Multiple sequence alignment - TraesCS5A01G374600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G374600 chr5A 100.000 3466 0 0 1 3466 572866443 572862978 0.000000e+00 6401.0
1 TraesCS5A01G374600 chr5A 98.268 635 10 1 2833 3466 572856639 572856005 0.000000e+00 1110.0
2 TraesCS5A01G374600 chr5A 97.953 635 12 1 2833 3466 648237854 648237220 0.000000e+00 1099.0
3 TraesCS5A01G374600 chr5D 93.465 2020 57 15 690 2656 453826908 453824911 0.000000e+00 2929.0
4 TraesCS5A01G374600 chr5B 94.748 1847 60 8 690 2514 554524504 554522673 0.000000e+00 2839.0
5 TraesCS5A01G374600 chr2A 98.270 636 9 2 2833 3466 673537720 673538355 0.000000e+00 1112.0
6 TraesCS5A01G374600 chr2A 97.956 636 12 1 2832 3466 755956875 755957510 0.000000e+00 1101.0
7 TraesCS5A01G374600 chr2A 97.953 635 12 1 2833 3466 755934815 755935449 0.000000e+00 1099.0
8 TraesCS5A01G374600 chr6A 97.959 637 11 2 2832 3466 603006054 603006690 0.000000e+00 1103.0
9 TraesCS5A01G374600 chr6A 97.953 635 12 1 2833 3466 504180095 504180729 0.000000e+00 1099.0
10 TraesCS5A01G374600 chr1A 98.104 633 11 1 2835 3466 486347155 486347787 0.000000e+00 1101.0
11 TraesCS5A01G374600 chr1A 97.368 646 13 3 2825 3466 483691236 483690591 0.000000e+00 1096.0
12 TraesCS5A01G374600 chr7D 92.256 297 21 2 354 649 316400570 316400865 1.490000e-113 420.0
13 TraesCS5A01G374600 chr7D 89.206 315 23 5 1 305 316400031 316400344 1.950000e-102 383.0
14 TraesCS5A01G374600 chr3A 88.077 260 21 6 91 348 745894602 745894351 2.020000e-77 300.0
15 TraesCS5A01G374600 chr1D 88.889 198 18 4 75 269 42130990 42130794 1.240000e-59 241.0
16 TraesCS5A01G374600 chr3B 92.727 165 11 1 485 649 755052278 755052115 1.610000e-58 237.0
17 TraesCS5A01G374600 chr4A 100.000 28 0 0 2732 2759 596827559 596827586 6.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G374600 chr5A 572862978 572866443 3465 True 6401.0 6401 100.000 1 3466 1 chr5A.!!$R2 3465
1 TraesCS5A01G374600 chr5A 572856005 572856639 634 True 1110.0 1110 98.268 2833 3466 1 chr5A.!!$R1 633
2 TraesCS5A01G374600 chr5A 648237220 648237854 634 True 1099.0 1099 97.953 2833 3466 1 chr5A.!!$R3 633
3 TraesCS5A01G374600 chr5D 453824911 453826908 1997 True 2929.0 2929 93.465 690 2656 1 chr5D.!!$R1 1966
4 TraesCS5A01G374600 chr5B 554522673 554524504 1831 True 2839.0 2839 94.748 690 2514 1 chr5B.!!$R1 1824
5 TraesCS5A01G374600 chr2A 673537720 673538355 635 False 1112.0 1112 98.270 2833 3466 1 chr2A.!!$F1 633
6 TraesCS5A01G374600 chr2A 755956875 755957510 635 False 1101.0 1101 97.956 2832 3466 1 chr2A.!!$F3 634
7 TraesCS5A01G374600 chr2A 755934815 755935449 634 False 1099.0 1099 97.953 2833 3466 1 chr2A.!!$F2 633
8 TraesCS5A01G374600 chr6A 603006054 603006690 636 False 1103.0 1103 97.959 2832 3466 1 chr6A.!!$F2 634
9 TraesCS5A01G374600 chr6A 504180095 504180729 634 False 1099.0 1099 97.953 2833 3466 1 chr6A.!!$F1 633
10 TraesCS5A01G374600 chr1A 486347155 486347787 632 False 1101.0 1101 98.104 2835 3466 1 chr1A.!!$F1 631
11 TraesCS5A01G374600 chr1A 483690591 483691236 645 True 1096.0 1096 97.368 2825 3466 1 chr1A.!!$R1 641
12 TraesCS5A01G374600 chr7D 316400031 316400865 834 False 401.5 420 90.731 1 649 2 chr7D.!!$F1 648

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
474 485 0.025128 GAAAACGATTCGCGAGCTCC 59.975 55.0 9.59 0.0 44.57 4.70 F
576 587 0.035439 TCCTTTCTCGCCCATGAACC 60.035 55.0 0.00 0.0 0.00 3.62 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1874 1982 1.265236 ACACCAGCTCCTTCAGAGAG 58.735 55.0 0.00 0.0 46.50 3.20 R
2533 2695 1.014352 GGAACGTTCATCCAATCGGG 58.986 55.0 28.24 0.0 36.92 5.14 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
38 39 2.015736 ATAGAAGGTGCTGCGTCAAG 57.984 50.000 0.00 0.00 0.00 3.02
53 54 3.463944 CGTCAAGTTTGTACTCCCTGTT 58.536 45.455 0.00 0.00 31.99 3.16
58 59 4.347360 AGTTTGTACTCCCTGTTACCAC 57.653 45.455 0.00 0.00 0.00 4.16
70 71 4.315803 CCTGTTACCACGAAATCTTCTGT 58.684 43.478 0.00 0.00 0.00 3.41
76 77 2.932614 CCACGAAATCTTCTGTAGCAGG 59.067 50.000 0.00 0.00 31.51 4.85
79 80 5.451937 CCACGAAATCTTCTGTAGCAGGATA 60.452 44.000 0.00 0.00 31.51 2.59
86 96 7.716799 ATCTTCTGTAGCAGGATAGGATTAG 57.283 40.000 0.00 0.00 31.51 1.73
93 103 3.134458 GCAGGATAGGATTAGTGCACAC 58.866 50.000 21.04 7.18 0.00 3.82
97 107 4.345257 AGGATAGGATTAGTGCACACGAAT 59.655 41.667 21.04 14.84 38.93 3.34
111 121 4.043750 CACACGAATTTGCAACAGAACAT 58.956 39.130 0.00 0.00 0.00 2.71
142 152 1.665916 AGTACACAGCAGCACGCAG 60.666 57.895 0.00 0.00 46.13 5.18
197 208 2.032054 CACCACGCATCCATTCATACAC 59.968 50.000 0.00 0.00 0.00 2.90
208 219 3.616821 CCATTCATACACGGTACACACAG 59.383 47.826 0.00 0.00 0.00 3.66
213 224 0.108089 ACACGGTACACACAGCACAA 60.108 50.000 0.00 0.00 0.00 3.33
214 225 1.010580 CACGGTACACACAGCACAAA 58.989 50.000 0.00 0.00 0.00 2.83
215 226 1.011333 ACGGTACACACAGCACAAAC 58.989 50.000 0.00 0.00 0.00 2.93
216 227 0.042535 CGGTACACACAGCACAAACG 60.043 55.000 0.00 0.00 0.00 3.60
217 228 1.292061 GGTACACACAGCACAAACGA 58.708 50.000 0.00 0.00 0.00 3.85
218 229 1.004292 GGTACACACAGCACAAACGAC 60.004 52.381 0.00 0.00 0.00 4.34
219 230 0.924777 TACACACAGCACAAACGACG 59.075 50.000 0.00 0.00 0.00 5.12
220 231 1.651132 CACACAGCACAAACGACGC 60.651 57.895 0.00 0.00 0.00 5.19
221 232 2.052237 CACAGCACAAACGACGCC 60.052 61.111 0.00 0.00 0.00 5.68
222 233 3.276846 ACAGCACAAACGACGCCC 61.277 61.111 0.00 0.00 0.00 6.13
223 234 2.972505 CAGCACAAACGACGCCCT 60.973 61.111 0.00 0.00 0.00 5.19
224 235 2.665185 AGCACAAACGACGCCCTC 60.665 61.111 0.00 0.00 0.00 4.30
235 246 3.181967 CGCCCTCGTCAAGCTTCG 61.182 66.667 0.00 0.00 0.00 3.79
236 247 2.815647 GCCCTCGTCAAGCTTCGG 60.816 66.667 7.60 0.00 0.00 4.30
237 248 2.657237 CCCTCGTCAAGCTTCGGT 59.343 61.111 7.60 0.00 0.00 4.69
238 249 1.446272 CCCTCGTCAAGCTTCGGTC 60.446 63.158 7.60 0.00 0.00 4.79
239 250 1.801913 CCTCGTCAAGCTTCGGTCG 60.802 63.158 7.60 2.91 0.00 4.79
240 251 2.430244 TCGTCAAGCTTCGGTCGC 60.430 61.111 7.60 0.00 0.00 5.19
241 252 2.430921 CGTCAAGCTTCGGTCGCT 60.431 61.111 0.00 0.00 39.94 4.93
242 253 2.437343 CGTCAAGCTTCGGTCGCTC 61.437 63.158 0.00 0.00 36.56 5.03
243 254 1.372997 GTCAAGCTTCGGTCGCTCA 60.373 57.895 0.00 0.00 36.56 4.26
244 255 1.372997 TCAAGCTTCGGTCGCTCAC 60.373 57.895 0.00 0.00 36.56 3.51
245 256 2.048127 AAGCTTCGGTCGCTCACC 60.048 61.111 0.00 0.00 42.69 4.02
246 257 3.591254 AAGCTTCGGTCGCTCACCC 62.591 63.158 0.00 0.00 43.31 4.61
247 258 4.070552 GCTTCGGTCGCTCACCCT 62.071 66.667 0.00 0.00 43.31 4.34
248 259 2.182030 CTTCGGTCGCTCACCCTC 59.818 66.667 0.00 0.00 43.31 4.30
249 260 3.685214 CTTCGGTCGCTCACCCTCG 62.685 68.421 0.00 0.00 43.31 4.63
253 264 4.070552 GTCGCTCACCCTCGCCTT 62.071 66.667 0.00 0.00 0.00 4.35
254 265 3.311110 TCGCTCACCCTCGCCTTT 61.311 61.111 0.00 0.00 0.00 3.11
255 266 3.121030 CGCTCACCCTCGCCTTTG 61.121 66.667 0.00 0.00 0.00 2.77
256 267 2.032681 GCTCACCCTCGCCTTTGT 59.967 61.111 0.00 0.00 0.00 2.83
257 268 2.035442 GCTCACCCTCGCCTTTGTC 61.035 63.158 0.00 0.00 0.00 3.18
258 269 1.674057 CTCACCCTCGCCTTTGTCT 59.326 57.895 0.00 0.00 0.00 3.41
259 270 0.895530 CTCACCCTCGCCTTTGTCTA 59.104 55.000 0.00 0.00 0.00 2.59
260 271 0.606604 TCACCCTCGCCTTTGTCTAC 59.393 55.000 0.00 0.00 0.00 2.59
261 272 0.320374 CACCCTCGCCTTTGTCTACA 59.680 55.000 0.00 0.00 0.00 2.74
262 273 0.608640 ACCCTCGCCTTTGTCTACAG 59.391 55.000 0.00 0.00 0.00 2.74
263 274 0.741221 CCCTCGCCTTTGTCTACAGC 60.741 60.000 0.00 0.00 0.00 4.40
264 275 0.741221 CCTCGCCTTTGTCTACAGCC 60.741 60.000 0.00 0.00 0.00 4.85
265 276 1.078759 CTCGCCTTTGTCTACAGCCG 61.079 60.000 0.00 0.00 0.00 5.52
266 277 2.740714 CGCCTTTGTCTACAGCCGC 61.741 63.158 0.00 0.00 0.00 6.53
267 278 1.376037 GCCTTTGTCTACAGCCGCT 60.376 57.895 0.00 0.00 0.00 5.52
268 279 1.362406 GCCTTTGTCTACAGCCGCTC 61.362 60.000 0.00 0.00 0.00 5.03
269 280 0.247736 CCTTTGTCTACAGCCGCTCT 59.752 55.000 0.00 0.00 0.00 4.09
270 281 1.634702 CTTTGTCTACAGCCGCTCTC 58.365 55.000 0.00 0.00 0.00 3.20
271 282 1.203523 CTTTGTCTACAGCCGCTCTCT 59.796 52.381 0.00 0.00 0.00 3.10
272 283 0.811915 TTGTCTACAGCCGCTCTCTC 59.188 55.000 0.00 0.00 0.00 3.20
273 284 1.032657 TGTCTACAGCCGCTCTCTCC 61.033 60.000 0.00 0.00 0.00 3.71
274 285 0.750182 GTCTACAGCCGCTCTCTCCT 60.750 60.000 0.00 0.00 0.00 3.69
275 286 0.464735 TCTACAGCCGCTCTCTCCTC 60.465 60.000 0.00 0.00 0.00 3.71
276 287 1.781025 CTACAGCCGCTCTCTCCTCG 61.781 65.000 0.00 0.00 0.00 4.63
277 288 2.253403 TACAGCCGCTCTCTCCTCGA 62.253 60.000 0.00 0.00 0.00 4.04
278 289 2.515991 AGCCGCTCTCTCCTCGAG 60.516 66.667 5.13 5.13 41.30 4.04
285 296 2.704725 CTCTCTCCTCGAGCAATAGC 57.295 55.000 6.99 0.00 39.70 2.97
286 297 1.952990 CTCTCTCCTCGAGCAATAGCA 59.047 52.381 6.99 0.00 45.49 3.49
287 298 1.952990 TCTCTCCTCGAGCAATAGCAG 59.047 52.381 6.99 2.26 45.49 4.24
288 299 0.387202 TCTCCTCGAGCAATAGCAGC 59.613 55.000 6.99 0.00 45.49 5.25
289 300 0.938637 CTCCTCGAGCAATAGCAGCG 60.939 60.000 6.99 0.00 45.49 5.18
290 301 1.227089 CCTCGAGCAATAGCAGCGT 60.227 57.895 6.99 0.00 45.49 5.07
291 302 0.807667 CCTCGAGCAATAGCAGCGTT 60.808 55.000 6.99 0.00 45.49 4.84
292 303 0.299895 CTCGAGCAATAGCAGCGTTG 59.700 55.000 0.00 8.69 45.49 4.10
301 312 3.966215 GCAGCGTTGCCTACTCAA 58.034 55.556 13.92 0.00 44.74 3.02
302 313 2.244000 GCAGCGTTGCCTACTCAAA 58.756 52.632 13.92 0.00 44.74 2.69
303 314 0.110192 GCAGCGTTGCCTACTCAAAC 60.110 55.000 13.92 0.00 44.74 2.93
304 315 0.163788 CAGCGTTGCCTACTCAAACG 59.836 55.000 2.99 2.99 0.00 3.60
305 316 0.949105 AGCGTTGCCTACTCAAACGG 60.949 55.000 8.95 0.00 0.00 4.44
306 317 1.226030 GCGTTGCCTACTCAAACGGT 61.226 55.000 8.95 0.00 0.00 4.83
307 318 0.788391 CGTTGCCTACTCAAACGGTC 59.212 55.000 0.00 0.00 0.00 4.79
308 319 1.870580 CGTTGCCTACTCAAACGGTCA 60.871 52.381 0.00 0.00 0.00 4.02
309 320 2.215196 GTTGCCTACTCAAACGGTCAA 58.785 47.619 0.00 0.00 0.00 3.18
310 321 2.614983 GTTGCCTACTCAAACGGTCAAA 59.385 45.455 0.00 0.00 0.00 2.69
311 322 2.215196 TGCCTACTCAAACGGTCAAAC 58.785 47.619 0.00 0.00 0.00 2.93
312 323 1.193874 GCCTACTCAAACGGTCAAACG 59.806 52.381 0.00 0.00 40.31 3.60
313 324 1.193874 CCTACTCAAACGGTCAAACGC 59.806 52.381 0.00 0.00 37.37 4.84
314 325 1.193874 CTACTCAAACGGTCAAACGCC 59.806 52.381 0.00 0.00 37.37 5.68
321 332 4.337060 GGTCAAACGCCGGCCAAC 62.337 66.667 23.46 11.63 0.00 3.77
322 333 4.676586 GTCAAACGCCGGCCAACG 62.677 66.667 23.46 9.53 43.80 4.10
345 356 4.200283 GACGCTCGCCCTCCTCAG 62.200 72.222 0.00 0.00 0.00 3.35
353 364 4.168291 CCCTCCTCAGGCGCCTTC 62.168 72.222 30.60 0.00 38.72 3.46
354 365 4.521062 CCTCCTCAGGCGCCTTCG 62.521 72.222 30.60 20.53 39.07 3.79
380 391 4.680237 CTCGTCGCTTGGGGCACA 62.680 66.667 0.00 0.00 41.91 4.57
381 392 4.680237 TCGTCGCTTGGGGCACAG 62.680 66.667 0.00 0.00 41.91 3.66
382 393 4.680237 CGTCGCTTGGGGCACAGA 62.680 66.667 0.00 0.00 41.91 3.41
383 394 2.045926 GTCGCTTGGGGCACAGAT 60.046 61.111 0.00 0.00 41.91 2.90
384 395 2.109126 GTCGCTTGGGGCACAGATC 61.109 63.158 0.00 0.00 41.91 2.75
385 396 3.197790 CGCTTGGGGCACAGATCG 61.198 66.667 0.00 0.00 41.91 3.69
386 397 2.268920 GCTTGGGGCACAGATCGA 59.731 61.111 0.00 0.00 41.35 3.59
387 398 1.817099 GCTTGGGGCACAGATCGAG 60.817 63.158 0.00 0.00 41.35 4.04
388 399 1.817099 CTTGGGGCACAGATCGAGC 60.817 63.158 0.00 0.00 0.00 5.03
392 403 2.279120 GGCACAGATCGAGCCGAG 60.279 66.667 9.75 0.00 41.80 4.63
393 404 2.492090 GCACAGATCGAGCCGAGT 59.508 61.111 0.00 0.00 39.91 4.18
394 405 1.153745 GCACAGATCGAGCCGAGTT 60.154 57.895 0.00 0.00 39.91 3.01
395 406 1.416813 GCACAGATCGAGCCGAGTTG 61.417 60.000 0.00 6.53 39.91 3.16
396 407 0.171231 CACAGATCGAGCCGAGTTGA 59.829 55.000 0.00 0.00 39.91 3.18
397 408 0.453793 ACAGATCGAGCCGAGTTGAG 59.546 55.000 0.00 2.87 39.91 3.02
398 409 0.735471 CAGATCGAGCCGAGTTGAGA 59.265 55.000 0.00 0.00 39.91 3.27
399 410 1.021202 AGATCGAGCCGAGTTGAGAG 58.979 55.000 0.00 0.00 39.91 3.20
400 411 0.030101 GATCGAGCCGAGTTGAGAGG 59.970 60.000 0.00 0.00 39.91 3.69
405 416 2.811317 CCGAGTTGAGAGGCACGC 60.811 66.667 0.00 0.00 0.00 5.34
406 417 3.175240 CGAGTTGAGAGGCACGCG 61.175 66.667 3.53 3.53 0.00 6.01
407 418 2.258591 GAGTTGAGAGGCACGCGA 59.741 61.111 15.93 0.00 0.00 5.87
408 419 1.803519 GAGTTGAGAGGCACGCGAG 60.804 63.158 15.93 5.97 0.00 5.03
409 420 2.811317 GTTGAGAGGCACGCGAGG 60.811 66.667 15.93 5.48 0.00 4.63
410 421 3.303135 TTGAGAGGCACGCGAGGT 61.303 61.111 15.93 0.00 0.00 3.85
431 442 2.732412 CTCGAGGAGCTTCTGTTTCA 57.268 50.000 0.00 0.00 0.00 2.69
432 443 2.605030 CTCGAGGAGCTTCTGTTTCAG 58.395 52.381 0.00 0.00 0.00 3.02
433 444 1.273606 TCGAGGAGCTTCTGTTTCAGG 59.726 52.381 0.00 0.00 31.51 3.86
434 445 1.447945 GAGGAGCTTCTGTTTCAGGC 58.552 55.000 0.00 0.00 31.51 4.85
435 446 0.767375 AGGAGCTTCTGTTTCAGGCA 59.233 50.000 0.00 0.00 31.51 4.75
436 447 1.143684 AGGAGCTTCTGTTTCAGGCAA 59.856 47.619 0.00 0.00 31.51 4.52
437 448 1.956477 GGAGCTTCTGTTTCAGGCAAA 59.044 47.619 0.00 0.00 31.51 3.68
438 449 2.030451 GGAGCTTCTGTTTCAGGCAAAG 60.030 50.000 0.00 0.00 31.51 2.77
439 450 1.959282 AGCTTCTGTTTCAGGCAAAGG 59.041 47.619 0.00 0.00 31.51 3.11
440 451 1.000171 GCTTCTGTTTCAGGCAAAGGG 60.000 52.381 0.00 0.00 31.51 3.95
441 452 2.310538 CTTCTGTTTCAGGCAAAGGGT 58.689 47.619 0.00 0.00 31.51 4.34
442 453 1.691196 TCTGTTTCAGGCAAAGGGTG 58.309 50.000 0.00 0.00 31.51 4.61
443 454 1.214175 TCTGTTTCAGGCAAAGGGTGA 59.786 47.619 0.00 0.00 31.51 4.02
444 455 1.610522 CTGTTTCAGGCAAAGGGTGAG 59.389 52.381 0.00 0.00 0.00 3.51
445 456 1.214175 TGTTTCAGGCAAAGGGTGAGA 59.786 47.619 0.00 0.00 0.00 3.27
446 457 2.158475 TGTTTCAGGCAAAGGGTGAGAT 60.158 45.455 0.00 0.00 0.00 2.75
447 458 2.205022 TTCAGGCAAAGGGTGAGATG 57.795 50.000 0.00 0.00 0.00 2.90
448 459 0.322816 TCAGGCAAAGGGTGAGATGC 60.323 55.000 0.00 0.00 38.06 3.91
449 460 0.609957 CAGGCAAAGGGTGAGATGCA 60.610 55.000 0.00 0.00 40.51 3.96
450 461 0.323178 AGGCAAAGGGTGAGATGCAG 60.323 55.000 0.00 0.00 40.51 4.41
451 462 1.509923 GCAAAGGGTGAGATGCAGC 59.490 57.895 0.00 0.00 44.17 5.25
452 463 1.798735 CAAAGGGTGAGATGCAGCG 59.201 57.895 0.00 0.00 45.82 5.18
453 464 0.674581 CAAAGGGTGAGATGCAGCGA 60.675 55.000 0.00 0.00 45.82 4.93
454 465 0.036732 AAAGGGTGAGATGCAGCGAA 59.963 50.000 0.00 0.00 45.82 4.70
455 466 0.392193 AAGGGTGAGATGCAGCGAAG 60.392 55.000 0.00 0.00 45.82 3.79
456 467 1.219124 GGGTGAGATGCAGCGAAGA 59.781 57.895 0.00 0.00 45.82 2.87
457 468 0.391661 GGGTGAGATGCAGCGAAGAA 60.392 55.000 0.00 0.00 45.82 2.52
458 469 1.442769 GGTGAGATGCAGCGAAGAAA 58.557 50.000 0.00 0.00 34.99 2.52
459 470 1.806542 GGTGAGATGCAGCGAAGAAAA 59.193 47.619 0.00 0.00 34.99 2.29
460 471 2.413371 GGTGAGATGCAGCGAAGAAAAC 60.413 50.000 0.00 0.00 34.99 2.43
461 472 1.460743 TGAGATGCAGCGAAGAAAACG 59.539 47.619 0.00 0.00 0.00 3.60
462 473 1.726791 GAGATGCAGCGAAGAAAACGA 59.273 47.619 0.00 0.00 0.00 3.85
463 474 2.349886 GAGATGCAGCGAAGAAAACGAT 59.650 45.455 0.00 0.00 0.00 3.73
464 475 2.744202 AGATGCAGCGAAGAAAACGATT 59.256 40.909 0.00 0.00 0.00 3.34
465 476 2.594529 TGCAGCGAAGAAAACGATTC 57.405 45.000 0.00 0.00 0.00 2.52
470 481 2.045607 CGAAGAAAACGATTCGCGAG 57.954 50.000 9.59 0.00 44.57 5.03
471 482 1.787083 GAAGAAAACGATTCGCGAGC 58.213 50.000 9.59 4.81 44.57 5.03
472 483 1.390463 GAAGAAAACGATTCGCGAGCT 59.610 47.619 9.59 0.00 44.57 4.09
473 484 0.992802 AGAAAACGATTCGCGAGCTC 59.007 50.000 9.59 9.79 44.57 4.09
474 485 0.025128 GAAAACGATTCGCGAGCTCC 59.975 55.000 9.59 0.00 44.57 4.70
475 486 1.683790 AAAACGATTCGCGAGCTCCG 61.684 55.000 9.59 12.90 44.57 4.63
476 487 2.814183 AAACGATTCGCGAGCTCCGT 62.814 55.000 19.53 14.39 44.57 4.69
485 496 4.329545 GAGCTCCGTGGTTGCCCA 62.330 66.667 0.87 0.00 38.87 5.36
486 497 3.628646 GAGCTCCGTGGTTGCCCAT 62.629 63.158 0.87 0.00 44.35 4.00
487 498 2.252072 GAGCTCCGTGGTTGCCCATA 62.252 60.000 0.87 0.00 44.35 2.74
488 499 1.152963 GCTCCGTGGTTGCCCATAT 60.153 57.895 0.00 0.00 44.35 1.78
489 500 1.166531 GCTCCGTGGTTGCCCATATC 61.167 60.000 0.00 0.00 44.35 1.63
490 501 0.535102 CTCCGTGGTTGCCCATATCC 60.535 60.000 0.00 0.00 44.35 2.59
491 502 1.891919 CCGTGGTTGCCCATATCCG 60.892 63.158 0.00 0.00 44.35 4.18
492 503 2.542907 CGTGGTTGCCCATATCCGC 61.543 63.158 0.00 0.00 44.35 5.54
493 504 2.203139 TGGTTGCCCATATCCGCG 60.203 61.111 0.00 0.00 35.17 6.46
494 505 2.110213 GGTTGCCCATATCCGCGA 59.890 61.111 8.23 0.00 0.00 5.87
495 506 1.961277 GGTTGCCCATATCCGCGAG 60.961 63.158 8.23 0.00 0.00 5.03
496 507 1.069090 GTTGCCCATATCCGCGAGA 59.931 57.895 8.23 3.13 0.00 4.04
497 508 0.531974 GTTGCCCATATCCGCGAGAA 60.532 55.000 8.23 0.00 0.00 2.87
498 509 0.396435 TTGCCCATATCCGCGAGAAT 59.604 50.000 8.23 0.00 0.00 2.40
499 510 0.037326 TGCCCATATCCGCGAGAATC 60.037 55.000 8.23 0.00 0.00 2.52
500 511 0.247736 GCCCATATCCGCGAGAATCT 59.752 55.000 8.23 0.00 0.00 2.40
501 512 1.737363 GCCCATATCCGCGAGAATCTC 60.737 57.143 8.23 0.00 0.00 2.75
502 513 1.134965 CCCATATCCGCGAGAATCTCC 60.135 57.143 8.23 0.00 0.00 3.71
503 514 1.134965 CCATATCCGCGAGAATCTCCC 60.135 57.143 8.23 0.00 0.00 4.30
504 515 0.811915 ATATCCGCGAGAATCTCCCG 59.188 55.000 8.23 10.10 32.42 5.14
505 516 0.536687 TATCCGCGAGAATCTCCCGT 60.537 55.000 15.04 1.80 30.91 5.28
506 517 0.536687 ATCCGCGAGAATCTCCCGTA 60.537 55.000 15.04 0.92 30.91 4.02
507 518 1.008767 CCGCGAGAATCTCCCGTAC 60.009 63.158 15.04 0.00 30.91 3.67
508 519 1.368969 CGCGAGAATCTCCCGTACG 60.369 63.158 8.69 8.69 28.70 3.67
509 520 1.726265 GCGAGAATCTCCCGTACGT 59.274 57.895 15.21 0.00 0.00 3.57
510 521 0.591741 GCGAGAATCTCCCGTACGTG 60.592 60.000 15.21 2.17 0.00 4.49
511 522 0.591741 CGAGAATCTCCCGTACGTGC 60.592 60.000 15.21 0.00 0.00 5.34
512 523 0.591741 GAGAATCTCCCGTACGTGCG 60.592 60.000 19.61 19.61 0.00 5.34
529 540 1.423845 CGGAGCCGGATTTTCAACG 59.576 57.895 5.05 0.00 35.56 4.10
530 541 1.017177 CGGAGCCGGATTTTCAACGA 61.017 55.000 5.05 0.00 35.56 3.85
531 542 1.161843 GGAGCCGGATTTTCAACGAA 58.838 50.000 5.05 0.00 0.00 3.85
532 543 1.743394 GGAGCCGGATTTTCAACGAAT 59.257 47.619 5.05 0.00 0.00 3.34
533 544 2.940410 GGAGCCGGATTTTCAACGAATA 59.060 45.455 5.05 0.00 0.00 1.75
534 545 3.564225 GGAGCCGGATTTTCAACGAATAT 59.436 43.478 5.05 0.00 0.00 1.28
535 546 4.036380 GGAGCCGGATTTTCAACGAATATT 59.964 41.667 5.05 0.00 0.00 1.28
536 547 5.169836 AGCCGGATTTTCAACGAATATTC 57.830 39.130 5.05 5.30 0.00 1.75
537 548 4.036380 AGCCGGATTTTCAACGAATATTCC 59.964 41.667 5.05 0.00 0.00 3.01
538 549 4.201970 GCCGGATTTTCAACGAATATTCCA 60.202 41.667 5.05 0.00 0.00 3.53
539 550 5.510671 CCGGATTTTCAACGAATATTCCAG 58.489 41.667 9.87 0.00 0.00 3.86
540 551 5.505654 CCGGATTTTCAACGAATATTCCAGG 60.506 44.000 9.87 0.00 0.00 4.45
541 552 5.295787 CGGATTTTCAACGAATATTCCAGGA 59.704 40.000 9.87 2.18 0.00 3.86
542 553 6.183360 CGGATTTTCAACGAATATTCCAGGAA 60.183 38.462 3.72 3.72 0.00 3.36
543 554 7.468631 CGGATTTTCAACGAATATTCCAGGAAT 60.469 37.037 19.08 19.08 36.20 3.01
544 555 7.862873 GGATTTTCAACGAATATTCCAGGAATC 59.137 37.037 18.67 4.57 33.95 2.52
545 556 7.938140 TTTTCAACGAATATTCCAGGAATCT 57.062 32.000 18.67 6.07 33.95 2.40
546 557 6.925610 TTCAACGAATATTCCAGGAATCTG 57.074 37.500 18.67 9.23 40.59 2.90
559 570 5.033589 CAGGAATCTGGCTATCCATATCC 57.966 47.826 4.20 4.20 42.51 2.59
560 571 4.720773 CAGGAATCTGGCTATCCATATCCT 59.279 45.833 7.72 7.72 43.54 3.24
561 572 5.191323 CAGGAATCTGGCTATCCATATCCTT 59.809 44.000 9.92 0.00 42.16 3.36
562 573 5.794816 AGGAATCTGGCTATCCATATCCTTT 59.205 40.000 7.72 0.00 41.74 3.11
563 574 6.069731 AGGAATCTGGCTATCCATATCCTTTC 60.070 42.308 7.72 0.00 41.74 2.62
564 575 6.069731 GGAATCTGGCTATCCATATCCTTTCT 60.070 42.308 4.89 0.00 42.51 2.52
565 576 6.558488 ATCTGGCTATCCATATCCTTTCTC 57.442 41.667 0.00 0.00 42.51 2.87
566 577 4.464244 TCTGGCTATCCATATCCTTTCTCG 59.536 45.833 0.00 0.00 42.51 4.04
567 578 3.055819 TGGCTATCCATATCCTTTCTCGC 60.056 47.826 0.00 0.00 37.47 5.03
568 579 3.526534 GCTATCCATATCCTTTCTCGCC 58.473 50.000 0.00 0.00 0.00 5.54
569 580 3.680196 GCTATCCATATCCTTTCTCGCCC 60.680 52.174 0.00 0.00 0.00 6.13
570 581 1.801242 TCCATATCCTTTCTCGCCCA 58.199 50.000 0.00 0.00 0.00 5.36
571 582 2.338809 TCCATATCCTTTCTCGCCCAT 58.661 47.619 0.00 0.00 0.00 4.00
572 583 2.038952 TCCATATCCTTTCTCGCCCATG 59.961 50.000 0.00 0.00 0.00 3.66
573 584 2.038952 CCATATCCTTTCTCGCCCATGA 59.961 50.000 0.00 0.00 0.00 3.07
574 585 3.496692 CCATATCCTTTCTCGCCCATGAA 60.497 47.826 0.00 0.00 0.00 2.57
575 586 2.044123 ATCCTTTCTCGCCCATGAAC 57.956 50.000 0.00 0.00 0.00 3.18
576 587 0.035439 TCCTTTCTCGCCCATGAACC 60.035 55.000 0.00 0.00 0.00 3.62
577 588 0.322456 CCTTTCTCGCCCATGAACCA 60.322 55.000 0.00 0.00 0.00 3.67
578 589 1.533625 CTTTCTCGCCCATGAACCAA 58.466 50.000 0.00 0.00 0.00 3.67
579 590 1.885887 CTTTCTCGCCCATGAACCAAA 59.114 47.619 0.00 0.00 0.00 3.28
580 591 1.243902 TTCTCGCCCATGAACCAAAC 58.756 50.000 0.00 0.00 0.00 2.93
581 592 0.953471 TCTCGCCCATGAACCAAACG 60.953 55.000 0.00 0.00 0.00 3.60
582 593 2.126502 CGCCCATGAACCAAACGC 60.127 61.111 0.00 0.00 0.00 4.84
583 594 2.261361 GCCCATGAACCAAACGCC 59.739 61.111 0.00 0.00 0.00 5.68
584 595 2.275380 GCCCATGAACCAAACGCCT 61.275 57.895 0.00 0.00 0.00 5.52
585 596 1.586028 CCCATGAACCAAACGCCTG 59.414 57.895 0.00 0.00 0.00 4.85
586 597 1.586028 CCATGAACCAAACGCCTGG 59.414 57.895 0.00 1.88 42.68 4.45
592 603 4.235731 CCAAACGCCTGGTATCCC 57.764 61.111 0.00 0.00 0.00 3.85
593 604 1.607612 CCAAACGCCTGGTATCCCT 59.392 57.895 0.00 0.00 0.00 4.20
594 605 0.834612 CCAAACGCCTGGTATCCCTA 59.165 55.000 0.00 0.00 0.00 3.53
595 606 1.210967 CCAAACGCCTGGTATCCCTAA 59.789 52.381 0.00 0.00 0.00 2.69
596 607 2.356330 CCAAACGCCTGGTATCCCTAAA 60.356 50.000 0.00 0.00 0.00 1.85
597 608 3.349022 CAAACGCCTGGTATCCCTAAAA 58.651 45.455 0.00 0.00 0.00 1.52
598 609 3.724732 AACGCCTGGTATCCCTAAAAA 57.275 42.857 0.00 0.00 0.00 1.94
621 632 2.737830 GGCTATCCCTGTCCTCGC 59.262 66.667 0.00 0.00 0.00 5.03
622 633 1.834822 GGCTATCCCTGTCCTCGCT 60.835 63.158 0.00 0.00 0.00 4.93
623 634 1.365633 GCTATCCCTGTCCTCGCTG 59.634 63.158 0.00 0.00 0.00 5.18
624 635 2.045280 CTATCCCTGTCCTCGCTGG 58.955 63.158 0.00 0.00 37.10 4.85
625 636 1.457643 TATCCCTGTCCTCGCTGGG 60.458 63.158 0.00 0.00 45.62 4.45
628 639 2.759973 CCTGTCCTCGCTGGGCTA 60.760 66.667 0.98 0.00 42.07 3.93
629 640 2.136878 CCTGTCCTCGCTGGGCTAT 61.137 63.158 0.98 0.00 42.07 2.97
630 641 1.365633 CTGTCCTCGCTGGGCTATC 59.634 63.158 0.98 0.00 42.07 2.08
631 642 2.093537 CTGTCCTCGCTGGGCTATCC 62.094 65.000 0.98 0.00 42.07 2.59
653 664 2.050477 GGAACCAAACGCATCACAAG 57.950 50.000 0.00 0.00 0.00 3.16
654 665 1.408422 GAACCAAACGCATCACAAGC 58.592 50.000 0.00 0.00 0.00 4.01
665 676 2.518349 CACAAGCGGGTGTGGGTT 60.518 61.111 9.56 0.00 44.29 4.11
666 677 2.124693 CACAAGCGGGTGTGGGTTT 61.125 57.895 9.56 0.00 44.29 3.27
667 678 2.124693 ACAAGCGGGTGTGGGTTTG 61.125 57.895 0.00 0.00 0.00 2.93
668 679 3.223589 AAGCGGGTGTGGGTTTGC 61.224 61.111 0.00 0.00 0.00 3.68
671 682 4.939368 CGGGTGTGGGTTTGCGGA 62.939 66.667 0.00 0.00 0.00 5.54
672 683 3.292159 GGGTGTGGGTTTGCGGAC 61.292 66.667 0.00 0.00 0.00 4.79
673 684 3.656045 GGTGTGGGTTTGCGGACG 61.656 66.667 0.00 0.00 0.00 4.79
674 685 3.656045 GTGTGGGTTTGCGGACGG 61.656 66.667 0.00 0.00 0.00 4.79
779 790 5.050837 GGTTCTTTGTTGATGACATTGTTGC 60.051 40.000 0.00 0.00 38.26 4.17
788 799 2.221169 TGACATTGTTGCCTGTCAGAC 58.779 47.619 0.00 0.00 45.01 3.51
809 820 5.236478 AGACTATGTTCGCAATATTTTCGGG 59.764 40.000 6.93 0.00 0.00 5.14
810 821 4.879545 ACTATGTTCGCAATATTTTCGGGT 59.120 37.500 6.93 0.00 0.00 5.28
867 878 5.487433 TCACCATGTACTATGTGTGAAAGG 58.513 41.667 17.02 0.00 31.34 3.11
889 900 1.679153 TGTCAGAGTGCGTGTGTCTTA 59.321 47.619 0.00 0.00 0.00 2.10
914 925 3.084039 CAGTCTCAAAGCCCATAAAGCA 58.916 45.455 0.00 0.00 0.00 3.91
915 926 3.128242 CAGTCTCAAAGCCCATAAAGCAG 59.872 47.826 0.00 0.00 0.00 4.24
916 927 2.424956 GTCTCAAAGCCCATAAAGCAGG 59.575 50.000 0.00 0.00 0.00 4.85
1015 1031 5.242615 ACTTGGAAAATGGCTTCTTCTTCTC 59.757 40.000 0.00 0.00 0.00 2.87
1016 1032 4.082125 TGGAAAATGGCTTCTTCTTCTCC 58.918 43.478 0.00 0.00 0.00 3.71
1017 1033 4.202609 TGGAAAATGGCTTCTTCTTCTCCT 60.203 41.667 0.00 0.00 0.00 3.69
1018 1034 4.769488 GGAAAATGGCTTCTTCTTCTCCTT 59.231 41.667 0.00 0.00 0.00 3.36
1019 1035 5.105957 GGAAAATGGCTTCTTCTTCTCCTTC 60.106 44.000 0.00 0.00 0.00 3.46
1020 1036 4.925390 AATGGCTTCTTCTTCTCCTTCT 57.075 40.909 0.00 0.00 0.00 2.85
1368 1384 2.204151 CCCCACCTCAGGACCCTT 60.204 66.667 0.00 0.00 0.00 3.95
1389 1405 1.374758 CCTCTTCGGCTGCTTCGTT 60.375 57.895 0.00 0.00 0.00 3.85
1476 1545 3.647771 AAGTCCAACCCGGGCCTC 61.648 66.667 24.08 7.04 42.15 4.70
1739 1847 0.327867 AGGAGATTGGAGGGATGGCA 60.328 55.000 0.00 0.00 0.00 4.92
2027 2135 4.955774 GTGGTCGGGTCGTTGCGT 62.956 66.667 0.00 0.00 0.00 5.24
2445 2582 1.360192 GTGTGCCACCTTCTTGTGC 59.640 57.895 0.00 0.00 34.85 4.57
2533 2695 4.531659 ACGTGTTCTCTTGCAGTTTTAC 57.468 40.909 0.00 0.00 0.00 2.01
2538 2700 3.695830 TCTCTTGCAGTTTTACCCGAT 57.304 42.857 0.00 0.00 0.00 4.18
2561 2724 2.231235 GGATGAACGTTCCAAAATGCCT 59.769 45.455 24.78 0.00 33.21 4.75
2570 2733 1.474332 CCAAAATGCCTGCACCTGGT 61.474 55.000 0.00 0.00 0.00 4.00
2576 2739 2.109126 GCCTGCACCTGGTTCGATC 61.109 63.158 0.00 0.00 0.00 3.69
2579 2742 3.554692 GCACCTGGTTCGATCGCG 61.555 66.667 11.09 0.00 39.35 5.87
2602 2765 0.465705 TAGGCACATCCTACAGCAGC 59.534 55.000 0.00 0.00 45.41 5.25
2623 2786 3.836949 CGTGCCAATATTTGAGCACTTT 58.163 40.909 22.80 0.00 46.37 2.66
2629 2792 8.720562 GTGCCAATATTTGAGCACTTTTAAATT 58.279 29.630 20.20 0.00 45.74 1.82
2657 2820 7.654568 ACTACATTTTAGCACCTTTTAACACC 58.345 34.615 0.00 0.00 0.00 4.16
2658 2821 5.849510 ACATTTTAGCACCTTTTAACACCC 58.150 37.500 0.00 0.00 0.00 4.61
2659 2822 5.600898 ACATTTTAGCACCTTTTAACACCCT 59.399 36.000 0.00 0.00 0.00 4.34
2660 2823 5.777850 TTTTAGCACCTTTTAACACCCTC 57.222 39.130 0.00 0.00 0.00 4.30
2661 2824 2.287977 AGCACCTTTTAACACCCTCC 57.712 50.000 0.00 0.00 0.00 4.30
2662 2825 0.879090 GCACCTTTTAACACCCTCCG 59.121 55.000 0.00 0.00 0.00 4.63
2663 2826 1.816572 GCACCTTTTAACACCCTCCGT 60.817 52.381 0.00 0.00 0.00 4.69
2664 2827 2.578786 CACCTTTTAACACCCTCCGTT 58.421 47.619 0.00 0.00 0.00 4.44
2665 2828 2.551032 CACCTTTTAACACCCTCCGTTC 59.449 50.000 0.00 0.00 0.00 3.95
2666 2829 2.156917 CCTTTTAACACCCTCCGTTCC 58.843 52.381 0.00 0.00 0.00 3.62
2667 2830 2.487625 CCTTTTAACACCCTCCGTTCCA 60.488 50.000 0.00 0.00 0.00 3.53
2668 2831 3.215975 CTTTTAACACCCTCCGTTCCAA 58.784 45.455 0.00 0.00 0.00 3.53
2669 2832 3.294038 TTTAACACCCTCCGTTCCAAA 57.706 42.857 0.00 0.00 0.00 3.28
2670 2833 3.512219 TTAACACCCTCCGTTCCAAAT 57.488 42.857 0.00 0.00 0.00 2.32
2671 2834 2.375014 AACACCCTCCGTTCCAAATT 57.625 45.000 0.00 0.00 0.00 1.82
2672 2835 3.512219 AACACCCTCCGTTCCAAATTA 57.488 42.857 0.00 0.00 0.00 1.40
2673 2836 2.786777 ACACCCTCCGTTCCAAATTAC 58.213 47.619 0.00 0.00 0.00 1.89
2674 2837 2.374170 ACACCCTCCGTTCCAAATTACT 59.626 45.455 0.00 0.00 0.00 2.24
2675 2838 3.181437 ACACCCTCCGTTCCAAATTACTT 60.181 43.478 0.00 0.00 0.00 2.24
2676 2839 3.190535 CACCCTCCGTTCCAAATTACTTG 59.809 47.826 0.00 0.00 34.52 3.16
2677 2840 3.181437 ACCCTCCGTTCCAAATTACTTGT 60.181 43.478 0.00 0.00 32.65 3.16
2678 2841 3.190535 CCCTCCGTTCCAAATTACTTGTG 59.809 47.826 0.00 0.00 32.65 3.33
2679 2842 4.069304 CCTCCGTTCCAAATTACTTGTGA 58.931 43.478 0.00 0.00 32.65 3.58
2680 2843 4.517453 CCTCCGTTCCAAATTACTTGTGAA 59.483 41.667 0.00 0.00 32.65 3.18
2681 2844 5.009210 CCTCCGTTCCAAATTACTTGTGAAA 59.991 40.000 0.00 0.00 32.65 2.69
2682 2845 6.294508 CCTCCGTTCCAAATTACTTGTGAAAT 60.295 38.462 0.00 0.00 32.65 2.17
2683 2846 6.442952 TCCGTTCCAAATTACTTGTGAAATG 58.557 36.000 0.00 0.00 32.65 2.32
2684 2847 5.633182 CCGTTCCAAATTACTTGTGAAATGG 59.367 40.000 0.00 0.00 32.65 3.16
2685 2848 6.212955 CGTTCCAAATTACTTGTGAAATGGT 58.787 36.000 0.00 0.00 32.65 3.55
2686 2849 6.699642 CGTTCCAAATTACTTGTGAAATGGTT 59.300 34.615 0.00 0.00 32.65 3.67
2687 2850 7.306515 CGTTCCAAATTACTTGTGAAATGGTTG 60.307 37.037 0.00 0.00 32.65 3.77
2688 2851 7.118496 TCCAAATTACTTGTGAAATGGTTGT 57.882 32.000 0.00 0.00 32.65 3.32
2689 2852 8.239038 TCCAAATTACTTGTGAAATGGTTGTA 57.761 30.769 0.00 0.00 32.65 2.41
2690 2853 8.865090 TCCAAATTACTTGTGAAATGGTTGTAT 58.135 29.630 0.00 0.00 32.65 2.29
2691 2854 9.139174 CCAAATTACTTGTGAAATGGTTGTATC 57.861 33.333 0.00 0.00 32.65 2.24
2692 2855 9.912634 CAAATTACTTGTGAAATGGTTGTATCT 57.087 29.630 0.00 0.00 0.00 1.98
2695 2858 8.786826 TTACTTGTGAAATGGTTGTATCTAGG 57.213 34.615 0.00 0.00 0.00 3.02
2696 2859 7.016153 ACTTGTGAAATGGTTGTATCTAGGA 57.984 36.000 0.00 0.00 0.00 2.94
2697 2860 7.458397 ACTTGTGAAATGGTTGTATCTAGGAA 58.542 34.615 0.00 0.00 0.00 3.36
2698 2861 8.109634 ACTTGTGAAATGGTTGTATCTAGGAAT 58.890 33.333 0.00 0.00 0.00 3.01
2699 2862 7.864108 TGTGAAATGGTTGTATCTAGGAATG 57.136 36.000 0.00 0.00 0.00 2.67
2700 2863 6.828273 TGTGAAATGGTTGTATCTAGGAATGG 59.172 38.462 0.00 0.00 0.00 3.16
2701 2864 6.263168 GTGAAATGGTTGTATCTAGGAATGGG 59.737 42.308 0.00 0.00 0.00 4.00
2702 2865 5.324832 AATGGTTGTATCTAGGAATGGGG 57.675 43.478 0.00 0.00 0.00 4.96
2703 2866 3.743132 TGGTTGTATCTAGGAATGGGGT 58.257 45.455 0.00 0.00 0.00 4.95
2704 2867 3.458118 TGGTTGTATCTAGGAATGGGGTG 59.542 47.826 0.00 0.00 0.00 4.61
2705 2868 3.714798 GGTTGTATCTAGGAATGGGGTGA 59.285 47.826 0.00 0.00 0.00 4.02
2706 2869 4.444449 GGTTGTATCTAGGAATGGGGTGAC 60.444 50.000 0.00 0.00 0.00 3.67
2707 2870 4.002256 TGTATCTAGGAATGGGGTGACA 57.998 45.455 0.00 0.00 0.00 3.58
2708 2871 4.367166 TGTATCTAGGAATGGGGTGACAA 58.633 43.478 0.00 0.00 0.00 3.18
2709 2872 4.785914 TGTATCTAGGAATGGGGTGACAAA 59.214 41.667 0.00 0.00 0.00 2.83
2710 2873 5.431731 TGTATCTAGGAATGGGGTGACAAAT 59.568 40.000 0.00 0.00 0.00 2.32
2711 2874 6.617784 TGTATCTAGGAATGGGGTGACAAATA 59.382 38.462 0.00 0.00 0.00 1.40
2712 2875 6.590656 ATCTAGGAATGGGGTGACAAATAA 57.409 37.500 0.00 0.00 0.00 1.40
2713 2876 5.751586 TCTAGGAATGGGGTGACAAATAAC 58.248 41.667 0.00 0.00 0.00 1.89
2714 2877 4.675063 AGGAATGGGGTGACAAATAACT 57.325 40.909 0.00 0.00 0.00 2.24
2715 2878 4.600062 AGGAATGGGGTGACAAATAACTC 58.400 43.478 0.00 0.00 0.00 3.01
2716 2879 3.377172 GGAATGGGGTGACAAATAACTCG 59.623 47.826 0.00 0.00 0.00 4.18
2717 2880 1.816074 TGGGGTGACAAATAACTCGC 58.184 50.000 0.00 0.00 0.00 5.03
2718 2881 1.092348 GGGGTGACAAATAACTCGCC 58.908 55.000 0.00 0.00 36.48 5.54
2719 2882 1.339727 GGGGTGACAAATAACTCGCCT 60.340 52.381 0.00 0.00 37.26 5.52
2720 2883 1.737793 GGGTGACAAATAACTCGCCTG 59.262 52.381 0.00 0.00 37.26 4.85
2721 2884 2.614481 GGGTGACAAATAACTCGCCTGA 60.614 50.000 0.00 0.00 37.26 3.86
2722 2885 3.071479 GGTGACAAATAACTCGCCTGAA 58.929 45.455 0.00 0.00 34.68 3.02
2723 2886 3.689649 GGTGACAAATAACTCGCCTGAAT 59.310 43.478 0.00 0.00 34.68 2.57
2724 2887 4.156008 GGTGACAAATAACTCGCCTGAATT 59.844 41.667 0.00 0.00 34.68 2.17
2725 2888 5.353123 GGTGACAAATAACTCGCCTGAATTA 59.647 40.000 0.00 0.00 34.68 1.40
2726 2889 6.248631 GTGACAAATAACTCGCCTGAATTAC 58.751 40.000 0.00 0.00 0.00 1.89
2727 2890 6.092259 GTGACAAATAACTCGCCTGAATTACT 59.908 38.462 0.00 0.00 0.00 2.24
2728 2891 6.653320 TGACAAATAACTCGCCTGAATTACTT 59.347 34.615 0.00 0.00 0.00 2.24
2729 2892 6.842163 ACAAATAACTCGCCTGAATTACTTG 58.158 36.000 0.00 0.00 31.50 3.16
2730 2893 6.430000 ACAAATAACTCGCCTGAATTACTTGT 59.570 34.615 0.00 0.00 33.14 3.16
2731 2894 6.422776 AATAACTCGCCTGAATTACTTGTG 57.577 37.500 0.00 0.00 0.00 3.33
2732 2895 3.678056 ACTCGCCTGAATTACTTGTGA 57.322 42.857 0.00 0.00 0.00 3.58
2733 2896 4.002906 ACTCGCCTGAATTACTTGTGAA 57.997 40.909 0.00 0.00 0.00 3.18
2734 2897 4.385825 ACTCGCCTGAATTACTTGTGAAA 58.614 39.130 0.00 0.00 0.00 2.69
2735 2898 5.003804 ACTCGCCTGAATTACTTGTGAAAT 58.996 37.500 0.00 0.00 0.00 2.17
2736 2899 5.106555 ACTCGCCTGAATTACTTGTGAAATG 60.107 40.000 0.00 0.00 0.00 2.32
2737 2900 4.155826 TCGCCTGAATTACTTGTGAAATGG 59.844 41.667 0.00 0.00 0.00 3.16
2738 2901 4.675146 CGCCTGAATTACTTGTGAAATGGG 60.675 45.833 0.00 0.00 0.00 4.00
2739 2902 4.220602 GCCTGAATTACTTGTGAAATGGGT 59.779 41.667 0.00 0.00 0.00 4.51
2740 2903 5.417580 GCCTGAATTACTTGTGAAATGGGTA 59.582 40.000 0.00 0.00 0.00 3.69
2741 2904 6.071616 GCCTGAATTACTTGTGAAATGGGTAA 60.072 38.462 0.00 0.00 0.00 2.85
2742 2905 7.524698 GCCTGAATTACTTGTGAAATGGGTAAA 60.525 37.037 0.00 0.00 0.00 2.01
2743 2906 8.364142 CCTGAATTACTTGTGAAATGGGTAAAA 58.636 33.333 0.00 0.00 0.00 1.52
2744 2907 9.757227 CTGAATTACTTGTGAAATGGGTAAAAA 57.243 29.630 0.00 0.00 0.00 1.94
2747 2910 9.500785 AATTACTTGTGAAATGGGTAAAAATGG 57.499 29.630 0.00 0.00 0.00 3.16
2748 2911 6.739331 ACTTGTGAAATGGGTAAAAATGGA 57.261 33.333 0.00 0.00 0.00 3.41
2749 2912 7.315066 ACTTGTGAAATGGGTAAAAATGGAT 57.685 32.000 0.00 0.00 0.00 3.41
2750 2913 7.160726 ACTTGTGAAATGGGTAAAAATGGATG 58.839 34.615 0.00 0.00 0.00 3.51
2751 2914 6.678568 TGTGAAATGGGTAAAAATGGATGT 57.321 33.333 0.00 0.00 0.00 3.06
2752 2915 7.782897 TGTGAAATGGGTAAAAATGGATGTA 57.217 32.000 0.00 0.00 0.00 2.29
2753 2916 8.372877 TGTGAAATGGGTAAAAATGGATGTAT 57.627 30.769 0.00 0.00 0.00 2.29
2754 2917 8.474025 TGTGAAATGGGTAAAAATGGATGTATC 58.526 33.333 0.00 0.00 0.00 2.24
2755 2918 8.695456 GTGAAATGGGTAAAAATGGATGTATCT 58.305 33.333 0.00 0.00 0.00 1.98
2756 2919 9.928618 TGAAATGGGTAAAAATGGATGTATCTA 57.071 29.630 0.00 0.00 0.00 1.98
2766 2929 8.930846 AAAATGGATGTATCTAAAGATGAGGG 57.069 34.615 2.66 0.00 36.05 4.30
2767 2930 7.639062 AATGGATGTATCTAAAGATGAGGGT 57.361 36.000 2.66 0.00 36.05 4.34
2768 2931 6.425210 TGGATGTATCTAAAGATGAGGGTG 57.575 41.667 2.66 0.00 36.05 4.61
2769 2932 6.143206 TGGATGTATCTAAAGATGAGGGTGA 58.857 40.000 2.66 0.00 36.05 4.02
2770 2933 6.042093 TGGATGTATCTAAAGATGAGGGTGAC 59.958 42.308 2.66 0.00 36.05 3.67
2771 2934 6.042093 GGATGTATCTAAAGATGAGGGTGACA 59.958 42.308 2.66 0.00 36.05 3.58
2772 2935 6.867519 TGTATCTAAAGATGAGGGTGACAA 57.132 37.500 2.66 0.00 36.05 3.18
2773 2936 6.878317 TGTATCTAAAGATGAGGGTGACAAG 58.122 40.000 2.66 0.00 36.05 3.16
2774 2937 6.440647 TGTATCTAAAGATGAGGGTGACAAGT 59.559 38.462 2.66 0.00 36.05 3.16
2775 2938 7.618117 TGTATCTAAAGATGAGGGTGACAAGTA 59.382 37.037 2.66 0.00 36.05 2.24
2776 2939 6.928348 TCTAAAGATGAGGGTGACAAGTAA 57.072 37.500 0.00 0.00 0.00 2.24
2777 2940 6.698380 TCTAAAGATGAGGGTGACAAGTAAC 58.302 40.000 0.00 0.00 0.00 2.50
2778 2941 5.568620 AAAGATGAGGGTGACAAGTAACT 57.431 39.130 0.00 0.00 0.00 2.24
2779 2942 5.568620 AAGATGAGGGTGACAAGTAACTT 57.431 39.130 0.00 0.00 0.00 2.66
2780 2943 4.899502 AGATGAGGGTGACAAGTAACTTG 58.100 43.478 0.00 0.00 45.85 3.16
2781 2944 4.593206 AGATGAGGGTGACAAGTAACTTGA 59.407 41.667 0.00 0.00 43.42 3.02
2782 2945 4.764050 TGAGGGTGACAAGTAACTTGAA 57.236 40.909 0.00 0.00 43.42 2.69
2783 2946 5.105567 TGAGGGTGACAAGTAACTTGAAA 57.894 39.130 0.00 0.00 43.42 2.69
2784 2947 5.690865 TGAGGGTGACAAGTAACTTGAAAT 58.309 37.500 0.00 0.00 43.42 2.17
2785 2948 5.530915 TGAGGGTGACAAGTAACTTGAAATG 59.469 40.000 0.00 0.00 43.42 2.32
2786 2949 5.690865 AGGGTGACAAGTAACTTGAAATGA 58.309 37.500 0.00 0.00 43.42 2.57
2787 2950 6.126409 AGGGTGACAAGTAACTTGAAATGAA 58.874 36.000 0.00 0.00 43.42 2.57
2788 2951 6.263168 AGGGTGACAAGTAACTTGAAATGAAG 59.737 38.462 0.00 0.00 43.42 3.02
2789 2952 6.438763 GGTGACAAGTAACTTGAAATGAAGG 58.561 40.000 0.00 0.00 43.42 3.46
2790 2953 6.262273 GGTGACAAGTAACTTGAAATGAAGGA 59.738 38.462 0.00 0.00 43.42 3.36
2791 2954 7.355778 GTGACAAGTAACTTGAAATGAAGGAG 58.644 38.462 0.00 0.00 43.42 3.69
2792 2955 7.012421 GTGACAAGTAACTTGAAATGAAGGAGT 59.988 37.037 0.00 0.00 43.42 3.85
2793 2956 8.208224 TGACAAGTAACTTGAAATGAAGGAGTA 58.792 33.333 0.00 0.00 43.42 2.59
2794 2957 9.220767 GACAAGTAACTTGAAATGAAGGAGTAT 57.779 33.333 0.00 0.00 43.42 2.12
2826 2989 9.573133 AAAATAAAATTTGCATCTTCCTACGAG 57.427 29.630 0.00 0.00 0.00 4.18
2827 2990 5.567138 AAAATTTGCATCTTCCTACGAGG 57.433 39.130 0.00 0.00 36.46 4.63
2828 2991 2.691409 TTTGCATCTTCCTACGAGGG 57.309 50.000 0.00 0.00 35.59 4.30
2829 2992 0.830648 TTGCATCTTCCTACGAGGGG 59.169 55.000 0.00 0.00 35.59 4.79
2830 2993 1.048724 TGCATCTTCCTACGAGGGGG 61.049 60.000 0.00 0.00 35.59 5.40
3041 3206 3.758554 CCTAACCATGGACAAAGAGTTGG 59.241 47.826 21.47 1.01 39.22 3.77
3165 3330 8.722480 TTCTTCATGACTTATACATGTTCCTG 57.278 34.615 2.30 0.00 43.56 3.86
3176 3341 4.478206 ACATGTTCCTGTGACTATGAGG 57.522 45.455 0.00 0.00 0.00 3.86
3402 3634 8.236586 CAAGCATTGCAACTAATGAGTTAGTTA 58.763 33.333 11.91 0.48 46.94 2.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
53 54 4.381612 CCTGCTACAGAAGATTTCGTGGTA 60.382 45.833 0.00 0.00 32.44 3.25
58 59 5.010112 TCCTATCCTGCTACAGAAGATTTCG 59.990 44.000 0.00 0.00 32.44 3.46
70 71 4.039245 GTGTGCACTAATCCTATCCTGCTA 59.961 45.833 19.41 0.00 0.00 3.49
76 77 6.422223 CAAATTCGTGTGCACTAATCCTATC 58.578 40.000 19.41 0.00 0.00 2.08
79 80 3.119849 GCAAATTCGTGTGCACTAATCCT 60.120 43.478 19.41 4.16 40.58 3.24
93 103 4.165779 GGGTATGTTCTGTTGCAAATTCG 58.834 43.478 0.00 0.00 0.00 3.34
97 107 3.957497 AGTTGGGTATGTTCTGTTGCAAA 59.043 39.130 0.00 0.00 0.00 3.68
111 121 4.528987 TGCTGTGTACTGATTAGTTGGGTA 59.471 41.667 0.00 0.00 38.36 3.69
142 152 2.094906 TGTACTGTACAGACGCATGGTC 60.095 50.000 29.30 8.43 46.45 4.02
153 163 2.687370 CATGCTGCTGTGTACTGTACA 58.313 47.619 16.26 16.26 36.08 2.90
197 208 0.042535 CGTTTGTGCTGTGTGTACCG 60.043 55.000 0.00 0.00 0.00 4.02
208 219 4.072088 CGAGGGCGTCGTTTGTGC 62.072 66.667 20.45 0.00 44.20 4.57
218 229 3.181967 CGAAGCTTGACGAGGGCG 61.182 66.667 2.10 0.00 44.79 6.13
219 230 2.815647 CCGAAGCTTGACGAGGGC 60.816 66.667 2.10 0.00 0.00 5.19
220 231 1.446272 GACCGAAGCTTGACGAGGG 60.446 63.158 2.10 0.00 0.00 4.30
221 232 1.801913 CGACCGAAGCTTGACGAGG 60.802 63.158 2.10 1.68 0.00 4.63
222 233 2.437343 GCGACCGAAGCTTGACGAG 61.437 63.158 2.10 0.00 0.00 4.18
223 234 2.430244 GCGACCGAAGCTTGACGA 60.430 61.111 2.10 0.00 0.00 4.20
224 235 2.430921 AGCGACCGAAGCTTGACG 60.431 61.111 2.10 1.27 43.24 4.35
225 236 1.372997 TGAGCGACCGAAGCTTGAC 60.373 57.895 2.10 0.00 46.13 3.18
226 237 1.372997 GTGAGCGACCGAAGCTTGA 60.373 57.895 2.10 0.00 46.13 3.02
227 238 2.383527 GGTGAGCGACCGAAGCTTG 61.384 63.158 2.10 0.00 46.13 4.01
228 239 2.048127 GGTGAGCGACCGAAGCTT 60.048 61.111 0.00 0.00 46.13 3.74
236 247 3.591254 AAAGGCGAGGGTGAGCGAC 62.591 63.158 0.00 0.00 35.30 5.19
237 248 3.311110 AAAGGCGAGGGTGAGCGA 61.311 61.111 0.00 0.00 0.00 4.93
238 249 3.121030 CAAAGGCGAGGGTGAGCG 61.121 66.667 0.00 0.00 0.00 5.03
239 250 2.032681 ACAAAGGCGAGGGTGAGC 59.967 61.111 0.00 0.00 0.00 4.26
240 251 0.895530 TAGACAAAGGCGAGGGTGAG 59.104 55.000 0.00 0.00 0.00 3.51
241 252 0.606604 GTAGACAAAGGCGAGGGTGA 59.393 55.000 0.00 0.00 0.00 4.02
242 253 0.320374 TGTAGACAAAGGCGAGGGTG 59.680 55.000 0.00 0.00 0.00 4.61
243 254 0.608640 CTGTAGACAAAGGCGAGGGT 59.391 55.000 0.00 0.00 0.00 4.34
244 255 0.741221 GCTGTAGACAAAGGCGAGGG 60.741 60.000 0.00 0.00 0.00 4.30
245 256 0.741221 GGCTGTAGACAAAGGCGAGG 60.741 60.000 0.00 0.00 0.00 4.63
246 257 2.755929 GGCTGTAGACAAAGGCGAG 58.244 57.895 0.00 0.00 0.00 5.03
249 260 1.362406 GAGCGGCTGTAGACAAAGGC 61.362 60.000 7.50 0.00 35.72 4.35
250 261 0.247736 AGAGCGGCTGTAGACAAAGG 59.752 55.000 7.50 0.00 0.00 3.11
251 262 1.203523 AGAGAGCGGCTGTAGACAAAG 59.796 52.381 7.50 0.00 0.00 2.77
252 263 1.202582 GAGAGAGCGGCTGTAGACAAA 59.797 52.381 7.50 0.00 0.00 2.83
253 264 0.811915 GAGAGAGCGGCTGTAGACAA 59.188 55.000 7.50 0.00 0.00 3.18
254 265 1.032657 GGAGAGAGCGGCTGTAGACA 61.033 60.000 7.50 0.00 0.00 3.41
255 266 0.750182 AGGAGAGAGCGGCTGTAGAC 60.750 60.000 7.50 0.00 0.00 2.59
256 267 0.464735 GAGGAGAGAGCGGCTGTAGA 60.465 60.000 7.50 0.00 0.00 2.59
257 268 1.781025 CGAGGAGAGAGCGGCTGTAG 61.781 65.000 7.50 0.00 0.00 2.74
258 269 1.820056 CGAGGAGAGAGCGGCTGTA 60.820 63.158 7.50 0.00 0.00 2.74
259 270 3.137459 CGAGGAGAGAGCGGCTGT 61.137 66.667 7.50 1.89 0.00 4.40
260 271 2.826287 TCGAGGAGAGAGCGGCTG 60.826 66.667 7.50 0.00 0.00 4.85
269 280 0.387202 GCTGCTATTGCTCGAGGAGA 59.613 55.000 15.58 2.37 40.48 3.71
270 281 0.938637 CGCTGCTATTGCTCGAGGAG 60.939 60.000 15.58 0.37 40.48 3.69
271 282 1.066422 CGCTGCTATTGCTCGAGGA 59.934 57.895 15.58 9.02 40.48 3.71
272 283 0.807667 AACGCTGCTATTGCTCGAGG 60.808 55.000 15.58 0.00 40.48 4.63
273 284 0.299895 CAACGCTGCTATTGCTCGAG 59.700 55.000 8.45 8.45 40.48 4.04
274 285 1.695893 GCAACGCTGCTATTGCTCGA 61.696 55.000 23.24 0.00 46.21 4.04
275 286 1.297158 GCAACGCTGCTATTGCTCG 60.297 57.895 23.24 11.14 46.21 5.03
276 287 4.678396 GCAACGCTGCTATTGCTC 57.322 55.556 23.24 4.17 46.21 4.26
285 296 0.163788 CGTTTGAGTAGGCAACGCTG 59.836 55.000 0.00 0.00 46.39 5.18
286 297 0.949105 CCGTTTGAGTAGGCAACGCT 60.949 55.000 0.55 0.00 46.39 5.07
287 298 1.226030 ACCGTTTGAGTAGGCAACGC 61.226 55.000 0.55 0.00 46.39 4.84
288 299 0.788391 GACCGTTTGAGTAGGCAACG 59.212 55.000 0.00 0.00 46.39 4.10
289 300 1.873698 TGACCGTTTGAGTAGGCAAC 58.126 50.000 0.00 0.00 0.00 4.17
290 301 2.614983 GTTTGACCGTTTGAGTAGGCAA 59.385 45.455 0.00 0.00 0.00 4.52
291 302 2.215196 GTTTGACCGTTTGAGTAGGCA 58.785 47.619 0.00 0.00 0.00 4.75
292 303 1.193874 CGTTTGACCGTTTGAGTAGGC 59.806 52.381 0.00 0.00 0.00 3.93
293 304 1.193874 GCGTTTGACCGTTTGAGTAGG 59.806 52.381 0.00 0.00 0.00 3.18
294 305 1.193874 GGCGTTTGACCGTTTGAGTAG 59.806 52.381 0.00 0.00 0.00 2.57
295 306 1.219646 GGCGTTTGACCGTTTGAGTA 58.780 50.000 0.00 0.00 0.00 2.59
296 307 1.768112 CGGCGTTTGACCGTTTGAGT 61.768 55.000 0.00 0.00 45.70 3.41
297 308 1.083015 CGGCGTTTGACCGTTTGAG 60.083 57.895 0.00 0.00 45.70 3.02
298 309 3.015677 CGGCGTTTGACCGTTTGA 58.984 55.556 0.00 0.00 45.70 2.69
304 315 4.337060 GTTGGCCGGCGTTTGACC 62.337 66.667 22.54 4.79 0.00 4.02
305 316 4.676586 CGTTGGCCGGCGTTTGAC 62.677 66.667 22.54 12.78 0.00 3.18
328 339 4.200283 CTGAGGAGGGCGAGCGTC 62.200 72.222 0.00 0.00 0.00 5.19
336 347 4.168291 GAAGGCGCCTGAGGAGGG 62.168 72.222 33.60 0.00 40.19 4.30
337 348 4.521062 CGAAGGCGCCTGAGGAGG 62.521 72.222 33.60 11.93 43.19 4.30
369 380 1.817099 CTCGATCTGTGCCCCAAGC 60.817 63.158 0.00 0.00 44.14 4.01
370 381 1.817099 GCTCGATCTGTGCCCCAAG 60.817 63.158 0.00 0.00 0.00 3.61
371 382 2.268920 GCTCGATCTGTGCCCCAA 59.731 61.111 0.00 0.00 0.00 4.12
376 387 1.153745 AACTCGGCTCGATCTGTGC 60.154 57.895 0.00 0.00 34.61 4.57
377 388 0.171231 TCAACTCGGCTCGATCTGTG 59.829 55.000 0.00 0.00 34.61 3.66
378 389 0.453793 CTCAACTCGGCTCGATCTGT 59.546 55.000 0.00 0.00 34.61 3.41
379 390 0.735471 TCTCAACTCGGCTCGATCTG 59.265 55.000 0.00 0.00 34.61 2.90
380 391 1.021202 CTCTCAACTCGGCTCGATCT 58.979 55.000 0.00 0.00 34.61 2.75
381 392 0.030101 CCTCTCAACTCGGCTCGATC 59.970 60.000 0.00 0.00 34.61 3.69
382 393 2.010582 GCCTCTCAACTCGGCTCGAT 62.011 60.000 0.00 0.00 40.62 3.59
383 394 2.701780 GCCTCTCAACTCGGCTCGA 61.702 63.158 0.00 0.00 40.62 4.04
384 395 2.202676 GCCTCTCAACTCGGCTCG 60.203 66.667 0.00 0.00 40.62 5.03
385 396 1.446966 GTGCCTCTCAACTCGGCTC 60.447 63.158 0.00 0.00 44.09 4.70
386 397 2.659610 GTGCCTCTCAACTCGGCT 59.340 61.111 0.00 0.00 44.09 5.52
387 398 2.811317 CGTGCCTCTCAACTCGGC 60.811 66.667 0.00 0.00 44.02 5.54
388 399 2.811317 GCGTGCCTCTCAACTCGG 60.811 66.667 0.00 0.00 0.00 4.63
389 400 3.175240 CGCGTGCCTCTCAACTCG 61.175 66.667 0.00 0.00 0.00 4.18
390 401 1.803519 CTCGCGTGCCTCTCAACTC 60.804 63.158 5.77 0.00 0.00 3.01
391 402 2.259818 CTCGCGTGCCTCTCAACT 59.740 61.111 5.77 0.00 0.00 3.16
392 403 2.811317 CCTCGCGTGCCTCTCAAC 60.811 66.667 5.77 0.00 0.00 3.18
393 404 3.303135 ACCTCGCGTGCCTCTCAA 61.303 61.111 5.77 0.00 0.00 3.02
394 405 4.056125 CACCTCGCGTGCCTCTCA 62.056 66.667 5.77 0.00 35.18 3.27
410 421 5.714689 CTGAAACAGAAGCTCCTCGAGCA 62.715 52.174 15.54 0.00 44.98 4.26
411 422 3.242964 CTGAAACAGAAGCTCCTCGAGC 61.243 54.545 6.99 5.49 43.88 5.03
412 423 2.605030 CTGAAACAGAAGCTCCTCGAG 58.395 52.381 5.13 5.13 32.44 4.04
413 424 1.273606 CCTGAAACAGAAGCTCCTCGA 59.726 52.381 0.00 0.00 32.44 4.04
414 425 1.719600 CCTGAAACAGAAGCTCCTCG 58.280 55.000 0.00 0.00 32.44 4.63
415 426 1.271054 TGCCTGAAACAGAAGCTCCTC 60.271 52.381 0.00 0.00 32.44 3.71
416 427 0.767375 TGCCTGAAACAGAAGCTCCT 59.233 50.000 0.00 0.00 32.44 3.69
417 428 1.609208 TTGCCTGAAACAGAAGCTCC 58.391 50.000 0.00 0.00 32.44 4.70
418 429 2.030451 CCTTTGCCTGAAACAGAAGCTC 60.030 50.000 0.00 0.00 32.44 4.09
419 430 1.959282 CCTTTGCCTGAAACAGAAGCT 59.041 47.619 0.00 0.00 32.44 3.74
420 431 1.000171 CCCTTTGCCTGAAACAGAAGC 60.000 52.381 0.00 0.00 32.44 3.86
421 432 2.035066 CACCCTTTGCCTGAAACAGAAG 59.965 50.000 0.00 0.00 32.44 2.85
422 433 2.031120 CACCCTTTGCCTGAAACAGAA 58.969 47.619 0.00 0.00 32.44 3.02
423 434 1.214175 TCACCCTTTGCCTGAAACAGA 59.786 47.619 0.00 0.00 32.44 3.41
424 435 1.610522 CTCACCCTTTGCCTGAAACAG 59.389 52.381 0.00 0.00 0.00 3.16
425 436 1.214175 TCTCACCCTTTGCCTGAAACA 59.786 47.619 0.00 0.00 0.00 2.83
426 437 1.981256 TCTCACCCTTTGCCTGAAAC 58.019 50.000 0.00 0.00 0.00 2.78
427 438 2.517959 CATCTCACCCTTTGCCTGAAA 58.482 47.619 0.00 0.00 0.00 2.69
428 439 1.887956 GCATCTCACCCTTTGCCTGAA 60.888 52.381 0.00 0.00 0.00 3.02
429 440 0.322816 GCATCTCACCCTTTGCCTGA 60.323 55.000 0.00 0.00 0.00 3.86
430 441 0.609957 TGCATCTCACCCTTTGCCTG 60.610 55.000 0.00 0.00 34.20 4.85
431 442 0.323178 CTGCATCTCACCCTTTGCCT 60.323 55.000 0.00 0.00 34.20 4.75
432 443 1.941999 GCTGCATCTCACCCTTTGCC 61.942 60.000 0.00 0.00 34.20 4.52
433 444 1.509923 GCTGCATCTCACCCTTTGC 59.490 57.895 0.00 0.00 35.67 3.68
434 445 0.674581 TCGCTGCATCTCACCCTTTG 60.675 55.000 0.00 0.00 0.00 2.77
435 446 0.036732 TTCGCTGCATCTCACCCTTT 59.963 50.000 0.00 0.00 0.00 3.11
436 447 0.392193 CTTCGCTGCATCTCACCCTT 60.392 55.000 0.00 0.00 0.00 3.95
437 448 1.220206 CTTCGCTGCATCTCACCCT 59.780 57.895 0.00 0.00 0.00 4.34
438 449 0.391661 TTCTTCGCTGCATCTCACCC 60.392 55.000 0.00 0.00 0.00 4.61
439 450 1.442769 TTTCTTCGCTGCATCTCACC 58.557 50.000 0.00 0.00 0.00 4.02
440 451 2.723010 CGTTTTCTTCGCTGCATCTCAC 60.723 50.000 0.00 0.00 0.00 3.51
441 452 1.460743 CGTTTTCTTCGCTGCATCTCA 59.539 47.619 0.00 0.00 0.00 3.27
442 453 1.726791 TCGTTTTCTTCGCTGCATCTC 59.273 47.619 0.00 0.00 0.00 2.75
443 454 1.795768 TCGTTTTCTTCGCTGCATCT 58.204 45.000 0.00 0.00 0.00 2.90
444 455 2.813779 ATCGTTTTCTTCGCTGCATC 57.186 45.000 0.00 0.00 0.00 3.91
445 456 2.474526 CGAATCGTTTTCTTCGCTGCAT 60.475 45.455 0.00 0.00 37.96 3.96
446 457 1.136363 CGAATCGTTTTCTTCGCTGCA 60.136 47.619 0.00 0.00 37.96 4.41
447 458 1.514136 CGAATCGTTTTCTTCGCTGC 58.486 50.000 0.00 0.00 37.96 5.25
451 462 1.843194 GCTCGCGAATCGTTTTCTTCG 60.843 52.381 11.33 0.00 45.27 3.79
452 463 1.390463 AGCTCGCGAATCGTTTTCTTC 59.610 47.619 11.33 0.00 39.67 2.87
453 464 1.390463 GAGCTCGCGAATCGTTTTCTT 59.610 47.619 11.33 0.00 39.67 2.52
454 465 0.992802 GAGCTCGCGAATCGTTTTCT 59.007 50.000 11.33 0.00 39.67 2.52
455 466 0.025128 GGAGCTCGCGAATCGTTTTC 59.975 55.000 11.33 0.12 39.67 2.29
456 467 1.683790 CGGAGCTCGCGAATCGTTTT 61.684 55.000 11.33 0.00 39.67 2.43
457 468 2.158959 CGGAGCTCGCGAATCGTTT 61.159 57.895 11.33 0.00 39.67 3.60
458 469 2.579787 CGGAGCTCGCGAATCGTT 60.580 61.111 11.33 0.00 39.67 3.85
459 470 3.812019 ACGGAGCTCGCGAATCGT 61.812 61.111 25.01 17.04 43.89 3.73
460 471 3.315521 CACGGAGCTCGCGAATCG 61.316 66.667 25.01 16.46 43.89 3.34
461 472 2.956964 CCACGGAGCTCGCGAATC 60.957 66.667 25.01 11.45 43.89 2.52
462 473 3.296709 AACCACGGAGCTCGCGAAT 62.297 57.895 25.01 0.62 43.89 3.34
463 474 3.986006 AACCACGGAGCTCGCGAA 61.986 61.111 25.01 0.00 43.89 4.70
464 475 4.717629 CAACCACGGAGCTCGCGA 62.718 66.667 25.01 9.26 43.89 5.87
478 489 0.531974 TTCTCGCGGATATGGGCAAC 60.532 55.000 6.13 0.00 0.00 4.17
479 490 0.396435 ATTCTCGCGGATATGGGCAA 59.604 50.000 6.13 0.00 0.00 4.52
480 491 0.037326 GATTCTCGCGGATATGGGCA 60.037 55.000 6.13 0.00 0.00 5.36
481 492 0.247736 AGATTCTCGCGGATATGGGC 59.752 55.000 6.13 0.00 0.00 5.36
482 493 1.134965 GGAGATTCTCGCGGATATGGG 60.135 57.143 6.13 0.00 0.00 4.00
483 494 1.134965 GGGAGATTCTCGCGGATATGG 60.135 57.143 14.14 0.00 34.01 2.74
484 495 2.285827 GGGAGATTCTCGCGGATATG 57.714 55.000 14.14 0.00 34.01 1.78
491 502 0.591741 CACGTACGGGAGATTCTCGC 60.592 60.000 21.06 18.20 45.98 5.03
493 504 0.591741 CGCACGTACGGGAGATTCTC 60.592 60.000 24.33 5.03 0.00 2.87
494 505 1.432251 CGCACGTACGGGAGATTCT 59.568 57.895 24.33 0.00 0.00 2.40
495 506 3.993103 CGCACGTACGGGAGATTC 58.007 61.111 24.33 1.17 0.00 2.52
504 515 3.711541 AATCCGGCTCCGCACGTAC 62.712 63.158 0.00 0.00 38.24 3.67
505 516 2.510064 AAAATCCGGCTCCGCACGTA 62.510 55.000 0.00 0.00 38.24 3.57
506 517 3.894547 AAAATCCGGCTCCGCACGT 62.895 57.895 0.00 0.00 38.24 4.49
507 518 3.095898 GAAAATCCGGCTCCGCACG 62.096 63.158 0.00 0.00 38.24 5.34
508 519 1.582610 TTGAAAATCCGGCTCCGCAC 61.583 55.000 0.00 0.00 38.24 5.34
509 520 1.302913 TTGAAAATCCGGCTCCGCA 60.303 52.632 0.00 0.00 38.24 5.69
510 521 1.136774 GTTGAAAATCCGGCTCCGC 59.863 57.895 0.00 0.00 38.24 5.54
511 522 1.017177 TCGTTGAAAATCCGGCTCCG 61.017 55.000 0.00 0.48 39.44 4.63
512 523 1.161843 TTCGTTGAAAATCCGGCTCC 58.838 50.000 0.00 0.00 0.00 4.70
513 524 4.813296 ATATTCGTTGAAAATCCGGCTC 57.187 40.909 0.00 0.00 0.00 4.70
514 525 4.036380 GGAATATTCGTTGAAAATCCGGCT 59.964 41.667 9.32 0.00 0.00 5.52
515 526 4.201970 TGGAATATTCGTTGAAAATCCGGC 60.202 41.667 9.32 0.00 29.93 6.13
516 527 5.493133 TGGAATATTCGTTGAAAATCCGG 57.507 39.130 9.32 0.00 29.93 5.14
517 528 5.295787 TCCTGGAATATTCGTTGAAAATCCG 59.704 40.000 9.32 0.00 29.93 4.18
518 529 6.693315 TCCTGGAATATTCGTTGAAAATCC 57.307 37.500 9.32 0.00 0.00 3.01
519 530 8.624776 AGATTCCTGGAATATTCGTTGAAAATC 58.375 33.333 21.39 11.95 31.89 2.17
520 531 8.408601 CAGATTCCTGGAATATTCGTTGAAAAT 58.591 33.333 21.39 4.70 36.77 1.82
521 532 7.761409 CAGATTCCTGGAATATTCGTTGAAAA 58.239 34.615 21.39 0.32 36.77 2.29
522 533 7.320443 CAGATTCCTGGAATATTCGTTGAAA 57.680 36.000 21.39 1.28 36.77 2.69
523 534 6.925610 CAGATTCCTGGAATATTCGTTGAA 57.074 37.500 21.39 10.88 36.77 2.69
546 557 3.526534 GCGAGAAAGGATATGGATAGCC 58.473 50.000 0.00 0.00 39.07 3.93
547 558 3.526534 GGCGAGAAAGGATATGGATAGC 58.473 50.000 0.00 0.00 0.00 2.97
548 559 3.515502 TGGGCGAGAAAGGATATGGATAG 59.484 47.826 0.00 0.00 0.00 2.08
549 560 3.516586 TGGGCGAGAAAGGATATGGATA 58.483 45.455 0.00 0.00 0.00 2.59
550 561 2.338809 TGGGCGAGAAAGGATATGGAT 58.661 47.619 0.00 0.00 0.00 3.41
551 562 1.801242 TGGGCGAGAAAGGATATGGA 58.199 50.000 0.00 0.00 0.00 3.41
552 563 2.038952 TCATGGGCGAGAAAGGATATGG 59.961 50.000 0.00 0.00 0.00 2.74
553 564 3.407424 TCATGGGCGAGAAAGGATATG 57.593 47.619 0.00 0.00 0.00 1.78
554 565 3.496870 GGTTCATGGGCGAGAAAGGATAT 60.497 47.826 0.00 0.00 0.00 1.63
555 566 2.158813 GGTTCATGGGCGAGAAAGGATA 60.159 50.000 0.00 0.00 0.00 2.59
556 567 1.408822 GGTTCATGGGCGAGAAAGGAT 60.409 52.381 0.00 0.00 0.00 3.24
557 568 0.035439 GGTTCATGGGCGAGAAAGGA 60.035 55.000 0.00 0.00 0.00 3.36
558 569 0.322456 TGGTTCATGGGCGAGAAAGG 60.322 55.000 0.00 0.00 0.00 3.11
559 570 1.533625 TTGGTTCATGGGCGAGAAAG 58.466 50.000 0.00 0.00 0.00 2.62
560 571 1.611491 GTTTGGTTCATGGGCGAGAAA 59.389 47.619 0.00 0.00 0.00 2.52
561 572 1.243902 GTTTGGTTCATGGGCGAGAA 58.756 50.000 0.00 0.00 0.00 2.87
562 573 0.953471 CGTTTGGTTCATGGGCGAGA 60.953 55.000 0.00 0.00 0.00 4.04
563 574 1.501741 CGTTTGGTTCATGGGCGAG 59.498 57.895 0.00 0.00 0.00 5.03
564 575 2.622011 GCGTTTGGTTCATGGGCGA 61.622 57.895 0.00 0.00 0.00 5.54
565 576 2.126502 GCGTTTGGTTCATGGGCG 60.127 61.111 0.00 0.00 0.00 6.13
566 577 2.261361 GGCGTTTGGTTCATGGGC 59.739 61.111 0.00 0.00 0.00 5.36
567 578 1.586028 CAGGCGTTTGGTTCATGGG 59.414 57.895 0.00 0.00 0.00 4.00
568 579 1.586028 CCAGGCGTTTGGTTCATGG 59.414 57.895 0.00 0.00 33.38 3.66
604 615 1.834822 AGCGAGGACAGGGATAGCC 60.835 63.158 0.00 0.00 0.00 3.93
605 616 1.365633 CAGCGAGGACAGGGATAGC 59.634 63.158 0.00 0.00 0.00 2.97
606 617 1.467678 CCCAGCGAGGACAGGGATAG 61.468 65.000 0.00 0.00 44.30 2.08
607 618 1.457643 CCCAGCGAGGACAGGGATA 60.458 63.158 0.00 0.00 44.30 2.59
608 619 2.765807 CCCAGCGAGGACAGGGAT 60.766 66.667 0.00 0.00 44.30 3.85
611 622 2.093537 GATAGCCCAGCGAGGACAGG 62.094 65.000 0.00 0.00 41.22 4.00
612 623 1.365633 GATAGCCCAGCGAGGACAG 59.634 63.158 0.00 0.00 41.22 3.51
613 624 2.134287 GGATAGCCCAGCGAGGACA 61.134 63.158 0.00 0.00 41.22 4.02
614 625 2.737830 GGATAGCCCAGCGAGGAC 59.262 66.667 0.00 0.00 41.22 3.85
624 635 0.750546 GTTTGGTTCCCGGGATAGCC 60.751 60.000 27.48 25.56 0.00 3.93
625 636 1.093496 CGTTTGGTTCCCGGGATAGC 61.093 60.000 27.48 23.36 0.00 2.97
626 637 1.093496 GCGTTTGGTTCCCGGGATAG 61.093 60.000 27.48 11.59 0.00 2.08
627 638 1.078285 GCGTTTGGTTCCCGGGATA 60.078 57.895 27.48 12.91 0.00 2.59
628 639 2.360726 GCGTTTGGTTCCCGGGAT 60.361 61.111 27.48 0.00 0.00 3.85
629 640 3.198953 ATGCGTTTGGTTCCCGGGA 62.199 57.895 22.63 22.63 0.00 5.14
630 641 2.675075 ATGCGTTTGGTTCCCGGG 60.675 61.111 16.85 16.85 0.00 5.73
631 642 1.969064 TGATGCGTTTGGTTCCCGG 60.969 57.895 0.00 0.00 0.00 5.73
632 643 1.209127 GTGATGCGTTTGGTTCCCG 59.791 57.895 0.00 0.00 0.00 5.14
633 644 0.671251 TTGTGATGCGTTTGGTTCCC 59.329 50.000 0.00 0.00 0.00 3.97
634 645 1.930371 GCTTGTGATGCGTTTGGTTCC 60.930 52.381 0.00 0.00 0.00 3.62
635 646 1.408422 GCTTGTGATGCGTTTGGTTC 58.592 50.000 0.00 0.00 0.00 3.62
636 647 3.568093 GCTTGTGATGCGTTTGGTT 57.432 47.368 0.00 0.00 0.00 3.67
648 659 2.124693 AAACCCACACCCGCTTGTG 61.125 57.895 7.47 7.47 45.57 3.33
649 660 2.124693 CAAACCCACACCCGCTTGT 61.125 57.895 0.00 0.00 0.00 3.16
650 661 2.727544 CAAACCCACACCCGCTTG 59.272 61.111 0.00 0.00 0.00 4.01
651 662 3.223589 GCAAACCCACACCCGCTT 61.224 61.111 0.00 0.00 0.00 4.68
654 665 4.939368 TCCGCAAACCCACACCCG 62.939 66.667 0.00 0.00 0.00 5.28
655 666 3.292159 GTCCGCAAACCCACACCC 61.292 66.667 0.00 0.00 0.00 4.61
656 667 3.656045 CGTCCGCAAACCCACACC 61.656 66.667 0.00 0.00 0.00 4.16
657 668 3.656045 CCGTCCGCAAACCCACAC 61.656 66.667 0.00 0.00 0.00 3.82
684 695 2.717639 AAACATAGCCAGTGCCTAGG 57.282 50.000 3.67 3.67 38.69 3.02
685 696 4.095483 CAGAAAAACATAGCCAGTGCCTAG 59.905 45.833 0.00 0.00 38.69 3.02
686 697 4.009675 CAGAAAAACATAGCCAGTGCCTA 58.990 43.478 0.00 0.00 38.69 3.93
687 698 2.821969 CAGAAAAACATAGCCAGTGCCT 59.178 45.455 0.00 0.00 38.69 4.75
688 699 2.558359 ACAGAAAAACATAGCCAGTGCC 59.442 45.455 0.00 0.00 38.69 5.01
695 706 4.829064 TCACCACACAGAAAAACATAGC 57.171 40.909 0.00 0.00 0.00 2.97
738 749 1.163420 ACCATGCTCGCGTCAAAACA 61.163 50.000 5.77 0.00 0.00 2.83
739 750 0.040425 AACCATGCTCGCGTCAAAAC 60.040 50.000 5.77 0.00 0.00 2.43
779 790 2.654749 TGCGAACATAGTCTGACAGG 57.345 50.000 10.88 1.38 0.00 4.00
788 799 5.418310 ACCCGAAAATATTGCGAACATAG 57.582 39.130 11.31 0.00 0.00 2.23
809 820 4.095036 GGGCTGAAGTTCATTTACTGCTAC 59.905 45.833 5.91 0.00 0.00 3.58
810 821 4.019321 AGGGCTGAAGTTCATTTACTGCTA 60.019 41.667 5.91 0.00 0.00 3.49
867 878 1.552348 GACACACGCACTCTGACAGC 61.552 60.000 0.00 0.00 0.00 4.40
889 900 4.574674 TTATGGGCTTTGAGACTGTGAT 57.425 40.909 0.00 0.00 0.00 3.06
914 925 3.164268 CATCTGGATGCTCTAGCTACCT 58.836 50.000 15.05 0.00 42.66 3.08
915 926 3.591196 CATCTGGATGCTCTAGCTACC 57.409 52.381 3.26 7.19 42.66 3.18
1134 1150 0.816825 CGGCCATCACCCTGAAGATG 60.817 60.000 2.24 0.00 40.94 2.90
1264 1280 3.319198 GAAGTGGAGGCGGGTGGA 61.319 66.667 0.00 0.00 0.00 4.02
1368 1384 1.296715 GAAGCAGCCGAAGAGGGAA 59.703 57.895 0.00 0.00 41.48 3.97
1706 1792 2.570415 TCTCCTCCGGTATCTGCTAG 57.430 55.000 0.00 0.00 0.00 3.42
1707 1793 3.157881 CAATCTCCTCCGGTATCTGCTA 58.842 50.000 0.00 0.00 0.00 3.49
1874 1982 1.265236 ACACCAGCTCCTTCAGAGAG 58.735 55.000 0.00 0.00 46.50 3.20
2022 2130 4.680237 CACCTGGAGCCGACGCAA 62.680 66.667 0.00 0.00 37.52 4.85
2054 2162 4.740822 GGCCCCGTCAGGTTGCAT 62.741 66.667 0.00 0.00 35.72 3.96
2324 2432 4.228567 GGCGCCCTGAGGTAGCTC 62.229 72.222 18.11 15.12 38.47 4.09
2445 2582 1.269723 TCACAGCTCGAGTACCAACAG 59.730 52.381 15.13 0.00 0.00 3.16
2533 2695 1.014352 GGAACGTTCATCCAATCGGG 58.986 55.000 28.24 0.00 36.92 5.14
2561 2724 2.434185 GCGATCGAACCAGGTGCA 60.434 61.111 21.57 0.00 0.00 4.57
2570 2733 1.065851 TGTGCCTATAACGCGATCGAA 59.934 47.619 21.57 0.31 39.41 3.71
2632 2795 7.255695 GGGTGTTAAAAGGTGCTAAAATGTAGT 60.256 37.037 0.00 0.00 0.00 2.73
2634 2797 6.778559 AGGGTGTTAAAAGGTGCTAAAATGTA 59.221 34.615 0.00 0.00 0.00 2.29
2635 2798 5.600898 AGGGTGTTAAAAGGTGCTAAAATGT 59.399 36.000 0.00 0.00 0.00 2.71
2636 2799 6.096673 AGGGTGTTAAAAGGTGCTAAAATG 57.903 37.500 0.00 0.00 0.00 2.32
2637 2800 5.245301 GGAGGGTGTTAAAAGGTGCTAAAAT 59.755 40.000 0.00 0.00 0.00 1.82
2646 2809 2.156917 GGAACGGAGGGTGTTAAAAGG 58.843 52.381 0.00 0.00 0.00 3.11
2651 2814 3.512219 AATTTGGAACGGAGGGTGTTA 57.488 42.857 0.00 0.00 0.00 2.41
2653 2816 2.374170 AGTAATTTGGAACGGAGGGTGT 59.626 45.455 0.00 0.00 0.00 4.16
2654 2817 3.067684 AGTAATTTGGAACGGAGGGTG 57.932 47.619 0.00 0.00 0.00 4.61
2655 2818 3.181437 ACAAGTAATTTGGAACGGAGGGT 60.181 43.478 0.00 0.00 41.25 4.34
2656 2819 3.190535 CACAAGTAATTTGGAACGGAGGG 59.809 47.826 0.00 0.00 41.25 4.30
2657 2820 4.069304 TCACAAGTAATTTGGAACGGAGG 58.931 43.478 0.00 0.00 41.25 4.30
2658 2821 5.682943 TTCACAAGTAATTTGGAACGGAG 57.317 39.130 0.00 0.00 41.25 4.63
2659 2822 6.442952 CATTTCACAAGTAATTTGGAACGGA 58.557 36.000 0.00 0.00 41.25 4.69
2660 2823 5.633182 CCATTTCACAAGTAATTTGGAACGG 59.367 40.000 0.00 0.00 41.25 4.44
2661 2824 6.212955 ACCATTTCACAAGTAATTTGGAACG 58.787 36.000 0.00 0.00 41.25 3.95
2662 2825 7.494298 ACAACCATTTCACAAGTAATTTGGAAC 59.506 33.333 0.00 0.00 41.25 3.62
2663 2826 7.560368 ACAACCATTTCACAAGTAATTTGGAA 58.440 30.769 0.00 0.00 41.25 3.53
2664 2827 7.118496 ACAACCATTTCACAAGTAATTTGGA 57.882 32.000 0.00 0.00 41.25 3.53
2665 2828 9.139174 GATACAACCATTTCACAAGTAATTTGG 57.861 33.333 0.00 0.00 41.25 3.28
2666 2829 9.912634 AGATACAACCATTTCACAAGTAATTTG 57.087 29.630 0.00 0.00 42.68 2.32
2669 2832 9.396022 CCTAGATACAACCATTTCACAAGTAAT 57.604 33.333 0.00 0.00 0.00 1.89
2670 2833 8.598916 TCCTAGATACAACCATTTCACAAGTAA 58.401 33.333 0.00 0.00 0.00 2.24
2671 2834 8.141298 TCCTAGATACAACCATTTCACAAGTA 57.859 34.615 0.00 0.00 0.00 2.24
2672 2835 7.016153 TCCTAGATACAACCATTTCACAAGT 57.984 36.000 0.00 0.00 0.00 3.16
2673 2836 7.921786 TTCCTAGATACAACCATTTCACAAG 57.078 36.000 0.00 0.00 0.00 3.16
2674 2837 7.339212 CCATTCCTAGATACAACCATTTCACAA 59.661 37.037 0.00 0.00 0.00 3.33
2675 2838 6.828273 CCATTCCTAGATACAACCATTTCACA 59.172 38.462 0.00 0.00 0.00 3.58
2676 2839 6.263168 CCCATTCCTAGATACAACCATTTCAC 59.737 42.308 0.00 0.00 0.00 3.18
2677 2840 6.364701 CCCATTCCTAGATACAACCATTTCA 58.635 40.000 0.00 0.00 0.00 2.69
2678 2841 5.770162 CCCCATTCCTAGATACAACCATTTC 59.230 44.000 0.00 0.00 0.00 2.17
2679 2842 5.195756 ACCCCATTCCTAGATACAACCATTT 59.804 40.000 0.00 0.00 0.00 2.32
2680 2843 4.731929 ACCCCATTCCTAGATACAACCATT 59.268 41.667 0.00 0.00 0.00 3.16
2681 2844 4.104738 CACCCCATTCCTAGATACAACCAT 59.895 45.833 0.00 0.00 0.00 3.55
2682 2845 3.458118 CACCCCATTCCTAGATACAACCA 59.542 47.826 0.00 0.00 0.00 3.67
2683 2846 3.714798 TCACCCCATTCCTAGATACAACC 59.285 47.826 0.00 0.00 0.00 3.77
2684 2847 4.163458 TGTCACCCCATTCCTAGATACAAC 59.837 45.833 0.00 0.00 0.00 3.32
2685 2848 4.367166 TGTCACCCCATTCCTAGATACAA 58.633 43.478 0.00 0.00 0.00 2.41
2686 2849 4.002256 TGTCACCCCATTCCTAGATACA 57.998 45.455 0.00 0.00 0.00 2.29
2687 2850 5.367945 TTTGTCACCCCATTCCTAGATAC 57.632 43.478 0.00 0.00 0.00 2.24
2688 2851 7.349859 AGTTATTTGTCACCCCATTCCTAGATA 59.650 37.037 0.00 0.00 0.00 1.98
2689 2852 6.160459 AGTTATTTGTCACCCCATTCCTAGAT 59.840 38.462 0.00 0.00 0.00 1.98
2690 2853 5.491078 AGTTATTTGTCACCCCATTCCTAGA 59.509 40.000 0.00 0.00 0.00 2.43
2691 2854 5.755849 AGTTATTTGTCACCCCATTCCTAG 58.244 41.667 0.00 0.00 0.00 3.02
2692 2855 5.628200 CGAGTTATTTGTCACCCCATTCCTA 60.628 44.000 0.00 0.00 0.00 2.94
2693 2856 4.600062 GAGTTATTTGTCACCCCATTCCT 58.400 43.478 0.00 0.00 0.00 3.36
2694 2857 3.377172 CGAGTTATTTGTCACCCCATTCC 59.623 47.826 0.00 0.00 0.00 3.01
2695 2858 3.181500 GCGAGTTATTTGTCACCCCATTC 60.181 47.826 0.00 0.00 0.00 2.67
2696 2859 2.752903 GCGAGTTATTTGTCACCCCATT 59.247 45.455 0.00 0.00 0.00 3.16
2697 2860 2.365582 GCGAGTTATTTGTCACCCCAT 58.634 47.619 0.00 0.00 0.00 4.00
2698 2861 1.612199 GGCGAGTTATTTGTCACCCCA 60.612 52.381 0.00 0.00 0.00 4.96
2699 2862 1.092348 GGCGAGTTATTTGTCACCCC 58.908 55.000 0.00 0.00 0.00 4.95
2700 2863 1.737793 CAGGCGAGTTATTTGTCACCC 59.262 52.381 0.00 0.00 0.00 4.61
2701 2864 2.695359 TCAGGCGAGTTATTTGTCACC 58.305 47.619 0.00 0.00 0.00 4.02
2702 2865 4.946784 ATTCAGGCGAGTTATTTGTCAC 57.053 40.909 0.00 0.00 0.00 3.67
2703 2866 6.170506 AGTAATTCAGGCGAGTTATTTGTCA 58.829 36.000 0.00 0.00 0.00 3.58
2704 2867 6.663944 AGTAATTCAGGCGAGTTATTTGTC 57.336 37.500 0.00 0.00 0.00 3.18
2705 2868 6.430000 ACAAGTAATTCAGGCGAGTTATTTGT 59.570 34.615 18.76 18.76 43.31 2.83
2706 2869 6.742718 CACAAGTAATTCAGGCGAGTTATTTG 59.257 38.462 17.99 17.99 42.11 2.32
2707 2870 6.653320 TCACAAGTAATTCAGGCGAGTTATTT 59.347 34.615 0.00 0.00 0.00 1.40
2708 2871 6.170506 TCACAAGTAATTCAGGCGAGTTATT 58.829 36.000 0.00 0.00 0.00 1.40
2709 2872 5.730550 TCACAAGTAATTCAGGCGAGTTAT 58.269 37.500 0.00 0.00 0.00 1.89
2710 2873 5.142061 TCACAAGTAATTCAGGCGAGTTA 57.858 39.130 0.00 0.00 0.00 2.24
2711 2874 4.002906 TCACAAGTAATTCAGGCGAGTT 57.997 40.909 0.00 0.00 0.00 3.01
2712 2875 3.678056 TCACAAGTAATTCAGGCGAGT 57.322 42.857 0.00 0.00 0.00 4.18
2713 2876 5.327091 CATTTCACAAGTAATTCAGGCGAG 58.673 41.667 0.00 0.00 0.00 5.03
2714 2877 4.155826 CCATTTCACAAGTAATTCAGGCGA 59.844 41.667 0.00 0.00 0.00 5.54
2715 2878 4.414852 CCATTTCACAAGTAATTCAGGCG 58.585 43.478 0.00 0.00 0.00 5.52
2716 2879 4.220602 ACCCATTTCACAAGTAATTCAGGC 59.779 41.667 0.00 0.00 0.00 4.85
2717 2880 5.982890 ACCCATTTCACAAGTAATTCAGG 57.017 39.130 0.00 0.00 0.00 3.86
2718 2881 9.757227 TTTTTACCCATTTCACAAGTAATTCAG 57.243 29.630 0.00 0.00 0.00 3.02
2721 2884 9.500785 CCATTTTTACCCATTTCACAAGTAATT 57.499 29.630 0.00 0.00 0.00 1.40
2722 2885 8.875168 TCCATTTTTACCCATTTCACAAGTAAT 58.125 29.630 0.00 0.00 0.00 1.89
2723 2886 8.251383 TCCATTTTTACCCATTTCACAAGTAA 57.749 30.769 0.00 0.00 0.00 2.24
2724 2887 7.841282 TCCATTTTTACCCATTTCACAAGTA 57.159 32.000 0.00 0.00 0.00 2.24
2725 2888 6.739331 TCCATTTTTACCCATTTCACAAGT 57.261 33.333 0.00 0.00 0.00 3.16
2726 2889 7.160726 ACATCCATTTTTACCCATTTCACAAG 58.839 34.615 0.00 0.00 0.00 3.16
2727 2890 7.072263 ACATCCATTTTTACCCATTTCACAA 57.928 32.000 0.00 0.00 0.00 3.33
2728 2891 6.678568 ACATCCATTTTTACCCATTTCACA 57.321 33.333 0.00 0.00 0.00 3.58
2729 2892 8.695456 AGATACATCCATTTTTACCCATTTCAC 58.305 33.333 0.00 0.00 0.00 3.18
2730 2893 8.837099 AGATACATCCATTTTTACCCATTTCA 57.163 30.769 0.00 0.00 0.00 2.69
2740 2903 9.359653 CCCTCATCTTTAGATACATCCATTTTT 57.640 33.333 0.00 0.00 32.63 1.94
2741 2904 8.506083 ACCCTCATCTTTAGATACATCCATTTT 58.494 33.333 0.00 0.00 32.63 1.82
2742 2905 7.941238 CACCCTCATCTTTAGATACATCCATTT 59.059 37.037 0.00 0.00 32.63 2.32
2743 2906 7.293299 TCACCCTCATCTTTAGATACATCCATT 59.707 37.037 0.00 0.00 32.63 3.16
2744 2907 6.789457 TCACCCTCATCTTTAGATACATCCAT 59.211 38.462 0.00 0.00 32.63 3.41
2745 2908 6.042093 GTCACCCTCATCTTTAGATACATCCA 59.958 42.308 0.00 0.00 32.63 3.41
2746 2909 6.042093 TGTCACCCTCATCTTTAGATACATCC 59.958 42.308 0.00 0.00 32.63 3.51
2747 2910 7.055667 TGTCACCCTCATCTTTAGATACATC 57.944 40.000 0.00 0.00 32.63 3.06
2748 2911 7.126421 ACTTGTCACCCTCATCTTTAGATACAT 59.874 37.037 0.00 0.00 32.63 2.29
2749 2912 6.440647 ACTTGTCACCCTCATCTTTAGATACA 59.559 38.462 0.00 0.00 32.63 2.29
2750 2913 6.879400 ACTTGTCACCCTCATCTTTAGATAC 58.121 40.000 0.00 0.00 32.63 2.24
2751 2914 8.475639 GTTACTTGTCACCCTCATCTTTAGATA 58.524 37.037 0.00 0.00 32.63 1.98
2752 2915 7.181125 AGTTACTTGTCACCCTCATCTTTAGAT 59.819 37.037 0.00 0.00 34.56 1.98
2753 2916 6.497259 AGTTACTTGTCACCCTCATCTTTAGA 59.503 38.462 0.00 0.00 0.00 2.10
2754 2917 6.702329 AGTTACTTGTCACCCTCATCTTTAG 58.298 40.000 0.00 0.00 0.00 1.85
2755 2918 6.681729 AGTTACTTGTCACCCTCATCTTTA 57.318 37.500 0.00 0.00 0.00 1.85
2756 2919 5.568620 AGTTACTTGTCACCCTCATCTTT 57.431 39.130 0.00 0.00 0.00 2.52
2757 2920 5.071788 TCAAGTTACTTGTCACCCTCATCTT 59.928 40.000 22.36 0.00 41.66 2.40
2758 2921 4.593206 TCAAGTTACTTGTCACCCTCATCT 59.407 41.667 22.36 0.00 41.66 2.90
2759 2922 4.894784 TCAAGTTACTTGTCACCCTCATC 58.105 43.478 22.36 0.00 41.66 2.92
2760 2923 4.974645 TCAAGTTACTTGTCACCCTCAT 57.025 40.909 22.36 0.00 41.66 2.90
2761 2924 4.764050 TTCAAGTTACTTGTCACCCTCA 57.236 40.909 22.36 0.28 41.66 3.86
2762 2925 5.763204 TCATTTCAAGTTACTTGTCACCCTC 59.237 40.000 22.36 0.00 41.66 4.30
2763 2926 5.690865 TCATTTCAAGTTACTTGTCACCCT 58.309 37.500 22.36 3.09 41.66 4.34
2764 2927 6.385649 TTCATTTCAAGTTACTTGTCACCC 57.614 37.500 22.36 0.00 41.66 4.61
2765 2928 6.262273 TCCTTCATTTCAAGTTACTTGTCACC 59.738 38.462 22.36 0.00 41.66 4.02
2766 2929 7.012421 ACTCCTTCATTTCAAGTTACTTGTCAC 59.988 37.037 22.36 0.00 41.66 3.67
2767 2930 7.054124 ACTCCTTCATTTCAAGTTACTTGTCA 58.946 34.615 22.36 12.05 41.66 3.58
2768 2931 7.497925 ACTCCTTCATTTCAAGTTACTTGTC 57.502 36.000 22.36 0.00 41.66 3.18
2800 2963 9.573133 CTCGTAGGAAGATGCAAATTTTATTTT 57.427 29.630 0.00 0.00 0.00 1.82
2801 2964 8.190784 CCTCGTAGGAAGATGCAAATTTTATTT 58.809 33.333 0.00 0.00 37.67 1.40
2802 2965 7.201821 CCCTCGTAGGAAGATGCAAATTTTATT 60.202 37.037 0.00 0.00 37.67 1.40
2803 2966 6.263168 CCCTCGTAGGAAGATGCAAATTTTAT 59.737 38.462 0.00 0.00 37.67 1.40
2804 2967 5.588648 CCCTCGTAGGAAGATGCAAATTTTA 59.411 40.000 0.00 0.00 37.67 1.52
2805 2968 4.399303 CCCTCGTAGGAAGATGCAAATTTT 59.601 41.667 0.00 0.00 37.67 1.82
2806 2969 3.947834 CCCTCGTAGGAAGATGCAAATTT 59.052 43.478 0.00 0.00 37.67 1.82
2807 2970 3.545703 CCCTCGTAGGAAGATGCAAATT 58.454 45.455 0.00 0.00 37.67 1.82
2808 2971 2.158755 CCCCTCGTAGGAAGATGCAAAT 60.159 50.000 0.00 0.00 37.67 2.32
2809 2972 1.209504 CCCCTCGTAGGAAGATGCAAA 59.790 52.381 0.00 0.00 37.67 3.68
2810 2973 0.830648 CCCCTCGTAGGAAGATGCAA 59.169 55.000 0.00 0.00 37.67 4.08
2811 2974 1.048724 CCCCCTCGTAGGAAGATGCA 61.049 60.000 0.00 0.00 37.67 3.96
2812 2975 1.049289 ACCCCCTCGTAGGAAGATGC 61.049 60.000 2.84 0.00 37.67 3.91
2813 2976 1.139058 CAACCCCCTCGTAGGAAGATG 59.861 57.143 2.84 0.00 37.67 2.90
2814 2977 1.007963 TCAACCCCCTCGTAGGAAGAT 59.992 52.381 2.84 0.00 37.67 2.40
2815 2978 0.410663 TCAACCCCCTCGTAGGAAGA 59.589 55.000 2.84 0.00 37.67 2.87
2816 2979 1.207329 CTTCAACCCCCTCGTAGGAAG 59.793 57.143 2.84 0.00 37.67 3.46
2817 2980 1.272807 CTTCAACCCCCTCGTAGGAA 58.727 55.000 2.84 0.00 37.67 3.36
2818 2981 0.616679 CCTTCAACCCCCTCGTAGGA 60.617 60.000 2.84 0.00 37.67 2.94
2819 2982 0.616679 TCCTTCAACCCCCTCGTAGG 60.617 60.000 0.00 0.00 34.30 3.18
2820 2983 1.272807 TTCCTTCAACCCCCTCGTAG 58.727 55.000 0.00 0.00 0.00 3.51
2821 2984 1.732117 TTTCCTTCAACCCCCTCGTA 58.268 50.000 0.00 0.00 0.00 3.43
2822 2985 1.073098 ATTTCCTTCAACCCCCTCGT 58.927 50.000 0.00 0.00 0.00 4.18
2823 2986 3.214328 CATATTTCCTTCAACCCCCTCG 58.786 50.000 0.00 0.00 0.00 4.63
2824 2987 2.959030 GCATATTTCCTTCAACCCCCTC 59.041 50.000 0.00 0.00 0.00 4.30
2825 2988 2.359249 GGCATATTTCCTTCAACCCCCT 60.359 50.000 0.00 0.00 0.00 4.79
2826 2989 2.039418 GGCATATTTCCTTCAACCCCC 58.961 52.381 0.00 0.00 0.00 5.40
2827 2990 2.039418 GGGCATATTTCCTTCAACCCC 58.961 52.381 0.00 0.00 0.00 4.95
2828 2991 3.032265 AGGGCATATTTCCTTCAACCC 57.968 47.619 0.00 0.00 36.29 4.11
2829 2992 5.048846 TCTAGGGCATATTTCCTTCAACC 57.951 43.478 0.00 0.00 34.75 3.77
2830 2993 5.066593 CCTCTAGGGCATATTTCCTTCAAC 58.933 45.833 0.00 0.00 34.75 3.18
3041 3206 7.490962 TGATGTGATCCCGTTAATCAAATAC 57.509 36.000 0.00 0.00 32.39 1.89
3176 3341 1.089112 GCACACGGGGGTTACATAAC 58.911 55.000 0.00 0.00 35.50 1.89
3402 3634 6.040166 ACTCGTTCTGTAATACATTATCCCGT 59.960 38.462 0.00 0.00 0.00 5.28
3409 3641 9.570488 GTCTCTTTACTCGTTCTGTAATACATT 57.430 33.333 0.00 0.00 31.13 2.71


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.