAATCCT
TCTAGTTTGGGGAAACCCTAGTTGTTGATTGGATTTGGAAGTTTTTGTGGAAATTTGTTGGGAAACCCTAGTTTTGGCTA
GGGTTAGGCATTTGAATGTGTTCATGCATTTACCTATGTACATGTCAATATGTTGAAATTTGTGGGGAAACCCTAATTTT
GTAGGCATGGCTTCATCCGGTTCCATGACGAGGCCACCGTGTGCTAACCAAGAAGACATGTCGAACAAGTGGGAGGACGC
ATCTTTGGACAAGATGAAGGAGAAAGATGTCAACATCCCGCCATGTTGGTGTGGAGATGTTTGCAAGGTGAAGGTGTCCA
CCGACCGAAAGAAGTCATGGACGGAAGGGAGGAGATATTTTGTATGCCCCAACTATGCTTTTGATCGTGCGCTTCCAACT
AACGCCTATGACCAACCACCGGTAAGCTAGAGAAGTAAAATGTTACTCTCAAATGTGTGTCAACACTAACAAAAAATTT-
-GTATGCAGTCACCGCCTCCTCTATGCAAGTACTTCACGTGGATAGATCATGAAGTGCCAGAAGATGTCCAAAAGGACCA
ATATTAAGATTTTCTTAGGCGCCAGCGGTGGTTCAAAGAATCGTTTCGAAGAGGCTCAGAGGAAGAGTGTCATCAAAAGG
AGAGGATGGAGTGGAAGAAACAAGAGGAGGAGAGGGCACGCCAAGCGAAACTTGCTCGTGAGGAGGAGAGGGCAAGAAAG
CTTGCAAAGGCTCGTGAGGCGCAAGAGGAGGACGAGGCACGTGACAAGAAGGGGAAATGGCCTTGCTTGACTCAGTAGGG
ACTTCGATTCAGTGCACTCGTCATGGAACCAGATGTACCCATGCCGTATTTGTCATGAA---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
>chr6D_969
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------GAAATTTGTTGGGAAACCCTAGTTTT
ATAGGCATGGCTTCATCCGGTTCCATGACGAGGCCACCGTGTGCTAACCAAGAGGACATGCCGAACAAGTGGGAGGACGC
ATCTTTGGACAAGGTGAAGGAGAAAGATGTCAACATCCCGCCATGTTGGTGTGGAGATGTTTGCAAGGTGAAGGTGTCCA
CCGACCGAAAGAAGTGTTGGACGGAAGGGAGGAGATATTTTGTATGCCCCAACTATGCTTATGATCGTGCGCTTCCAACT
AACGCCTATGACTAACCACCGGTAAGCTAAACAAGTAAAATGTTATTCTCAAATGTGTGTCAGCACTAACAAAAAATTT-
-GTATGCAGTCACCGCCTCCTCTATGCAAGTACTCCACGTGGATAGATCATGAAGTGCCAGAAGATGTCCAAAAGGACCA
ATATCAAGATTGTCTTAGGCGCCAGCGACGGTTCGAAGAATCATTTCGAAGAGGCTTGGAGGAAGAGCGTCGTCAAAAGG
AGAGGATGGAGCGGAAGAAACGAGAGGAGGAGAGGGCACGCCAACCGGAACATGCTCGTGAGGAGGATAGGGAAAGCAAG
CTTGCAAAGGCTCGCGAGGCGCAAGAGGAGGATGCGGCACATGACAAGAAGGGGAAATGGCCACGCTCGACTCAGTAGGG
ACTTCGCTTCGGTGCACTCATCATAGAACCGGATGCATCCATGCCGTATTTGTCATGAA---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
>SNPs
SSSSS-----------------------------------------------------S---------------------
--S-----------------------------------------------------------------------------
--------S--------------------S--------------------------------------------------
-------------------------------------------------S------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------S----------S-----
---S------------------------------------S-------S-------------------------S-----
-----------S--------S---------SS-S---S-SS-SS--SS-S-SS---------------------------
-------------------------SS-S-S---SS----SS-SS-------S--S--SS-SSSS---------------
--------------------------------------------------------------------------------
----------S---------------------------------S-------S----------------------S----
-------------S--S--------------------------S---------S----------------------S---
--------------------------------------------------------------------------------
----------------------------------------------S-------------------------------S-
--------------------------------S-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------S-----------------------------------------S-----
--S--------------S--------------------------------------------------------------
-----------------------S-------------------------------------------------S------
-------------------------------S----S------------------------------------S------
--------------------------------------------------------------------------------
-------------------------------------------------SS-----------------------------
-----------------S--------S------------S-------------S----------------------S---
---------------------------S------------------S-----------------S---------------
------------------------------S-------------------------------------------------
--------------------------------------------------------SSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_681
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------GCGTTGCACACAGGAAAACT---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
>reverse_2574
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------AGCAAGACCGGTGATCAAGG-----------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
