>input_sequence_50732
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-------------------------------------------------------ATGGCTTCTTCTTCTCCTTCTTCCC
TCCTCTCGGCCGGCGTCTCCATCCTCCTGATCCAAGCCGTGGCGGTGAGCGTCGGCGTGGCCACAGCGGGAGACGCGCCG
GCGCAGCTGCCGCGGTCGGAGCTGGCGGCCATCTTCAGGGTGATGGCCGACCTCCTCGGCGACCCGACGTGGCCGCAGCT
CCACCCGCGGCCCTGCACGGACACGCCCTGGCCGGGCCTCCAGTGCGAGCTCGCCCCCGACGACAGCACCCGCCTCCGCT
CCACCCGCCTCCACTTCGGCCCCGACGTCTCCACCCCGCCGTGCAGGCCCGGCGCCAGGCTCGCCGCCCCCGCGATCCTT
GGCCTGCCCCACCTCAGGACCCTTTCCCTCTTCGGCTGCTTCGTTGACGCCGGCCCCGTCGAGCTGCCGCCGGCGCTCTT
CACCAA----------CGCCTCCTCCCTCGAGCAGCT-------------------------------------------
CGTCCTCAAGTCCAACCCGGGCCTCACCGGCCGGATACCGGCAACCTTGACCAACCTGAAGAGCCTGCAAGTGCTTAGCC
TGTCCCAGAACGGCTTCCACGGCGAGATCCCCAGGGAGCTCGGCGGCCTCGCCGCGTTGCAGCAGCTCGA----------
-------CCTCAGCTACAACAACATCACCGGCGAGGTACGTGCGTCGACCTCACGTGCGCCCTTAACTTCGTTATGAATG
TGCATGCCGTGATTCGTGACACTGACACGTACTA----------------------GCAGATACCGGAGGAGATTGGAGG
GATGGCAAGCCTGTCCATCCTGGACCTGAGCTGGAACAGCATCGGCGGCGGCGTGCCGGCGGCGTTGGGTGGCCTGAAGA
TGCTGCAGAAGGCGGACCTGAGCTACAACCGGCTGGCCGGCGTGGTGCCACCGGAGATCGGCTCTCTGAAGGAGCTGGTG
TTCCTGGACCTGAGCCACAACGGGCTGGCGGGCCCGCTGCCAGCCTCGCTTGCCGGGCTGGCGAAGCTGCAGTACCTGCT
CCTGCAGGACAACCCCATCGGCACGGCGGTGCCGGCGGTGGTCGGGTCGTTGCGTCGGCTCCAGGTGCTGGGCCTGTCGG
GATGCAACCTGACGGGGCCGATCCCGCGGGGCGCGTTCGCGGCGCTGGGGAGCCTGATGGCGCTGTCGCTGGACCGGAAC
CGGCTGGACGGGCCGATCCCGGCGAGCCTCGGCGCGCTACCGCACCTGGGGCAGCTCAACCTGAGCCAGAACCGGCTCGC
CGGGGAGATCGCCCTGCCGGTCGAGTTCGTGGCGCGGCTCGGCAGGCGGCTCGACGTGCGCGGCAACGAGGAGCTGTGCG
TCGGCCAGGGCAGGTACAGCGGGCTGCAGGCGAGCTACCTCAGGGCGCCGCCGTGCGTGGGACGGGGGAGCACCA-----
------------------------ACGGGACGGCCGCGCTGGACGAGGGCACCGCGGGGGTTTACGGACCAGTCGTTGGG
TTGGTGTGCCACCTTCTTGTGCTGTTGGTACTCGAGCTGTGA--------------------------------------
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-----------------
>chr5A_1_TraesCS5A01G374600
TTTTGAAGAGAAATCAAGAATAGAAGGTGCTGCGTCAAGTTTGTACTCCCTGTTACCACGAAATCTTCTGTAGCAGGATA
---------GGATTAGTGCACACGAATTTGCAACAGAACATACCCAACTAATCAGTACACAGCAGCACGCAGACCATGCG
TCTGTACAGTACACAGCAGCATGCACACCACGCATCCATTCATA-CACGGTACACACAGCACAAACGACGCCCTCGTCAA
GCTTCGGTCGCTCACCCTCGCCTTTGTCTACAGCCGCTCTCTCCTCGAGCAATAGCAGCGTTGCCTACTCAAACGGTCAA
ACGCCGGCCAACGGCGCCGACGCTCGCCCTCCTCAGGCGCCTTCGCCGGCGGCCTCGTCGCTTGGGGCACAGATCGAGCC
GAGTTGAGAGGCACGCGAGGTGCTCGAGGAGCTTCTGTTTCAGGCAAAGGGTGAGATGCAGCGAAGAAAACGATTCGCGA
GCTCCGTGGTTGCCCATATCCGCGAGAATCTCCCGTACGTGCGGAGCCGGATTTTCAACGAATATTCCAGGAATCTGGCT
ATCCATATCCTTTCTCGCCCATGAACCAAACGCCTGGTATCCCTAAAAAAACTGGGCTATCCCTGTCCTCGCTGGGCTAT
CCCGGGAACCAAACGCATCACAAGCGGGTGTGGGTTTGCGGACGGCGGGGAATGCCTAGGCACTGGCTATGTTTTTCTGT
GTGGTGAAAGTAGAGAGCGCATTTTTTTTGTTTTGACGCGAGCATGGTTCTTTGTTGATGACATTGTTGCCTGTCAGACT
ATGTTCGCAATATTTTCGGGTAGCAGTAAATGAACTTCAGCCCTTTTTAATTTTTCACCATGTACTATGTGTGAAAGGCT
GTCAGAGTGCGTGTGTCTTATCACAGTCTCAAAGCCCATAAAGCAGGTAGCTAGAGCATCCAGATGCGGAGACCTATTCT
ATTCT-----ATCAGTCTATCTCCTTTGCACTATACCCCACTGCGTACTTGGAAAATGGCTTCTTCTTCTCCTTCTTCCC
TCCTCTCGGCCGGCGTCTCCATCCTCCTGATCCAAGCCGTGGCGGTGAGCGTCGGCGTGGCCACAGCGGGAGACGCGCCG
GCGCAGCTGCCGCGGTCGGAGCTGGCGGCCATCTTCAGGGTGATGGCCGACCTCCTCGGCGACCCGACGTGGCCGCAGCT
CCACCCGCGGCCCTGCACGGACACGCCCTGGCCGGGCCTCCAGTGCGAGCTCGCCCCCGACGACAGCACCCGCCTCCGCT
CCACCCGCCTCCACTTCGGCCCCGACGTCTCCACCCCGCCGTGCAGGCCCGGCGCCAGGCTCGCCGCCCCCGCGATCCTT
GGCCTGCCCCACCTCAGGACCCTTTCCCTCTTCGGCTGCTTCGTTGACGCCGGCCCCGTCGAGCTGCCGCCGGCGCTCTT
CACCAA----------CGCCTCCTCCCTCGAGCAGCT-------------------------------------------
CGTCCTCAAGTCCAACCCGGGCCTCACCGGCCGGATACCGGCAACCTTGACCAACCTGAAGAGCCTGCAAGTGCTTAGCC
TGTCCCAGAACGGCTTCCACGGCGAGATCCCCAGGGAGCTCGGCGGCCTCGCCGCGTTGCAGCAGCTCGA----------
-------CCTCAGCTACAACAACATCACCGGCGAGGTACGTGCGTCGACCTCACGTGCGCCCTTAACTTCGTTATGAATG
TGCATGCCGTGATTCGTGACACTGACACGTACTA----------------------GCAGATACCGGAGGAGATTGGAGG
GATGGCAAGCCTGTCCATCCTGGACCTGAGCTGGAACAGCATCGGCGGCGGCGTGCCGGCGGCGTTGGGTGGCCTGAAGA
TGCTGCAGAAGGCGGACCTGAGCTACAACCGGCTGGCCGGCGTGGTGCCACCGGAGATCGGCTCTCTGAAGGAGCTGGTG
TTCCTGGACCTGAGCCACAACGGGCTGGCGGGCCCGCTGCCAGCCTCGCTTGCCGGGCTGGCGAAGCTGCAGTACCTGCT
CCTGCAGGACAACCCCATCGGCACGGCGGTGCCGGCGGTGGTCGGGTCGTTGCGTCGGCTCCAGGTGCTGGGCCTGTCGG
GATGCAACCTGACGGGGCCGATCCCGCGGGGCGCGTTCGCGGCGCTGGGGAGCCTGATGGCGCTGTCGCTGGACCGGAAC
CGGCTGGACGGGCCGATCCCGGCGAGCCTCGGCGCGCTACCGCACCTGGGGCAGCTCAACCTGAGCCAGAACCGGCTCGC
CGGGGAGATCGCCCTGCCGGTCGAGTTCGTGGCGCGGCTCGGCAGGCGGCTCGACGTGCGCGGCAACGAGGAGCTGTGCG
TCGGCCAGGGCAGGTACAGCGGGCTGCAGGCGAGCTACCTCAGGGCGCCGCCGTGCGTGGGACGGGGGAGCACCA-----
------------------------ACGGGACGGCCGCGCTGGACGAGGGCACCGCGGGGGTTTACGGACCAGTCGTTGGG
TTGGTGTGCCACCTTCTTGTGCTGTTGGTACTCGAGCTGTGACGTCTCTGATGAAATATTTGAGCGGGCGATCATTCTTC
ACGAGATTAC-------------------------GTGTTCTCTTGCAGTTTTACCCGATTGGATGAACGT-TCCAAAAT
GCCTGCACCTGGTTCGATCGCGTTATAGGCACATCCTACAGCAGCGTGCCAATATTTGAGCACTTTTAAATTTTACTACA
TTTTAGCACCTTTTAACACCCTCCGTTCCAAATTACTTGTGAAATGGTTGTATCTAGGAATGGGGTGACAAATAACTCGC
CTGAATTACTTGTGAAATGGGTAAAAATGGATGTATCTAAAGATGAGGGTGACAAGTAACTTGAAATGAAGGAGTATAGA
GTAAAATAAAATTTGCATCTTCCTACGAGGGGGTTGAAGGAAATATGCCCTAGAGGCAATAATAAA-TTATTATTTATTT
CCTTATATCATGATAAAAGTTTATTATTCATGCTAGAATTGTATTAACCGGAAACATAATACATGTGTGAATACATAGAC
AAACAGAGTGTCACTAGTATGCCTCTACTTGACTAGCTCGTTAATCAAAGATGGTTATGTTTCCTAACCATGGAC-AAAG
AGTTGGTATTTGATTAACGGGATCACATCATTAGTTGAATGATCTGATTGACATGACCCATTCCATTAGCTTAGCACCCG
ATCATTTAGTATGTTGCTATTGCTTTCTTCATGACTTATACATGTTCCTGTGACTATGAGGTTATGTAACCCCCGTGTGC
CGGAGGAACACTTTGTGTGCTACCAAACGTCGCAACGTAACTGGGTGATTATAAAGGTGCTCTACAGGTGTCTCCAAAGG
TACATGTTGGGTTGACGTATTTCGAGATTAGGATTTGTCACT--------------------------------------
----------------------------CCGATCGTCGGAGAGGTATCTCTGGGCCCTCTCGGTAATGCACATCACTTAA
-GCCTTGCAAGCATTGCAACTAATGAGTTAGTTACGGGATAATGTATTACAGAACGAGTAAAGAGACTTGCCGGTAACGA
GATTGAACTAGGTATTG
>chr7D_1
TTTTGAAGAGAAATCAAGAATAGAAGGTGCTGCGTCAATTTTGTACTCCCTGTCACCATGAAATCTTCTGCAGCAGAATG
CCAAAAGGGGGATTACTGCACAAGAACTTGCAACAGAACACACCCAACTAATCAGTACACAGCAGCACGCACACCATGCG
TCGGTACAGTACACAGCAGCATGCACACCACGCATCCATTCATATCAAGGTACACACAACACA-----------------
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---------------------------------------------GACGCCGCCCTCGTCAAGCTTCGGCCGTGCACGCC
CGCCTTTGTCTACAGCCGCCTTCTCCTCAGCAATAGCAGCGCTGCCTACTCAAACGCCATCTAGCGTCGCCAATGCTCGC
CGTCCTCAAGCCCGGGTCTACGTCATCT----------------------------------------------------
-----------------------------------GAGCTCGCCGGCCTGCCTCATCAGGCTCTCGCTCCGGCCACCGTG
TGCCAATCCTCAGTCAACACAACGTCGTCGCACAGCTGCAGTCAA-----------------------------------
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------------------TGCGCTCCACTCGGGCGGCCGGCCTCGTGCACCTTCAGGCTACTGGA---------------
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-------------------------------------------GGCGCCGCCGGGCATTCGCTGCTCTAGGCTGTAAGGC
GGCGGCGGCCTCGTCGCTTGGGGCACAGATCGGACCGAGTTGAAGAGGCACGCGAGGGGCTCGAGGAGCTTCTATTTTAG
GGAAAGGGTGAGATGCAGCGGAGAAAACGATTCGCGAGCTCGG-------------------------------------
------------------------------------------------------------TGGATGCCCATATCCGCGAG
ATTCGCGCGTACG-------------------------------------------------------------------
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-------TGCGGAGCCGGATTTTCAGCGAATATTCCAGGAATCTGGCTGTCCATATCCCTTCTCGCCCACGAACCAAACA
CCTGGCATCCCTCAAAAACTGGGCTATCCCTGTCCTCGCAGGGCTATCCCGGGAACCAAACGCATC--------------
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>chr5D_690
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-----------------------------------------------------------GCACTGACTATGTTTTTCTGT
GTGGTGAAAGTAGAGAGCGCATTTTTTT--TTTTGACGCGAGCATGGTTCTTTGTTGATGACATTGTTGTCTGTCAGATT
ATGTTCGCAATATTTTCGGCAAGCAGTAAATGAACTTCAGCCCTTTT-AATTTTTCACCATGTACTATGTGTGAAAGACT
GTCAGAGTGCGTGTGTCTTGTCACAGTCTCAAAGCCCATAAAGC---TAGCTAGAGCATCCAGATGCGGTGACCTATTCT
ATTCTGGAGCATCAGTCTATCTCCTTTGCACTATACCCCACTGCGTACTTGGAAAATGGCTTCTTCCTCT------TCGC
TCCTCTCGGCCGGCGTCTCCATCCTCCTGATCCAAGCCGTGGCGGTG------GGCGTGGCCACCGCAGGAGACGCGCCG
GCGCAGCTGCCGCGGTCGGAGCTGGCGGCGATCTTCAGGGTGATGGCCGACCTCCTCGGCGACCCGACGTGGCCGCAGCT
CCACCCGCGGCCCTGCACGGACACGCCCTGGCCGGGCCTCCAGTGCGAGCTCGCCCCCGACGACAGCACCCGCCTCCGCG
CCACCCGCCTCCATTTCGGCCCCGACGTCTCCACCCCGCCCTGCAGGCCCGGCGCCAGGCTCGCCGCCCCCGCGATCCTT
GGCCTGCCCCACCTCAGGACCCTCTCCCTCTTCGGCTGCTTCGTCGACGCCGGCCCCGTCGAGCTGCCGCCGGTGCTCTT
CACCAA----------CGCCTCCTCCCTCGAGCAGCT-------------------------------------------
CGTCCTCAAGTCCAACCCGGGCCTGACCGGCCGGATACCGGCAACCTTGACTAACCTGAAGAGCCTGCAAGTGCTTAGCC
TGTCCCAGAACGGCTTCCACGGCGAGATCCCCAGGGAGCTCGGCGGCCTCGCCGCGTTGCAGCAGCTCGA----------
-------CCTCAGCTACAACAACATCACCGGCGAGGTACGTGCGTTGACCTCACGTGCGCCCTTAACTTCGTTACGAATG
TGCATGCCGTGATTGGTGACACTGACACGTAGCATGAGTTTTTGATTCGGCGCGCGGCAGATACCGGAGGAGCTTGGAGG
GATGGCGAGCCTATCCATCCTGGACCTGAGCTGGAACAGCATTGGCGGCGGCGTGCCGGCGGCGTTGGGTGGCCTGAAGA
TGCTGCAGAAGGCGGACCTGAGCTACAACCGGCTGGCCGGCGTTGTGCCGCCGGAGGTCGGGTCTCTGAAGGAGCTGGTG
TTCCTGGACCTGAGCCACAACGGGCTCGCGGGGCCGCTGCCAGCCTCGCTTGCCGGGCTGGCGAAGCTGCAGTACCTGCT
CCTGCAGGACAACCCCATCGGCACGGCGGTGCCGGCGGTGGTCGGGTCGCTGCGGCGGCTGCAGGTGCTGGGCCTGTCGG
GGTGCAACCTGACGGGCCCGATCCCGCGGGGCGCGTTCGCGGCGCTGGGGAGCCTGATGGCGCTGTCGCTGGACCGGAAC
CGGCTGGACGGGCCGATCCCGGCGAGCCTCGGCGCGCTGCCGCACCTGGGGCAGCTCAACCTGAGCCAGAACCGGCTCGC
CGGGGAGATCGCCCTGCCGGTCGAGTTCGTGGCGCGGCTCGGCAGGCGGCTCGACGTGCGCGGCAACGAGGAGCTGTGCG
TCGGCCAGGGCAGGTACGGCGGGCTGCAGGCCAGCTACCTCAGGGCGCCGCCGTGCGTGGGACGGGGGAGCACCA-----
------------------------ACGGGACGGCCGCGCTGGACGAGGGCGCCGCGGGGGTTTACGGGCCAGTCGTTGGG
TTGGTGTGCCACCTTCTTGTGTTGTTGGTACTCAAGCTGTGACGTCTCTGATGAAATATTTGAGCGGGCGATCATTCTTC
ACGAGATTACCGGGTCCAACGAGATGGATCGTTACGTGTTCTCTTGCAGTTTTATCCGACTGGATGAACGTATCCAAAAT
GCCAGCACCTGGCTCGATAGCTTTATAGGCACATCCTACAGCAGGGTGCCAATATTTGAGCACTTCTAAATCTTGCG---
TTTTAGCAACTTTAACA---------------------------------------------------------------
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>chr5B_690
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-----------------------------------------------------------GCACTGACTATGTTTTTCTGT
GTGGTGAAAGTAGAGAGCGTA-TTTATT--TTTTAACGCGAGCATGGTTCTTTGTTGGTGACATTGTTGTCTGTCAGATT
ATGTTCGCAATATTTTCGGCAAGCAGTAAATGAACTTCAGCCCTTTTTAGTTTTTCACCATGTG---TGTGTGAAAGACT
GTCAGAGTGCGTGTGTCTTGTCACAGTCTCAAAGCCCATAAAGC---TAGCTAGAGCATCCAGATGCGAAGACCTATTCT
ATTCT-----ATCAGTCTATCTCCTTTGCACTATACCCCACTGCGTACTTGGAAAATGGCTTCTTCTTCT------TCCC
TCCTCTCGGCCGGCGTCTCCATCCTCCTGATCCAAGCCGTGGCGGTGAGCGTCGGCGTGGCCACCGCGGGAGACGCGCCG
GCGCAGCTGCCGCGGTCGGAGCTGGCGGCGATCTTCAGGGTGATGGCCGACCTCCTCGGCGACCCGACGTGGCCGCAGCT
CCACCCGCGGCCCTGCACAGACACGCCCTGGCCGGGCCTCCAGTGCGAGCTCGCCCCCGACGACAGCACCCGCCTCCGCG
CCACCCGCCTCCATTTCGGCCCCGACGTCTCCACCCCGCCGTGCAGGCCCGGCGCCAGGCTCGCCGCCCCCGCGATCCTT
GGCCTGCCCCACCTCAGGACCCTCTCCCTCTTCGGCTGCTTCGTCGACGCCGGCCCCGTCGAGCTGCCGACGGCGCTCTT
CACCAA----------CGCCTCCTCCCTCGAGCAGCT-------------------------------------------
CGTTCTCAAGTCCAACCCGGGCCTGACCGGCCGGATACCGGCAACCTTGACCAACCTGAAGAGCCTGCAAGTGCTTAGCC
TGTCCCAGAACGGCTTCCACGGTGAGATCCCCAGGGAGCTCGGCGGCCTCACCGCGTTGCAGCAGCTCGA----------
-------CCTCAGCTACAACAACATCACCGGCGAGGTACGTGCGTTGACCTCACGTGCGCCCTTAACTTCGTCATGGATG
TGCATGCCGTGATTCGTGACACTGGCACGTAGCATAAGCTTTTCTTTCGGCGCGCGGCAGATACCGGATGAGATTGGAGG
CATGGCGAGCCTGTCCATCCTGGACCTGAGCTGGAACGGCATCGGCGGCGGCGTGCCGGCGGCATTGGGTGGCCTGAAGA
TGCTGCAGAAGGCGGACCTGAGCTACAACTGGCTCGCCGGCGTGGTGCCACCGGAGGTCGGGTCCCTGAAGGAGCTGGTG
TTCCTGGACCTGAGCCACAACGGGCTCGCGGGCCCGCTGCCAGCTTCCCTTGCCGGGCTGGCGAAGCTGCAGTACCTGCT
CCTGCAGGACAACCCCATCGGCACGGCGGTGCCGGCGGTGGTCGGGTCGCTGCGGCGGCTGCAGGTGCTGGGCCTGTCGG
GGTGCAACCTGACGGGGCCGATCCCGCGGGGCGCGTTCGCGGCGCTGGGGAGCCTGATGGCGCTGTCGCTGGACCGGAAC
CGGCTGGACGGGCCGATCCCGGCGAGCCTCGGCGCGCTGCCGCACCTGGGGCAGCTCAACCTGAGCCAGAACCGGCTCGC
CGGGGAGATCGCGCTGCCGGTCGAGTTCGTGGCGCGGCTCGGCAGGCGGCTCGACGTGCGCGGCAACGAGGAGCTGTGCG
TCGGTCAGGGAAGGTACGGCGGGCTGCAGGCCAGCTACCTCAGGGCGCCGCCGTGCGTGGGACGGGGGAGCACCA-----
------------------------ACGGGACGGCCGCGCTGGACGAGGGCGCCGCGGGGGTTTACGGACCAGTCGTTGGG
CTGGTGTGCCACCTTCTTGTGTTGTTGGCACTCAAGCTGTGACGTCTCTGATCAAATATTTGAGCGGGCGATCATTCTTC
ACAAGATTAC----------------------------------------------------------------------
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>chr1A_2825
GAGGGGGATAC---------------------------------------------------------------------
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----------------------------------TGAAGGAAATATGCCCTAGAGGCAATAATAAAGTTATTATTTATTT
CCTTATATCATGATAAAAGTTTATTATTCATGCTAGAATTGTATTAACCGGAAACATAATACATGTGTGAATACATAGAC
AAACAGAGTGTCACTAGTATGCCTCTACTTGACTAGCTCGTTAATCAAAGATGGTTATGTTTCCTAACCATGGAC-AAAG
AGTTGTCATTTGATTAACGGGATCACATCATTAGTTGAATGATCTGATTGACATGACCCATTTCATTAGCTTAGCACCCG
ATCGTTTAGTATGTTGCTATTGCTTTCTTCATGACTTATACATGTTCCTATGACTATGAGATTATGCAACTCCCGTGTGC
CGGAGGAACACTTTGTGTGCTACCAAACGTCACAACGTAACTGGGTGATTATAAAGGTGCTCTACAGGTGTCTCCAAAGG
TACATGTTGGGTTGGCGTATTTCGAGATTAGGATTTGTCACT--------------------------------------
----------------------------CCGATCGTCGGAGAGGTATCTCTGGGCCCTCTCGGTAATGCACATCACTTAA
-GCCTTGCAAGCATTGCAACTAATGAGTTAGTTGCGGGATGATGTATTACGGAACGAGTAAAGAGACTTGCCGGTAACGA
GATTGAACTAGGTATTG
>chr2A_2832
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---------------------------------TTGAAGGAAATATGCCCTAGAGGCAATAATAAAGTTATTATTTATTT
CCTTATATCATGATAAAAGTTTATTATTCATGCTAGAATTGTATTAACCGGAAACATAATACATGTGTGAATACATAGAC
AAACAGAGTGTCACTAGTATGCCTCTACTTGACTGGCTCGTTAATCAAAGATGGTTATGTTTCCTAACCATGGAC-AAAG
AGTTGTTATTTGATTAACGGGATCACATCATTAGTTGAATGATCTGATTGACATGACCCATTCCATTAGCTTAGCACCCG
ATCGTTTAGTATGTTGCTATTGCTTTCTTCATGACTTATACATGTTCCTATGACTATGAGATTATGTAACTCCCGTGTGC
CGGAGGAACACTTTGTGTGCAACCAAACGTCACAACGTAACTGGGTGATTATAAAGGTGCTCTACAGGTGTCTCCAAAGG
TACATGTTGGGTTGACGTATTTCGAGATTAGGATTTGTCACT--------------------------------------
----------------------------CCGATCGTCGGAGAGGTATCTCTGGGCCCTCTCGGTAATGCACATCACTTAA
-GCCTTGCAAGCATTGCAACTAATGAGTTAGTTGCGAGATGATGTATTACAGAACGAGTAAAGAGACTTGCCGATAACGA
GATTGAACTAGGTATTG
>chr6A_2832
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---------------------------------TTGAAGGAAATATGCCCTAGAGGCAATAATAAAGTTATTATTTATTT
CCTTATATCATGATAAAAGTTTATTATTCATGCTAGAATTGTATTAACCGGAAACATAATACATGTGTGAATACATAGAC
AAACAGAGTGTCACTAGGATGCCTCTACTTGACTAGCTCGTTAATCAAAGATGGTTATGTTTCCTGACCATGGACAAAAG
AGTTGTTATTTGATTAACGGGATCACATCATTAGTCGAATGATCTGATTGACATGACCCATTCCATTAGCTTAGCACCCG
ATCGTTTAGTATGTTGCTATTGCTTTCTTCATGACTTATACATGTTCCTATGACTATGAGATTATGTAACTCCCGTGTGC
CGGAGGAACACTTTGTGTGCTACCAAACGTCACAACGTAACTGGGTGATTATAAAGGTGCTCTACAGGTGTCTCCAAAGG
TACATGTTGGGTTGACGTATTTCGAGATTAGGATTTGTCACT--------------------------------------
----------------------------CCGATCGTCGGAGAGGTATCTCTGGGCCCTCTCGGTAATGCACATCACTTAA
-GCCTTGCAAGCATTGCAACTAATGAGTTAGTTGCGGGATGATGTATTACAGAACGAGTAAAGAGACTTGCCGGTAACGA
GATTGAACTAGGTATTG
>chr5A_2833
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----------------------------------TGAAGGAAATATGCCCTAGAGGCAATAATAAAGTTATTATTTATTT
CCTTATATCATGATAAAAGTTTATTATTCATGCTAGAATTGTATTAACCGGAAACATAATACATGTGTGAATACATAGAC
AAACAGAGTGTCACTAGTATGCCTCTACTTGACTAGCTCGTTAATCAAAGATGGTTATGTTTCCTAACCATGGAC-AAAG
AGTTGTTATTTCATTAACGGGATCACATCATTAGTTGAATGATCTGATTGACATGACCCATTCCATTAGCTTAGCACCCG
ATCGTTTAGTATGTTGCTATTGCTTTCTTCATGACTTATACATGTTCCTATGACTATGAGATTATGTAACTCCCGTGTGC
CGGAGGAACACTTTGTGTGCTACCAAACGTCACAACGTAACTGGGTGATTATAAAGGTGCTCTACAGGTGTCTCCAAAGG
TACATGTTGGGTTGACGTATTTCGAGATTAGGATTTGTCACT--------------------------------------
----------------------------CCGATCGTCGGAGAGGTATCTCTGGGCCCTCTCGGTAATGCACATCACTTAA
-GCCTTGCAAGCATTGCAACTAATGAGTTAGTTGCGGGATGATGTATTATAGAACGAGTAAAGAGACTTGCCGGTAACGA
GATTGAACTAGGTATTG
>chr5A_2833
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----------------------------------TGAAGGAAATATGCCCTAGAGGCAATAATAAAGTTATTATTTATTT
CCTTATATCATGATAAAAGTTTATTATTCATGCTAGAATTGTATTAACCGGAAACATAATACATGTGTGAATACATAGAC
AAACAGAGTGTCACTAGTATGCCTCTACTTGACTAGCTCGTTAATCAAAGATGGTTATGTTTCCTGACCATGGAC-AAAG
AGTTGTTATTTGATTAACGGGATCACATCATTAGTTGAATGATCTGATTGACATGACCCATTCCATTAGCTTAGCACCCG
ATCATTTAGTATGTTGCTATTGCTTTCTTCATGACTTATACATGTTCCTATGACAATGAGATTATGTAACTCCCGTGTGC
CGGAGGAACACTTTGTGTGCTACCAAACGTCACAATGTAACTGGGTGATTATAAAGGTGCTCTACAGGTGTCTCCAAAGG
TACATGTTGGGTTGACGTATTTCGAGATTAGGATTTGTCACT--------------------------------------
----------------------------CCGATCGTCGGAGAGGTATCTCTGGGCCCTCTCGGTAATGCACATCACTTAA
-GCCTTGCAAGCATTGCAACTAATGAGTTAGTTGCGGGATGATGTATTACGGAACGAGTAAAGAGACTTGCCAGTAACGA
GATTGAACTAGGTATTG
>chr2A_2833
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----------------------------------TGAAGGAAATATGCCCTAGAGGCAATAATAAAGTTATTATTTATTT
CCTTATATCATGATAAAAGTTTATTATTCATGCTAGAATTGTATTAACCGGAAACATAATACATGTGTGAATACATAGAC
AAACAGAGTGTCACTAGTATGCCTCTACTTGACTAGCTCGTTAATCAAAGATGGTTATGTTTCCTAACCATGGAC-AAAG
AGTTGTTATTTGATTAACGGGATCACATCATTAGTTGAATGATCTGATTGACATGACCCATTCCATTAGCTTAGCACCCG
ATCGTTTAGTATGTTGCTATTGCTTTCTTCATGACTTATACATGTTCCTATGACTATGAGATTATGTAACTCCCGTGTGC
CGGAGGAACACTTTGTGTGCTACCAAACGTCACAACGTAACTGGGTGATTATAAAGGTGCTCTACAGGTGTCTCCAAAGG
TACATGTTGGGTTGACGTATTTTGAGATTAGGATTTGTCACT--------------------------------------
----------------------------CCGATCGTCGGAGAGGTATCTCTGGGCCCTCTCGGTAATGCACATCACTTAA
AGCCTTGCAAGCATTGCAACTAATGAGTTAGTTGCGGGATGATGTATTACAGAACGAGTAAAGAGACTTGCCGGTAACGA
GATTGAACTAGGTATTG
>chr2A_2833
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----------------------------------TGAAGGAAATATGCCCTAGAGGCAATAATAAAGTTATTATTTATTT
CCTTATATCATGATAAAAGTTTATTATTCATGCTAGAATTGTGTTAACCGGAAACATAATACATGTGTGAATACATAGAC
AAACAGAGTGTCACTAGTATGCCTCTACTTGACTAGCTCGTTAATCAAAGATGGTTATGTTTCCTAACCATGGAC-AAAG
AGTTGTTATTTGATTAACGGGATCACATCATTAGTTGAATGATCTGATTGACATGACCCATTCCATTAGCTTAGCACCCG
ATCGTTTAGTATGTTGCTATTGCTTTCTTCATGACTTATACATGTTCCTATGACTATGAGATTATGTAACTCCCGTGTGC
CGGAGGAACACTTTGTGTGCAACCAAACGTCACAACGTAACTGGGTGATTATAAAGGTGCTCTACAGGTGTCTCCAAAGG
TACATGTTGGGTTGACGTATTTCGAGATTAGGATTTGTCACT--------------------------------------
----------------------------CCGATCGTCGGAGAGGTATCTCTGGGCCCTCTCGGTAATGCACATCACTTA-
AGCCTTGCAAGCATTGCAACTAATGAGTTAGTTGCGAGATGATGTATTACAGAACGAGTAAAGAGACTTGCCGGTAATGA
GATTGAACTAGGTATTG
>chr6A_2833
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----------------------------------TGAAGGAAATATGCCCTAGAGGCAATAATAAAGTTATTATTTATTT
CCTTATATCATGATAAATGTTTATTATTCATGCTAGAATTGTATTAACCGGAAACATAATACATGTGTGAATACATAGAC
AAACAGAGTGTCACTAGTATGCCTCTACTTGACTAGCTCGTTAATCAAAGATGGTTATGTTTCCTAACCATGGAC-AAAG
AGTTGTTATTTGATTAACGGGATCACATCATTAGTTGAATGATCTGATTGACATGACCCATTCCATTAGCTTAGCACCCG
ATCGTTTAGTATGTTGCTATTGCTTTCTTCATGACTTATACATGTTCCCATGACTATGAGATTATGTAACTCCCGTGTGC
CGGAGGAACACTTTGTGTGCTACCAAACGTCACAACGTAACTGGGTGATTATAAAGGTGCTCTACAGGTGTCTCCAAAGG
TACATGTTGGGTTGACGTATTTCGAGATTAGGATTTGTCACT--------------------------------------
----------------------------CCGATCGTCGGAGAGGTATCTCTGGGCCCTCTCGGTAATGCACATCACTTA-
AGCCTTGCAAGCATTGCAACTAATGTGTTAGTTGCGGGATGATGTATTACAGAACGAGTAAAGAGACTTGCCGGTAACAA
GATTGAACTAGGTATTG
>chr1A_2835
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------------------------------------AAGGAAATATGCCCTAGAGGTAATAATAAAGTTATTATTTATTT
CCTTATATCATGATAAATGTTTATTATTCATGCTAGAATTGTATTAACCGGAAACATAATACATGTGTGAATACATAGAC
AAACAGAGTGTCACTAGTATGCCTCTACTTGACTAGCTCGTTAATCAAAGATGGTTATGTTTCCTAACCATGGAC-AAAG
AGTTGTCATTTGATTAACGGGATCACATCATTAGTTGAATGATCTGATTGACATGACCCATTCCATTAGCTTAGCACCCG
ATCGTTTAGTATGTTGCTATTGCTTTCTTCATGACTTATACATGTTCCTATGACTATGAGATTATGTAACTCCCGTGTGC
CGGAGGAACACTTTGTGTGCTACCAAACGTCGCAACGTAACTGGGTGATTATAAAGGTGCTCTACAGGTGTCTCCAAAGG
TACATGTTGGGTTGACGTATTTCGAGATTAGGATTTGTCACT--------------------------------------
----------------------------CCGATCGTCGGAGAGGTATCTCTGGGCCCTCTCGGTAATGCACATCACTTA-
AGCCTTGCAAGCATTGCAACTAATGAGTTAGTTGCGGGATGATGTATTACGGAACGAGTAAAGAGACTTGCCGGTAACGA
GATTGAACTAGGTATTG
>SNPs
--------------------------------------S--------------S----S-----------S-----S--S
---------------S------S---S-------------S------------------------------S--------
--S--------------------------------------------S----------S----SSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------S--------------
----------------------------SS---------------------------------------S--------S-
-------------------SS--------------------------------------------------------S--
-------------------S------------------------SSS---------------------------------
----------------------------------------------------------------------SSSSSS----
----------------------------------------------------------------S---------------
-----------------------------S--------------------------------------------------
-------------------------------------------------------------------------------S
-------------S------------------------------------------------------------------
-----------------------S--------------------S-----------------------------------
--------------------------------------------------------------------------------
------------------------S-------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------S----------------------------------
-------------------------------SS-----------------------------------------------
------S-------------------------------------------------------------------------
--------------------------------------------------------S----S------------------
--------------------------S-----------------------------------------------------
-------------------------------------------------S----S-----S-------------------
-S------------------------------------------------------------------------------
--------------------------------------S-----------------------------------------
--------------------------------------------------------------------------------
-----------------S-------------S------------------------------------------------
--------------------------------------------------S-----------------------------
---------------------S----------------------------------------------------------
------------------------------------------------------S----S--------------------
---S--------S-----S--S----------------------S--------------------S-----S--S-SSSS
--------S----S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------------------------------------
--------------------------------------------------------------------------------
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-----S--------------------------------------------------------------------------
-------------------------------------------------S----------S---------S---------
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---------------------------------S------S---------------------------------------
-----------------
>forward_485
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-----------------------------------------------------------------GAAAACGATTCGCGA
GCTCC---------------------------------------------------------------------------
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>reverse_1982
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-------------------------------------------------------------CTCTCTGAAGGAGCTGGTG
T-------------------------------------------------------------------------------
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>forward_587
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-------TCCTTTCTCGCCCATGAACC-----------------------------------------------------
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>reverse_2695
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------------------------------------------------------CCCGATTGGATGAACGTTCC------
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-----------------
