Multiple sequence alignment - TraesCS5A01G383200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G383200 chr5A 100.000 4321 0 0 1 4321 580951074 580946754 0.000000e+00 7980
1 TraesCS5A01G383200 chr5D 89.544 2563 129 43 1820 4321 460760477 460757993 0.000000e+00 3120
2 TraesCS5A01G383200 chr5D 90.859 722 39 16 581 1279 460761853 460761136 0.000000e+00 942
3 TraesCS5A01G383200 chr5D 88.315 445 19 11 1280 1718 460761102 460760685 1.790000e-138 503
4 TraesCS5A01G383200 chr5D 87.586 145 15 2 344 486 460762261 460762118 9.610000e-37 165
5 TraesCS5A01G383200 chr5D 88.889 108 12 0 3686 3793 374635146 374635039 2.710000e-27 134
6 TraesCS5A01G383200 chr5B 93.935 1385 64 17 2277 3647 566688422 566687044 0.000000e+00 2074
7 TraesCS5A01G383200 chr5B 86.156 744 53 31 582 1283 566690054 566689319 0.000000e+00 758
8 TraesCS5A01G383200 chr5B 93.402 485 32 0 3837 4321 566687033 566686549 0.000000e+00 719
9 TraesCS5A01G383200 chr5B 94.805 308 14 1 30 337 596082131 596082436 3.020000e-131 479
10 TraesCS5A01G383200 chr5B 82.573 482 39 25 1822 2285 566688895 566688441 2.440000e-102 383
11 TraesCS5A01G383200 chr5B 90.385 260 17 4 1279 1530 566689290 566689031 6.920000e-88 335
12 TraesCS5A01G383200 chr5B 84.298 242 6 9 363 596 566695354 566695137 1.570000e-49 207
13 TraesCS5A01G383200 chr4B 95.440 307 14 0 32 338 40215227 40215533 1.400000e-134 490
14 TraesCS5A01G383200 chr1B 95.098 306 15 0 32 337 675768815 675769120 2.340000e-132 483
15 TraesCS5A01G383200 chr3A 94.822 309 15 1 31 338 717621000 717621308 8.400000e-132 481
16 TraesCS5A01G383200 chr2B 94.805 308 16 0 31 338 77779597 77779290 8.400000e-132 481
17 TraesCS5A01G383200 chr2A 94.534 311 17 0 29 339 497695595 497695905 8.400000e-132 481
18 TraesCS5A01G383200 chr7A 94.231 312 18 0 27 338 4784758 4785069 1.090000e-130 477
19 TraesCS5A01G383200 chrUn 94.408 304 17 0 34 337 379959199 379959502 6.540000e-128 468
20 TraesCS5A01G383200 chr3B 92.879 323 21 2 34 356 106701434 106701114 6.540000e-128 468


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G383200 chr5A 580946754 580951074 4320 True 7980.0 7980 100.0000 1 4321 1 chr5A.!!$R1 4320
1 TraesCS5A01G383200 chr5D 460757993 460762261 4268 True 1182.5 3120 89.0760 344 4321 4 chr5D.!!$R2 3977
2 TraesCS5A01G383200 chr5B 566686549 566690054 3505 True 853.8 2074 89.2902 582 4321 5 chr5B.!!$R2 3739

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
507 510 0.030773 CTCATAGCTGGACGCGCTTA 59.969 55.0 5.73 0.00 45.59 3.09 F
1621 1892 0.036294 AGTTAGTTTCCTCCGGCTGC 60.036 55.0 0.00 0.00 0.00 5.25 F
1623 1894 0.036388 TTAGTTTCCTCCGGCTGCTG 60.036 55.0 0.00 0.26 0.00 4.41 F
1833 2215 0.107831 TGTTCTTCTGGGTCCAACCG 59.892 55.0 0.00 0.00 39.83 4.44 F
1979 2368 0.244721 GTTTTGCATCCCTGTCTGGC 59.755 55.0 0.00 0.00 0.00 4.85 F
2195 2591 0.253044 GCATACCACTTGGGAGCTGA 59.747 55.0 0.00 0.00 41.15 4.26 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1718 1993 0.249657 CCTTGGGCTAGAGCTAAGCG 60.250 60.000 12.95 1.57 41.70 4.68 R
2728 3172 1.213182 AGATCTCTCACGACCTGGCTA 59.787 52.381 0.00 0.00 0.00 3.93 R
2779 3223 1.259609 AGGTGGATTTCGACACGGTA 58.740 50.000 0.00 0.00 38.46 4.02 R
2878 3322 2.099098 CCTGTTCAAGAAAAGCGGTTGT 59.901 45.455 0.00 0.00 0.00 3.32 R
2934 3378 2.103094 CACAAGGTGGTCTTCAGAGTCA 59.897 50.000 0.00 0.00 32.41 3.41 R
4004 4462 0.392863 ATGTGGATGCTGCTACGCAA 60.393 50.000 0.00 0.00 44.06 4.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 2.499214 AAAAACTGGGTCTTGCGCA 58.501 47.368 5.66 5.66 38.40 6.09
23 24 0.102300 AAAAACTGGGTCTTGCGCAC 59.898 50.000 11.12 0.00 36.04 5.34
24 25 1.734388 AAAACTGGGTCTTGCGCACC 61.734 55.000 11.12 9.09 36.04 5.01
25 26 4.988598 ACTGGGTCTTGCGCACCG 62.989 66.667 11.12 4.16 36.04 4.94
26 27 4.680237 CTGGGTCTTGCGCACCGA 62.680 66.667 11.12 7.11 36.04 4.69
27 28 4.243008 TGGGTCTTGCGCACCGAA 62.243 61.111 11.12 0.00 34.97 4.30
28 29 3.423154 GGGTCTTGCGCACCGAAG 61.423 66.667 11.12 4.67 34.33 3.79
29 30 2.357034 GGTCTTGCGCACCGAAGA 60.357 61.111 11.12 7.69 0.00 2.87
30 31 1.741770 GGTCTTGCGCACCGAAGAT 60.742 57.895 11.12 0.00 30.72 2.40
31 32 1.298859 GGTCTTGCGCACCGAAGATT 61.299 55.000 11.12 0.00 30.72 2.40
32 33 0.517316 GTCTTGCGCACCGAAGATTT 59.483 50.000 11.12 0.00 30.72 2.17
33 34 1.069227 GTCTTGCGCACCGAAGATTTT 60.069 47.619 11.12 0.00 30.72 1.82
34 35 1.606668 TCTTGCGCACCGAAGATTTTT 59.393 42.857 11.12 0.00 0.00 1.94
56 57 3.394674 TTTTGAGCATCGGTACAGACA 57.605 42.857 0.00 0.00 38.61 3.41
57 58 2.363788 TTGAGCATCGGTACAGACAC 57.636 50.000 0.00 0.00 38.61 3.67
58 59 1.253100 TGAGCATCGGTACAGACACA 58.747 50.000 0.00 0.00 38.61 3.72
59 60 1.616374 TGAGCATCGGTACAGACACAA 59.384 47.619 0.00 0.00 38.61 3.33
60 61 2.036604 TGAGCATCGGTACAGACACAAA 59.963 45.455 0.00 0.00 38.61 2.83
61 62 2.412089 GAGCATCGGTACAGACACAAAC 59.588 50.000 0.00 0.00 0.00 2.93
62 63 1.126113 GCATCGGTACAGACACAAACG 59.874 52.381 0.00 0.00 0.00 3.60
63 64 1.126113 CATCGGTACAGACACAAACGC 59.874 52.381 0.00 0.00 0.00 4.84
64 65 0.386476 TCGGTACAGACACAAACGCT 59.614 50.000 0.00 0.00 0.00 5.07
65 66 0.782384 CGGTACAGACACAAACGCTC 59.218 55.000 0.00 0.00 0.00 5.03
66 67 1.860676 GGTACAGACACAAACGCTCA 58.139 50.000 0.00 0.00 0.00 4.26
67 68 2.413837 GGTACAGACACAAACGCTCAT 58.586 47.619 0.00 0.00 0.00 2.90
68 69 3.581755 GGTACAGACACAAACGCTCATA 58.418 45.455 0.00 0.00 0.00 2.15
69 70 4.181578 GGTACAGACACAAACGCTCATAT 58.818 43.478 0.00 0.00 0.00 1.78
70 71 5.345702 GGTACAGACACAAACGCTCATATA 58.654 41.667 0.00 0.00 0.00 0.86
71 72 5.231568 GGTACAGACACAAACGCTCATATAC 59.768 44.000 0.00 0.00 0.00 1.47
72 73 4.816392 ACAGACACAAACGCTCATATACA 58.184 39.130 0.00 0.00 0.00 2.29
73 74 4.625742 ACAGACACAAACGCTCATATACAC 59.374 41.667 0.00 0.00 0.00 2.90
74 75 3.857665 AGACACAAACGCTCATATACACG 59.142 43.478 0.00 0.00 0.00 4.49
75 76 2.347452 ACACAAACGCTCATATACACGC 59.653 45.455 0.00 0.00 0.00 5.34
78 79 3.916439 CGCTCATATACACGCGCA 58.084 55.556 5.73 0.00 39.11 6.09
79 80 2.434688 CGCTCATATACACGCGCAT 58.565 52.632 5.73 0.00 39.11 4.73
80 81 1.613270 CGCTCATATACACGCGCATA 58.387 50.000 5.73 1.53 39.11 3.14
81 82 1.317611 CGCTCATATACACGCGCATAC 59.682 52.381 5.73 0.00 39.11 2.39
82 83 2.324860 GCTCATATACACGCGCATACA 58.675 47.619 5.73 0.00 0.00 2.29
83 84 2.090658 GCTCATATACACGCGCATACAC 59.909 50.000 5.73 0.00 0.00 2.90
84 85 3.565516 CTCATATACACGCGCATACACT 58.434 45.455 5.73 0.00 0.00 3.55
85 86 3.561503 TCATATACACGCGCATACACTC 58.438 45.455 5.73 0.00 0.00 3.51
86 87 3.003897 TCATATACACGCGCATACACTCA 59.996 43.478 5.73 0.00 0.00 3.41
87 88 2.509052 ATACACGCGCATACACTCAT 57.491 45.000 5.73 0.00 0.00 2.90
88 89 1.835121 TACACGCGCATACACTCATC 58.165 50.000 5.73 0.00 0.00 2.92
89 90 0.806102 ACACGCGCATACACTCATCC 60.806 55.000 5.73 0.00 0.00 3.51
90 91 1.227263 ACGCGCATACACTCATCCC 60.227 57.895 5.73 0.00 0.00 3.85
91 92 1.068083 CGCGCATACACTCATCCCT 59.932 57.895 8.75 0.00 0.00 4.20
92 93 0.313987 CGCGCATACACTCATCCCTA 59.686 55.000 8.75 0.00 0.00 3.53
93 94 1.067565 CGCGCATACACTCATCCCTAT 60.068 52.381 8.75 0.00 0.00 2.57
94 95 2.341257 GCGCATACACTCATCCCTATG 58.659 52.381 0.30 0.00 0.00 2.23
95 96 2.029020 GCGCATACACTCATCCCTATGA 60.029 50.000 0.30 0.00 39.87 2.15
96 97 3.554960 GCGCATACACTCATCCCTATGAA 60.555 47.826 0.30 0.00 41.57 2.57
97 98 3.990469 CGCATACACTCATCCCTATGAAC 59.010 47.826 0.00 0.00 41.57 3.18
98 99 3.990469 GCATACACTCATCCCTATGAACG 59.010 47.826 0.00 0.00 41.57 3.95
99 100 2.604046 ACACTCATCCCTATGAACGC 57.396 50.000 0.00 0.00 41.57 4.84
100 101 1.831106 ACACTCATCCCTATGAACGCA 59.169 47.619 0.00 0.00 41.57 5.24
101 102 2.205074 CACTCATCCCTATGAACGCAC 58.795 52.381 0.00 0.00 41.57 5.34
102 103 1.831106 ACTCATCCCTATGAACGCACA 59.169 47.619 0.00 0.00 41.57 4.57
103 104 2.205074 CTCATCCCTATGAACGCACAC 58.795 52.381 0.00 0.00 41.57 3.82
104 105 1.552792 TCATCCCTATGAACGCACACA 59.447 47.619 0.00 0.00 39.20 3.72
105 106 1.665679 CATCCCTATGAACGCACACAC 59.334 52.381 0.00 0.00 34.84 3.82
106 107 0.389296 TCCCTATGAACGCACACACG 60.389 55.000 0.00 0.00 39.50 4.49
107 108 1.419922 CCTATGAACGCACACACGC 59.580 57.895 0.00 0.00 36.19 5.34
108 109 1.288419 CCTATGAACGCACACACGCA 61.288 55.000 0.00 0.00 36.19 5.24
109 110 0.179250 CTATGAACGCACACACGCAC 60.179 55.000 0.00 0.00 36.19 5.34
110 111 0.876342 TATGAACGCACACACGCACA 60.876 50.000 0.00 0.00 36.19 4.57
111 112 2.350760 GAACGCACACACGCACAC 60.351 61.111 0.00 0.00 36.19 3.82
112 113 3.783588 GAACGCACACACGCACACC 62.784 63.158 0.00 0.00 36.19 4.16
115 116 2.280524 GCACACACGCACACCCTA 60.281 61.111 0.00 0.00 0.00 3.53
116 117 2.604174 GCACACACGCACACCCTAC 61.604 63.158 0.00 0.00 0.00 3.18
117 118 1.959226 CACACACGCACACCCTACC 60.959 63.158 0.00 0.00 0.00 3.18
118 119 2.358247 CACACGCACACCCTACCC 60.358 66.667 0.00 0.00 0.00 3.69
119 120 3.633116 ACACGCACACCCTACCCC 61.633 66.667 0.00 0.00 0.00 4.95
120 121 3.319198 CACGCACACCCTACCCCT 61.319 66.667 0.00 0.00 0.00 4.79
121 122 1.985662 CACGCACACCCTACCCCTA 60.986 63.158 0.00 0.00 0.00 3.53
122 123 1.002533 ACGCACACCCTACCCCTAT 59.997 57.895 0.00 0.00 0.00 2.57
123 124 1.335132 ACGCACACCCTACCCCTATG 61.335 60.000 0.00 0.00 0.00 2.23
124 125 1.046472 CGCACACCCTACCCCTATGA 61.046 60.000 0.00 0.00 0.00 2.15
125 126 0.759346 GCACACCCTACCCCTATGAG 59.241 60.000 0.00 0.00 0.00 2.90
126 127 0.759346 CACACCCTACCCCTATGAGC 59.241 60.000 0.00 0.00 0.00 4.26
127 128 0.341961 ACACCCTACCCCTATGAGCA 59.658 55.000 0.00 0.00 0.00 4.26
128 129 0.759346 CACCCTACCCCTATGAGCAC 59.241 60.000 0.00 0.00 0.00 4.40
129 130 0.400093 ACCCTACCCCTATGAGCACC 60.400 60.000 0.00 0.00 0.00 5.01
130 131 0.104934 CCCTACCCCTATGAGCACCT 60.105 60.000 0.00 0.00 0.00 4.00
131 132 1.343069 CCTACCCCTATGAGCACCTC 58.657 60.000 0.00 0.00 0.00 3.85
132 133 1.343069 CTACCCCTATGAGCACCTCC 58.657 60.000 0.00 0.00 0.00 4.30
133 134 0.469331 TACCCCTATGAGCACCTCCG 60.469 60.000 0.00 0.00 0.00 4.63
134 135 1.457643 CCCCTATGAGCACCTCCGA 60.458 63.158 0.00 0.00 0.00 4.55
135 136 1.048724 CCCCTATGAGCACCTCCGAA 61.049 60.000 0.00 0.00 0.00 4.30
136 137 0.830648 CCCTATGAGCACCTCCGAAA 59.169 55.000 0.00 0.00 0.00 3.46
137 138 1.202580 CCCTATGAGCACCTCCGAAAG 60.203 57.143 0.00 0.00 0.00 2.62
138 139 1.757118 CCTATGAGCACCTCCGAAAGA 59.243 52.381 0.00 0.00 0.00 2.52
139 140 2.482142 CCTATGAGCACCTCCGAAAGAC 60.482 54.545 0.00 0.00 0.00 3.01
140 141 1.270907 ATGAGCACCTCCGAAAGACT 58.729 50.000 0.00 0.00 0.00 3.24
141 142 0.318441 TGAGCACCTCCGAAAGACTG 59.682 55.000 0.00 0.00 0.00 3.51
142 143 0.603569 GAGCACCTCCGAAAGACTGA 59.396 55.000 0.00 0.00 0.00 3.41
143 144 0.605589 AGCACCTCCGAAAGACTGAG 59.394 55.000 0.00 0.00 0.00 3.35
144 145 1.016653 GCACCTCCGAAAGACTGAGC 61.017 60.000 0.00 0.00 0.00 4.26
145 146 0.390472 CACCTCCGAAAGACTGAGCC 60.390 60.000 0.00 0.00 0.00 4.70
146 147 1.153745 CCTCCGAAAGACTGAGCCG 60.154 63.158 0.00 0.00 0.00 5.52
147 148 1.153745 CTCCGAAAGACTGAGCCGG 60.154 63.158 0.00 0.00 41.36 6.13
148 149 2.815647 CCGAAAGACTGAGCCGGC 60.816 66.667 21.89 21.89 33.47 6.13
149 150 2.048222 CGAAAGACTGAGCCGGCA 60.048 61.111 31.54 7.98 0.00 5.69
150 151 1.448540 CGAAAGACTGAGCCGGCAT 60.449 57.895 31.54 14.28 0.00 4.40
151 152 0.179111 CGAAAGACTGAGCCGGCATA 60.179 55.000 31.54 16.21 0.00 3.14
152 153 1.539065 CGAAAGACTGAGCCGGCATAT 60.539 52.381 31.54 8.11 0.00 1.78
153 154 2.139118 GAAAGACTGAGCCGGCATATC 58.861 52.381 31.54 18.63 0.00 1.63
154 155 1.123077 AAGACTGAGCCGGCATATCA 58.877 50.000 31.54 22.44 0.00 2.15
155 156 1.346062 AGACTGAGCCGGCATATCAT 58.654 50.000 31.54 13.17 0.00 2.45
156 157 1.274728 AGACTGAGCCGGCATATCATC 59.725 52.381 31.54 19.98 0.00 2.92
157 158 1.274728 GACTGAGCCGGCATATCATCT 59.725 52.381 31.54 11.40 0.00 2.90
158 159 1.696336 ACTGAGCCGGCATATCATCTT 59.304 47.619 31.54 3.33 0.00 2.40
159 160 2.074576 CTGAGCCGGCATATCATCTTG 58.925 52.381 31.54 7.95 0.00 3.02
160 161 1.693606 TGAGCCGGCATATCATCTTGA 59.306 47.619 31.54 0.00 0.00 3.02
161 162 2.289257 TGAGCCGGCATATCATCTTGAG 60.289 50.000 31.54 0.00 0.00 3.02
162 163 1.973515 AGCCGGCATATCATCTTGAGA 59.026 47.619 31.54 0.00 0.00 3.27
163 164 2.570752 AGCCGGCATATCATCTTGAGAT 59.429 45.455 31.54 0.00 34.56 2.75
164 165 3.008813 AGCCGGCATATCATCTTGAGATT 59.991 43.478 31.54 0.00 31.21 2.40
165 166 3.755378 GCCGGCATATCATCTTGAGATTT 59.245 43.478 24.80 0.00 31.21 2.17
166 167 4.937620 GCCGGCATATCATCTTGAGATTTA 59.062 41.667 24.80 0.00 31.21 1.40
167 168 5.163814 GCCGGCATATCATCTTGAGATTTAC 60.164 44.000 24.80 0.00 31.21 2.01
168 169 5.062683 CCGGCATATCATCTTGAGATTTACG 59.937 44.000 0.00 0.00 31.21 3.18
169 170 5.863935 CGGCATATCATCTTGAGATTTACGA 59.136 40.000 0.00 0.00 31.21 3.43
170 171 6.366061 CGGCATATCATCTTGAGATTTACGAA 59.634 38.462 0.00 0.00 31.21 3.85
171 172 7.411264 CGGCATATCATCTTGAGATTTACGAAG 60.411 40.741 0.00 0.00 31.21 3.79
172 173 7.386299 GGCATATCATCTTGAGATTTACGAAGT 59.614 37.037 0.00 0.00 37.29 3.01
173 174 8.431593 GCATATCATCTTGAGATTTACGAAGTC 58.568 37.037 0.00 0.00 35.39 3.01
174 175 9.468532 CATATCATCTTGAGATTTACGAAGTCA 57.531 33.333 0.00 0.00 35.39 3.41
176 177 7.993821 TCATCTTGAGATTTACGAAGTCATC 57.006 36.000 0.00 0.00 35.39 2.92
177 178 6.693113 TCATCTTGAGATTTACGAAGTCATCG 59.307 38.462 0.00 0.00 44.39 3.84
184 185 3.601981 CGAAGTCATCGTAGGCGC 58.398 61.111 0.00 0.00 46.52 6.53
185 186 1.944676 CGAAGTCATCGTAGGCGCC 60.945 63.158 21.89 21.89 46.52 6.53
186 187 1.437986 GAAGTCATCGTAGGCGCCT 59.562 57.895 34.85 34.85 38.14 5.52
187 188 0.595310 GAAGTCATCGTAGGCGCCTC 60.595 60.000 36.73 23.04 38.14 4.70
188 189 2.337749 AAGTCATCGTAGGCGCCTCG 62.338 60.000 36.73 32.58 38.14 4.63
189 190 2.827190 TCATCGTAGGCGCCTCGT 60.827 61.111 36.73 21.23 38.14 4.18
190 191 2.353607 CATCGTAGGCGCCTCGTC 60.354 66.667 36.73 22.80 38.14 4.20
191 192 3.950254 ATCGTAGGCGCCTCGTCG 61.950 66.667 36.73 32.16 36.23 5.12
193 194 4.883300 CGTAGGCGCCTCGTCGTC 62.883 72.222 36.73 15.88 36.23 4.20
194 195 4.883300 GTAGGCGCCTCGTCGTCG 62.883 72.222 36.73 0.00 39.34 5.12
213 214 3.998156 CGAGAACGTCTCCTCCCA 58.002 61.111 8.73 0.00 40.34 4.37
214 215 1.507174 CGAGAACGTCTCCTCCCAC 59.493 63.158 8.73 0.00 40.34 4.61
215 216 0.961358 CGAGAACGTCTCCTCCCACT 60.961 60.000 8.73 0.00 40.34 4.00
216 217 0.528470 GAGAACGTCTCCTCCCACTG 59.472 60.000 0.00 0.00 37.55 3.66
217 218 0.112606 AGAACGTCTCCTCCCACTGA 59.887 55.000 0.00 0.00 0.00 3.41
218 219 0.966920 GAACGTCTCCTCCCACTGAA 59.033 55.000 0.00 0.00 0.00 3.02
219 220 1.343465 GAACGTCTCCTCCCACTGAAA 59.657 52.381 0.00 0.00 0.00 2.69
220 221 0.969894 ACGTCTCCTCCCACTGAAAG 59.030 55.000 0.00 0.00 42.29 2.62
221 222 0.390472 CGTCTCCTCCCACTGAAAGC 60.390 60.000 0.00 0.00 37.60 3.51
222 223 0.390472 GTCTCCTCCCACTGAAAGCG 60.390 60.000 0.00 0.00 37.60 4.68
223 224 0.832135 TCTCCTCCCACTGAAAGCGT 60.832 55.000 0.00 0.00 37.60 5.07
224 225 0.895530 CTCCTCCCACTGAAAGCGTA 59.104 55.000 0.00 0.00 37.60 4.42
225 226 1.482593 CTCCTCCCACTGAAAGCGTAT 59.517 52.381 0.00 0.00 37.60 3.06
226 227 1.480954 TCCTCCCACTGAAAGCGTATC 59.519 52.381 0.00 0.00 37.60 2.24
227 228 1.560923 CTCCCACTGAAAGCGTATCG 58.439 55.000 0.00 0.00 37.60 2.92
242 243 4.349663 CGTATCGCCAAAAATCCTGAAA 57.650 40.909 0.00 0.00 0.00 2.69
243 244 4.920376 CGTATCGCCAAAAATCCTGAAAT 58.080 39.130 0.00 0.00 0.00 2.17
244 245 6.055231 CGTATCGCCAAAAATCCTGAAATA 57.945 37.500 0.00 0.00 0.00 1.40
245 246 6.491394 CGTATCGCCAAAAATCCTGAAATAA 58.509 36.000 0.00 0.00 0.00 1.40
246 247 6.970043 CGTATCGCCAAAAATCCTGAAATAAA 59.030 34.615 0.00 0.00 0.00 1.40
247 248 7.647715 CGTATCGCCAAAAATCCTGAAATAAAT 59.352 33.333 0.00 0.00 0.00 1.40
248 249 8.968242 GTATCGCCAAAAATCCTGAAATAAATC 58.032 33.333 0.00 0.00 0.00 2.17
249 250 6.337356 TCGCCAAAAATCCTGAAATAAATCC 58.663 36.000 0.00 0.00 0.00 3.01
250 251 6.071108 TCGCCAAAAATCCTGAAATAAATCCA 60.071 34.615 0.00 0.00 0.00 3.41
251 252 6.593382 CGCCAAAAATCCTGAAATAAATCCAA 59.407 34.615 0.00 0.00 0.00 3.53
252 253 7.118971 CGCCAAAAATCCTGAAATAAATCCAAA 59.881 33.333 0.00 0.00 0.00 3.28
253 254 8.791675 GCCAAAAATCCTGAAATAAATCCAAAA 58.208 29.630 0.00 0.00 0.00 2.44
261 262 9.311916 TCCTGAAATAAATCCAAAAATAATGCG 57.688 29.630 0.00 0.00 0.00 4.73
262 263 9.311916 CCTGAAATAAATCCAAAAATAATGCGA 57.688 29.630 0.00 0.00 0.00 5.10
264 265 8.816144 TGAAATAAATCCAAAAATAATGCGAGC 58.184 29.630 0.00 0.00 0.00 5.03
265 266 8.715191 AAATAAATCCAAAAATAATGCGAGCA 57.285 26.923 0.00 0.00 0.00 4.26
266 267 7.698836 ATAAATCCAAAAATAATGCGAGCAC 57.301 32.000 0.00 0.00 0.00 4.40
267 268 3.502191 TCCAAAAATAATGCGAGCACC 57.498 42.857 0.00 0.00 0.00 5.01
268 269 2.822561 TCCAAAAATAATGCGAGCACCA 59.177 40.909 0.00 0.00 0.00 4.17
269 270 3.119531 TCCAAAAATAATGCGAGCACCAG 60.120 43.478 0.00 0.00 0.00 4.00
270 271 3.181397 CAAAAATAATGCGAGCACCAGG 58.819 45.455 0.00 0.00 0.00 4.45
271 272 2.418368 AAATAATGCGAGCACCAGGA 57.582 45.000 0.00 0.00 0.00 3.86
272 273 2.645838 AATAATGCGAGCACCAGGAT 57.354 45.000 0.00 0.00 0.00 3.24
273 274 2.645838 ATAATGCGAGCACCAGGATT 57.354 45.000 0.00 0.00 33.17 3.01
274 275 2.418368 TAATGCGAGCACCAGGATTT 57.582 45.000 0.00 0.00 31.11 2.17
275 276 2.418368 AATGCGAGCACCAGGATTTA 57.582 45.000 0.00 0.00 0.00 1.40
276 277 2.418368 ATGCGAGCACCAGGATTTAA 57.582 45.000 0.00 0.00 0.00 1.52
277 278 2.192664 TGCGAGCACCAGGATTTAAA 57.807 45.000 0.00 0.00 0.00 1.52
278 279 1.810151 TGCGAGCACCAGGATTTAAAC 59.190 47.619 0.00 0.00 0.00 2.01
279 280 1.132453 GCGAGCACCAGGATTTAAACC 59.868 52.381 0.00 0.00 0.00 3.27
280 281 1.743394 CGAGCACCAGGATTTAAACCC 59.257 52.381 0.00 0.00 0.00 4.11
281 282 2.618045 CGAGCACCAGGATTTAAACCCT 60.618 50.000 0.00 0.00 0.00 4.34
298 299 2.887151 CCTGATGGGTTGGGGATATC 57.113 55.000 0.00 0.00 0.00 1.63
299 300 2.065007 CCTGATGGGTTGGGGATATCA 58.935 52.381 4.83 0.00 0.00 2.15
300 301 2.224867 CCTGATGGGTTGGGGATATCAC 60.225 54.545 4.83 0.00 0.00 3.06
301 302 2.713167 CTGATGGGTTGGGGATATCACT 59.287 50.000 4.65 0.00 0.00 3.41
302 303 2.442878 TGATGGGTTGGGGATATCACTG 59.557 50.000 4.65 0.00 0.00 3.66
303 304 1.979809 TGGGTTGGGGATATCACTGT 58.020 50.000 4.65 0.00 0.00 3.55
304 305 1.843851 TGGGTTGGGGATATCACTGTC 59.156 52.381 4.65 0.00 0.00 3.51
305 306 1.143073 GGGTTGGGGATATCACTGTCC 59.857 57.143 4.65 4.82 32.06 4.02
306 307 1.843851 GGTTGGGGATATCACTGTCCA 59.156 52.381 4.65 1.40 34.44 4.02
307 308 2.421529 GGTTGGGGATATCACTGTCCAC 60.422 54.545 4.65 0.00 36.63 4.02
308 309 1.507140 TGGGGATATCACTGTCCACC 58.493 55.000 4.65 0.00 35.25 4.61
309 310 1.009552 TGGGGATATCACTGTCCACCT 59.990 52.381 4.65 0.00 35.25 4.00
310 311 2.248950 TGGGGATATCACTGTCCACCTA 59.751 50.000 4.65 0.00 35.25 3.08
311 312 3.311028 TGGGGATATCACTGTCCACCTAA 60.311 47.826 4.65 0.00 35.25 2.69
312 313 3.910627 GGGGATATCACTGTCCACCTAAT 59.089 47.826 4.65 0.00 34.44 1.73
313 314 4.020128 GGGGATATCACTGTCCACCTAATC 60.020 50.000 4.65 0.00 34.44 1.75
314 315 4.593206 GGGATATCACTGTCCACCTAATCA 59.407 45.833 4.83 0.00 34.44 2.57
315 316 5.071788 GGGATATCACTGTCCACCTAATCAA 59.928 44.000 4.83 0.00 34.44 2.57
316 317 5.992217 GGATATCACTGTCCACCTAATCAAC 59.008 44.000 4.83 0.00 33.05 3.18
317 318 6.183361 GGATATCACTGTCCACCTAATCAACT 60.183 42.308 4.83 0.00 33.05 3.16
318 319 4.537135 TCACTGTCCACCTAATCAACTC 57.463 45.455 0.00 0.00 0.00 3.01
319 320 3.901222 TCACTGTCCACCTAATCAACTCA 59.099 43.478 0.00 0.00 0.00 3.41
320 321 4.346709 TCACTGTCCACCTAATCAACTCAA 59.653 41.667 0.00 0.00 0.00 3.02
321 322 4.452455 CACTGTCCACCTAATCAACTCAAC 59.548 45.833 0.00 0.00 0.00 3.18
322 323 4.003648 CTGTCCACCTAATCAACTCAACC 58.996 47.826 0.00 0.00 0.00 3.77
323 324 3.392947 TGTCCACCTAATCAACTCAACCA 59.607 43.478 0.00 0.00 0.00 3.67
324 325 4.042809 TGTCCACCTAATCAACTCAACCAT 59.957 41.667 0.00 0.00 0.00 3.55
325 326 5.249622 TGTCCACCTAATCAACTCAACCATA 59.750 40.000 0.00 0.00 0.00 2.74
326 327 5.817816 GTCCACCTAATCAACTCAACCATAG 59.182 44.000 0.00 0.00 0.00 2.23
327 328 5.104527 TCCACCTAATCAACTCAACCATAGG 60.105 44.000 0.00 0.00 35.62 2.57
328 329 5.339200 CCACCTAATCAACTCAACCATAGGT 60.339 44.000 0.00 0.00 41.66 3.08
340 341 2.017049 ACCATAGGTTGATTCGCTTGC 58.983 47.619 0.00 0.00 27.29 4.01
341 342 1.003545 CCATAGGTTGATTCGCTTGCG 60.004 52.381 8.87 8.87 0.00 4.85
342 343 0.657840 ATAGGTTGATTCGCTTGCGC 59.342 50.000 10.38 0.00 0.00 6.09
343 344 0.672091 TAGGTTGATTCGCTTGCGCA 60.672 50.000 5.66 5.66 35.30 6.09
344 345 1.797537 GGTTGATTCGCTTGCGCAC 60.798 57.895 11.12 0.00 35.30 5.34
345 346 1.797537 GTTGATTCGCTTGCGCACC 60.798 57.895 11.12 2.75 35.30 5.01
346 347 2.257302 TTGATTCGCTTGCGCACCA 61.257 52.632 11.12 0.00 35.30 4.17
347 348 1.790090 TTGATTCGCTTGCGCACCAA 61.790 50.000 11.12 10.12 35.30 3.67
348 349 1.081509 GATTCGCTTGCGCACCAAA 60.082 52.632 11.12 2.41 35.30 3.28
349 350 0.662970 GATTCGCTTGCGCACCAAAA 60.663 50.000 11.12 2.84 35.30 2.44
350 351 0.249238 ATTCGCTTGCGCACCAAAAA 60.249 45.000 11.12 1.15 35.30 1.94
351 352 0.249238 TTCGCTTGCGCACCAAAAAT 60.249 45.000 11.12 0.00 35.30 1.82
352 353 0.662970 TCGCTTGCGCACCAAAAATC 60.663 50.000 11.12 0.00 35.30 2.17
353 354 0.664166 CGCTTGCGCACCAAAAATCT 60.664 50.000 11.12 0.00 35.30 2.40
360 361 0.897621 GCACCAAAAATCTGGGGGAG 59.102 55.000 0.00 0.00 40.58 4.30
361 362 1.549950 GCACCAAAAATCTGGGGGAGA 60.550 52.381 0.00 0.00 40.58 3.71
393 394 2.348666 GGAGATGATGTTTTCCACGACG 59.651 50.000 0.00 0.00 0.00 5.12
398 399 1.882682 ATGTTTTCCACGACGACGCG 61.883 55.000 3.53 3.53 43.96 6.01
413 414 2.654912 CGCGTCTGGAAACGTGGAC 61.655 63.158 0.00 0.00 46.48 4.02
427 428 3.434319 GGACGTCGACCCGTGCTA 61.434 66.667 10.58 0.00 44.48 3.49
428 429 2.202401 GACGTCGACCCGTGCTAC 60.202 66.667 10.58 0.00 41.98 3.58
453 456 2.303022 TGAAAACGATGGCTCTCCTCTT 59.697 45.455 0.00 0.00 0.00 2.85
464 467 2.949644 GCTCTCCTCTTCCTCTACTCAC 59.050 54.545 0.00 0.00 0.00 3.51
466 469 2.092861 TCTCCTCTTCCTCTACTCACGG 60.093 54.545 0.00 0.00 0.00 4.94
477 480 0.817654 TACTCACGGCACCAGAGATG 59.182 55.000 11.79 0.00 33.69 2.90
478 481 1.188219 ACTCACGGCACCAGAGATGT 61.188 55.000 11.79 0.00 33.69 3.06
486 489 5.048013 CACGGCACCAGAGATGTATAGATTA 60.048 44.000 0.00 0.00 0.00 1.75
487 490 5.184096 ACGGCACCAGAGATGTATAGATTAG 59.816 44.000 0.00 0.00 0.00 1.73
488 491 5.415221 GGCACCAGAGATGTATAGATTAGC 58.585 45.833 0.00 0.00 0.00 3.09
489 492 5.186797 GGCACCAGAGATGTATAGATTAGCT 59.813 44.000 0.00 0.00 0.00 3.32
490 493 6.329496 GCACCAGAGATGTATAGATTAGCTC 58.671 44.000 0.00 0.00 0.00 4.09
491 494 6.071672 GCACCAGAGATGTATAGATTAGCTCA 60.072 42.308 0.00 0.00 0.00 4.26
492 495 7.363705 GCACCAGAGATGTATAGATTAGCTCAT 60.364 40.741 0.00 0.00 0.00 2.90
493 496 9.183368 CACCAGAGATGTATAGATTAGCTCATA 57.817 37.037 0.00 0.00 0.00 2.15
494 497 9.407380 ACCAGAGATGTATAGATTAGCTCATAG 57.593 37.037 0.00 0.00 0.00 2.23
495 498 8.352201 CCAGAGATGTATAGATTAGCTCATAGC 58.648 40.741 0.00 0.00 42.84 2.97
504 507 3.333969 GCTCATAGCTGGACGCGC 61.334 66.667 5.73 0.00 45.59 6.86
505 508 2.415010 CTCATAGCTGGACGCGCT 59.585 61.111 5.73 0.00 45.59 5.92
506 509 1.227089 CTCATAGCTGGACGCGCTT 60.227 57.895 5.73 0.00 45.59 4.68
507 510 0.030773 CTCATAGCTGGACGCGCTTA 59.969 55.000 5.73 0.00 45.59 3.09
508 511 0.458260 TCATAGCTGGACGCGCTTAA 59.542 50.000 5.73 0.00 45.59 1.85
509 512 1.068588 TCATAGCTGGACGCGCTTAAT 59.931 47.619 5.73 0.00 45.59 1.40
510 513 1.457303 CATAGCTGGACGCGCTTAATC 59.543 52.381 5.73 0.00 45.59 1.75
511 514 0.744874 TAGCTGGACGCGCTTAATCT 59.255 50.000 5.73 0.00 45.59 2.40
512 515 0.744874 AGCTGGACGCGCTTAATCTA 59.255 50.000 5.73 0.00 45.59 1.98
513 516 1.136305 AGCTGGACGCGCTTAATCTAA 59.864 47.619 5.73 0.00 45.59 2.10
514 517 2.135933 GCTGGACGCGCTTAATCTAAT 58.864 47.619 5.73 0.00 0.00 1.73
515 518 2.155924 GCTGGACGCGCTTAATCTAATC 59.844 50.000 5.73 0.00 0.00 1.75
516 519 2.731976 CTGGACGCGCTTAATCTAATCC 59.268 50.000 5.73 1.38 0.00 3.01
517 520 1.719780 GGACGCGCTTAATCTAATCCG 59.280 52.381 5.73 0.00 0.00 4.18
518 521 2.606308 GGACGCGCTTAATCTAATCCGA 60.606 50.000 5.73 0.00 0.00 4.55
519 522 3.243336 GACGCGCTTAATCTAATCCGAT 58.757 45.455 5.73 0.00 0.00 4.18
520 523 3.243336 ACGCGCTTAATCTAATCCGATC 58.757 45.455 5.73 0.00 0.00 3.69
521 524 2.599082 CGCGCTTAATCTAATCCGATCC 59.401 50.000 5.56 0.00 0.00 3.36
522 525 2.599082 GCGCTTAATCTAATCCGATCCG 59.401 50.000 0.00 0.00 0.00 4.18
523 526 2.599082 CGCTTAATCTAATCCGATCCGC 59.401 50.000 0.00 0.00 0.00 5.54
524 527 2.599082 GCTTAATCTAATCCGATCCGCG 59.401 50.000 0.00 0.00 40.47 6.46
542 545 2.446036 GGATACCCGGCAGACCCT 60.446 66.667 0.00 0.00 0.00 4.34
543 546 2.508751 GGATACCCGGCAGACCCTC 61.509 68.421 0.00 0.00 0.00 4.30
544 547 2.446036 ATACCCGGCAGACCCTCC 60.446 66.667 0.00 0.00 0.00 4.30
545 548 3.326385 ATACCCGGCAGACCCTCCA 62.326 63.158 0.00 0.00 0.00 3.86
546 549 3.976490 TACCCGGCAGACCCTCCAG 62.976 68.421 0.00 0.00 0.00 3.86
550 553 3.334054 GGCAGACCCTCCAGGCTT 61.334 66.667 0.00 0.00 40.58 4.35
551 554 2.759795 GCAGACCCTCCAGGCTTT 59.240 61.111 0.00 0.00 40.58 3.51
552 555 1.377856 GCAGACCCTCCAGGCTTTC 60.378 63.158 0.00 0.00 40.58 2.62
553 556 1.301293 CAGACCCTCCAGGCTTTCC 59.699 63.158 0.00 0.00 40.58 3.13
554 557 1.151810 AGACCCTCCAGGCTTTCCA 60.152 57.895 0.00 0.00 40.58 3.53
555 558 1.002011 GACCCTCCAGGCTTTCCAC 60.002 63.158 0.00 0.00 40.58 4.02
556 559 2.045926 CCCTCCAGGCTTTCCACG 60.046 66.667 0.00 0.00 33.74 4.94
557 560 2.750350 CCTCCAGGCTTTCCACGT 59.250 61.111 0.00 0.00 33.74 4.49
558 561 1.376037 CCTCCAGGCTTTCCACGTC 60.376 63.158 0.00 0.00 33.74 4.34
559 562 1.738099 CTCCAGGCTTTCCACGTCG 60.738 63.158 0.00 0.00 33.74 5.12
560 563 2.154798 CTCCAGGCTTTCCACGTCGA 62.155 60.000 0.00 0.00 33.74 4.20
561 564 1.079127 CCAGGCTTTCCACGTCGAT 60.079 57.895 0.00 0.00 33.74 3.59
562 565 0.174845 CCAGGCTTTCCACGTCGATA 59.825 55.000 0.00 0.00 33.74 2.92
563 566 1.404986 CCAGGCTTTCCACGTCGATAA 60.405 52.381 0.00 0.00 33.74 1.75
564 567 2.550978 CAGGCTTTCCACGTCGATAAT 58.449 47.619 0.00 0.00 33.74 1.28
565 568 2.285220 CAGGCTTTCCACGTCGATAATG 59.715 50.000 0.00 0.00 33.74 1.90
566 569 2.167693 AGGCTTTCCACGTCGATAATGA 59.832 45.455 0.00 0.00 33.74 2.57
567 570 2.284417 GGCTTTCCACGTCGATAATGAC 59.716 50.000 0.00 0.00 35.49 3.06
568 571 3.187700 GCTTTCCACGTCGATAATGACT 58.812 45.455 0.00 0.00 36.71 3.41
569 572 3.000322 GCTTTCCACGTCGATAATGACTG 60.000 47.826 0.00 0.00 36.71 3.51
570 573 2.863401 TCCACGTCGATAATGACTGG 57.137 50.000 0.00 0.00 37.95 4.00
571 574 2.371306 TCCACGTCGATAATGACTGGA 58.629 47.619 0.00 9.49 40.57 3.86
572 575 2.956333 TCCACGTCGATAATGACTGGAT 59.044 45.455 0.00 0.00 39.28 3.41
573 576 4.139038 TCCACGTCGATAATGACTGGATA 58.861 43.478 0.00 0.00 39.28 2.59
574 577 4.581409 TCCACGTCGATAATGACTGGATAA 59.419 41.667 0.00 0.00 39.28 1.75
575 578 4.917998 CCACGTCGATAATGACTGGATAAG 59.082 45.833 0.00 0.00 38.42 1.73
576 579 4.917998 CACGTCGATAATGACTGGATAAGG 59.082 45.833 0.00 0.00 36.71 2.69
577 580 4.583489 ACGTCGATAATGACTGGATAAGGT 59.417 41.667 0.00 0.00 36.71 3.50
578 581 5.068723 ACGTCGATAATGACTGGATAAGGTT 59.931 40.000 0.00 0.00 36.71 3.50
579 582 5.983720 CGTCGATAATGACTGGATAAGGTTT 59.016 40.000 0.00 0.00 36.71 3.27
678 853 3.858135 ACCCTCGGATACAACCAGATAT 58.142 45.455 0.00 0.00 0.00 1.63
679 854 3.833070 ACCCTCGGATACAACCAGATATC 59.167 47.826 0.00 0.00 0.00 1.63
680 855 4.090090 CCCTCGGATACAACCAGATATCT 58.910 47.826 0.00 0.00 0.00 1.98
681 856 5.222275 ACCCTCGGATACAACCAGATATCTA 60.222 44.000 4.54 0.00 0.00 1.98
700 877 8.788325 ATATCTAAGATAATAAACGGCCAACC 57.212 34.615 2.24 0.00 0.00 3.77
712 889 1.270252 CGGCCAACCTTTTTGCATTCT 60.270 47.619 2.24 0.00 0.00 2.40
713 891 2.806382 CGGCCAACCTTTTTGCATTCTT 60.806 45.455 2.24 0.00 0.00 2.52
737 915 9.533253 CTTTGCGATTTTTCCTGGATTTTATAT 57.467 29.630 0.00 0.00 0.00 0.86
739 917 6.922957 TGCGATTTTTCCTGGATTTTATATGC 59.077 34.615 0.00 0.00 0.00 3.14
763 941 7.493320 TGCTTTATTATTTACACTCCACGTAGG 59.507 37.037 0.00 0.00 39.47 3.18
782 964 1.737793 GGAAAACGAATGCCGAGACAT 59.262 47.619 0.00 0.00 41.76 3.06
802 984 2.779951 GAAAACCATTGGCGGCCACC 62.780 60.000 23.78 1.63 30.78 4.61
975 1161 2.815647 GCGCACGGAAAGAGAGGG 60.816 66.667 0.30 0.00 0.00 4.30
977 1163 2.269241 GCACGGAAAGAGAGGGGG 59.731 66.667 0.00 0.00 0.00 5.40
991 1177 2.107141 GGGGGAGAGATTCGCACG 59.893 66.667 0.00 0.00 40.35 5.34
992 1178 2.722201 GGGGGAGAGATTCGCACGT 61.722 63.158 0.00 0.00 40.35 4.49
1179 1399 3.228017 GCCCTCGCCTACTCCTCC 61.228 72.222 0.00 0.00 0.00 4.30
1210 1430 2.363361 CCCTCGTCCCCAGGTACT 59.637 66.667 0.00 0.00 43.88 2.73
1241 1471 1.599542 CCGCTAGCCTTGCTCAATAAC 59.400 52.381 9.66 0.00 40.44 1.89
1247 1477 3.610911 AGCCTTGCTCAATAACACTACC 58.389 45.455 0.00 0.00 30.62 3.18
1401 1668 1.939255 GCCAGAGATGTAGCTTTCAGC 59.061 52.381 0.00 0.00 42.84 4.26
1446 1716 3.548415 CCGGCGATTTCTAGTCTGTAGTC 60.548 52.174 9.30 0.00 0.00 2.59
1527 1798 1.062587 GTGACAGCACCATTATGACGC 59.937 52.381 0.00 0.00 39.14 5.19
1531 1802 1.930503 CAGCACCATTATGACGCGTTA 59.069 47.619 15.53 10.65 0.00 3.18
1536 1807 4.514506 CACCATTATGACGCGTTATTGAC 58.485 43.478 22.12 3.93 0.00 3.18
1537 1808 4.270084 CACCATTATGACGCGTTATTGACT 59.730 41.667 22.12 0.09 0.00 3.41
1538 1809 4.873827 ACCATTATGACGCGTTATTGACTT 59.126 37.500 22.12 4.50 0.00 3.01
1539 1810 5.006358 ACCATTATGACGCGTTATTGACTTC 59.994 40.000 22.12 1.51 0.00 3.01
1540 1811 5.234329 CCATTATGACGCGTTATTGACTTCT 59.766 40.000 22.12 0.00 0.00 2.85
1541 1812 5.696260 TTATGACGCGTTATTGACTTCTG 57.304 39.130 22.12 0.00 0.00 3.02
1602 1873 4.698304 CCAAATTAGGAACGGCTTAACTGA 59.302 41.667 0.00 0.00 0.00 3.41
1603 1874 5.163754 CCAAATTAGGAACGGCTTAACTGAG 60.164 44.000 0.00 0.00 0.00 3.35
1604 1875 4.820894 ATTAGGAACGGCTTAACTGAGT 57.179 40.909 0.00 0.00 0.00 3.41
1618 1889 1.275573 ACTGAGTTAGTTTCCTCCGGC 59.724 52.381 0.00 0.00 35.67 6.13
1619 1890 1.550976 CTGAGTTAGTTTCCTCCGGCT 59.449 52.381 0.00 0.00 0.00 5.52
1620 1891 1.275291 TGAGTTAGTTTCCTCCGGCTG 59.725 52.381 0.00 0.00 0.00 4.85
1621 1892 0.036294 AGTTAGTTTCCTCCGGCTGC 60.036 55.000 0.00 0.00 0.00 5.25
1622 1893 0.036294 GTTAGTTTCCTCCGGCTGCT 60.036 55.000 0.00 0.00 0.00 4.24
1623 1894 0.036388 TTAGTTTCCTCCGGCTGCTG 60.036 55.000 0.00 0.26 0.00 4.41
1624 1895 0.902984 TAGTTTCCTCCGGCTGCTGA 60.903 55.000 10.70 0.97 0.00 4.26
1625 1896 1.743252 GTTTCCTCCGGCTGCTGAG 60.743 63.158 10.70 11.01 0.00 3.35
1626 1897 3.612247 TTTCCTCCGGCTGCTGAGC 62.612 63.158 10.70 0.00 45.40 4.26
1643 1914 7.628769 TGCTGAGCAGTTATTTATTTGATCA 57.371 32.000 1.40 0.00 35.06 2.92
1666 1937 5.755409 TTTGAGTAGGCTTGTAGATTGGA 57.245 39.130 0.00 0.00 0.00 3.53
1673 1944 4.362677 AGGCTTGTAGATTGGAGAACCTA 58.637 43.478 0.00 0.00 37.04 3.08
1678 1949 6.481644 GCTTGTAGATTGGAGAACCTATTCTG 59.518 42.308 0.00 0.00 45.60 3.02
1710 1985 1.541588 GTGGCACCCAGAGAAACAATC 59.458 52.381 6.29 0.00 32.34 2.67
1718 1993 3.619038 CCCAGAGAAACAATCTAGCGAAC 59.381 47.826 0.00 0.00 38.96 3.95
1741 2082 0.541863 TAGCTCTAGCCCAAGGTTGC 59.458 55.000 0.00 0.00 43.38 4.17
1742 2083 1.002134 GCTCTAGCCCAAGGTTGCA 60.002 57.895 0.00 0.00 34.31 4.08
1744 2085 1.457346 CTCTAGCCCAAGGTTGCAAG 58.543 55.000 0.00 0.00 0.00 4.01
1747 2088 2.084546 CTAGCCCAAGGTTGCAAGTAC 58.915 52.381 0.00 0.00 0.00 2.73
1759 2100 6.296026 AGGTTGCAAGTACTTCTGAATGTTA 58.704 36.000 4.77 0.00 0.00 2.41
1764 2105 5.258622 CAAGTACTTCTGAATGTTATGCGC 58.741 41.667 4.77 0.00 0.00 6.09
1775 2116 5.621197 AATGTTATGCGCTTAAACAGTCA 57.379 34.783 21.18 14.03 36.62 3.41
1788 2129 6.560253 TTAAACAGTCAAAGATCCAGCTTC 57.440 37.500 0.00 0.00 0.00 3.86
1794 2135 3.129988 GTCAAAGATCCAGCTTCCCATTG 59.870 47.826 0.00 0.00 0.00 2.82
1801 2142 1.305623 AGCTTCCCATTGGAGCTGG 59.694 57.895 16.02 0.00 43.07 4.85
1831 2213 1.239347 GCTGTTCTTCTGGGTCCAAC 58.761 55.000 0.00 0.00 0.00 3.77
1833 2215 0.107831 TGTTCTTCTGGGTCCAACCG 59.892 55.000 0.00 0.00 39.83 4.44
1840 2222 1.700739 TCTGGGTCCAACCGTGTTATT 59.299 47.619 0.00 0.00 39.83 1.40
1858 2240 5.861251 TGTTATTCAACACCGATGATTTTGC 59.139 36.000 0.00 0.00 39.75 3.68
1882 2265 3.438087 CCAGCGTGAAGAGATTCAACAAT 59.562 43.478 0.00 0.00 32.04 2.71
1886 2269 5.471456 AGCGTGAAGAGATTCAACAATTCTT 59.529 36.000 0.00 0.00 32.04 2.52
1899 2282 5.827267 TCAACAATTCTTGTGATGTGAGGAA 59.173 36.000 0.00 0.00 44.59 3.36
1971 2360 4.523083 TCCTACACTATGTTTTGCATCCC 58.477 43.478 0.00 0.00 38.94 3.85
1977 2366 4.012374 ACTATGTTTTGCATCCCTGTCTG 58.988 43.478 0.00 0.00 38.94 3.51
1978 2367 1.619654 TGTTTTGCATCCCTGTCTGG 58.380 50.000 0.00 0.00 0.00 3.86
1979 2368 0.244721 GTTTTGCATCCCTGTCTGGC 59.755 55.000 0.00 0.00 0.00 4.85
1993 2383 1.999735 GTCTGGCGATTCGTCATGAAA 59.000 47.619 14.48 0.00 41.69 2.69
1995 2385 3.063997 GTCTGGCGATTCGTCATGAAAAT 59.936 43.478 14.48 0.05 41.69 1.82
2042 2434 2.305635 ACTGCACATGTCCATCTTACCA 59.694 45.455 0.00 0.00 0.00 3.25
2043 2435 3.054139 ACTGCACATGTCCATCTTACCAT 60.054 43.478 0.00 0.00 0.00 3.55
2044 2436 3.949754 CTGCACATGTCCATCTTACCATT 59.050 43.478 0.00 0.00 0.00 3.16
2045 2437 3.695556 TGCACATGTCCATCTTACCATTG 59.304 43.478 0.00 0.00 0.00 2.82
2046 2438 3.696051 GCACATGTCCATCTTACCATTGT 59.304 43.478 0.00 0.00 0.00 2.71
2047 2439 4.201950 GCACATGTCCATCTTACCATTGTC 60.202 45.833 0.00 0.00 0.00 3.18
2048 2440 4.336433 CACATGTCCATCTTACCATTGTCC 59.664 45.833 0.00 0.00 0.00 4.02
2049 2441 4.018506 ACATGTCCATCTTACCATTGTCCA 60.019 41.667 0.00 0.00 0.00 4.02
2050 2442 3.950397 TGTCCATCTTACCATTGTCCAC 58.050 45.455 0.00 0.00 0.00 4.02
2051 2443 3.329225 TGTCCATCTTACCATTGTCCACA 59.671 43.478 0.00 0.00 0.00 4.17
2052 2444 3.941483 GTCCATCTTACCATTGTCCACAG 59.059 47.826 0.00 0.00 0.00 3.66
2053 2445 3.587061 TCCATCTTACCATTGTCCACAGT 59.413 43.478 0.00 0.00 0.00 3.55
2054 2446 4.042809 TCCATCTTACCATTGTCCACAGTT 59.957 41.667 0.00 0.00 0.00 3.16
2055 2447 4.156556 CCATCTTACCATTGTCCACAGTTG 59.843 45.833 0.00 0.00 0.00 3.16
2056 2448 3.750371 TCTTACCATTGTCCACAGTTGG 58.250 45.455 8.50 8.50 45.56 3.77
2103 2499 4.685169 ATCAACTGTTATTTGTCAGCCG 57.315 40.909 0.00 0.00 35.37 5.52
2186 2582 0.947180 AACGAACGCGCATACCACTT 60.947 50.000 5.73 0.00 42.48 3.16
2195 2591 0.253044 GCATACCACTTGGGAGCTGA 59.747 55.000 0.00 0.00 41.15 4.26
2196 2592 1.745141 GCATACCACTTGGGAGCTGAG 60.745 57.143 0.00 0.00 41.15 3.35
2199 2595 2.600729 CCACTTGGGAGCTGAGCCT 61.601 63.158 0.00 0.00 40.01 4.58
2205 2601 1.583556 TGGGAGCTGAGCCTCATTAA 58.416 50.000 0.00 0.00 33.47 1.40
2207 2603 2.293170 GGGAGCTGAGCCTCATTAAAC 58.707 52.381 0.00 0.00 33.47 2.01
2208 2604 2.092699 GGGAGCTGAGCCTCATTAAACT 60.093 50.000 0.00 0.00 33.47 2.66
2209 2605 3.134804 GGGAGCTGAGCCTCATTAAACTA 59.865 47.826 0.00 0.00 33.47 2.24
2210 2606 4.384208 GGGAGCTGAGCCTCATTAAACTAA 60.384 45.833 0.00 0.00 33.47 2.24
2211 2607 4.572795 GGAGCTGAGCCTCATTAAACTAAC 59.427 45.833 0.00 0.00 33.47 2.34
2212 2608 4.184629 AGCTGAGCCTCATTAAACTAACG 58.815 43.478 0.00 0.00 0.00 3.18
2213 2609 4.081642 AGCTGAGCCTCATTAAACTAACGA 60.082 41.667 0.00 0.00 0.00 3.85
2214 2610 4.268884 GCTGAGCCTCATTAAACTAACGAG 59.731 45.833 0.00 0.00 0.00 4.18
2216 2612 4.081642 TGAGCCTCATTAAACTAACGAGCT 60.082 41.667 0.00 0.00 27.31 4.09
2217 2613 4.184629 AGCCTCATTAAACTAACGAGCTG 58.815 43.478 0.00 0.00 27.31 4.24
2219 2615 4.268884 GCCTCATTAAACTAACGAGCTGAG 59.731 45.833 0.00 0.00 27.31 3.35
2220 2616 4.268884 CCTCATTAAACTAACGAGCTGAGC 59.731 45.833 0.00 0.00 27.31 4.26
2221 2617 4.181578 TCATTAAACTAACGAGCTGAGCC 58.818 43.478 0.00 0.00 0.00 4.70
2222 2618 3.955650 TTAAACTAACGAGCTGAGCCT 57.044 42.857 0.00 0.00 0.00 4.58
2223 2619 2.371910 AAACTAACGAGCTGAGCCTC 57.628 50.000 0.00 0.00 0.00 4.70
2225 2621 1.479709 ACTAACGAGCTGAGCCTCAT 58.520 50.000 0.00 0.00 0.00 2.90
2226 2622 1.827969 ACTAACGAGCTGAGCCTCATT 59.172 47.619 0.00 0.00 0.00 2.57
2230 2636 2.622436 ACGAGCTGAGCCTCATTAAAC 58.378 47.619 0.00 0.00 0.00 2.01
2231 2637 2.234908 ACGAGCTGAGCCTCATTAAACT 59.765 45.455 0.00 0.00 0.00 2.66
2264 2670 8.788409 AAGTGAAGATCAATTTTTCTTTCGAC 57.212 30.769 0.00 1.38 29.57 4.20
2285 2691 5.237779 CGACAGGGAAGCAACTTTTACTTAA 59.762 40.000 0.00 0.00 0.00 1.85
2286 2692 6.387041 ACAGGGAAGCAACTTTTACTTAAC 57.613 37.500 0.00 0.00 0.00 2.01
2326 2759 6.649557 ACAACATACTTGTCAAACCTACTAGC 59.350 38.462 0.00 0.00 34.06 3.42
2344 2777 3.271250 CAGTATTGGGCTGCCAAGT 57.729 52.632 22.05 8.92 32.97 3.16
2345 2778 1.549203 CAGTATTGGGCTGCCAAGTT 58.451 50.000 22.05 3.32 32.97 2.66
2363 2796 9.770097 TGCCAAGTTTTGAATAACATAATGAAA 57.230 25.926 0.00 0.00 0.00 2.69
2378 2811 7.765307 ACATAATGAAACATTGATGTGACTCC 58.235 34.615 7.16 0.00 41.61 3.85
2398 2831 3.003897 TCCAGTAACATCGTTTTGTTGCC 59.996 43.478 10.09 3.30 41.43 4.52
2403 2836 3.518634 ACATCGTTTTGTTGCCTTTGT 57.481 38.095 0.00 0.00 0.00 2.83
2410 2843 6.157211 TCGTTTTGTTGCCTTTGTAGAAAAA 58.843 32.000 0.00 0.00 0.00 1.94
2442 2877 5.565509 TGATGGTGTCTTTTTAGGCATGTA 58.434 37.500 0.00 0.00 0.00 2.29
2443 2878 6.186957 TGATGGTGTCTTTTTAGGCATGTAT 58.813 36.000 0.00 0.00 0.00 2.29
2444 2879 7.342581 TGATGGTGTCTTTTTAGGCATGTATA 58.657 34.615 0.00 0.00 0.00 1.47
2447 2882 6.597672 TGGTGTCTTTTTAGGCATGTATAGTG 59.402 38.462 0.00 0.00 0.00 2.74
2469 2904 6.714810 AGTGATTCCAACAAATAGCAGTAACA 59.285 34.615 0.00 0.00 0.00 2.41
2474 2909 6.007076 TCCAACAAATAGCAGTAACATGGAA 58.993 36.000 0.00 0.00 30.77 3.53
2478 2913 8.863049 CAACAAATAGCAGTAACATGGAATTTC 58.137 33.333 0.00 0.00 0.00 2.17
2486 2922 8.515414 AGCAGTAACATGGAATTTCTTTTCTAC 58.485 33.333 0.00 0.00 0.00 2.59
2488 2924 9.014297 CAGTAACATGGAATTTCTTTTCTACCT 57.986 33.333 0.00 0.00 0.00 3.08
2489 2925 9.588096 AGTAACATGGAATTTCTTTTCTACCTT 57.412 29.630 0.00 0.00 0.00 3.50
2509 2945 9.703892 CTACCTTATTAGTGATCCTGAGAATTG 57.296 37.037 0.00 0.00 0.00 2.32
2512 2948 8.834465 CCTTATTAGTGATCCTGAGAATTGTTG 58.166 37.037 0.00 0.00 0.00 3.33
2523 2959 7.326454 TCCTGAGAATTGTTGTTCTATCTGAG 58.674 38.462 0.00 0.00 38.51 3.35
2533 2969 9.817809 TTGTTGTTCTATCTGAGTATATTGACC 57.182 33.333 0.00 0.00 0.00 4.02
2534 2970 9.201989 TGTTGTTCTATCTGAGTATATTGACCT 57.798 33.333 0.00 0.00 0.00 3.85
2535 2971 9.469807 GTTGTTCTATCTGAGTATATTGACCTG 57.530 37.037 0.00 0.00 0.00 4.00
2536 2972 8.996651 TGTTCTATCTGAGTATATTGACCTGA 57.003 34.615 0.00 0.00 0.00 3.86
2537 2973 8.851145 TGTTCTATCTGAGTATATTGACCTGAC 58.149 37.037 0.00 0.00 0.00 3.51
2541 2984 6.951062 TCTGAGTATATTGACCTGACTCTG 57.049 41.667 0.00 0.00 37.89 3.35
2557 3001 6.238731 CCTGACTCTGTATTTTTGTCTTTGCA 60.239 38.462 0.00 0.00 0.00 4.08
2560 3004 7.100458 ACTCTGTATTTTTGTCTTTGCACTT 57.900 32.000 0.00 0.00 0.00 3.16
2575 3019 3.609853 TGCACTTGTATCCAGGATGTTC 58.390 45.455 12.80 3.46 0.00 3.18
2584 3028 2.531771 TCCAGGATGTTCGGTTCTGTA 58.468 47.619 0.00 0.00 0.00 2.74
2773 3217 2.010497 GGAAGGTTCGCTTTCATCCTC 58.990 52.381 0.00 0.00 35.22 3.71
2779 3223 3.491104 GGTTCGCTTTCATCCTCTACGAT 60.491 47.826 0.00 0.00 0.00 3.73
2854 3298 9.990360 TTCTGAAAGGATGTAAATTTTTAACCC 57.010 29.630 0.00 0.00 0.00 4.11
2878 3322 7.334921 CCCGTAGTTGAATATGGTTTTGAGTTA 59.665 37.037 0.00 0.00 30.90 2.24
2967 3411 2.289072 CCACCTTGTGTTCTCTGACGAT 60.289 50.000 0.00 0.00 0.00 3.73
3056 3500 1.525995 CGTTGCCACAGTTCACCCT 60.526 57.895 0.00 0.00 0.00 4.34
3094 3538 1.160137 CCCTATAATTCAGCTGCGGC 58.840 55.000 10.33 10.33 39.06 6.53
3622 4068 3.084070 GCTTGCAGCTAGTGTTTTTGT 57.916 42.857 5.72 0.00 38.45 2.83
3623 4069 3.447742 GCTTGCAGCTAGTGTTTTTGTT 58.552 40.909 5.72 0.00 38.45 2.83
3624 4070 3.865164 GCTTGCAGCTAGTGTTTTTGTTT 59.135 39.130 5.72 0.00 38.45 2.83
3625 4071 4.329801 GCTTGCAGCTAGTGTTTTTGTTTT 59.670 37.500 5.72 0.00 38.45 2.43
3626 4072 5.518487 GCTTGCAGCTAGTGTTTTTGTTTTA 59.482 36.000 5.72 0.00 38.45 1.52
3627 4073 6.291796 GCTTGCAGCTAGTGTTTTTGTTTTAG 60.292 38.462 5.72 0.00 38.45 1.85
3628 4074 5.587289 TGCAGCTAGTGTTTTTGTTTTAGG 58.413 37.500 0.00 0.00 0.00 2.69
3629 4075 4.444388 GCAGCTAGTGTTTTTGTTTTAGGC 59.556 41.667 0.00 0.00 0.00 3.93
3630 4076 5.587289 CAGCTAGTGTTTTTGTTTTAGGCA 58.413 37.500 0.00 0.00 0.00 4.75
3631 4077 5.687285 CAGCTAGTGTTTTTGTTTTAGGCAG 59.313 40.000 0.00 0.00 0.00 4.85
3632 4078 5.359860 AGCTAGTGTTTTTGTTTTAGGCAGT 59.640 36.000 0.00 0.00 0.00 4.40
3633 4079 6.040247 GCTAGTGTTTTTGTTTTAGGCAGTT 58.960 36.000 0.00 0.00 0.00 3.16
3634 4080 6.533723 GCTAGTGTTTTTGTTTTAGGCAGTTT 59.466 34.615 0.00 0.00 0.00 2.66
3635 4081 7.064134 GCTAGTGTTTTTGTTTTAGGCAGTTTT 59.936 33.333 0.00 0.00 0.00 2.43
3636 4082 7.737972 AGTGTTTTTGTTTTAGGCAGTTTTT 57.262 28.000 0.00 0.00 0.00 1.94
3637 4083 7.802738 AGTGTTTTTGTTTTAGGCAGTTTTTC 58.197 30.769 0.00 0.00 0.00 2.29
3638 4084 7.442666 AGTGTTTTTGTTTTAGGCAGTTTTTCA 59.557 29.630 0.00 0.00 0.00 2.69
3639 4085 8.233868 GTGTTTTTGTTTTAGGCAGTTTTTCAT 58.766 29.630 0.00 0.00 0.00 2.57
3640 4086 8.233190 TGTTTTTGTTTTAGGCAGTTTTTCATG 58.767 29.630 0.00 0.00 0.00 3.07
3641 4087 7.913674 TTTTGTTTTAGGCAGTTTTTCATGT 57.086 28.000 0.00 0.00 0.00 3.21
3642 4088 9.436957 TTTTTGTTTTAGGCAGTTTTTCATGTA 57.563 25.926 0.00 0.00 0.00 2.29
3643 4089 7.995463 TTGTTTTAGGCAGTTTTTCATGTAC 57.005 32.000 0.00 0.00 0.00 2.90
3648 4094 7.575414 TTAGGCAGTTTTTCATGTACTTTGA 57.425 32.000 0.00 0.00 0.00 2.69
3757 4205 3.282831 GTGTATTTCACAGGCCACAAC 57.717 47.619 5.01 0.00 45.51 3.32
3768 4216 1.512156 GGCCACAACGTGATTTCCGT 61.512 55.000 0.00 0.00 40.92 4.69
3789 4237 4.240096 GTCTGGAAAAAGAACGACGGATA 58.760 43.478 0.00 0.00 0.00 2.59
3854 4312 4.956075 AGGGTGTAAATGATTTCCATCCAC 59.044 41.667 14.15 6.00 33.53 4.02
3879 4337 7.658575 ACTTTGTTTCATGATCAAATTGGAAGG 59.341 33.333 19.58 12.38 32.04 3.46
3899 4357 8.717717 TGGAAGGAACAGACATATTATCATTCT 58.282 33.333 0.00 0.00 30.76 2.40
3907 4365 9.113838 ACAGACATATTATCATTCTGAAACCAC 57.886 33.333 3.99 0.00 37.67 4.16
3922 4380 2.799126 ACCACTGTGACAAAACCTGA 57.201 45.000 9.86 0.00 0.00 3.86
3929 4387 2.104792 TGTGACAAAACCTGAGAGGAGG 59.895 50.000 0.00 0.00 37.67 4.30
3966 4424 4.982241 AGAATCTCTTTTGGACTCCACA 57.018 40.909 0.00 0.00 30.78 4.17
3978 4436 4.393834 TGGACTCCACAATGAAAAATCGA 58.606 39.130 0.00 0.00 0.00 3.59
3979 4437 5.009631 TGGACTCCACAATGAAAAATCGAT 58.990 37.500 0.00 0.00 0.00 3.59
4004 4462 4.096382 GCCTTCACGATTACATGGAAATGT 59.904 41.667 0.00 0.00 38.49 2.71
4028 4486 2.035193 CGTAGCAGCATCCACATAGACT 59.965 50.000 0.00 0.00 0.00 3.24
4029 4487 3.253432 CGTAGCAGCATCCACATAGACTA 59.747 47.826 0.00 0.00 0.00 2.59
4031 4489 3.570540 AGCAGCATCCACATAGACTAGA 58.429 45.455 0.00 0.00 0.00 2.43
4100 4558 4.067944 ACAGTAGGTCTTGAGGATCCTT 57.932 45.455 17.42 0.00 31.40 3.36
4103 4561 4.714308 CAGTAGGTCTTGAGGATCCTTCTT 59.286 45.833 17.42 4.04 31.40 2.52
4163 4621 1.134848 AGATTGAACGCAGCCTCTCTC 60.135 52.381 0.00 0.00 0.00 3.20
4187 4645 2.043349 TCGCAGTAGCCAGGCCTA 60.043 61.111 3.98 0.00 37.52 3.93
4189 4647 1.227380 CGCAGTAGCCAGGCCTAAG 60.227 63.158 3.98 0.00 37.52 2.18
4191 4649 0.105778 GCAGTAGCCAGGCCTAAGAG 59.894 60.000 3.98 0.00 33.58 2.85
4281 4739 5.978322 GCTAAAACCTTCTCGTAGTAGATGG 59.022 44.000 0.00 0.00 43.29 3.51
4298 4756 4.056125 GCCGCCAGGGTTTTGAGC 62.056 66.667 0.00 0.00 38.44 4.26
4313 4771 1.195442 TGAGCCCGACATGGTGGTAA 61.195 55.000 0.00 0.00 35.15 2.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 2.193536 GGTGCGCAAGACCCAGTTT 61.194 57.895 14.00 0.00 43.02 2.66
8 9 4.988598 CGGTGCGCAAGACCCAGT 62.989 66.667 14.00 0.00 43.02 4.00
10 11 4.243008 TTCGGTGCGCAAGACCCA 62.243 61.111 14.00 0.00 43.02 4.51
11 12 3.423154 CTTCGGTGCGCAAGACCC 61.423 66.667 14.00 8.46 43.02 4.46
12 13 1.298859 AATCTTCGGTGCGCAAGACC 61.299 55.000 14.00 8.91 43.02 3.85
13 14 0.517316 AAATCTTCGGTGCGCAAGAC 59.483 50.000 14.00 4.53 43.02 3.01
14 15 1.234821 AAAATCTTCGGTGCGCAAGA 58.765 45.000 14.00 12.57 43.02 3.02
15 16 2.050477 AAAAATCTTCGGTGCGCAAG 57.950 45.000 14.00 10.17 43.44 4.01
35 36 3.496884 GTGTCTGTACCGATGCTCAAAAA 59.503 43.478 0.00 0.00 0.00 1.94
36 37 3.064207 GTGTCTGTACCGATGCTCAAAA 58.936 45.455 0.00 0.00 0.00 2.44
37 38 2.036604 TGTGTCTGTACCGATGCTCAAA 59.963 45.455 0.00 0.00 0.00 2.69
38 39 1.616374 TGTGTCTGTACCGATGCTCAA 59.384 47.619 0.00 0.00 0.00 3.02
39 40 1.253100 TGTGTCTGTACCGATGCTCA 58.747 50.000 0.00 0.00 0.00 4.26
40 41 2.363788 TTGTGTCTGTACCGATGCTC 57.636 50.000 0.00 0.00 0.00 4.26
41 42 2.413837 GTTTGTGTCTGTACCGATGCT 58.586 47.619 0.00 0.00 0.00 3.79
42 43 1.126113 CGTTTGTGTCTGTACCGATGC 59.874 52.381 0.00 0.00 0.00 3.91
43 44 1.126113 GCGTTTGTGTCTGTACCGATG 59.874 52.381 0.00 0.00 0.00 3.84
44 45 1.000506 AGCGTTTGTGTCTGTACCGAT 59.999 47.619 0.00 0.00 0.00 4.18
45 46 0.386476 AGCGTTTGTGTCTGTACCGA 59.614 50.000 0.00 0.00 0.00 4.69
46 47 0.782384 GAGCGTTTGTGTCTGTACCG 59.218 55.000 0.00 0.00 0.00 4.02
47 48 1.860676 TGAGCGTTTGTGTCTGTACC 58.139 50.000 0.00 0.00 0.00 3.34
48 49 5.803461 TGTATATGAGCGTTTGTGTCTGTAC 59.197 40.000 0.00 0.00 0.00 2.90
49 50 5.803461 GTGTATATGAGCGTTTGTGTCTGTA 59.197 40.000 0.00 0.00 0.00 2.74
50 51 4.625742 GTGTATATGAGCGTTTGTGTCTGT 59.374 41.667 0.00 0.00 0.00 3.41
51 52 4.259411 CGTGTATATGAGCGTTTGTGTCTG 60.259 45.833 0.00 0.00 0.00 3.51
52 53 3.857665 CGTGTATATGAGCGTTTGTGTCT 59.142 43.478 0.00 0.00 0.00 3.41
53 54 3.541516 GCGTGTATATGAGCGTTTGTGTC 60.542 47.826 0.00 0.00 0.00 3.67
54 55 2.347452 GCGTGTATATGAGCGTTTGTGT 59.653 45.455 0.00 0.00 0.00 3.72
55 56 2.594269 CGCGTGTATATGAGCGTTTGTG 60.594 50.000 0.00 0.00 46.48 3.33
56 57 1.586578 CGCGTGTATATGAGCGTTTGT 59.413 47.619 0.00 0.00 46.48 2.83
57 58 2.264207 CGCGTGTATATGAGCGTTTG 57.736 50.000 0.00 0.00 46.48 2.93
62 63 2.090658 GTGTATGCGCGTGTATATGAGC 59.909 50.000 13.61 0.41 38.85 4.26
63 64 3.565516 AGTGTATGCGCGTGTATATGAG 58.434 45.455 13.61 0.00 0.00 2.90
64 65 3.003897 TGAGTGTATGCGCGTGTATATGA 59.996 43.478 13.61 0.00 0.00 2.15
65 66 3.305110 TGAGTGTATGCGCGTGTATATG 58.695 45.455 13.61 0.00 0.00 1.78
66 67 3.636282 TGAGTGTATGCGCGTGTATAT 57.364 42.857 13.61 0.00 0.00 0.86
67 68 3.561503 GATGAGTGTATGCGCGTGTATA 58.438 45.455 13.61 2.40 0.00 1.47
68 69 2.394708 GATGAGTGTATGCGCGTGTAT 58.605 47.619 13.61 4.63 0.00 2.29
69 70 1.535226 GGATGAGTGTATGCGCGTGTA 60.535 52.381 13.61 0.00 0.00 2.90
70 71 0.806102 GGATGAGTGTATGCGCGTGT 60.806 55.000 13.61 0.00 0.00 4.49
71 72 1.490693 GGGATGAGTGTATGCGCGTG 61.491 60.000 13.61 0.00 0.00 5.34
72 73 1.227263 GGGATGAGTGTATGCGCGT 60.227 57.895 8.43 7.55 0.00 6.01
73 74 0.313987 TAGGGATGAGTGTATGCGCG 59.686 55.000 0.00 0.00 0.00 6.86
74 75 2.029020 TCATAGGGATGAGTGTATGCGC 60.029 50.000 0.00 0.00 37.15 6.09
75 76 3.942130 TCATAGGGATGAGTGTATGCG 57.058 47.619 0.00 0.00 37.15 4.73
76 77 3.990469 CGTTCATAGGGATGAGTGTATGC 59.010 47.826 0.00 0.00 43.03 3.14
77 78 3.990469 GCGTTCATAGGGATGAGTGTATG 59.010 47.826 0.00 0.00 43.03 2.39
78 79 3.641436 TGCGTTCATAGGGATGAGTGTAT 59.359 43.478 0.00 0.00 43.03 2.29
79 80 3.028130 TGCGTTCATAGGGATGAGTGTA 58.972 45.455 0.00 0.00 43.03 2.90
80 81 1.831106 TGCGTTCATAGGGATGAGTGT 59.169 47.619 0.00 0.00 43.03 3.55
81 82 2.205074 GTGCGTTCATAGGGATGAGTG 58.795 52.381 0.00 0.00 43.03 3.51
82 83 1.831106 TGTGCGTTCATAGGGATGAGT 59.169 47.619 0.00 0.00 43.03 3.41
83 84 2.205074 GTGTGCGTTCATAGGGATGAG 58.795 52.381 0.00 0.00 43.03 2.90
84 85 1.552792 TGTGTGCGTTCATAGGGATGA 59.447 47.619 0.00 0.00 40.45 2.92
85 86 1.665679 GTGTGTGCGTTCATAGGGATG 59.334 52.381 0.00 0.00 0.00 3.51
86 87 1.739035 CGTGTGTGCGTTCATAGGGAT 60.739 52.381 0.00 0.00 0.00 3.85
87 88 0.389296 CGTGTGTGCGTTCATAGGGA 60.389 55.000 0.00 0.00 0.00 4.20
88 89 1.966493 GCGTGTGTGCGTTCATAGGG 61.966 60.000 0.00 0.00 0.00 3.53
89 90 1.288419 TGCGTGTGTGCGTTCATAGG 61.288 55.000 0.00 0.00 37.81 2.57
90 91 0.179250 GTGCGTGTGTGCGTTCATAG 60.179 55.000 0.00 0.00 37.81 2.23
91 92 0.876342 TGTGCGTGTGTGCGTTCATA 60.876 50.000 0.00 0.00 37.81 2.15
92 93 2.176926 TGTGCGTGTGTGCGTTCAT 61.177 52.632 0.00 0.00 37.81 2.57
93 94 2.815647 TGTGCGTGTGTGCGTTCA 60.816 55.556 0.00 0.00 37.81 3.18
94 95 2.350760 GTGTGCGTGTGTGCGTTC 60.351 61.111 0.00 0.00 37.81 3.95
95 96 3.871574 GGTGTGCGTGTGTGCGTT 61.872 61.111 0.00 0.00 37.81 4.84
98 99 2.280524 TAGGGTGTGCGTGTGTGC 60.281 61.111 0.00 0.00 0.00 4.57
99 100 1.959226 GGTAGGGTGTGCGTGTGTG 60.959 63.158 0.00 0.00 0.00 3.82
100 101 2.424302 GGTAGGGTGTGCGTGTGT 59.576 61.111 0.00 0.00 0.00 3.72
101 102 2.358247 GGGTAGGGTGTGCGTGTG 60.358 66.667 0.00 0.00 0.00 3.82
102 103 2.735151 TAGGGGTAGGGTGTGCGTGT 62.735 60.000 0.00 0.00 0.00 4.49
103 104 1.335132 ATAGGGGTAGGGTGTGCGTG 61.335 60.000 0.00 0.00 0.00 5.34
104 105 1.002533 ATAGGGGTAGGGTGTGCGT 59.997 57.895 0.00 0.00 0.00 5.24
105 106 1.046472 TCATAGGGGTAGGGTGTGCG 61.046 60.000 0.00 0.00 0.00 5.34
106 107 0.759346 CTCATAGGGGTAGGGTGTGC 59.241 60.000 0.00 0.00 0.00 4.57
107 108 0.759346 GCTCATAGGGGTAGGGTGTG 59.241 60.000 0.00 0.00 0.00 3.82
108 109 0.341961 TGCTCATAGGGGTAGGGTGT 59.658 55.000 0.00 0.00 0.00 4.16
109 110 0.759346 GTGCTCATAGGGGTAGGGTG 59.241 60.000 0.00 0.00 0.00 4.61
110 111 0.400093 GGTGCTCATAGGGGTAGGGT 60.400 60.000 0.00 0.00 0.00 4.34
111 112 0.104934 AGGTGCTCATAGGGGTAGGG 60.105 60.000 0.00 0.00 0.00 3.53
112 113 1.343069 GAGGTGCTCATAGGGGTAGG 58.657 60.000 0.00 0.00 0.00 3.18
113 114 1.343069 GGAGGTGCTCATAGGGGTAG 58.657 60.000 0.00 0.00 31.08 3.18
114 115 0.469331 CGGAGGTGCTCATAGGGGTA 60.469 60.000 0.00 0.00 31.08 3.69
115 116 1.762460 CGGAGGTGCTCATAGGGGT 60.762 63.158 0.00 0.00 31.08 4.95
116 117 1.048724 TTCGGAGGTGCTCATAGGGG 61.049 60.000 0.00 0.00 31.08 4.79
117 118 0.830648 TTTCGGAGGTGCTCATAGGG 59.169 55.000 0.00 0.00 31.08 3.53
118 119 1.757118 TCTTTCGGAGGTGCTCATAGG 59.243 52.381 0.00 0.00 31.08 2.57
119 120 2.428890 AGTCTTTCGGAGGTGCTCATAG 59.571 50.000 0.00 0.00 31.08 2.23
120 121 2.166459 CAGTCTTTCGGAGGTGCTCATA 59.834 50.000 0.00 0.00 31.08 2.15
121 122 1.066573 CAGTCTTTCGGAGGTGCTCAT 60.067 52.381 0.00 0.00 31.08 2.90
122 123 0.318441 CAGTCTTTCGGAGGTGCTCA 59.682 55.000 0.00 0.00 31.08 4.26
123 124 0.603569 TCAGTCTTTCGGAGGTGCTC 59.396 55.000 0.00 0.00 0.00 4.26
124 125 0.605589 CTCAGTCTTTCGGAGGTGCT 59.394 55.000 0.00 0.00 35.32 4.40
125 126 1.016653 GCTCAGTCTTTCGGAGGTGC 61.017 60.000 0.00 0.00 38.48 5.01
126 127 0.390472 GGCTCAGTCTTTCGGAGGTG 60.390 60.000 0.00 0.00 38.48 4.00
127 128 1.878656 CGGCTCAGTCTTTCGGAGGT 61.879 60.000 0.00 0.00 38.48 3.85
128 129 1.153745 CGGCTCAGTCTTTCGGAGG 60.154 63.158 0.00 0.00 38.48 4.30
129 130 1.153745 CCGGCTCAGTCTTTCGGAG 60.154 63.158 0.00 0.00 42.94 4.63
130 131 2.970639 CCGGCTCAGTCTTTCGGA 59.029 61.111 0.00 0.00 42.94 4.55
131 132 2.815647 GCCGGCTCAGTCTTTCGG 60.816 66.667 22.15 0.00 43.13 4.30
132 133 0.179111 TATGCCGGCTCAGTCTTTCG 60.179 55.000 29.70 0.00 0.00 3.46
133 134 2.139118 GATATGCCGGCTCAGTCTTTC 58.861 52.381 29.70 9.22 0.00 2.62
134 135 1.486310 TGATATGCCGGCTCAGTCTTT 59.514 47.619 29.70 3.35 0.00 2.52
135 136 1.123077 TGATATGCCGGCTCAGTCTT 58.877 50.000 29.70 5.10 0.00 3.01
136 137 1.274728 GATGATATGCCGGCTCAGTCT 59.725 52.381 29.70 8.26 0.00 3.24
137 138 1.274728 AGATGATATGCCGGCTCAGTC 59.725 52.381 29.70 19.55 0.00 3.51
138 139 1.346062 AGATGATATGCCGGCTCAGT 58.654 50.000 29.70 13.44 0.00 3.41
139 140 2.074576 CAAGATGATATGCCGGCTCAG 58.925 52.381 29.70 7.35 0.00 3.35
140 141 1.693606 TCAAGATGATATGCCGGCTCA 59.306 47.619 29.70 23.34 0.00 4.26
141 142 2.028658 TCTCAAGATGATATGCCGGCTC 60.029 50.000 29.70 17.89 0.00 4.70
142 143 1.973515 TCTCAAGATGATATGCCGGCT 59.026 47.619 29.70 15.76 0.00 5.52
143 144 2.462456 TCTCAAGATGATATGCCGGC 57.538 50.000 22.73 22.73 0.00 6.13
144 145 5.062683 CGTAAATCTCAAGATGATATGCCGG 59.937 44.000 0.00 0.00 34.49 6.13
145 146 5.863935 TCGTAAATCTCAAGATGATATGCCG 59.136 40.000 0.00 0.00 34.49 5.69
146 147 7.386299 ACTTCGTAAATCTCAAGATGATATGCC 59.614 37.037 0.00 0.00 34.49 4.40
147 148 8.304202 ACTTCGTAAATCTCAAGATGATATGC 57.696 34.615 0.00 0.00 34.49 3.14
148 149 9.468532 TGACTTCGTAAATCTCAAGATGATATG 57.531 33.333 0.00 0.00 34.49 1.78
150 151 9.684448 GATGACTTCGTAAATCTCAAGATGATA 57.316 33.333 0.00 0.00 34.49 2.15
151 152 7.380870 CGATGACTTCGTAAATCTCAAGATGAT 59.619 37.037 2.72 0.00 43.01 2.45
152 153 6.693113 CGATGACTTCGTAAATCTCAAGATGA 59.307 38.462 2.72 0.00 43.01 2.92
153 154 6.861158 CGATGACTTCGTAAATCTCAAGATG 58.139 40.000 2.72 0.00 43.01 2.90
168 169 0.595310 GAGGCGCCTACGATGACTTC 60.595 60.000 32.97 9.38 43.93 3.01
169 170 1.437986 GAGGCGCCTACGATGACTT 59.562 57.895 32.97 2.04 43.93 3.01
170 171 2.835705 CGAGGCGCCTACGATGACT 61.836 63.158 32.97 3.02 43.93 3.41
171 172 2.353607 CGAGGCGCCTACGATGAC 60.354 66.667 32.97 14.51 43.93 3.06
172 173 2.827190 ACGAGGCGCCTACGATGA 60.827 61.111 37.37 0.00 43.93 2.92
173 174 2.353607 GACGAGGCGCCTACGATG 60.354 66.667 37.37 24.97 43.93 3.84
174 175 3.950254 CGACGAGGCGCCTACGAT 61.950 66.667 37.37 26.68 43.93 3.73
176 177 4.883300 GACGACGAGGCGCCTACG 62.883 72.222 32.91 32.91 44.07 3.51
196 197 0.961358 AGTGGGAGGAGACGTTCTCG 60.961 60.000 0.00 0.00 44.28 4.04
197 198 0.528470 CAGTGGGAGGAGACGTTCTC 59.472 60.000 0.00 0.00 42.66 2.87
198 199 0.112606 TCAGTGGGAGGAGACGTTCT 59.887 55.000 0.00 0.00 0.00 3.01
199 200 0.966920 TTCAGTGGGAGGAGACGTTC 59.033 55.000 0.00 0.00 0.00 3.95
200 201 1.344763 CTTTCAGTGGGAGGAGACGTT 59.655 52.381 0.00 0.00 0.00 3.99
201 202 0.969894 CTTTCAGTGGGAGGAGACGT 59.030 55.000 0.00 0.00 0.00 4.34
202 203 0.390472 GCTTTCAGTGGGAGGAGACG 60.390 60.000 0.00 0.00 0.00 4.18
203 204 0.390472 CGCTTTCAGTGGGAGGAGAC 60.390 60.000 0.00 0.00 0.00 3.36
204 205 0.832135 ACGCTTTCAGTGGGAGGAGA 60.832 55.000 0.00 0.00 0.00 3.71
205 206 0.895530 TACGCTTTCAGTGGGAGGAG 59.104 55.000 0.00 0.00 0.00 3.69
206 207 1.480954 GATACGCTTTCAGTGGGAGGA 59.519 52.381 0.00 0.00 0.00 3.71
207 208 1.802880 CGATACGCTTTCAGTGGGAGG 60.803 57.143 0.00 0.00 0.00 4.30
208 209 1.560923 CGATACGCTTTCAGTGGGAG 58.439 55.000 0.00 0.00 0.00 4.30
209 210 3.733236 CGATACGCTTTCAGTGGGA 57.267 52.632 0.00 0.00 0.00 4.37
221 222 4.349663 TTTCAGGATTTTTGGCGATACG 57.650 40.909 0.00 0.00 0.00 3.06
222 223 8.871686 ATTTATTTCAGGATTTTTGGCGATAC 57.128 30.769 0.00 0.00 0.00 2.24
223 224 8.141268 GGATTTATTTCAGGATTTTTGGCGATA 58.859 33.333 0.00 0.00 0.00 2.92
224 225 6.986231 GGATTTATTTCAGGATTTTTGGCGAT 59.014 34.615 0.00 0.00 0.00 4.58
225 226 6.071108 TGGATTTATTTCAGGATTTTTGGCGA 60.071 34.615 0.00 0.00 0.00 5.54
226 227 6.105333 TGGATTTATTTCAGGATTTTTGGCG 58.895 36.000 0.00 0.00 0.00 5.69
227 228 7.920160 TTGGATTTATTTCAGGATTTTTGGC 57.080 32.000 0.00 0.00 0.00 4.52
235 236 9.311916 CGCATTATTTTTGGATTTATTTCAGGA 57.688 29.630 0.00 0.00 0.00 3.86
236 237 9.311916 TCGCATTATTTTTGGATTTATTTCAGG 57.688 29.630 0.00 0.00 0.00 3.86
238 239 8.816144 GCTCGCATTATTTTTGGATTTATTTCA 58.184 29.630 0.00 0.00 0.00 2.69
239 240 8.816144 TGCTCGCATTATTTTTGGATTTATTTC 58.184 29.630 0.00 0.00 0.00 2.17
240 241 8.603181 GTGCTCGCATTATTTTTGGATTTATTT 58.397 29.630 0.00 0.00 0.00 1.40
241 242 7.224557 GGTGCTCGCATTATTTTTGGATTTATT 59.775 33.333 0.00 0.00 0.00 1.40
242 243 6.701400 GGTGCTCGCATTATTTTTGGATTTAT 59.299 34.615 0.00 0.00 0.00 1.40
243 244 6.039616 GGTGCTCGCATTATTTTTGGATTTA 58.960 36.000 0.00 0.00 0.00 1.40
244 245 4.869861 GGTGCTCGCATTATTTTTGGATTT 59.130 37.500 0.00 0.00 0.00 2.17
245 246 4.081752 TGGTGCTCGCATTATTTTTGGATT 60.082 37.500 0.00 0.00 0.00 3.01
246 247 3.446873 TGGTGCTCGCATTATTTTTGGAT 59.553 39.130 0.00 0.00 0.00 3.41
247 248 2.822561 TGGTGCTCGCATTATTTTTGGA 59.177 40.909 0.00 0.00 0.00 3.53
248 249 3.181397 CTGGTGCTCGCATTATTTTTGG 58.819 45.455 0.00 0.00 0.00 3.28
249 250 3.119531 TCCTGGTGCTCGCATTATTTTTG 60.120 43.478 0.00 0.00 0.00 2.44
250 251 3.088532 TCCTGGTGCTCGCATTATTTTT 58.911 40.909 0.00 0.00 0.00 1.94
251 252 2.722094 TCCTGGTGCTCGCATTATTTT 58.278 42.857 0.00 0.00 0.00 1.82
252 253 2.418368 TCCTGGTGCTCGCATTATTT 57.582 45.000 0.00 0.00 0.00 1.40
253 254 2.645838 ATCCTGGTGCTCGCATTATT 57.354 45.000 0.00 0.00 0.00 1.40
254 255 2.645838 AATCCTGGTGCTCGCATTAT 57.354 45.000 0.00 0.00 0.00 1.28
255 256 2.418368 AAATCCTGGTGCTCGCATTA 57.582 45.000 0.00 0.00 0.00 1.90
256 257 2.418368 TAAATCCTGGTGCTCGCATT 57.582 45.000 0.00 0.00 0.00 3.56
257 258 2.418368 TTAAATCCTGGTGCTCGCAT 57.582 45.000 0.00 0.00 0.00 4.73
258 259 1.810151 GTTTAAATCCTGGTGCTCGCA 59.190 47.619 0.00 0.00 0.00 5.10
259 260 1.132453 GGTTTAAATCCTGGTGCTCGC 59.868 52.381 0.00 0.00 0.00 5.03
260 261 1.743394 GGGTTTAAATCCTGGTGCTCG 59.257 52.381 10.45 0.00 0.00 5.03
261 262 3.087370 AGGGTTTAAATCCTGGTGCTC 57.913 47.619 19.53 0.00 38.36 4.26
279 280 2.065007 TGATATCCCCAACCCATCAGG 58.935 52.381 0.00 0.00 43.78 3.86
280 281 2.713167 AGTGATATCCCCAACCCATCAG 59.287 50.000 0.00 0.00 0.00 2.90
281 282 2.442878 CAGTGATATCCCCAACCCATCA 59.557 50.000 0.00 0.00 0.00 3.07
282 283 2.443255 ACAGTGATATCCCCAACCCATC 59.557 50.000 0.00 0.00 0.00 3.51
283 284 2.443255 GACAGTGATATCCCCAACCCAT 59.557 50.000 0.00 0.00 0.00 4.00
284 285 1.843851 GACAGTGATATCCCCAACCCA 59.156 52.381 0.00 0.00 0.00 4.51
285 286 1.143073 GGACAGTGATATCCCCAACCC 59.857 57.143 0.00 0.00 0.00 4.11
286 287 1.843851 TGGACAGTGATATCCCCAACC 59.156 52.381 0.00 0.00 0.00 3.77
287 288 2.421529 GGTGGACAGTGATATCCCCAAC 60.422 54.545 0.00 0.00 0.00 3.77
288 289 1.843851 GGTGGACAGTGATATCCCCAA 59.156 52.381 0.00 0.00 0.00 4.12
289 290 1.009552 AGGTGGACAGTGATATCCCCA 59.990 52.381 0.00 0.00 0.00 4.96
290 291 1.807814 AGGTGGACAGTGATATCCCC 58.192 55.000 0.00 0.00 0.00 4.81
291 292 4.593206 TGATTAGGTGGACAGTGATATCCC 59.407 45.833 0.00 0.00 0.00 3.85
292 293 5.808366 TGATTAGGTGGACAGTGATATCC 57.192 43.478 0.00 0.00 0.00 2.59
293 294 6.821388 AGTTGATTAGGTGGACAGTGATATC 58.179 40.000 0.00 0.00 0.00 1.63
294 295 6.384015 TGAGTTGATTAGGTGGACAGTGATAT 59.616 38.462 0.00 0.00 0.00 1.63
295 296 5.719563 TGAGTTGATTAGGTGGACAGTGATA 59.280 40.000 0.00 0.00 0.00 2.15
296 297 4.532126 TGAGTTGATTAGGTGGACAGTGAT 59.468 41.667 0.00 0.00 0.00 3.06
297 298 3.901222 TGAGTTGATTAGGTGGACAGTGA 59.099 43.478 0.00 0.00 0.00 3.41
298 299 4.271696 TGAGTTGATTAGGTGGACAGTG 57.728 45.455 0.00 0.00 0.00 3.66
299 300 4.505039 GGTTGAGTTGATTAGGTGGACAGT 60.505 45.833 0.00 0.00 0.00 3.55
300 301 4.003648 GGTTGAGTTGATTAGGTGGACAG 58.996 47.826 0.00 0.00 0.00 3.51
301 302 3.392947 TGGTTGAGTTGATTAGGTGGACA 59.607 43.478 0.00 0.00 0.00 4.02
302 303 4.015872 TGGTTGAGTTGATTAGGTGGAC 57.984 45.455 0.00 0.00 0.00 4.02
303 304 4.927267 ATGGTTGAGTTGATTAGGTGGA 57.073 40.909 0.00 0.00 0.00 4.02
304 305 5.126067 CCTATGGTTGAGTTGATTAGGTGG 58.874 45.833 0.00 0.00 0.00 4.61
305 306 5.745227 ACCTATGGTTGAGTTGATTAGGTG 58.255 41.667 0.00 0.00 37.24 4.00
306 307 6.388619 AACCTATGGTTGAGTTGATTAGGT 57.611 37.500 0.71 0.00 45.07 3.08
319 320 5.024133 CGCAAGCGAATCAACCTATGGTT 62.024 47.826 9.11 0.00 43.96 3.67
320 321 2.017049 GCAAGCGAATCAACCTATGGT 58.983 47.619 0.00 0.00 37.65 3.55
321 322 1.003545 CGCAAGCGAATCAACCTATGG 60.004 52.381 9.11 0.00 42.83 2.74
322 323 2.373735 CGCAAGCGAATCAACCTATG 57.626 50.000 9.11 0.00 42.83 2.23
336 337 1.421382 CCAGATTTTTGGTGCGCAAG 58.579 50.000 14.00 0.00 33.38 4.01
337 338 0.033228 CCCAGATTTTTGGTGCGCAA 59.967 50.000 14.00 0.00 36.45 4.85
338 339 1.664873 CCCAGATTTTTGGTGCGCA 59.335 52.632 5.66 5.66 36.45 6.09
339 340 1.079888 CCCCAGATTTTTGGTGCGC 60.080 57.895 0.00 0.00 36.45 6.09
340 341 0.897863 TCCCCCAGATTTTTGGTGCG 60.898 55.000 0.00 0.00 36.45 5.34
341 342 0.897621 CTCCCCCAGATTTTTGGTGC 59.102 55.000 0.00 0.00 36.45 5.01
342 343 2.603075 TCTCCCCCAGATTTTTGGTG 57.397 50.000 0.00 0.00 36.45 4.17
343 344 3.510459 CTTTCTCCCCCAGATTTTTGGT 58.490 45.455 0.00 0.00 36.45 3.67
344 345 2.234661 GCTTTCTCCCCCAGATTTTTGG 59.765 50.000 0.00 0.00 38.00 3.28
345 346 2.899256 TGCTTTCTCCCCCAGATTTTTG 59.101 45.455 0.00 0.00 0.00 2.44
346 347 2.899900 GTGCTTTCTCCCCCAGATTTTT 59.100 45.455 0.00 0.00 0.00 1.94
347 348 2.529632 GTGCTTTCTCCCCCAGATTTT 58.470 47.619 0.00 0.00 0.00 1.82
348 349 1.614317 CGTGCTTTCTCCCCCAGATTT 60.614 52.381 0.00 0.00 0.00 2.17
349 350 0.035056 CGTGCTTTCTCCCCCAGATT 60.035 55.000 0.00 0.00 0.00 2.40
350 351 0.909610 TCGTGCTTTCTCCCCCAGAT 60.910 55.000 0.00 0.00 0.00 2.90
351 352 0.909610 ATCGTGCTTTCTCCCCCAGA 60.910 55.000 0.00 0.00 0.00 3.86
352 353 0.462759 GATCGTGCTTTCTCCCCCAG 60.463 60.000 0.00 0.00 0.00 4.45
353 354 1.602237 GATCGTGCTTTCTCCCCCA 59.398 57.895 0.00 0.00 0.00 4.96
360 361 2.209838 TCATCTCCGATCGTGCTTTC 57.790 50.000 15.09 0.00 0.00 2.62
361 362 2.159043 ACATCATCTCCGATCGTGCTTT 60.159 45.455 15.09 0.00 0.00 3.51
393 394 2.654912 CCACGTTTCCAGACGCGTC 61.655 63.158 31.30 31.30 46.47 5.19
413 414 2.482296 AAAGGTAGCACGGGTCGACG 62.482 60.000 9.92 1.01 40.31 5.12
418 419 1.951602 GTTTTCAAAGGTAGCACGGGT 59.048 47.619 0.00 0.00 0.00 5.28
427 428 2.814336 GAGAGCCATCGTTTTCAAAGGT 59.186 45.455 0.00 0.00 0.00 3.50
428 429 2.162408 GGAGAGCCATCGTTTTCAAAGG 59.838 50.000 0.00 0.00 0.00 3.11
453 456 0.965866 CTGGTGCCGTGAGTAGAGGA 60.966 60.000 0.00 0.00 0.00 3.71
464 467 4.527509 AATCTATACATCTCTGGTGCCG 57.472 45.455 0.00 0.00 0.00 5.69
466 469 6.071672 TGAGCTAATCTATACATCTCTGGTGC 60.072 42.308 0.00 0.00 0.00 5.01
487 490 3.333969 GCGCGTCCAGCTATGAGC 61.334 66.667 8.43 0.00 45.59 4.26
488 491 0.030773 TAAGCGCGTCCAGCTATGAG 59.969 55.000 8.43 0.00 45.31 2.90
489 492 0.458260 TTAAGCGCGTCCAGCTATGA 59.542 50.000 8.43 0.00 45.31 2.15
490 493 1.457303 GATTAAGCGCGTCCAGCTATG 59.543 52.381 8.43 0.00 45.31 2.23
491 494 1.341531 AGATTAAGCGCGTCCAGCTAT 59.658 47.619 8.43 0.00 45.31 2.97
492 495 0.744874 AGATTAAGCGCGTCCAGCTA 59.255 50.000 8.43 0.00 45.31 3.32
494 497 1.567504 TTAGATTAAGCGCGTCCAGC 58.432 50.000 8.43 0.00 43.95 4.85
495 498 2.731976 GGATTAGATTAAGCGCGTCCAG 59.268 50.000 8.43 0.00 0.00 3.86
496 499 2.750948 GGATTAGATTAAGCGCGTCCA 58.249 47.619 8.43 0.00 0.00 4.02
497 500 1.719780 CGGATTAGATTAAGCGCGTCC 59.280 52.381 8.43 0.92 0.00 4.79
498 501 2.658285 TCGGATTAGATTAAGCGCGTC 58.342 47.619 8.43 0.00 0.00 5.19
499 502 2.787601 TCGGATTAGATTAAGCGCGT 57.212 45.000 8.43 0.00 0.00 6.01
500 503 2.599082 GGATCGGATTAGATTAAGCGCG 59.401 50.000 0.00 0.00 0.00 6.86
501 504 2.599082 CGGATCGGATTAGATTAAGCGC 59.401 50.000 0.00 0.00 0.00 5.92
502 505 2.599082 GCGGATCGGATTAGATTAAGCG 59.401 50.000 4.16 0.00 0.00 4.68
503 506 2.599082 CGCGGATCGGATTAGATTAAGC 59.401 50.000 4.16 0.00 33.78 3.09
524 527 3.557290 GGGTCTGCCGGGTATCCC 61.557 72.222 2.18 9.06 41.09 3.85
525 528 2.446036 AGGGTCTGCCGGGTATCC 60.446 66.667 2.18 0.00 34.97 2.59
526 529 2.508751 GGAGGGTCTGCCGGGTATC 61.509 68.421 2.18 0.00 34.97 2.24
527 530 2.446036 GGAGGGTCTGCCGGGTAT 60.446 66.667 2.18 0.00 34.97 2.73
528 531 3.976490 CTGGAGGGTCTGCCGGGTA 62.976 68.421 2.18 0.00 34.97 3.69
533 536 2.828480 GAAAGCCTGGAGGGTCTGCC 62.828 65.000 0.00 0.00 46.73 4.85
534 537 1.377856 GAAAGCCTGGAGGGTCTGC 60.378 63.158 0.00 0.00 46.73 4.26
535 538 1.301293 GGAAAGCCTGGAGGGTCTG 59.699 63.158 0.00 0.00 46.73 3.51
536 539 1.151810 TGGAAAGCCTGGAGGGTCT 60.152 57.895 0.00 0.00 46.73 3.85
537 540 1.002011 GTGGAAAGCCTGGAGGGTC 60.002 63.158 0.00 0.00 46.73 4.46
539 542 2.045926 CGTGGAAAGCCTGGAGGG 60.046 66.667 0.00 0.00 35.18 4.30
540 543 1.376037 GACGTGGAAAGCCTGGAGG 60.376 63.158 0.00 0.00 38.53 4.30
541 544 1.738099 CGACGTGGAAAGCCTGGAG 60.738 63.158 0.00 0.00 34.31 3.86
542 545 1.541310 ATCGACGTGGAAAGCCTGGA 61.541 55.000 3.81 0.00 34.31 3.86
543 546 0.174845 TATCGACGTGGAAAGCCTGG 59.825 55.000 3.81 0.00 34.31 4.45
544 547 2.004583 TTATCGACGTGGAAAGCCTG 57.995 50.000 3.81 0.00 34.31 4.85
545 548 2.167693 TCATTATCGACGTGGAAAGCCT 59.832 45.455 3.81 0.00 34.31 4.58
546 549 2.284417 GTCATTATCGACGTGGAAAGCC 59.716 50.000 3.81 0.00 0.00 4.35
547 550 3.000322 CAGTCATTATCGACGTGGAAAGC 60.000 47.826 3.81 0.00 40.98 3.51
548 551 3.551890 CCAGTCATTATCGACGTGGAAAG 59.448 47.826 3.81 0.00 40.98 2.62
549 552 3.193903 TCCAGTCATTATCGACGTGGAAA 59.806 43.478 3.81 1.26 38.82 3.13
550 553 2.756207 TCCAGTCATTATCGACGTGGAA 59.244 45.455 3.81 0.00 38.82 3.53
551 554 2.371306 TCCAGTCATTATCGACGTGGA 58.629 47.619 1.72 1.72 40.98 4.02
552 555 2.863401 TCCAGTCATTATCGACGTGG 57.137 50.000 0.00 0.00 40.98 4.94
553 556 4.917998 CCTTATCCAGTCATTATCGACGTG 59.082 45.833 0.00 0.00 40.98 4.49
554 557 4.583489 ACCTTATCCAGTCATTATCGACGT 59.417 41.667 0.00 0.00 40.98 4.34
555 558 5.122512 ACCTTATCCAGTCATTATCGACG 57.877 43.478 0.00 0.00 40.98 5.12
556 559 6.984474 TGAAACCTTATCCAGTCATTATCGAC 59.016 38.462 0.00 0.00 36.08 4.20
557 560 7.119709 TGAAACCTTATCCAGTCATTATCGA 57.880 36.000 0.00 0.00 0.00 3.59
558 561 7.786178 TTGAAACCTTATCCAGTCATTATCG 57.214 36.000 0.00 0.00 0.00 2.92
559 562 9.342308 TGATTGAAACCTTATCCAGTCATTATC 57.658 33.333 0.00 0.00 0.00 1.75
560 563 9.699410 TTGATTGAAACCTTATCCAGTCATTAT 57.301 29.630 0.00 0.00 0.00 1.28
561 564 9.699410 ATTGATTGAAACCTTATCCAGTCATTA 57.301 29.630 0.00 0.00 0.00 1.90
562 565 8.599624 ATTGATTGAAACCTTATCCAGTCATT 57.400 30.769 0.00 0.00 0.00 2.57
563 566 7.835682 TGATTGATTGAAACCTTATCCAGTCAT 59.164 33.333 0.00 0.00 0.00 3.06
564 567 7.174413 TGATTGATTGAAACCTTATCCAGTCA 58.826 34.615 0.00 0.00 0.00 3.41
565 568 7.630242 TGATTGATTGAAACCTTATCCAGTC 57.370 36.000 0.00 0.00 0.00 3.51
566 569 7.093771 GGTTGATTGATTGAAACCTTATCCAGT 60.094 37.037 0.00 0.00 39.21 4.00
567 570 7.093814 TGGTTGATTGATTGAAACCTTATCCAG 60.094 37.037 5.15 0.00 42.15 3.86
568 571 6.723515 TGGTTGATTGATTGAAACCTTATCCA 59.276 34.615 5.15 0.00 42.15 3.41
569 572 7.122650 TCTGGTTGATTGATTGAAACCTTATCC 59.877 37.037 5.15 0.00 42.15 2.59
570 573 8.055279 TCTGGTTGATTGATTGAAACCTTATC 57.945 34.615 5.15 0.00 42.15 1.75
571 574 8.421249 TTCTGGTTGATTGATTGAAACCTTAT 57.579 30.769 5.15 0.00 42.15 1.73
572 575 7.831691 TTCTGGTTGATTGATTGAAACCTTA 57.168 32.000 5.15 0.00 42.15 2.69
573 576 6.729690 TTCTGGTTGATTGATTGAAACCTT 57.270 33.333 5.15 0.00 42.15 3.50
574 577 6.729690 TTTCTGGTTGATTGATTGAAACCT 57.270 33.333 5.15 0.00 42.15 3.50
575 578 7.784633 TTTTTCTGGTTGATTGATTGAAACC 57.215 32.000 0.00 0.00 42.03 3.27
623 796 6.117488 ACTTGGGTAAATAATAACCGTCCTG 58.883 40.000 0.00 0.00 36.57 3.86
678 853 6.243216 AGGTTGGCCGTTTATTATCTTAGA 57.757 37.500 0.00 0.00 40.50 2.10
679 854 6.937436 AAGGTTGGCCGTTTATTATCTTAG 57.063 37.500 0.00 0.00 40.50 2.18
680 855 7.706100 AAAAGGTTGGCCGTTTATTATCTTA 57.294 32.000 0.00 0.00 43.02 2.10
681 856 6.599356 AAAAGGTTGGCCGTTTATTATCTT 57.401 33.333 0.00 0.00 43.02 2.40
712 889 9.311916 CATATAAAATCCAGGAAAAATCGCAAA 57.688 29.630 0.00 0.00 0.00 3.68
713 891 7.437862 GCATATAAAATCCAGGAAAAATCGCAA 59.562 33.333 0.00 0.00 0.00 4.85
737 915 7.493320 CCTACGTGGAGTGTAAATAATAAAGCA 59.507 37.037 0.00 0.00 38.35 3.91
763 941 2.415168 TCATGTCTCGGCATTCGTTTTC 59.585 45.455 0.00 0.00 40.32 2.29
773 955 2.415893 CCAATGGTTTTCATGTCTCGGC 60.416 50.000 0.00 0.00 35.99 5.54
782 964 1.834378 TGGCCGCCAATGGTTTTCA 60.834 52.632 10.50 0.00 0.00 2.69
811 993 1.073373 TTGGTGGGAAATTCGCGGA 59.927 52.632 6.13 0.00 31.21 5.54
815 997 0.519961 GTCGGTTGGTGGGAAATTCG 59.480 55.000 0.00 0.00 0.00 3.34
920 1106 1.301716 TCTCCTTTGTCTGCGTGCC 60.302 57.895 0.00 0.00 0.00 5.01
935 1121 2.262915 CTGTGCTGTCCCCGTCTC 59.737 66.667 0.00 0.00 0.00 3.36
975 1161 1.227002 GACGTGCGAATCTCTCCCC 60.227 63.158 0.00 0.00 0.00 4.81
977 1163 2.224885 GCGACGTGCGAATCTCTCC 61.225 63.158 10.82 0.00 44.57 3.71
1179 1399 1.971695 GAGGGGGTTCTTGTTGGCG 60.972 63.158 0.00 0.00 0.00 5.69
1210 1430 1.362717 GCTAGCGGATAACGGAGCA 59.637 57.895 0.00 0.00 44.51 4.26
1401 1668 3.254014 CTCCAAAACCAGCACGCCG 62.254 63.158 0.00 0.00 0.00 6.46
1458 1729 2.158943 AGTCTGGCCTAGAATTTACGCC 60.159 50.000 3.32 0.00 37.12 5.68
1619 1890 7.628769 TGATCAAATAAATAACTGCTCAGCA 57.371 32.000 0.00 0.00 36.92 4.41
1620 1891 9.525409 AAATGATCAAATAAATAACTGCTCAGC 57.475 29.630 0.00 0.00 0.00 4.26
1643 1914 6.156949 TCTCCAATCTACAAGCCTACTCAAAT 59.843 38.462 0.00 0.00 0.00 2.32
1647 1918 5.353111 GTTCTCCAATCTACAAGCCTACTC 58.647 45.833 0.00 0.00 0.00 2.59
1656 1927 6.183360 GCTCAGAATAGGTTCTCCAATCTACA 60.183 42.308 0.00 0.00 42.73 2.74
1666 1937 2.836981 AGCACAGCTCAGAATAGGTTCT 59.163 45.455 0.00 0.00 45.46 3.01
1673 1944 2.938756 GCCACTAAGCACAGCTCAGAAT 60.939 50.000 0.00 0.00 38.25 2.40
1677 1948 1.754107 TGCCACTAAGCACAGCTCA 59.246 52.632 0.00 0.00 38.25 4.26
1678 1949 4.701663 TGCCACTAAGCACAGCTC 57.298 55.556 0.00 0.00 38.25 4.09
1710 1985 2.911120 CTAGAGCTAAGCGTTCGCTAG 58.089 52.381 19.67 16.42 41.04 3.42
1718 1993 0.249657 CCTTGGGCTAGAGCTAAGCG 60.250 60.000 12.95 1.57 41.70 4.68
1724 2065 0.609131 TTGCAACCTTGGGCTAGAGC 60.609 55.000 0.00 0.00 41.14 4.09
1741 2082 5.063944 AGCGCATAACATTCAGAAGTACTTG 59.936 40.000 14.14 0.00 0.00 3.16
1742 2083 5.178797 AGCGCATAACATTCAGAAGTACTT 58.821 37.500 11.47 8.13 0.00 2.24
1744 2085 5.470845 AAGCGCATAACATTCAGAAGTAC 57.529 39.130 11.47 0.00 0.00 2.73
1747 2088 6.314018 TGTTTAAGCGCATAACATTCAGAAG 58.686 36.000 11.47 0.00 0.00 2.85
1759 2100 4.142600 GGATCTTTGACTGTTTAAGCGCAT 60.143 41.667 11.47 0.00 0.00 4.73
1764 2105 6.348868 GGAAGCTGGATCTTTGACTGTTTAAG 60.349 42.308 0.00 0.00 0.00 1.85
1775 2116 2.312741 TCCAATGGGAAGCTGGATCTTT 59.687 45.455 0.00 0.00 41.32 2.52
1788 2129 0.396695 ATCAAGCCAGCTCCAATGGG 60.397 55.000 0.00 0.00 38.33 4.00
1794 2135 1.382692 GCAGGAATCAAGCCAGCTCC 61.383 60.000 0.00 0.00 35.32 4.70
1801 2142 3.080319 AGAAGAACAGCAGGAATCAAGC 58.920 45.455 0.00 0.00 0.00 4.01
1840 2222 2.487762 GGAGCAAAATCATCGGTGTTGA 59.512 45.455 1.95 0.00 0.00 3.18
1858 2240 2.662006 TGAATCTCTTCACGCTGGAG 57.338 50.000 0.00 0.00 36.46 3.86
1882 2265 3.390967 TCCAGTTCCTCACATCACAAGAA 59.609 43.478 0.00 0.00 0.00 2.52
1886 2269 2.300152 GACTCCAGTTCCTCACATCACA 59.700 50.000 0.00 0.00 0.00 3.58
1899 2282 0.398318 GGTTCAGGCAAGACTCCAGT 59.602 55.000 0.00 0.00 0.00 4.00
1944 2331 8.034804 GGATGCAAAACATAGTGTAGGAAAAAT 58.965 33.333 0.00 0.00 39.84 1.82
1949 2337 4.227300 AGGGATGCAAAACATAGTGTAGGA 59.773 41.667 0.00 0.00 39.84 2.94
1971 2360 0.926155 CATGACGAATCGCCAGACAG 59.074 55.000 1.15 0.00 0.00 3.51
1977 2366 2.541588 CCCATTTTCATGACGAATCGCC 60.542 50.000 1.15 0.00 32.32 5.54
1978 2367 2.354510 TCCCATTTTCATGACGAATCGC 59.645 45.455 1.15 0.00 32.32 4.58
1979 2368 4.094887 ACTTCCCATTTTCATGACGAATCG 59.905 41.667 0.00 0.00 32.32 3.34
1993 2383 7.505585 TCAGAAACTTCAATGTTACTTCCCATT 59.494 33.333 0.00 0.00 0.00 3.16
1995 2385 6.361433 TCAGAAACTTCAATGTTACTTCCCA 58.639 36.000 0.00 0.00 0.00 4.37
2048 2440 5.049749 TCAATTGACACGTAATCCAACTGTG 60.050 40.000 3.38 0.00 36.64 3.66
2049 2441 5.060506 TCAATTGACACGTAATCCAACTGT 58.939 37.500 3.38 0.00 0.00 3.55
2050 2442 5.605564 TCAATTGACACGTAATCCAACTG 57.394 39.130 3.38 0.00 0.00 3.16
2051 2443 7.103641 AGTATCAATTGACACGTAATCCAACT 58.896 34.615 11.07 0.00 0.00 3.16
2052 2444 7.303634 AGTATCAATTGACACGTAATCCAAC 57.696 36.000 11.07 0.00 0.00 3.77
2053 2445 7.389330 ACAAGTATCAATTGACACGTAATCCAA 59.611 33.333 11.07 0.00 0.00 3.53
2054 2446 6.876789 ACAAGTATCAATTGACACGTAATCCA 59.123 34.615 11.07 0.00 0.00 3.41
2055 2447 7.303634 ACAAGTATCAATTGACACGTAATCC 57.696 36.000 11.07 0.00 0.00 3.01
2059 2451 9.425577 TGATTAACAAGTATCAATTGACACGTA 57.574 29.630 11.07 0.00 0.00 3.57
2060 2452 8.317891 TGATTAACAAGTATCAATTGACACGT 57.682 30.769 11.07 4.66 0.00 4.49
2061 2453 9.051027 GTTGATTAACAAGTATCAATTGACACG 57.949 33.333 11.07 0.00 41.35 4.49
2092 2488 2.676471 GTGGGCCGGCTGACAAAT 60.676 61.111 28.56 0.00 0.00 2.32
2093 2489 4.966787 GGTGGGCCGGCTGACAAA 62.967 66.667 28.56 2.58 0.00 2.83
2142 2538 3.056107 ACATGACATGTTGCTAGTACCGT 60.056 43.478 15.48 0.00 41.63 4.83
2145 2541 3.684305 TGCACATGACATGTTGCTAGTAC 59.316 43.478 27.73 11.58 42.70 2.73
2146 2542 3.936564 TGCACATGACATGTTGCTAGTA 58.063 40.909 27.73 13.72 42.70 1.82
2147 2543 2.781923 TGCACATGACATGTTGCTAGT 58.218 42.857 27.73 5.83 42.70 2.57
2148 2544 3.495193 GTTGCACATGACATGTTGCTAG 58.505 45.455 27.73 16.59 42.70 3.42
2186 2582 1.583556 TTAATGAGGCTCAGCTCCCA 58.416 50.000 23.24 0.00 0.00 4.37
2195 2591 4.081642 TCAGCTCGTTAGTTTAATGAGGCT 60.082 41.667 15.91 11.73 46.78 4.58
2196 2592 4.181578 TCAGCTCGTTAGTTTAATGAGGC 58.818 43.478 15.91 10.25 46.78 4.70
2199 2595 4.081642 AGGCTCAGCTCGTTAGTTTAATGA 60.082 41.667 0.00 0.00 33.04 2.57
2205 2601 1.257743 TGAGGCTCAGCTCGTTAGTT 58.742 50.000 14.43 0.00 0.00 2.24
2207 2603 2.593346 AATGAGGCTCAGCTCGTTAG 57.407 50.000 23.24 0.00 0.00 2.34
2208 2604 4.081642 AGTTTAATGAGGCTCAGCTCGTTA 60.082 41.667 23.24 12.78 31.99 3.18
2209 2605 3.003480 GTTTAATGAGGCTCAGCTCGTT 58.997 45.455 23.24 13.79 33.86 3.85
2210 2606 2.234908 AGTTTAATGAGGCTCAGCTCGT 59.765 45.455 23.24 2.13 0.00 4.18
2211 2607 2.898705 AGTTTAATGAGGCTCAGCTCG 58.101 47.619 23.24 0.00 0.00 5.03
2212 2608 5.423886 AGTTAGTTTAATGAGGCTCAGCTC 58.576 41.667 23.24 10.83 0.00 4.09
2213 2609 5.046304 TGAGTTAGTTTAATGAGGCTCAGCT 60.046 40.000 23.24 14.48 0.00 4.24
2214 2610 5.178797 TGAGTTAGTTTAATGAGGCTCAGC 58.821 41.667 23.24 9.98 0.00 4.26
2216 2612 8.540388 ACTTATGAGTTAGTTTAATGAGGCTCA 58.460 33.333 21.19 21.19 36.39 4.26
2217 2613 8.821894 CACTTATGAGTTAGTTTAATGAGGCTC 58.178 37.037 7.79 7.79 32.54 4.70
2219 2615 8.718102 TCACTTATGAGTTAGTTTAATGAGGC 57.282 34.615 0.00 0.00 32.54 4.70
2264 2670 6.635030 AGTTAAGTAAAAGTTGCTTCCCTG 57.365 37.500 0.00 0.00 36.90 4.45
2285 2691 3.678289 TGTTGTCAGCAAGCATGATAGT 58.322 40.909 0.00 0.00 34.94 2.12
2286 2692 4.895224 ATGTTGTCAGCAAGCATGATAG 57.105 40.909 0.00 0.00 34.94 2.08
2363 2796 5.227569 TGTTACTGGAGTCACATCAATGT 57.772 39.130 0.00 0.00 42.84 2.71
2378 2811 4.223320 AGGCAACAAAACGATGTTACTG 57.777 40.909 0.00 0.00 41.44 2.74
2410 2843 8.090214 CCTAAAAAGACACCATCATGTGAATTT 58.910 33.333 0.00 0.00 39.57 1.82
2411 2844 7.605449 CCTAAAAAGACACCATCATGTGAATT 58.395 34.615 0.00 0.00 39.57 2.17
2412 2845 6.350445 GCCTAAAAAGACACCATCATGTGAAT 60.350 38.462 0.00 0.00 39.57 2.57
2423 2856 6.821665 TCACTATACATGCCTAAAAAGACACC 59.178 38.462 0.00 0.00 0.00 4.16
2430 2865 7.831690 TGTTGGAATCACTATACATGCCTAAAA 59.168 33.333 0.00 0.00 0.00 1.52
2442 2877 8.893727 GTTACTGCTATTTGTTGGAATCACTAT 58.106 33.333 0.00 0.00 0.00 2.12
2443 2878 7.880713 TGTTACTGCTATTTGTTGGAATCACTA 59.119 33.333 0.00 0.00 0.00 2.74
2444 2879 6.714810 TGTTACTGCTATTTGTTGGAATCACT 59.285 34.615 0.00 0.00 0.00 3.41
2447 2882 6.974622 CCATGTTACTGCTATTTGTTGGAATC 59.025 38.462 0.00 0.00 0.00 2.52
2478 2913 9.757227 CTCAGGATCACTAATAAGGTAGAAAAG 57.243 37.037 0.00 0.00 0.00 2.27
2486 2922 8.834465 CAACAATTCTCAGGATCACTAATAAGG 58.166 37.037 0.00 0.00 0.00 2.69
2488 2924 9.739276 AACAACAATTCTCAGGATCACTAATAA 57.261 29.630 0.00 0.00 0.00 1.40
2489 2925 9.383519 GAACAACAATTCTCAGGATCACTAATA 57.616 33.333 0.00 0.00 0.00 0.98
2491 2927 7.453393 AGAACAACAATTCTCAGGATCACTAA 58.547 34.615 0.00 0.00 33.50 2.24
2497 2933 7.855375 TCAGATAGAACAACAATTCTCAGGAT 58.145 34.615 0.00 0.00 39.65 3.24
2509 2945 9.469807 CAGGTCAATATACTCAGATAGAACAAC 57.530 37.037 0.00 0.00 0.00 3.32
2512 2948 9.073475 AGTCAGGTCAATATACTCAGATAGAAC 57.927 37.037 0.00 0.00 0.00 3.01
2527 2963 7.227156 AGACAAAAATACAGAGTCAGGTCAAT 58.773 34.615 0.00 0.00 0.00 2.57
2529 2965 6.174720 AGACAAAAATACAGAGTCAGGTCA 57.825 37.500 0.00 0.00 0.00 4.02
2530 2966 7.355778 CAAAGACAAAAATACAGAGTCAGGTC 58.644 38.462 0.00 0.00 0.00 3.85
2532 2968 6.145535 GCAAAGACAAAAATACAGAGTCAGG 58.854 40.000 0.00 0.00 0.00 3.86
2533 2969 6.634436 GTGCAAAGACAAAAATACAGAGTCAG 59.366 38.462 0.00 0.00 0.00 3.51
2534 2970 6.318648 AGTGCAAAGACAAAAATACAGAGTCA 59.681 34.615 0.00 0.00 0.00 3.41
2535 2971 6.729187 AGTGCAAAGACAAAAATACAGAGTC 58.271 36.000 0.00 0.00 0.00 3.36
2536 2972 6.699575 AGTGCAAAGACAAAAATACAGAGT 57.300 33.333 0.00 0.00 0.00 3.24
2537 2973 6.974622 ACAAGTGCAAAGACAAAAATACAGAG 59.025 34.615 0.00 0.00 0.00 3.35
2541 2984 8.227731 GGATACAAGTGCAAAGACAAAAATAC 57.772 34.615 0.00 0.00 0.00 1.89
2575 3019 6.472163 GGCAAAATATGTCATTTACAGAACCG 59.528 38.462 0.00 0.00 42.70 4.44
2584 3028 6.357579 TGGAACAGGCAAAATATGTCATTT 57.642 33.333 0.00 0.00 35.54 2.32
2719 3163 1.687493 GACCTGGCTAGCTGGGAGT 60.687 63.158 25.30 12.88 0.00 3.85
2728 3172 1.213182 AGATCTCTCACGACCTGGCTA 59.787 52.381 0.00 0.00 0.00 3.93
2779 3223 1.259609 AGGTGGATTTCGACACGGTA 58.740 50.000 0.00 0.00 38.46 4.02
2854 3298 8.714179 TGTAACTCAAAACCATATTCAACTACG 58.286 33.333 0.00 0.00 0.00 3.51
2878 3322 2.099098 CCTGTTCAAGAAAAGCGGTTGT 59.901 45.455 0.00 0.00 0.00 3.32
2931 3375 2.683768 AGGTGGTCTTCAGAGTCAACT 58.316 47.619 0.00 0.00 0.00 3.16
2934 3378 2.103094 CACAAGGTGGTCTTCAGAGTCA 59.897 50.000 0.00 0.00 32.41 3.41
2967 3411 2.681976 GCCTGCCTTGAGAAGCTCATTA 60.682 50.000 0.00 0.00 40.39 1.90
3094 3538 7.606858 AAATGTAGTGTCAAGATGATGAGTG 57.393 36.000 0.00 0.00 0.00 3.51
3323 3767 3.364964 GCAGTTTACAACAAGGGTCATCG 60.365 47.826 0.00 0.00 0.00 3.84
3618 4064 8.254508 AGTACATGAAAAACTGCCTAAAACAAA 58.745 29.630 0.00 0.00 0.00 2.83
3619 4065 7.777095 AGTACATGAAAAACTGCCTAAAACAA 58.223 30.769 0.00 0.00 0.00 2.83
3620 4066 7.341445 AGTACATGAAAAACTGCCTAAAACA 57.659 32.000 0.00 0.00 0.00 2.83
3621 4067 8.539674 CAAAGTACATGAAAAACTGCCTAAAAC 58.460 33.333 0.00 0.00 0.00 2.43
3622 4068 8.470805 TCAAAGTACATGAAAAACTGCCTAAAA 58.529 29.630 0.00 0.00 0.00 1.52
3623 4069 8.001881 TCAAAGTACATGAAAAACTGCCTAAA 57.998 30.769 0.00 0.00 0.00 1.85
3624 4070 7.575414 TCAAAGTACATGAAAAACTGCCTAA 57.425 32.000 0.00 0.00 0.00 2.69
3625 4071 7.759489 ATCAAAGTACATGAAAAACTGCCTA 57.241 32.000 0.00 0.00 0.00 3.93
3626 4072 6.655078 ATCAAAGTACATGAAAAACTGCCT 57.345 33.333 0.00 0.00 0.00 4.75
3627 4073 7.713764 AAATCAAAGTACATGAAAAACTGCC 57.286 32.000 0.00 0.00 0.00 4.85
3628 4074 8.915654 CCTAAATCAAAGTACATGAAAAACTGC 58.084 33.333 0.00 0.00 0.00 4.40
3629 4075 8.915654 GCCTAAATCAAAGTACATGAAAAACTG 58.084 33.333 0.00 0.00 0.00 3.16
3630 4076 8.637986 TGCCTAAATCAAAGTACATGAAAAACT 58.362 29.630 0.00 0.00 0.00 2.66
3631 4077 8.810652 TGCCTAAATCAAAGTACATGAAAAAC 57.189 30.769 0.00 0.00 0.00 2.43
3632 4078 8.637986 ACTGCCTAAATCAAAGTACATGAAAAA 58.362 29.630 0.00 0.00 0.00 1.94
3633 4079 8.177119 ACTGCCTAAATCAAAGTACATGAAAA 57.823 30.769 0.00 0.00 0.00 2.29
3634 4080 7.759489 ACTGCCTAAATCAAAGTACATGAAA 57.241 32.000 0.00 0.00 0.00 2.69
3635 4081 7.759489 AACTGCCTAAATCAAAGTACATGAA 57.241 32.000 0.00 0.00 0.00 2.57
3636 4082 7.759489 AAACTGCCTAAATCAAAGTACATGA 57.241 32.000 0.00 4.14 0.00 3.07
3637 4083 8.816640 AAAAACTGCCTAAATCAAAGTACATG 57.183 30.769 0.00 0.00 0.00 3.21
3638 4084 8.637986 TGAAAAACTGCCTAAATCAAAGTACAT 58.362 29.630 0.00 0.00 0.00 2.29
3639 4085 8.001881 TGAAAAACTGCCTAAATCAAAGTACA 57.998 30.769 0.00 0.00 0.00 2.90
3640 4086 8.915654 CATGAAAAACTGCCTAAATCAAAGTAC 58.084 33.333 0.00 0.00 0.00 2.73
3641 4087 8.637986 ACATGAAAAACTGCCTAAATCAAAGTA 58.362 29.630 0.00 0.00 0.00 2.24
3642 4088 7.500141 ACATGAAAAACTGCCTAAATCAAAGT 58.500 30.769 0.00 0.00 0.00 2.66
3643 4089 7.951530 ACATGAAAAACTGCCTAAATCAAAG 57.048 32.000 0.00 0.00 0.00 2.77
3768 4216 2.894763 TCCGTCGTTCTTTTTCCAGA 57.105 45.000 0.00 0.00 0.00 3.86
3780 4228 2.996249 TACAGACCTCTATCCGTCGT 57.004 50.000 0.00 0.00 34.10 4.34
3789 4237 7.448777 TCAGAGCGATAAAATATACAGACCTCT 59.551 37.037 0.00 0.00 0.00 3.69
3854 4312 7.874016 TCCTTCCAATTTGATCATGAAACAAAG 59.126 33.333 24.63 16.85 37.04 2.77
3899 4357 3.192422 CAGGTTTTGTCACAGTGGTTTCA 59.808 43.478 0.00 0.00 0.00 2.69
3907 4365 3.397482 CTCCTCTCAGGTTTTGTCACAG 58.603 50.000 0.00 0.00 36.53 3.66
3922 4380 3.913163 AGACTTTGAAATGGTCCTCCTCT 59.087 43.478 0.00 0.00 34.23 3.69
3929 4387 8.785329 AAGAGATTCTAGACTTTGAAATGGTC 57.215 34.615 0.00 0.00 0.00 4.02
3966 4424 4.858692 CGTGAAGGCAATCGATTTTTCATT 59.141 37.500 22.25 13.66 0.00 2.57
3978 4436 3.884895 TCCATGTAATCGTGAAGGCAAT 58.115 40.909 0.00 0.00 32.78 3.56
3979 4437 3.342377 TCCATGTAATCGTGAAGGCAA 57.658 42.857 0.00 0.00 32.78 4.52
3994 4452 2.789208 CTGCTACGCAACATTTCCATG 58.211 47.619 0.00 0.00 38.41 3.66
4004 4462 0.392863 ATGTGGATGCTGCTACGCAA 60.393 50.000 0.00 0.00 44.06 4.85
4100 4558 1.339438 GGAGCAACTGATCTGGCAAGA 60.339 52.381 0.00 0.00 36.69 3.02
4103 4561 1.078918 CGGAGCAACTGATCTGGCA 60.079 57.895 4.49 0.00 33.46 4.92
4163 4621 4.208686 GGCTACTGCGACCTCCGG 62.209 72.222 0.00 0.00 40.82 5.14
4169 4627 1.956629 TTAGGCCTGGCTACTGCGAC 61.957 60.000 17.99 0.00 40.82 5.19
4191 4649 0.743097 GATTTCCATGAGCACCAGGC 59.257 55.000 0.00 0.00 45.30 4.85
4205 4663 2.875317 GCTTCCATTCGAGGAGGATTTC 59.125 50.000 6.97 0.00 39.25 2.17
4281 4739 4.056125 GCTCAAAACCCTGGCGGC 62.056 66.667 0.00 0.00 33.26 6.53
4298 4756 1.451387 GGCTTACCACCATGTCGGG 60.451 63.158 2.95 0.00 40.22 5.14


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.