>input_sequence_34525
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-------ATGCTGGCCGTGTTCGACCAGACGGTGGCCAAGTGCCCGGAGGGCCTCCGCAGCCCGCCGGCGGCCGG---TG
CGGCGGC---------GGGGGGCGGAGGCGCGGCCGCGCTGATGAAGGGCTTCGCCGCCGCCAACGACGCCGCGGTCACC
GTCAGCCTCGGCTCCGCCGGCGCCCTCGCCTACTCCTCCGCCAACAAGAACCCCCTCGTCCCCAGGTACTGCTCCGTTAT
CCGCTAGCCTTGCTCAAT----------AACACTACCAGTAAGCCGGTGCTTGTAGTGCTGTCGGGTG------------
---------------------GCGCTTGATCCGGTGACGCGATCGCTTCGCTGGGACTTTG---GAGGTTCCCGTTTGG-
GCCTGCGGAGATCTCCCTTTCTCGTTTGGTTTCTCCGGGCCAGGCCAGCCAGAGATGTAGCTTTCAGCGGCGTGCTGGTT
T---TGGAGCTTTCCGGCGATTTCTAGTCTGTAGTC-GGGGGCTCCGTGGCGTAAATTCTAGGCCAGACTCTTCATCAGA
TCTGCAACATAAGTTATGTGACAGCACCATTATGACGCGTTATTGACTTCTGATTTAATCATTGTTTCGTATATATGTTC
AGATCCTGTCCAAATTAGGAACGGCTTAACTGAGTTAGTTTCCTCCGGCTGCTGAGCAGTTATTTATTTGATCATTTGAG
TAGGCTTGTAGATTGGAGAACCTATTCTGAGCTG----TGCTTAGTGGCACCCAGAGAAACAATCTAGCGAAC-------
-----------------------------------------------------------GCTTAGCTCTAGCCCAAGGTT
GCAAGTACTTCTGAATGTTATGCGCTTAAACAGTCAAAGATCCAGCTTCCCATTGGAGCTGG------------------
CTTGATTCCTGCTGTTC-----------------------TTCTGGGTCCAACCGTGTTATTCAACACCGATGATTTTGC
TCCAGCGTGAAGAGATTCAA-CAATTCTTGTGATGTGAGGAACTGGAGTCTTGCCTGAACCCTTTATGTAG----ATATA
ATATGCCATTA-TTTTTCCTACACTATGTTTT-GCATCCCTGTCTGGC-GATTCGTCATGAAAATGGGAAGTAACATTGA
AGTTTCTGATAC--TGCACATGTCCATCTTACCATTGTCCACAGTTGGATTACGTGTCAATTGATACTTG----TTAATC
AACTGTTATTTGTCAGCCGGCCCACCGGTGATGGTGGTGACTATTGCTCTTTTTTATACGGTACTAGCAACATGTCATGT
GCAACGAACGCGCATACCACTTGGGAGCTGAGCCTCATTAAACTAACGAGCTGAGCCTCATT----------AAACTAAC
TCATAAGTGAAGATCAATTTTTCTTTCGACAGGGAAGCAACTTTTACTTAAC---------------------------T
ATCATGCTTGCTGACAACATACTTGTCAAACCTACTAGCAGTATTGGGCTGCCAAGTTTTGAATAACATAATGAAACATT
GATGTGACTCCAGTAACATCGTTTTGTTGCCTTTGTAGAAAAAAATTCACATGATG--GTGTCTTTTTAGGCATGTATAG
TGATTCCAACAAATAGCAGTAACATGGAATTTCTTTT-CTACCTTATTAGTGATCCTGAGAATTGTTGTTCTATCTGAGT
ATATTGACCTGACT-------CTGTA-TTTTTGTCTTTGCACTTGTATCCAGGATGTTCGGTTCTGTAAATGACATATTT
TGCCTGTTCCAAGGACATGTTGAGAACATTGGCAACCTGAAGCAACACTATGGTCTGAGCAAGACAGCAAATGAGGTTAC
CATCCTGATTGAGGCCTACAGAACCCTCCGGGACAGGGGCCCACTCCCAGCTAGCCAGGTCGTGAGAGATCTCAGTGGAA
GGTTCGCTTTCATCCTCTACGATACCGTGTCGAAATCCACCTTCGTCGCTGCTGTGAGTAGATCATCTCTCTTCTGAAAG
GATGTAAATTTTTAACCCGTAGTTGAATATGGTTTTGAGTTACAACCGCTTTTCTTGAACAGGATGCTGATGGCAGTATC
CCCTTCTTCTGGGGAGTTGACTCTGAAGACCACCTTGTGTTCTCTGACGATAATGAGCTTCTCAAGGCAGGCTGTGGAAA
CTCATTTGCGCCATTCCCCAAAGGTACACTACAAAGAGCAGCGTTGCCACAGTTCACCCTTCTCATCTTTGTTTGTATCC
CTATAATTCAGCTGCGGCACTCATCATCTTGACACTACATTTTCGTTGATCATCAGGCTGCTTCTACACCACATCTGGAG
GGCTGCAGAGCTTCGAGCACCCGCTGAACGAGCTGAAGGCCGTGCCACGTGTGGACAGCCAGGGCCAGATGTGCGGCTCC
ACCTTCAAGGTCGACAGCGAGGCCAAGAAGGACTCGGGGATCCCTCGCGTCGGTAGTGCTGCTGATTGGTCTAACCACTT
CTAG----------------------------------------------------------------------------
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----------------------------------------------------------
>chr5A_1_TraesCS5A01G383200
GAAAAAAAACTGGGTCTTGCGCACCGAAGATTTTTTTTTTGAGCATCGGTACAGACACAAACGCTCATATACACGCGCAT
ACACTCATCCCTATGAACGCACACACGCACACCCTACCCCTATGAGCACCTCCGAAAGACTGAGCCGGCATATCATCTTG
AGATTTACGAAGTCATCGTAGGCGCCTCGTCGTCGACGAGAACGTCTCCTCCCACTGAAAGCGTATCGCCAAAAATCCTG
AAATAAATCCAAAAATAATGCGAGCACCAGGATTTAAACCCTGATGGGTTGGGGATATCACTGTCCACCTAATCAACTCA
ACCATAGGTTGATTCGCTTGCGCACCAAAAATCTGGGGGAGAAAGCACGATCGGAGATGATGTTTTCCACGACGACGCGT
CTGGAAACGTGGACGTCGACCCGTGCTACCTTTG--AAAACGATGGCTCTCCTCTTCCTCTACTCACGGCACCAGAGATG
TATAGATTAGCTCATAGCTGGACGCGCTTAATCTAATCCGATCCGCGGGATACCCGGCAGACCCTCCAGGCTTTCCACGT
CGATAATGACTGGATAAGGTTT----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------CAATCAATCAACCAGAAAAAAATGGATAATACCCCACAGGGACCAGGA
-CGGTTAT-TATTTACCCAAGTTACCAAACTACCCTCGGATACAACCAGATATCTA--AGATAATAAACGGCCAACCTTT
TTGCATTCT-TTGCGATTTTTCCTGGATTTTATATGCTTTATTATTTACACTCCACGTAGG----AAAACGAATGCCGAG
ACATGAAAACCATTGGCGGCCACCAAAAAAGCTCCGCGAATTTCCCACCAACCGACCGACCAAGGGGCAAAACGGGAAAC
CGAGCGCCCTATATCAGTTGACTTGCGGTGGCCATTCAGCGTCGCCGTGAGATCG----CACCGCGGCACGCAGACAAAG
GAGACGGGGACAGCACAGCCTCAGCGCACGGAAAGAGAGGGGGGAGAGATTCGCACGT----------------------
CGCCGAGATGCTGGCCGTGTTCGACCAGACGGTGGCCAAGTGCCCGGAGGGCCTCCGCAGCCCGCCGGCGGCCGG---TG
CGGCGGC---------GGGGGGCGGAGGCGCGGCCGCGCTGATGAAGGGCTTCGCCGCCGCCAACGACGCCGCGGTCACC
GTCAGCCTCGGCTCCGCCGGCGCCCTCGCCTACTCCTCCGCCAACAAGAACCCCCTCGTCCCCAGGTACTGCTCCGTTAT
CCGCTAGCCTTGCTCAAT----------AACACTACCAGTAAGCCGGTGCTTGTAGTGCTGTCGGGTG------------
---------------------GCGCTTGATCCGGTGACGCGATCGCTTCGCTGGGACTTTG---GAGGTTCCCGTTTGG-
GCCTGCGGAGATCTCCCTTTCTCGTTTGGTTTCTCCGGGCCAGGCCAGCCAGAGATGTAGCTTTCAGCGGCGTGCTGGTT
T---TGGAGCTTTCCGGCGATTTCTAGTCTGTAGTC-GGGGGCTCCGTGGCGTAAATTCTAGGCCAGACTCTTCATCAGA
TCTGCAACATAAGTTATGTGACAGCACCATTATGACGCGTTATTGACTTCTGATTTAATCATTGTTTCGTATATATGTTC
AGATCCTGTCCAAATTAGGAACGGCTTAACTGAGTTAGTTTCCTCCGGCTGCTGAGCAGTTATTTATTTGATCATTTGAG
TAGGCTTGTAGATTGGAGAACCTATTCTGAGCTG----TGCTTAGTGGCACCCAGAGAAACAATCTAGCGAAC-------
-----------------------------------------------------------GCTTAGCTCTAGCCCAAGGTT
GCAAGTACTTCTGAATGTTATGCGCTTAAACAGTCAAAGATCCAGCTTCCCATTGGAGCTGG------------------
CTTGATTCCTGCTGTTC-----------------------TTCTGGGTCCAACCGTGTTATTCAACACCGATGATTTTGC
TCCAGCGTGAAGAGATTCAA-CAATTCTTGTGATGTGAGGAACTGGAGTCTTGCCTGAACCCTTTATGTAG----ATATA
ATATGCCATTA-TTTTTCCTACACTATGTTTT-GCATCCCTGTCTGGC-GATTCGTCATGAAAATGGGAAGTAACATTGA
AGTTTCTGATAC--TGCACATGTCCATCTTACCATTGTCCACAGTTGGATTACGTGTCAATTGATACTTG----TTAATC
AACTGTTATTTGTCAGCCGGCCCACCGGTGATGGTGGTGACTATTGCTCTTTTTTATACGGTACTAGCAACATGTCATGT
GCAACGAACGCGCATACCACTTGGGAGCTGAGCCTCATTAAACTAACGAGCTGAGCCTCATT----------AAACTAAC
TCATAAGTGAAGATCAATTTTTCTTTCGACAGGGAAGCAACTTTTACTTAAC---------------------------T
ATCATGCTTGCTGACAACATACTTGTCAAACCTACTAGCAGTATTGGGCTGCCAAGTTTTGAATAACATAATGAAACATT
GATGTGACTCCAGTAACATCGTTTTGTTGCCTTTGTAGAAAAAAATTCACATGATG--GTGTCTTTTTAGGCATGTATAG
TGATTCCAACAAATAGCAGTAACATGGAATTTCTTTT-CTACCTTATTAGTGATCCTGAGAATTGTTGTTCTATCTGAGT
ATATTGACCTGACT-------CTGTA-TTTTTGTCTTTGCACTTGTATCCAGGATGTTCGGTTCTGTAAATGACATATTT
TGCCTGTTCCAAGGACATGTTGAGAACATTGGCAACCTGAAGCAACACTATGGTCTGAGCAAGACAGCAAATGAGGTTAC
CATCCTGATTGAGGCCTACAGAACCCTCCGGGACAGGGGCCCACTCCCAGCTAGCCAGGTCGTGAGAGATCTCAGTGGAA
GGTTCGCTTTCATCCTCTACGATACCGTGTCGAAATCCACCTTCGTCGCTGCTGTGAGTAGATCATCTCTCTTCTGAAAG
GATGTAAATTTTTAACCCGTAGTTGAATATGGTTTTGAGTTACAACCGCTTTTCTTGAACAGGATGCTGATGGCAGTATC
CCCTTCTTCTGGGGAGTTGACTCTGAAGACCACCTTGTGTTCTCTGACGATAATGAGCTTCTCAAGGCAGGCTGTGGAAA
CTCATTTGCGCCATTCCCCAAAGGTACACTACAAAGAGCAGCGTTGCCACAGTTCACCCTTCTCATCTTTGTTTGTATCC
CTATAATTCAGCTGCGGCACTCATCATCTTGACACTACATTTTCGTTGATCATCAGGCTGCTTCTACACCACATCTGGAG
GGCTGCAGAGCTTCGAGCACCCGCTGAACGAGCTGAAGGCCGTGCCACGTGTGGACAGCCAGGGCCAGATGTGCGGCTCC
ACCTTCAAGGTCGACAGCGAGGCCAAGAAGGACTCGGGGATCCCTCGCGTCGGTAGTGCTGCTGATTGGTCTAACCACTT
CTAGCTCGATGACCCTTGTTGTAAACTGCCAATCTTGACACTGAATCGCTGAGACACCGCACTGCATCTGCATTTTATTT
TTGAGCAGTTTACAACGCTCTAGACAATGCTGTTTCAATAAATGTACTGTCTGATGGGTAATGATACTGCTGTAAGTTTA
CCGATACTCGAAGAAACTCTGATGCCACCACCTGGTGGTAGAGGTTTATCAGCCCCCC-TATATATGTCTCAATAAATAA
AGTTCAGTGAAGGCTTAGTTTG-TTTGTCTTTTGTATCGTGTTACTAGCTTGCAGCTAGTGTTTTTGTTTTAGGCAGTTT
TTCATGTACTTTGATTTAGGCAGT--TTTTCATGTACTTTATGTTGTACAGTAAGGCTCCGCTTGGTATGGGTGTAACAT
TTTACATCCGTATTTACTTTACAGGTGTATTTCACAGGCCACAACGTGATTTCCGTCTGGAAAAAGAACGACGGATAGAG
GTCTGTATATTT----------TATCGCTCTGAAACGATGATCCAATCAGGGTGTAAATGATTTCCATCCACTTTGTTTC
ATGATCAAATTGGAAGGAACAGACATATTATCATTCTGAAACCACTGTGACAAAACCTGAGAGGAGGACCATTTCAAAGT
CTAGAATCTCTTTTGGACTCCACAATGAAAAATCGATTGCCTTCACGATTACATGGAAATGTTGCGTAGCAGCATCCACA
TAGACTAGACCAAGTACTTGTATATAGTATAAATAAACGACCAATTCCTAAATAGAACAGTAGGTCTTGAGGATCCTTCT
TGCCAGATCAGTTGCTCCGCTTTCCTTGTAGATCAGATGCAGATTGAACGCAGCCTCTCTCCGGAGGTCGCAGTAGCCAG
GCCTAAGAGCCTGGTGCTCATGGAAATCCTCCTCGAATGGAAGCTTGGGTATGGGGTGATCTTCCACCTCCATGGCTAAA
ACCTTCTCGTAGTAGATGGCCGCCAGGGTTTTGAGCCCGACATGGTGGTAAGCCCGGG
>chr5D_344
ACCAAAGATCC---------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------GGGGGATGAAGCACGATCGGAGATGATGTTTTCCACGACAACGCAT
CTGGAAATGTGGAGGTCGGCCCGTGCTCGCTTTGAAAAAACGATGGCTCTCCTCT-CCTCTACTCATGCCACCAGAGATA
GATAGATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAATCAATCAACCAGAAAAAAATGGATAAGACCCCACAGGGACTAGGA
CAGTTATTATATGTACCCAAATTACCAAACTACCCTCGGACACAGCAAGATAATCTACAGATAATAAACGGCCAAC-TTT
TTGCATCCC-CTGCGATTTTTTCTGGATTTTATACGGTTTATT---TATACTCCACGTAGAGAAAAAAACGGATACCGAG
ACACGAAAACCATTGGCGGCCACGAGAAAAGCCCCGGGAATTTCCCACCAACCGACCGACCAAGGGGCAAAACGGGAAAC
CGAGCGCCCTATATCAGTTGACTTGCGGTGGCCATTCAGCGTCGCCGTGAGATCGATCACACCGCAGCACGCAGACAAAG
CAGACGGGGACAGCACAGCCTCAGCGCACGGAAAGAGAGGA-----------GAGATCGGAGAGGTGACCAC---CGCCG
CGCCGAGATGCTGGCCGTGTTCGACCAGACGGTGGCCAAGTGCCCGGAGGGCCTCCGCAGCCCGCCGGCGGCCGGAGGTG
CGGCGGC---------AGGGGGCGGCGGCGCGGCCGCGCTCATGAAGGGCTTCGCCGCCGCCAACGACGCCGCGGTCACC
GTCAGCCTCGGCGCCGCCGGCGCCCTCGCCTACTCCTCGGCCAACAAGAACCCCCTCGTCCCCAGGTACGGCTCCGTTAT
CCGCTAGTCTTGCTCAAT----------AATACCACGAGTAAGCCGGTGCCTGTAGTGCTGTCGGGTGATGCGAAAGCTG
CGCCGTGTTGACGCCTTCACTGCGCTTGATCCGGTGATGTGATCGCTTCGCTGGGACTTTG---GAGGTTCCCGTTTGGA
GCCTGCGGAGATCTCCCTTTCTCGTTTGGTTTCTCCGGGCCAGGCCAGCCACAGATGTAGCTTTCAGTGGCGTGCTGGTT
T---TGGAGCTTTCCGGCGATTTCTAGTCTGTAGTT-GGGGGCTCCGCAGCGTAAATTCTAGGCCAGACTCTTCTTCAGA
TCTGCAACATAAGTTATGTGACAGCACCATTATGACGGGTTGTTGA------ATTTAATCATTGTTTCGT--ATATGTTC
AGATCCTGTCCAAATTAGGAACGGCTTAACTGGAGTAGTAGTCC------------------TTTATTTGATCGTTTTAG
TAGGCTCGTAGATTGGGGAACCTGTTCATAGCTGGGCTTGCTTAGTGGCACCCAGAGAAACAATTTAGCGAAATGCATCA
TTCCAGTTAGAGAGAAGGCATAGGATCGTCGCATCATGTACTGAAATTTTGCTGTGGCGGCTTACCTCTAGCCCAAGGTT
GTGAATATTTCTGAATGTTGTGCGTTTAAACAGTC-AAGATCCAGCTTACCATTCGAGCTGTTGAGACTGATACTTTTGT
CTTGATTCCTGCTGTTCAAAGTTGAAACTTCACACTGGTATTCTGGGTCCAATCATGTTATCCAACACCGATGATTTTGA
TCCAGCGTGAAGAGATTCAAACAAATCTCGTGATGTGAGGAGGTGGAGTCTTGCCTGAACCCTTTATGTAG----ATATA
ATATGCCATATTTTTTCCCTACACTATGTTTTTGCATCCGTGTCTTAAAGATTCGTCATGAAGAAGGGAAGTAACATTGA
AGTTTCTGATACAATGCACATGTCCATCTTACC---------------------------TTGATACTTGTTAATTAATC
AACTGTTCCTTGTCA----GCCCACCGGTGATGGTGGTGACTATTGCTCTTTTTTATTCGA---TAGCAACATGTCATGT
GCAACGAACACGCATACCACTCGGGAGCTGCCCCCCATTATAAACTAACTCATAAGTGAAGATGATAGC--AAAAAATAC
TCATAAGTGAAGAACAATTTTTCTTTCGATAGGGAAGCAACTTTTACTTTTTTTT-----CGATAACTTTTAACTTAAAT
ATCATGCTTGCTGACAACATACTTGTCAAACCTATCAGGAGTATTGGGCTGCCAAC--TTGAATAACATAATGAA-CATT
GATGTGACTCAAGTAACATTGTTTTGTTGCTTTTGAAGAAAATGTTTCACATGATAGTGTGTCTATTTAGGCATGTG--G
TAATTCCAACAAATAGCAGTAACGTGGATTATTTTTTTCTAACCGACTAGTGCTCCTGAGAATTATTTTTCTACCTGGTT
ACCTGAATTGTGTTAACCTGACTCTA-TTTTTGGCTTTGTGCTCGTATCCAGGATGTTTGGTTCTGTGAATGACATATTT
TGCCTGTTCCAAGGACATGTTGAGAACATTGGCAACCTGAAGCAACACTATGGTCTGAGCAAGACAGCAAATGAAGTTAC
CATCCTGATTGAGGCCTACAGAACCCTCCGGGACAGGGGCCCGCTCCCAGCCAGCCAGGTCGTGAGAGATCTCAGTGGAA
GGTTCGCTTTCATCCTGTACGACACTGTGTCGAAATCCACCTTCGTCGCTGCTGTGAGTAGATCATCTCTCTTCTCAAAG
GATGTAAAATTTTAACCTGTAGTTGAATATGGTTTTGAGTTGCAACCGCTTTTCTTGAACAGGATGCTGATGGCAGTATC
CCCTTCTTCTGGGGCGTCGACTCTGAAGACCACCTTGTGTTCTCTGACGACAATGAGCTTCTCAAGGCAGGCTGTGGAAA
CTCATTCGCGCCATTCCCCAAAGGTACACTACAAAGAGCAGCGTTGCCACACTTCACCCATCTCATCTTTGTTTGTATCC
CTATAATTCAGCTGCGGTACTCATCATCTTGACACTGCATTTTCGTTGATCATCAGGCTGCTTCTACACCACATCTGGAG
GGCTGCAGAGCTTCGAGCACCCGCTGAACGAGCTGAAGGCCGTGCCACGTGTGGACAGCCAGGGCCAGATGTGCGGCTCC
ACCTTCAAGGTCGACAGCGAGGCCAAGAAGGACTCGGGGATCCCTCGCGTCGGTAGTGCTGCTGATTGGTCTAACCACTT
CTAGCTTGATGACCCTTGTTGTAAACTGCCAATCTTGACACTGAATCGCTGAGACACC-----------GCATTTTATTT
TTGAGCAGTTTACAACGCTCTAGACAATGCTGTTTCAATAAATGTACTGTCTGATGGGTAATGATACTGCTGTAAGTTTA
CCGATACTCGAAGAAACTCTGATGCCACCACCTGGTGGTAGAGATTTATCAGTCCCCCCTATATATGTCTCAATAAATAA
AGTTCAGTGAAGGCTTAGTTTGTTTTGTCTTTTGTATCGTGTTACTAGCTTGTAGCTAGTGTT-----------------
---------TTTGCTTCAGGCAGT--TTTTCATGTACTCTATGTTGTACAGTAAGGCTCCGCTTGGTATGGGTGTAACAT
TTTACATCCGTAATTACTTTGCAGGTGTATTTCACAGGCCACAATGTGATTTCCGCCTGGAAAAAGATCGACGGATGGAG
GTCTGTATATTTTACAAGTGTATATCGCTCTGAAACGATGATCCAATCAGGGTGTAAATGATTTCCATCCATTTTGTTTC
ATGATCAAATTGGAAGAAACAGGCATATTATCATTCCAAAACCAGTGTGACAAAACCTGGGAGGAGAACCATTTCAAAGT
CTAGAATCTCTTTTGGACTCCACTATGAAAAATCGCCTGCCTTCACGATTATATGGAAATGCTGCGTAGCAGTATCCACA
TAGACAGGGCCAAGTAGTTGTATATAGTATAAATAAACGACCAATTCCTAAATAGAACAGTAGGTCTTGAGGATCCTCCT
CGCCAGATCAGTTGCTCCGCTTTCCTTGTAGATCAGATGCAGATTGAATGCAGCCTCTCTTCGGAGATCGCAGTAGCCAG
GCCTGAAATCCTGGTGCTCATGTAAA---TCCTCGAATGGAAGCTTAGGTATGGGGTGATCTTCCACCTCCATGGCTAAA
ACCTTCTCGTAGTAGATGACCGCCAGGGTTTTGAGGCCGACATGGTGGTACGCCCGGG
>chr5B_582
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---------------------------------AATCAATCAACCAGAAAAAAAACGGATAAGA-CCTCTGGGACTAGGA
CCGGTTAT-TATTTACCCAAGTTACCAAACTACCCTCGGATACAACCAGATAATCTACAGATAATAAACGGCCCAC-ATT
TTTGCATTCTCTGCGATTTTTCCTGGATTTTCTACGGTTTATT---TACGATCCACGTAGTAGAGACCAACAGCAGGATA
CA--GAAAACCATTGGCGGCCACAAGAAAAGCCCTGGGAATCTCCCACCAACCGACCGACCAAGGGGCAAAACGGGAAAC
CGAGCCCCCTATATCTGTTGACTTGCGGTGGCCATTCAGCGTCGCCGAGA----GATCACACCGCAGCACGCAGACAAAG
CAGACGGGGACAGCA-----------CACGGAAAGAGAGGAGAGAGGGGAGAGAGATCGGAGAGGTGACCACCACCGCCG
CGCCGAGATGCTGGCCGTGTTCGACCAGACGGTGGCCAAGTGCCCGGAGGGCCTCCGCAGCCCGCCGGCGGCCGGGGGAG
GGGGTACGGCGGCAGGAGGGGGCGGAGGCGCGGCCGCGCTCATGAAGGGCTTCGCCGACGCCAACGACGCCGCGGTCACC
GTCAGCCTCGGCGCCGCCGGCGCCCTCGCCTACTCCTCGGCCAACAAGAACCCCCTCGTCCCCAGGTACGGCTCCGTTAT
CCGCCAGCCTTGCTCAATAATACTGTACAATACTACGAGTAAGCCGGCGCTTGCAGTGCTGTCGGGTGACGCGAAAGCTG
CGCCGTGTTCACGCCTTCACGGCGCTTGATCCGGCGACGCGATCGCTTCGCCGGGACTTTGTTGGAGGTTCCCGTTTGGA
GCCTGCGGAGATCTCCCTTTCTCGTCTGGTTTCTCCGGGCCAGCCCAGCTAGAGACGTAGCTTTCAGTGCCGTGCTGGTT
TGGGTGGAGCTTTCCGGCGATTTCTGGTCTATAGTTGGGGGGCTCCGCAGCGTGAATTCTAGGCCAGACTCTCCATCAGA
TCTGCAACATAAGTTATGTGACATCACCATTATGACGAG----------------------------------TATGTTC
AGATCCTGTCCATATTACCATTACCATTA---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------GCGTTTAAACAGTC-AAGATCCAGCTTACCATTTGAGCTGTTGAGACTGATTTTCTTGT
CTTGATTCCTGCTGTTCAAAGTTGAAACTTCACACTGGTATCCTGGGTCCAATCATGTTATCCAACACCGATGATTTTGA
TCCAGCGTGAAGAGATTCAAACAAATCTCGTGATGTGAGGAGCTGGAGTCTTGCCTGAACCCTTTATGTATAGATATATA
ATATGCCATATTTTTTCCCTACACTATGTTTT-GCGTCCGTGTCC-AAAGATTCGTCATGAAGAAGGGAAGTAACATTGA
AGTTTCTGATACAATGCACATGTCCATCTTACC---------------------------TTGATACTCGTTAATTAATC
AATTGTTCCTTGTCAGCCAGCCCACCGGTGATGGTGGTGACTATTGCTCTTTTTTATTCGA---TAGCAACATGTCATGT
GCAACGAACGCGCATACCACTCGGGAGCTGCCCCCCATTATAAACTAACTCATAAGTGAAGATGATAGCAAAAAAAAAAG
TCACAAGTGAAGATCAATTTTTCTTTCGATAGG-AAGCAACTTTTACTTATTCTTTTTTGCGATAAATTTTTACTTAAAG
ATCATGTTTGCTGACAACATACTTGTCAAACCTATTAGGAGTATTGGGCTGCCAAC--TTGAATAGCATAATGAA-CATT
GATGTGACTCAAGTAACATCGTTTTGTTGCTTTTGAAGAAAATGTTTCACATGATAGTGTGTCTATTTAGGCATGTG--G
TAATTCCAACAAATAGCAGTAACGTGGATTTTTTTTTTCTAACCGACTAGTGCTCCTGAGAATTATTTTCCTATCTGATT
CT-TGAAATATGTTAACCTGACTCCGGTTTTTGTCTTTGCGCTCGTATCCAGGATGTTTGGTTCTGTGAACGACATATTT
TGCCTGTTCCAAGGGCATGTTGAGAACATTGGCAACCTGAAGCAACACTATGGTCTGAGCAAGACAGCAAATGAGGTTAC
CATCCTGATTGAGGCCTACAGAACCCTCCGGGACAGGGGCCCGCTCCCAGCCAGCCAGGTCGTGAGAGATCTCAGTGGAA
GGTTCGCTTTTATCCTGTACGACACCGTGTCGAAATCCACCTTCGTCGCTGCTGTGAGTAGATCATCTCTCTTCTGAAAG
GATGTAAATTCTTAACCTGTAGTTGAATATGGTTTTGAGTTGCAACCGCTTTTCTTGAACAGGATGCTGATGGCAGTATC
CCCTTCTTCTGGGGCGTCGACTCTGAAGACCACCTTGTGTTCTCTGACGACAATGAGCTTCTCAAGGCAGGCTGTGGAAA
CTCATTTGCGCCATTCCCCAAAGGTACACCACAAAGAGCAGCGTTGCCACGGTTCACCCATGTCATCTTTGTTTGTATCC
CTATAATTCGGGTGAGGTACTCATCATCTTGACACTACATTTTCGTTGTTCATCAGGCTGCTTCTACACCACATCTGGAG
GGCTGCAGAGCTTCGAGCACCCGCTGAACGAGCTGAAGGCCGTGCCACGTGTGGACAGCCAGGGCCAGATGTGCGGCTCC
ACCTTCAAGGTCGACAGCGAGGCCAAGAAGGACTCGGGGATCCCTCGCGTCGGTAGTGCTGCTGATTGGTCTAACCACTA
CTAGCTTGATGACCCTTGTTGTAAACTGCCAATCTTGACACTGAATCGCTGAGACACCGCACTGCATCTGCATTTTATTT
TTGAGCAGTTTACGACGCTCTAGACAATGCTGTTTCAATAAATGTACTGTCTGATGGGTAATGATACTGCTGTAAGTTTA
CCGATACTCGAACAAACTCTGATGCCACCACCTGGTGGTAGAGGTTTATCAGCCACCC-TATATATGTCTCGATAAATAA
AGTTCAGTGAAGGCTTAGTTTGTTTTGTCTTTTGTATCATGTTACTAGCTTGCAGCTAGTGTT-----------------
---------TTTGTTTTAGGCAGTTCTTTTCATGTACTTTATGTTGTACAGTAA--------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------ATGATTTGCATCCATTTTGTTTC
ATGATCAAATTGGAAGAAACAGACATATTATCATTCCGAAACCAGTGTGACAAAACCTGGGAGGAGAACCATTTCAAAGT
CTAGAATCTCTTTTGGACTCCACTATGAAAAATCGCCTGCCTTCACGATTATATGGAAATGCTGAGCAGCAGCAACCACA
TAGACAGGGCCAAGTACTTGTATATAGTATAGATAAACAACCAATTCCTAAATAGAACAGTAGGTCTTGAGGATCCTCCT
CGCCAGATCAGTTGCTCCGCTTTCCTTGTAGATCAGATGCAGATTGAACGCAGCCTCTCTTCGGAGATCGCAGTAGCCAG
GCCTGAAATCCTGGTGCTCCTGTAAATCCTCCTCGAATGGAAGCTTGGGTATGGGGTGATCTTCCACCTCCATGGCTAAA
ACCTTCTCGTAGTAGATGACCGCCAGGGTTTTGAGGCCGACATGGTGGTACGCCCGGG
>SNPs
SSS---S-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------SS-------------------------------S----S-
-------S-----S----S--------SS--------------------------S----------S-S----------S
S-------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSS----------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------S-------------S----
----------------------------------------------------SSSS--------------------S---
--------S-S-----------------------S-S------SSS--------------S-------------S-----
---S-------------------S-S------S---S-------------------------------------------
-----------------------------------------------------------------S--------------
S---------------------------------------S-S---S-SSSS-SSSSS----------------------
--------------------------------------------------------------------------------
----------------S-----------------------S---------------------------------------
------------S-------------------------S------------------------------S----------
------------------------------S-----S-------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------S------------
-----------------------------------S-----------SS-------------------------------
-------------------------------------S---S----SSSSSS------------------SS--------
--------------------------------SSS----SSS-SSSSSSSSSSSSSSSSSSS-----------S---S--
------S---------S------S---SS-----------------------------------S-------S-------
----------------------------------------------------------------S---------------
-SS-S--S-----------S----S----------S------------S-----S------S------------------
----------------------------------------------------S-S------S-----------------S
------------------------S---S------------S--------------------------------------
---------SS-----S----------------------S-----SSS--------------S-S---------------
---------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSS--------------------
-------SS---------S--------------------------------------S--SSSS----------------
---------------------S--------SS--S-----S-SSSSSSSS-SS-SSSSS-SS-------------SS---
-----------------------------S--------------------SS----------------------------
----------------------------------S---S----------------SSS-----------------S----
----------S-------------------S----S------SSS----------S--------S-----------SSS-
-S---------------------S----S---S--------S-SS-S-----S-----------S--S----------S-
--S-SS-SSSSSS----------S----------------S--S--------------S--------S------------
--------------------------------------------------------------------------------
------------------------------------------S--------S----------------------------
----------------S-----S---------------------------------------------------------
-----------------S-----------------------S--------------------------------------
--------------S--S--------------------------------S-----------------------------
-----------------------------------------------------------S--------------------
-----------------S--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------S-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------SSSSSSSSSSSSSSSSS
SSSSSSSSS----S------------------------------------------------------------------
------------S-------S-----------------------S----------S-----------S--------S---
-----------------------------------------------------------------------S--------
----------------S-------------------S-------S--------------S------S-------------
-----------------------S-----------SS--------------S---------S------------------
-----SS-S--------------------------------------------------------------------S--
S-----------------------------------------------------------S-----S-------------
----S-S-S-------------S---------------------------------------------------------
------------------S----------------S--------------S-------
>forward_510
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----------CTCATAGCTGGACGCGCTTA--------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------
>reverse_1993
--------------------------------------------------------------------------------
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------------------------------------------------------------------------CGCTTAGC
TCTAGCCCAAGG--------------------------------------------------------------------
--------------------------------------------------------------------------------
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>forward_1892
--------------------------------------------------------------------------------
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--------------------------------AGTTAGTTTCCTCCGGCTGC----------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------
>reverse_3172
--------------------------------------------------------------------------------
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---------------------------------------------------TAGCCAGGTCGTGAGAGATCT--------
--------------------------------------------------------------------------------
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----------------------------------------------------------
>forward_1894
--------------------------------------------------------------------------------
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----------------------------------TTAGTTTCCTCCGGCTGCTG--------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------
>reverse_3223
--------------------------------------------------------------------------------
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----------------------TACCGTGTCGAAATCCACCT--------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------
>forward_2215
--------------------------------------------------------------------------------
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-----------------------------------TGTTCTTCTGGGTCCAACCG-------------------------
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>reverse_3322
--------------------------------------------------------------------------------
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-----------------------------------------ACAACCGCTTTTCTTGAACAGG-----------------
--------------------------------------------------------------------------------
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----------------------------------------------------------
>forward_2368
--------------------------------------------------------------------------------
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----------------------------GTTTTGCATCCCTGTCTGGC--------------------------------
--------------------------------------------------------------------------------
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>reverse_3378
--------------------------------------------------------------------------------
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-----------------TGACTCTGAAGACCACCTTGTG-----------------------------------------
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----------------------------------------------------------
>forward_2591
--------------------------------------------------------------------------------
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-----------GCATACCACTTGGGAGCTGA-------------------------------------------------
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----------------------------------------------------------
>reverse_4462
--------------------------------------------------------------------------------
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-------------------------------------------------------------TTGCGTAGCAGCATCCACA
T-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------
