Multiple sequence alignment - TraesCS5A01G371300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G371300 chr5A 100.000 2216 0 0 1 2216 570236071 570238286 0.000000e+00 4093.0
1 TraesCS5A01G371300 chr5D 81.763 1157 158 27 888 2032 451038748 451039863 0.000000e+00 918.0
2 TraesCS5A01G371300 chr5D 90.374 187 18 0 2030 2216 84313413 84313227 1.700000e-61 246.0
3 TraesCS5A01G371300 chr5D 77.778 252 49 5 1752 1998 430579899 430580148 4.930000e-32 148.0
4 TraesCS5A01G371300 chr5D 86.154 65 7 1 1872 1936 550613428 550613490 3.950000e-08 69.4
5 TraesCS5A01G371300 chr5B 82.222 990 148 12 863 1838 551278054 551279029 0.000000e+00 828.0
6 TraesCS5A01G371300 chr5B 84.848 198 19 5 1833 2027 551294878 551295067 2.900000e-44 189.0
7 TraesCS5A01G371300 chr2A 91.892 185 15 0 2032 2216 694680136 694679952 2.180000e-65 259.0
8 TraesCS5A01G371300 chr2A 97.143 35 1 0 1389 1423 774797523 774797557 2.380000e-05 60.2
9 TraesCS5A01G371300 chr2A 100.000 28 0 0 544 571 552486688 552486661 4.000000e-03 52.8
10 TraesCS5A01G371300 chr6A 90.206 194 17 2 2023 2216 589364862 589365053 3.650000e-63 252.0
11 TraesCS5A01G371300 chr3B 90.909 187 17 0 2030 2216 372274636 372274822 3.650000e-63 252.0
12 TraesCS5A01G371300 chr3B 82.353 68 7 4 1969 2032 618003691 618003625 1.000000e-03 54.7
13 TraesCS5A01G371300 chr2D 90.909 187 16 1 2031 2216 651576566 651576752 1.310000e-62 250.0
14 TraesCS5A01G371300 chr2D 100.000 28 0 0 544 571 434676653 434676680 4.000000e-03 52.8
15 TraesCS5A01G371300 chrUn 90.811 185 17 0 2032 2216 115123705 115123521 4.730000e-62 248.0
16 TraesCS5A01G371300 chrUn 73.588 655 120 37 1135 1751 75991359 75991998 3.730000e-48 202.0
17 TraesCS5A01G371300 chrUn 86.897 145 14 5 1608 1751 231195552 231195692 8.190000e-35 158.0
18 TraesCS5A01G371300 chr4D 90.811 185 17 0 2032 2216 392859802 392859986 4.730000e-62 248.0
19 TraesCS5A01G371300 chr4D 73.177 727 146 32 999 1703 35410113 35409414 1.330000e-52 217.0
20 TraesCS5A01G371300 chr3D 90.811 185 17 0 2032 2216 402901573 402901389 4.730000e-62 248.0
21 TraesCS5A01G371300 chr1B 90.811 185 17 0 2032 2216 197008690 197008506 4.730000e-62 248.0
22 TraesCS5A01G371300 chr1B 79.487 117 17 5 1829 1941 431406555 431406442 2.360000e-10 76.8
23 TraesCS5A01G371300 chr1B 80.208 96 16 3 1863 1957 616319676 616319769 3.950000e-08 69.4
24 TraesCS5A01G371300 chr6D 87.368 95 10 2 1658 1751 5846194 5846101 8.370000e-20 108.0
25 TraesCS5A01G371300 chr7A 76.096 251 31 17 1769 1994 522982462 522982708 1.080000e-18 104.0
26 TraesCS5A01G371300 chr7A 79.646 113 21 2 1883 1994 108199987 108199876 1.820000e-11 80.5
27 TraesCS5A01G371300 chr7D 79.688 128 22 4 1870 1994 472790933 472790807 3.030000e-14 89.8
28 TraesCS5A01G371300 chr4B 92.857 42 2 1 1389 1429 567598338 567598297 2.380000e-05 60.2
29 TraesCS5A01G371300 chr3A 100.000 28 0 0 1675 1702 1032588 1032615 4.000000e-03 52.8
30 TraesCS5A01G371300 chr2B 100.000 28 0 0 544 571 513289065 513289092 4.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G371300 chr5A 570236071 570238286 2215 False 4093 4093 100.000 1 2216 1 chr5A.!!$F1 2215
1 TraesCS5A01G371300 chr5D 451038748 451039863 1115 False 918 918 81.763 888 2032 1 chr5D.!!$F2 1144
2 TraesCS5A01G371300 chr5B 551278054 551279029 975 False 828 828 82.222 863 1838 1 chr5B.!!$F1 975
3 TraesCS5A01G371300 chrUn 75991359 75991998 639 False 202 202 73.588 1135 1751 1 chrUn.!!$F1 616
4 TraesCS5A01G371300 chr4D 35409414 35410113 699 True 217 217 73.177 999 1703 1 chr4D.!!$R1 704

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
727 728 0.027455 GGCTGCCGCAAAACAAAAAC 59.973 50.0 1.35 0.0 38.1 2.43 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1926 1978 0.033601 GATATTGCACCACCCCCACA 60.034 55.0 0.0 0.0 0.0 4.17 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
48 49 9.787532 AATAATTTTCGTACCAATTCTGTCATG 57.212 29.630 0.00 0.00 0.00 3.07
49 50 7.447374 AATTTTCGTACCAATTCTGTCATGA 57.553 32.000 0.00 0.00 0.00 3.07
50 51 6.869315 TTTTCGTACCAATTCTGTCATGAA 57.131 33.333 0.00 0.00 0.00 2.57
51 52 6.869315 TTTCGTACCAATTCTGTCATGAAA 57.131 33.333 0.00 0.00 0.00 2.69
52 53 7.447374 TTTCGTACCAATTCTGTCATGAAAT 57.553 32.000 0.00 0.00 0.00 2.17
53 54 8.554835 TTTCGTACCAATTCTGTCATGAAATA 57.445 30.769 0.00 0.00 0.00 1.40
54 55 8.554835 TTCGTACCAATTCTGTCATGAAATAA 57.445 30.769 0.00 0.00 0.00 1.40
55 56 8.554835 TCGTACCAATTCTGTCATGAAATAAA 57.445 30.769 0.00 0.00 0.00 1.40
56 57 9.004717 TCGTACCAATTCTGTCATGAAATAAAA 57.995 29.630 0.00 0.00 0.00 1.52
57 58 9.619316 CGTACCAATTCTGTCATGAAATAAAAA 57.381 29.630 0.00 0.00 0.00 1.94
64 65 9.985730 ATTCTGTCATGAAATAAAAATGTGTGT 57.014 25.926 0.00 0.00 0.00 3.72
65 66 9.814899 TTCTGTCATGAAATAAAAATGTGTGTT 57.185 25.926 0.00 0.00 0.00 3.32
66 67 9.462174 TCTGTCATGAAATAAAAATGTGTGTTC 57.538 29.630 0.00 0.00 0.00 3.18
67 68 9.467258 CTGTCATGAAATAAAAATGTGTGTTCT 57.533 29.630 0.00 0.00 0.00 3.01
68 69 9.814899 TGTCATGAAATAAAAATGTGTGTTCTT 57.185 25.926 0.00 0.00 0.00 2.52
108 109 9.104965 AGTGTTAAAATCTTTTAAAAAGTGCCC 57.895 29.630 8.92 0.00 42.33 5.36
109 110 8.884726 GTGTTAAAATCTTTTAAAAAGTGCCCA 58.115 29.630 8.92 0.20 42.33 5.36
110 111 8.884726 TGTTAAAATCTTTTAAAAAGTGCCCAC 58.115 29.630 8.92 0.00 42.33 4.61
111 112 8.884726 GTTAAAATCTTTTAAAAAGTGCCCACA 58.115 29.630 8.92 0.00 42.33 4.17
112 113 9.620259 TTAAAATCTTTTAAAAAGTGCCCACAT 57.380 25.926 1.66 0.00 39.06 3.21
114 115 9.791801 AAAATCTTTTAAAAAGTGCCCACATAT 57.208 25.926 1.66 0.00 0.00 1.78
115 116 9.791801 AAATCTTTTAAAAAGTGCCCACATATT 57.208 25.926 1.66 0.00 0.00 1.28
116 117 9.791801 AATCTTTTAAAAAGTGCCCACATATTT 57.208 25.926 1.66 2.20 0.00 1.40
117 118 9.791801 ATCTTTTAAAAAGTGCCCACATATTTT 57.208 25.926 1.66 7.68 32.21 1.82
118 119 9.267084 TCTTTTAAAAAGTGCCCACATATTTTC 57.733 29.630 1.66 0.00 30.62 2.29
119 120 9.271828 CTTTTAAAAAGTGCCCACATATTTTCT 57.728 29.630 1.66 0.00 30.62 2.52
120 121 9.620259 TTTTAAAAAGTGCCCACATATTTTCTT 57.380 25.926 0.00 0.00 30.62 2.52
122 123 9.921637 TTAAAAAGTGCCCACATATTTTCTTAG 57.078 29.630 0.82 0.00 30.62 2.18
123 124 7.775053 AAAAGTGCCCACATATTTTCTTAGA 57.225 32.000 0.82 0.00 0.00 2.10
124 125 7.961326 AAAGTGCCCACATATTTTCTTAGAT 57.039 32.000 0.82 0.00 0.00 1.98
125 126 7.961326 AAGTGCCCACATATTTTCTTAGATT 57.039 32.000 0.82 0.00 0.00 2.40
126 127 7.961326 AGTGCCCACATATTTTCTTAGATTT 57.039 32.000 0.82 0.00 0.00 2.17
127 128 8.366359 AGTGCCCACATATTTTCTTAGATTTT 57.634 30.769 0.82 0.00 0.00 1.82
128 129 8.815912 AGTGCCCACATATTTTCTTAGATTTTT 58.184 29.630 0.82 0.00 0.00 1.94
155 156 9.716531 TTGTGAATTTTATAAAATGATGGTGCA 57.283 25.926 21.23 11.92 38.53 4.57
156 157 9.716531 TGTGAATTTTATAAAATGATGGTGCAA 57.283 25.926 21.23 2.11 38.53 4.08
170 171 9.807649 AATGATGGTGCAATTTTCTAAGTATTC 57.192 29.630 0.00 0.00 0.00 1.75
171 172 8.347004 TGATGGTGCAATTTTCTAAGTATTCA 57.653 30.769 0.00 0.00 0.00 2.57
172 173 8.970020 TGATGGTGCAATTTTCTAAGTATTCAT 58.030 29.630 0.00 0.00 0.00 2.57
173 174 9.807649 GATGGTGCAATTTTCTAAGTATTCATT 57.192 29.630 0.00 0.00 0.00 2.57
229 230 9.884636 AAGGTTTTCACTTATGTTTTTAAAGCT 57.115 25.926 0.00 0.00 34.65 3.74
230 231 9.884636 AGGTTTTCACTTATGTTTTTAAAGCTT 57.115 25.926 0.00 0.00 30.59 3.74
236 237 9.730420 TCACTTATGTTTTTAAAGCTTTCTCAC 57.270 29.630 16.57 9.11 0.00 3.51
237 238 9.515020 CACTTATGTTTTTAAAGCTTTCTCACA 57.485 29.630 16.57 14.29 0.00 3.58
243 244 9.429359 TGTTTTTAAAGCTTTCTCACAATTTGA 57.571 25.926 16.57 0.00 0.00 2.69
248 249 7.903995 AAAGCTTTCTCACAATTTGAAAACA 57.096 28.000 5.69 0.00 32.21 2.83
249 250 8.496707 AAAGCTTTCTCACAATTTGAAAACAT 57.503 26.923 5.69 0.00 32.21 2.71
250 251 8.496707 AAGCTTTCTCACAATTTGAAAACATT 57.503 26.923 2.79 0.00 32.21 2.71
251 252 8.134905 AGCTTTCTCACAATTTGAAAACATTC 57.865 30.769 2.79 0.00 32.21 2.67
252 253 7.765360 AGCTTTCTCACAATTTGAAAACATTCA 59.235 29.630 2.79 0.00 32.21 2.57
253 254 8.553696 GCTTTCTCACAATTTGAAAACATTCAT 58.446 29.630 2.79 0.00 32.21 2.57
325 326 9.831737 AAATGAGATTCACGAGTTAGAAAAATG 57.168 29.630 0.00 0.00 0.00 2.32
326 327 7.962964 TGAGATTCACGAGTTAGAAAAATGT 57.037 32.000 0.00 0.00 0.00 2.71
327 328 8.378172 TGAGATTCACGAGTTAGAAAAATGTT 57.622 30.769 0.00 0.00 0.00 2.71
328 329 9.483916 TGAGATTCACGAGTTAGAAAAATGTTA 57.516 29.630 0.00 0.00 0.00 2.41
412 413 9.965824 ATTCACGTATTTTCAGAAAGACATTTT 57.034 25.926 9.52 0.00 36.92 1.82
413 414 9.796120 TTCACGTATTTTCAGAAAGACATTTTT 57.204 25.926 9.52 0.00 36.92 1.94
469 470 7.718334 AGGAAACTTGAAGAAGAAAAGGAAA 57.282 32.000 0.00 0.00 37.44 3.13
470 471 8.134202 AGGAAACTTGAAGAAGAAAAGGAAAA 57.866 30.769 0.00 0.00 37.44 2.29
471 472 8.593679 AGGAAACTTGAAGAAGAAAAGGAAAAA 58.406 29.630 0.00 0.00 37.44 1.94
541 542 9.772973 AAACAATATCTTTTAAGGAAAACCACC 57.227 29.630 0.00 0.00 31.23 4.61
542 543 7.599171 ACAATATCTTTTAAGGAAAACCACCG 58.401 34.615 0.00 0.00 31.23 4.94
543 544 7.449086 ACAATATCTTTTAAGGAAAACCACCGA 59.551 33.333 0.00 0.00 31.23 4.69
544 545 8.301002 CAATATCTTTTAAGGAAAACCACCGAA 58.699 33.333 0.00 0.00 31.23 4.30
545 546 5.761165 TCTTTTAAGGAAAACCACCGAAG 57.239 39.130 0.00 0.00 31.23 3.79
546 547 5.438833 TCTTTTAAGGAAAACCACCGAAGA 58.561 37.500 0.00 0.00 31.23 2.87
547 548 5.529800 TCTTTTAAGGAAAACCACCGAAGAG 59.470 40.000 0.00 0.00 31.23 2.85
548 549 1.605753 AAGGAAAACCACCGAAGAGC 58.394 50.000 0.00 0.00 0.00 4.09
549 550 0.472471 AGGAAAACCACCGAAGAGCA 59.528 50.000 0.00 0.00 0.00 4.26
550 551 1.073923 AGGAAAACCACCGAAGAGCAT 59.926 47.619 0.00 0.00 0.00 3.79
551 552 1.468914 GGAAAACCACCGAAGAGCATC 59.531 52.381 0.00 0.00 0.00 3.91
563 564 2.096596 GAGCATCTCCAACAGCAGC 58.903 57.895 0.00 0.00 0.00 5.25
564 565 1.375098 GAGCATCTCCAACAGCAGCC 61.375 60.000 0.00 0.00 0.00 4.85
565 566 2.413142 GCATCTCCAACAGCAGCCC 61.413 63.158 0.00 0.00 0.00 5.19
566 567 1.302285 CATCTCCAACAGCAGCCCT 59.698 57.895 0.00 0.00 0.00 5.19
567 568 0.543277 CATCTCCAACAGCAGCCCTA 59.457 55.000 0.00 0.00 0.00 3.53
568 569 1.142465 CATCTCCAACAGCAGCCCTAT 59.858 52.381 0.00 0.00 0.00 2.57
569 570 2.174685 TCTCCAACAGCAGCCCTATA 57.825 50.000 0.00 0.00 0.00 1.31
570 571 2.477245 TCTCCAACAGCAGCCCTATAA 58.523 47.619 0.00 0.00 0.00 0.98
571 572 2.843730 TCTCCAACAGCAGCCCTATAAA 59.156 45.455 0.00 0.00 0.00 1.40
572 573 3.459598 TCTCCAACAGCAGCCCTATAAAT 59.540 43.478 0.00 0.00 0.00 1.40
573 574 4.079787 TCTCCAACAGCAGCCCTATAAATT 60.080 41.667 0.00 0.00 0.00 1.82
574 575 5.131977 TCTCCAACAGCAGCCCTATAAATTA 59.868 40.000 0.00 0.00 0.00 1.40
575 576 5.952387 TCCAACAGCAGCCCTATAAATTAT 58.048 37.500 0.00 0.00 0.00 1.28
576 577 7.017155 TCTCCAACAGCAGCCCTATAAATTATA 59.983 37.037 0.00 0.00 0.00 0.98
577 578 7.522542 TCCAACAGCAGCCCTATAAATTATAA 58.477 34.615 0.00 0.00 0.00 0.98
578 579 7.665559 TCCAACAGCAGCCCTATAAATTATAAG 59.334 37.037 0.00 0.00 0.00 1.73
579 580 7.665559 CCAACAGCAGCCCTATAAATTATAAGA 59.334 37.037 0.00 0.00 0.00 2.10
580 581 9.066892 CAACAGCAGCCCTATAAATTATAAGAA 57.933 33.333 0.00 0.00 0.00 2.52
581 582 8.854614 ACAGCAGCCCTATAAATTATAAGAAG 57.145 34.615 0.00 0.00 0.00 2.85
582 583 7.885399 ACAGCAGCCCTATAAATTATAAGAAGG 59.115 37.037 0.00 0.00 0.00 3.46
583 584 7.885399 CAGCAGCCCTATAAATTATAAGAAGGT 59.115 37.037 0.00 0.00 0.00 3.50
584 585 9.112658 AGCAGCCCTATAAATTATAAGAAGGTA 57.887 33.333 0.00 0.00 0.00 3.08
585 586 9.907229 GCAGCCCTATAAATTATAAGAAGGTAT 57.093 33.333 0.00 0.00 0.00 2.73
600 601 7.856145 AAGAAGGTATTTAGAGCACAAGATG 57.144 36.000 0.00 0.00 0.00 2.90
601 602 6.352516 AGAAGGTATTTAGAGCACAAGATGG 58.647 40.000 0.00 0.00 0.00 3.51
602 603 4.455606 AGGTATTTAGAGCACAAGATGGC 58.544 43.478 0.00 0.00 0.00 4.40
603 604 4.080356 AGGTATTTAGAGCACAAGATGGCA 60.080 41.667 0.00 0.00 0.00 4.92
604 605 4.640201 GGTATTTAGAGCACAAGATGGCAA 59.360 41.667 0.00 0.00 0.00 4.52
605 606 5.125417 GGTATTTAGAGCACAAGATGGCAAA 59.875 40.000 0.00 0.00 0.00 3.68
606 607 5.726980 ATTTAGAGCACAAGATGGCAAAA 57.273 34.783 0.00 0.00 0.00 2.44
607 608 5.528043 TTTAGAGCACAAGATGGCAAAAA 57.472 34.783 0.00 0.00 0.00 1.94
626 627 4.600692 AAAACACCCTCAAATAGTTGCC 57.399 40.909 0.00 0.00 34.50 4.52
627 628 2.969821 ACACCCTCAAATAGTTGCCA 57.030 45.000 0.00 0.00 34.50 4.92
628 629 3.237268 ACACCCTCAAATAGTTGCCAA 57.763 42.857 0.00 0.00 34.50 4.52
629 630 3.778265 ACACCCTCAAATAGTTGCCAAT 58.222 40.909 0.00 0.00 34.50 3.16
630 631 4.159557 ACACCCTCAAATAGTTGCCAATT 58.840 39.130 0.00 0.00 34.50 2.32
631 632 4.220602 ACACCCTCAAATAGTTGCCAATTC 59.779 41.667 0.00 0.00 34.50 2.17
632 633 3.769300 ACCCTCAAATAGTTGCCAATTCC 59.231 43.478 0.00 0.00 34.50 3.01
633 634 4.026052 CCCTCAAATAGTTGCCAATTCCT 58.974 43.478 0.00 0.00 34.50 3.36
634 635 5.200483 CCCTCAAATAGTTGCCAATTCCTA 58.800 41.667 0.00 0.00 34.50 2.94
635 636 5.656416 CCCTCAAATAGTTGCCAATTCCTAA 59.344 40.000 0.00 0.00 34.50 2.69
636 637 6.405842 CCCTCAAATAGTTGCCAATTCCTAAC 60.406 42.308 0.00 0.00 34.50 2.34
637 638 6.152661 CCTCAAATAGTTGCCAATTCCTAACA 59.847 38.462 0.00 0.00 34.50 2.41
638 639 7.156876 TCAAATAGTTGCCAATTCCTAACAG 57.843 36.000 0.00 0.00 34.50 3.16
639 640 6.719370 TCAAATAGTTGCCAATTCCTAACAGT 59.281 34.615 0.00 0.00 34.50 3.55
640 641 6.759497 AATAGTTGCCAATTCCTAACAGTC 57.241 37.500 0.00 0.00 0.00 3.51
641 642 4.373156 AGTTGCCAATTCCTAACAGTCT 57.627 40.909 0.00 0.00 0.00 3.24
642 643 4.729868 AGTTGCCAATTCCTAACAGTCTT 58.270 39.130 0.00 0.00 0.00 3.01
643 644 4.520492 AGTTGCCAATTCCTAACAGTCTTG 59.480 41.667 0.00 0.00 0.00 3.02
644 645 2.819608 TGCCAATTCCTAACAGTCTTGC 59.180 45.455 0.00 0.00 0.00 4.01
645 646 2.819608 GCCAATTCCTAACAGTCTTGCA 59.180 45.455 0.00 0.00 0.00 4.08
646 647 3.255642 GCCAATTCCTAACAGTCTTGCAA 59.744 43.478 0.00 0.00 0.00 4.08
647 648 4.261994 GCCAATTCCTAACAGTCTTGCAAA 60.262 41.667 0.00 0.00 0.00 3.68
648 649 5.738783 GCCAATTCCTAACAGTCTTGCAAAA 60.739 40.000 0.00 0.00 0.00 2.44
649 650 6.279882 CCAATTCCTAACAGTCTTGCAAAAA 58.720 36.000 0.00 0.00 0.00 1.94
697 698 3.943958 CACCTCGTGCATCAAATATGTG 58.056 45.455 0.00 0.00 0.00 3.21
698 699 3.374988 CACCTCGTGCATCAAATATGTGT 59.625 43.478 0.00 0.00 0.00 3.72
699 700 3.623060 ACCTCGTGCATCAAATATGTGTC 59.377 43.478 0.00 0.00 0.00 3.67
700 701 3.622612 CCTCGTGCATCAAATATGTGTCA 59.377 43.478 0.00 0.00 0.00 3.58
701 702 4.260497 CCTCGTGCATCAAATATGTGTCAG 60.260 45.833 0.00 0.00 0.00 3.51
702 703 3.622612 TCGTGCATCAAATATGTGTCAGG 59.377 43.478 0.00 0.00 0.00 3.86
703 704 3.699067 GTGCATCAAATATGTGTCAGGC 58.301 45.455 0.00 0.00 0.00 4.85
704 705 3.129113 GTGCATCAAATATGTGTCAGGCA 59.871 43.478 0.00 0.00 0.00 4.75
705 706 3.762823 TGCATCAAATATGTGTCAGGCAA 59.237 39.130 0.00 0.00 0.00 4.52
706 707 4.107622 GCATCAAATATGTGTCAGGCAAC 58.892 43.478 0.00 0.00 0.00 4.17
707 708 4.675510 CATCAAATATGTGTCAGGCAACC 58.324 43.478 0.00 0.00 37.17 3.77
708 709 2.746904 TCAAATATGTGTCAGGCAACCG 59.253 45.455 0.00 0.00 37.17 4.44
709 710 1.750193 AATATGTGTCAGGCAACCGG 58.250 50.000 0.00 0.00 37.17 5.28
710 711 0.748005 ATATGTGTCAGGCAACCGGC 60.748 55.000 0.00 0.00 43.74 6.13
720 721 4.277593 CAACCGGCTGCCGCAAAA 62.278 61.111 34.33 0.00 46.86 2.44
721 722 4.279043 AACCGGCTGCCGCAAAAC 62.279 61.111 34.33 0.00 46.86 2.43
723 724 4.277593 CCGGCTGCCGCAAAACAA 62.278 61.111 34.33 0.00 46.86 2.83
724 725 2.279120 CGGCTGCCGCAAAACAAA 60.279 55.556 29.58 0.00 41.17 2.83
725 726 1.880340 CGGCTGCCGCAAAACAAAA 60.880 52.632 29.58 0.00 41.17 2.44
726 727 1.424493 CGGCTGCCGCAAAACAAAAA 61.424 50.000 29.58 0.00 41.17 1.94
727 728 0.027455 GGCTGCCGCAAAACAAAAAC 59.973 50.000 1.35 0.00 38.10 2.43
728 729 0.314979 GCTGCCGCAAAACAAAAACG 60.315 50.000 0.00 0.00 35.78 3.60
729 730 0.300193 CTGCCGCAAAACAAAAACGG 59.700 50.000 0.00 0.00 46.50 4.44
731 732 2.373938 CCGCAAAACAAAAACGGCA 58.626 47.368 0.00 0.00 37.05 5.69
732 733 0.300193 CCGCAAAACAAAAACGGCAG 59.700 50.000 0.00 0.00 37.05 4.85
733 734 0.314979 CGCAAAACAAAAACGGCAGC 60.315 50.000 0.00 0.00 0.00 5.25
734 735 0.027455 GCAAAACAAAAACGGCAGCC 59.973 50.000 0.00 0.00 0.00 4.85
735 736 0.655208 CAAAACAAAAACGGCAGCCC 59.345 50.000 5.63 0.00 0.00 5.19
736 737 0.250513 AAAACAAAAACGGCAGCCCA 59.749 45.000 5.63 0.00 0.00 5.36
737 738 0.461163 AAACAAAAACGGCAGCCCAC 60.461 50.000 5.63 0.00 0.00 4.61
738 739 2.028925 CAAAAACGGCAGCCCACC 59.971 61.111 5.63 0.00 0.00 4.61
739 740 3.230990 AAAAACGGCAGCCCACCC 61.231 61.111 5.63 0.00 0.00 4.61
740 741 4.531426 AAAACGGCAGCCCACCCA 62.531 61.111 5.63 0.00 0.00 4.51
760 761 4.430423 CGCAACCGCTCGCTCAAC 62.430 66.667 0.00 0.00 35.30 3.18
761 762 4.090057 GCAACCGCTCGCTCAACC 62.090 66.667 0.00 0.00 34.30 3.77
762 763 2.664851 CAACCGCTCGCTCAACCA 60.665 61.111 0.00 0.00 0.00 3.67
763 764 2.665185 AACCGCTCGCTCAACCAC 60.665 61.111 0.00 0.00 0.00 4.16
764 765 4.681978 ACCGCTCGCTCAACCACC 62.682 66.667 0.00 0.00 0.00 4.61
768 769 4.680237 CTCGCTCAACCACCCGCA 62.680 66.667 0.00 0.00 0.00 5.69
769 770 4.243008 TCGCTCAACCACCCGCAA 62.243 61.111 0.00 0.00 0.00 4.85
770 771 4.025401 CGCTCAACCACCCGCAAC 62.025 66.667 0.00 0.00 0.00 4.17
771 772 3.670377 GCTCAACCACCCGCAACC 61.670 66.667 0.00 0.00 0.00 3.77
772 773 2.203280 CTCAACCACCCGCAACCA 60.203 61.111 0.00 0.00 0.00 3.67
773 774 2.517402 TCAACCACCCGCAACCAC 60.517 61.111 0.00 0.00 0.00 4.16
774 775 2.830827 CAACCACCCGCAACCACA 60.831 61.111 0.00 0.00 0.00 4.17
775 776 2.831284 AACCACCCGCAACCACAC 60.831 61.111 0.00 0.00 0.00 3.82
776 777 3.352990 AACCACCCGCAACCACACT 62.353 57.895 0.00 0.00 0.00 3.55
777 778 2.978010 CCACCCGCAACCACACTC 60.978 66.667 0.00 0.00 0.00 3.51
778 779 2.978010 CACCCGCAACCACACTCC 60.978 66.667 0.00 0.00 0.00 3.85
779 780 3.168528 ACCCGCAACCACACTCCT 61.169 61.111 0.00 0.00 0.00 3.69
780 781 2.358737 CCCGCAACCACACTCCTC 60.359 66.667 0.00 0.00 0.00 3.71
781 782 2.358737 CCGCAACCACACTCCTCC 60.359 66.667 0.00 0.00 0.00 4.30
782 783 2.358737 CGCAACCACACTCCTCCC 60.359 66.667 0.00 0.00 0.00 4.30
783 784 2.034221 GCAACCACACTCCTCCCC 59.966 66.667 0.00 0.00 0.00 4.81
784 785 2.529744 GCAACCACACTCCTCCCCT 61.530 63.158 0.00 0.00 0.00 4.79
785 786 1.679898 CAACCACACTCCTCCCCTC 59.320 63.158 0.00 0.00 0.00 4.30
786 787 1.539124 AACCACACTCCTCCCCTCC 60.539 63.158 0.00 0.00 0.00 4.30
787 788 2.122729 CCACACTCCTCCCCTCCA 59.877 66.667 0.00 0.00 0.00 3.86
788 789 2.294078 CCACACTCCTCCCCTCCAC 61.294 68.421 0.00 0.00 0.00 4.02
789 790 2.122954 ACACTCCTCCCCTCCACC 59.877 66.667 0.00 0.00 0.00 4.61
790 791 3.077556 CACTCCTCCCCTCCACCG 61.078 72.222 0.00 0.00 0.00 4.94
791 792 4.400251 ACTCCTCCCCTCCACCGG 62.400 72.222 0.00 0.00 0.00 5.28
792 793 4.400251 CTCCTCCCCTCCACCGGT 62.400 72.222 0.00 0.00 0.00 5.28
793 794 4.715130 TCCTCCCCTCCACCGGTG 62.715 72.222 28.26 28.26 0.00 4.94
795 796 3.391382 CTCCCCTCCACCGGTGTC 61.391 72.222 31.80 0.00 0.00 3.67
796 797 4.242586 TCCCCTCCACCGGTGTCA 62.243 66.667 31.80 17.61 0.00 3.58
797 798 3.706373 CCCCTCCACCGGTGTCAG 61.706 72.222 31.80 25.03 0.00 3.51
798 799 2.603473 CCCTCCACCGGTGTCAGA 60.603 66.667 31.80 20.85 0.00 3.27
799 800 1.990060 CCCTCCACCGGTGTCAGAT 60.990 63.158 31.80 0.00 0.00 2.90
800 801 1.517832 CCTCCACCGGTGTCAGATC 59.482 63.158 31.80 0.00 0.00 2.75
801 802 0.972983 CCTCCACCGGTGTCAGATCT 60.973 60.000 31.80 0.00 0.00 2.75
802 803 0.174389 CTCCACCGGTGTCAGATCTG 59.826 60.000 31.80 17.07 0.00 2.90
803 804 0.541998 TCCACCGGTGTCAGATCTGT 60.542 55.000 31.80 0.00 0.00 3.41
804 805 0.390340 CCACCGGTGTCAGATCTGTG 60.390 60.000 31.80 9.70 0.00 3.66
805 806 0.390340 CACCGGTGTCAGATCTGTGG 60.390 60.000 26.95 17.50 0.00 4.17
806 807 1.448540 CCGGTGTCAGATCTGTGGC 60.449 63.158 21.92 13.63 0.00 5.01
807 808 1.593787 CGGTGTCAGATCTGTGGCT 59.406 57.895 21.92 0.00 0.00 4.75
808 809 0.817654 CGGTGTCAGATCTGTGGCTA 59.182 55.000 21.92 0.00 0.00 3.93
809 810 1.469940 CGGTGTCAGATCTGTGGCTAC 60.470 57.143 21.92 12.84 0.00 3.58
810 811 1.134670 GGTGTCAGATCTGTGGCTACC 60.135 57.143 21.92 17.89 0.00 3.18
811 812 0.817654 TGTCAGATCTGTGGCTACCG 59.182 55.000 21.92 0.00 0.00 4.02
812 813 0.528684 GTCAGATCTGTGGCTACCGC 60.529 60.000 21.92 0.00 34.12 5.68
813 814 0.970427 TCAGATCTGTGGCTACCGCA 60.970 55.000 21.92 0.00 42.15 5.69
814 815 0.807667 CAGATCTGTGGCTACCGCAC 60.808 60.000 14.95 0.00 39.28 5.34
815 816 1.521681 GATCTGTGGCTACCGCACC 60.522 63.158 0.00 0.00 39.28 5.01
816 817 2.925162 GATCTGTGGCTACCGCACCC 62.925 65.000 0.00 0.00 39.28 4.61
822 823 4.886121 GCTACCGCACCCGCCTAC 62.886 72.222 0.00 0.00 35.78 3.18
823 824 4.564116 CTACCGCACCCGCCTACG 62.564 72.222 0.00 0.00 39.67 3.51
834 835 3.583086 GCCTACGGCCCGATTTGC 61.583 66.667 11.71 2.69 44.06 3.68
835 836 2.189521 CCTACGGCCCGATTTGCT 59.810 61.111 11.71 0.00 0.00 3.91
836 837 1.451387 CCTACGGCCCGATTTGCTT 60.451 57.895 11.71 0.00 0.00 3.91
837 838 1.436983 CCTACGGCCCGATTTGCTTC 61.437 60.000 11.71 0.00 0.00 3.86
838 839 1.436983 CTACGGCCCGATTTGCTTCC 61.437 60.000 11.71 0.00 0.00 3.46
839 840 2.879813 TACGGCCCGATTTGCTTCCC 62.880 60.000 11.71 0.00 0.00 3.97
840 841 3.147595 GGCCCGATTTGCTTCCCC 61.148 66.667 0.00 0.00 0.00 4.81
841 842 3.518068 GCCCGATTTGCTTCCCCG 61.518 66.667 0.00 0.00 0.00 5.73
842 843 3.518068 CCCGATTTGCTTCCCCGC 61.518 66.667 0.00 0.00 0.00 6.13
843 844 3.518068 CCGATTTGCTTCCCCGCC 61.518 66.667 0.00 0.00 0.00 6.13
844 845 3.876198 CGATTTGCTTCCCCGCCG 61.876 66.667 0.00 0.00 0.00 6.46
845 846 4.193334 GATTTGCTTCCCCGCCGC 62.193 66.667 0.00 0.00 0.00 6.53
875 876 0.174845 CGCCGGTCTAAGGAATCACA 59.825 55.000 1.90 0.00 0.00 3.58
883 884 0.390603 TAAGGAATCACACCACCGCG 60.391 55.000 0.00 0.00 0.00 6.46
884 885 3.799755 GGAATCACACCACCGCGC 61.800 66.667 0.00 0.00 0.00 6.86
902 903 2.032981 CCCGTATTGCTGCCCAATC 58.967 57.895 0.00 0.00 42.99 2.67
905 906 1.455383 CGTATTGCTGCCCAATCCCC 61.455 60.000 0.00 0.00 42.99 4.81
926 927 3.116531 CCGACCCCGACGCTTTTC 61.117 66.667 0.00 0.00 38.22 2.29
928 929 2.031465 GACCCCGACGCTTTTCCA 59.969 61.111 0.00 0.00 0.00 3.53
933 934 2.391389 CCGACGCTTTTCCAGAGCC 61.391 63.158 0.00 0.00 36.81 4.70
1035 1036 1.490574 AGAGCTCCTTCGGCTACAAT 58.509 50.000 10.93 0.00 40.40 2.71
1038 1039 0.178068 GCTCCTTCGGCTACAATGGA 59.822 55.000 0.00 0.00 0.00 3.41
1039 1040 1.406887 GCTCCTTCGGCTACAATGGAA 60.407 52.381 0.00 0.00 0.00 3.53
1043 1044 0.326595 TTCGGCTACAATGGAAGGCA 59.673 50.000 10.90 0.00 38.13 4.75
1118 1119 0.179094 TGGCTCGACACTTTCACGTT 60.179 50.000 0.00 0.00 0.00 3.99
1123 1124 1.433053 CGACACTTTCACGTTGGCCA 61.433 55.000 0.00 0.00 0.00 5.36
1130 1131 1.107114 TTCACGTTGGCCAACATTGT 58.893 45.000 39.91 29.29 41.20 2.71
1137 1138 3.361977 GCCAACATTGTCGCCCGT 61.362 61.111 0.00 0.00 0.00 5.28
1161 1162 2.335369 GACGTCGCAGTGTGGAGT 59.665 61.111 0.00 4.30 0.00 3.85
1166 1167 1.300931 TCGCAGTGTGGAGTCTTGC 60.301 57.895 3.37 0.00 0.00 4.01
1193 1200 1.141449 CGAAGCTCAGCCTGGAGAG 59.859 63.158 11.03 11.03 37.05 3.20
1213 1220 2.351276 GGACTTGGGCGGATGTGT 59.649 61.111 0.00 0.00 0.00 3.72
1259 1269 2.822215 GGTTGAGCCCGATCTAGGA 58.178 57.895 2.94 0.00 0.00 2.94
1266 1280 1.148027 AGCCCGATCTAGGATCCTCAA 59.852 52.381 20.22 8.12 0.00 3.02
1278 1292 8.195165 TCTAGGATCCTCAAATTGTTATCGAT 57.805 34.615 20.22 2.16 0.00 3.59
1287 1301 7.278646 CCTCAAATTGTTATCGATGAGTGAGAA 59.721 37.037 8.54 0.00 34.03 2.87
1297 1311 6.220726 TCGATGAGTGAGAAAACATCCATA 57.779 37.500 0.00 0.00 36.71 2.74
1356 1370 2.238144 ACATCCAGAGTATGTGCAAGCT 59.762 45.455 0.00 0.00 36.24 3.74
1366 1380 0.035881 TGTGCAAGCTGAGAGGGAAG 59.964 55.000 0.00 0.00 0.00 3.46
1376 1393 3.702792 CTGAGAGGGAAGTCTACTGGAA 58.297 50.000 0.00 0.00 0.00 3.53
1393 1413 1.276705 GGAAGAAGAAGGCCGAGAAGT 59.723 52.381 0.00 0.00 0.00 3.01
1407 1427 2.926200 CGAGAAGTGCAAGAATGACGAT 59.074 45.455 0.00 0.00 0.00 3.73
1440 1460 4.142182 CCTTCCTTGTCACAAAGCAAGAAA 60.142 41.667 5.93 0.00 43.29 2.52
1442 1462 4.997565 TCCTTGTCACAAAGCAAGAAAAG 58.002 39.130 5.93 0.00 43.29 2.27
1458 1478 3.919554 AGAAAAGGAAGAATGGAGGAGGT 59.080 43.478 0.00 0.00 0.00 3.85
1486 1518 2.668457 GTGGTCAACATCATCGAGTGAC 59.332 50.000 0.00 0.00 40.28 3.67
1497 1529 2.479650 GAGTGACGAGTCCGACGG 59.520 66.667 7.84 7.84 39.50 4.79
1498 1530 3.664223 GAGTGACGAGTCCGACGGC 62.664 68.421 9.66 4.47 39.50 5.68
1501 1533 2.181021 GACGAGTCCGACGGCATT 59.819 61.111 9.66 0.00 38.75 3.56
1505 1537 1.810030 GAGTCCGACGGCATTGACC 60.810 63.158 9.66 0.00 0.00 4.02
1535 1577 8.833493 ACAATGTGTAGTTTAAAGTTGGTAGTC 58.167 33.333 0.00 0.00 0.00 2.59
1599 1647 9.820229 GTATTTGAACTATGTTTTTGTCGATCA 57.180 29.630 0.00 0.00 0.00 2.92
1648 1697 9.869844 CTGAAGTAGTTCAAATGTTTAGTTCAG 57.130 33.333 13.85 10.99 42.27 3.02
1792 1843 6.119536 TGTCGCTTGAATATAGAATTTGGGT 58.880 36.000 0.00 0.00 0.00 4.51
1798 1849 7.519008 GCTTGAATATAGAATTTGGGTCAGTCG 60.519 40.741 0.00 0.00 0.00 4.18
1806 1857 5.711976 AGAATTTGGGTCAGTCGATTTTCAT 59.288 36.000 0.00 0.00 0.00 2.57
1819 1870 4.695455 TCGATTTTCATGTGAAGGAAGGAC 59.305 41.667 0.00 0.00 35.21 3.85
1820 1871 4.142600 CGATTTTCATGTGAAGGAAGGACC 60.143 45.833 0.00 0.00 35.21 4.46
1844 1895 2.301296 CCAGAGTGAAGGAAGAAGCTCA 59.699 50.000 0.00 0.00 0.00 4.26
1845 1896 3.055240 CCAGAGTGAAGGAAGAAGCTCAT 60.055 47.826 0.00 0.00 0.00 2.90
1854 1905 1.068434 GAAGAAGCTCATCGGAGGGAG 59.932 57.143 5.38 5.38 41.67 4.30
1903 1954 0.837272 TATCTTACTGTGGCAGGGGC 59.163 55.000 0.00 0.00 35.51 5.80
1929 1981 6.054860 CCCATTATCTATCTTAGGGGTGTG 57.945 45.833 0.00 0.00 0.00 3.82
1941 1993 4.531426 GGTGTGGGGGTGGTGCAA 62.531 66.667 0.00 0.00 0.00 4.08
1947 1999 1.528309 GGGGGTGGTGCAATATCGG 60.528 63.158 0.00 0.00 0.00 4.18
1949 2001 1.453015 GGGTGGTGCAATATCGGCA 60.453 57.895 0.00 0.00 39.32 5.69
1950 2002 1.447317 GGGTGGTGCAATATCGGCAG 61.447 60.000 2.51 0.00 42.85 4.85
1979 2032 2.122369 AATCCCCGGGGCTAGAGG 60.122 66.667 36.68 9.85 34.68 3.69
1984 2037 2.201490 CCGGGGCTAGAGGGATGA 59.799 66.667 0.00 0.00 0.00 2.92
1986 2039 2.210711 CGGGGCTAGAGGGATGACC 61.211 68.421 0.00 0.00 40.67 4.02
2027 2083 1.392534 GAGGAGGTTGAGGGGAGGA 59.607 63.158 0.00 0.00 0.00 3.71
2032 2088 2.606826 GTTGAGGGGAGGACGGGT 60.607 66.667 0.00 0.00 0.00 5.28
2033 2089 2.606519 TTGAGGGGAGGACGGGTG 60.607 66.667 0.00 0.00 0.00 4.61
2034 2090 3.477956 TTGAGGGGAGGACGGGTGT 62.478 63.158 0.00 0.00 0.00 4.16
2035 2091 2.606826 GAGGGGAGGACGGGTGTT 60.607 66.667 0.00 0.00 0.00 3.32
2036 2092 2.928396 AGGGGAGGACGGGTGTTG 60.928 66.667 0.00 0.00 0.00 3.33
2037 2093 2.926242 GGGGAGGACGGGTGTTGA 60.926 66.667 0.00 0.00 0.00 3.18
2038 2094 2.346365 GGGAGGACGGGTGTTGAC 59.654 66.667 0.00 0.00 0.00 3.18
2039 2095 2.513259 GGGAGGACGGGTGTTGACA 61.513 63.158 0.00 0.00 0.00 3.58
2040 2096 1.301479 GGAGGACGGGTGTTGACAC 60.301 63.158 5.72 5.72 45.72 3.67
2063 2119 6.173191 CCAGATTTTGGCATGATCAAAAAC 57.827 37.500 22.26 20.19 44.10 2.43
2064 2120 5.701750 CCAGATTTTGGCATGATCAAAAACA 59.298 36.000 22.26 8.49 44.10 2.83
2065 2121 6.373216 CCAGATTTTGGCATGATCAAAAACAT 59.627 34.615 22.26 12.19 44.10 2.71
2066 2122 7.549842 CCAGATTTTGGCATGATCAAAAACATA 59.450 33.333 22.26 7.97 44.10 2.29
2067 2123 8.937884 CAGATTTTGGCATGATCAAAAACATAA 58.062 29.630 22.26 0.00 44.10 1.90
2068 2124 9.675464 AGATTTTGGCATGATCAAAAACATAAT 57.325 25.926 22.26 11.19 44.10 1.28
2078 2134 9.822185 ATGATCAAAAACATAATTAAGAAGGCC 57.178 29.630 0.00 0.00 0.00 5.19
2079 2135 9.034800 TGATCAAAAACATAATTAAGAAGGCCT 57.965 29.630 0.00 0.00 0.00 5.19
2080 2136 9.521503 GATCAAAAACATAATTAAGAAGGCCTC 57.478 33.333 5.23 0.00 0.00 4.70
2081 2137 8.415950 TCAAAAACATAATTAAGAAGGCCTCA 57.584 30.769 5.23 0.00 0.00 3.86
2082 2138 8.865090 TCAAAAACATAATTAAGAAGGCCTCAA 58.135 29.630 5.23 0.00 0.00 3.02
2083 2139 9.487790 CAAAAACATAATTAAGAAGGCCTCAAA 57.512 29.630 5.23 0.00 0.00 2.69
2085 2141 9.657419 AAAACATAATTAAGAAGGCCTCAAATG 57.343 29.630 5.23 4.58 0.00 2.32
2086 2142 7.352079 ACATAATTAAGAAGGCCTCAAATGG 57.648 36.000 5.23 0.91 0.00 3.16
2087 2143 7.125391 ACATAATTAAGAAGGCCTCAAATGGA 58.875 34.615 5.23 0.00 0.00 3.41
2088 2144 7.619302 ACATAATTAAGAAGGCCTCAAATGGAA 59.381 33.333 5.23 0.00 0.00 3.53
2089 2145 6.933514 AATTAAGAAGGCCTCAAATGGAAA 57.066 33.333 5.23 0.00 0.00 3.13
2090 2146 6.933514 ATTAAGAAGGCCTCAAATGGAAAA 57.066 33.333 5.23 0.00 0.00 2.29
2091 2147 4.879197 AAGAAGGCCTCAAATGGAAAAG 57.121 40.909 5.23 0.00 0.00 2.27
2092 2148 3.849527 AGAAGGCCTCAAATGGAAAAGT 58.150 40.909 5.23 0.00 0.00 2.66
2093 2149 4.998051 AGAAGGCCTCAAATGGAAAAGTA 58.002 39.130 5.23 0.00 0.00 2.24
2094 2150 4.767409 AGAAGGCCTCAAATGGAAAAGTAC 59.233 41.667 5.23 0.00 0.00 2.73
2095 2151 4.388577 AGGCCTCAAATGGAAAAGTACT 57.611 40.909 0.00 0.00 0.00 2.73
2096 2152 4.336280 AGGCCTCAAATGGAAAAGTACTC 58.664 43.478 0.00 0.00 0.00 2.59
2097 2153 4.079253 GGCCTCAAATGGAAAAGTACTCA 58.921 43.478 0.00 0.00 0.00 3.41
2098 2154 4.522789 GGCCTCAAATGGAAAAGTACTCAA 59.477 41.667 0.00 0.00 0.00 3.02
2099 2155 5.010617 GGCCTCAAATGGAAAAGTACTCAAA 59.989 40.000 0.00 0.00 0.00 2.69
2100 2156 6.152379 GCCTCAAATGGAAAAGTACTCAAAG 58.848 40.000 0.00 0.00 0.00 2.77
2101 2157 6.152379 CCTCAAATGGAAAAGTACTCAAAGC 58.848 40.000 0.00 0.00 0.00 3.51
2102 2158 5.757886 TCAAATGGAAAAGTACTCAAAGCG 58.242 37.500 0.00 0.00 0.00 4.68
2103 2159 5.529430 TCAAATGGAAAAGTACTCAAAGCGA 59.471 36.000 0.00 0.00 0.00 4.93
2105 2161 4.330944 TGGAAAAGTACTCAAAGCGAGA 57.669 40.909 0.00 0.00 45.45 4.04
2106 2162 4.699637 TGGAAAAGTACTCAAAGCGAGAA 58.300 39.130 0.00 0.00 45.45 2.87
2107 2163 5.120399 TGGAAAAGTACTCAAAGCGAGAAA 58.880 37.500 0.00 0.00 45.45 2.52
2108 2164 5.236478 TGGAAAAGTACTCAAAGCGAGAAAG 59.764 40.000 0.00 0.00 45.45 2.62
2109 2165 5.236695 GGAAAAGTACTCAAAGCGAGAAAGT 59.763 40.000 0.00 0.00 45.45 2.66
2110 2166 6.238402 GGAAAAGTACTCAAAGCGAGAAAGTT 60.238 38.462 0.00 0.00 45.45 2.66
2111 2167 6.679327 AAAGTACTCAAAGCGAGAAAGTTT 57.321 33.333 0.00 0.00 45.45 2.66
2112 2168 6.679327 AAGTACTCAAAGCGAGAAAGTTTT 57.321 33.333 0.00 0.00 45.45 2.43
2113 2169 6.049263 AGTACTCAAAGCGAGAAAGTTTTG 57.951 37.500 0.00 0.89 45.45 2.44
2114 2170 4.965119 ACTCAAAGCGAGAAAGTTTTGT 57.035 36.364 6.28 0.00 45.45 2.83
2115 2171 6.759827 AGTACTCAAAGCGAGAAAGTTTTGTA 59.240 34.615 0.00 0.00 45.45 2.41
2116 2172 6.619801 ACTCAAAGCGAGAAAGTTTTGTAT 57.380 33.333 6.28 0.00 45.45 2.29
2117 2173 6.659776 ACTCAAAGCGAGAAAGTTTTGTATC 58.340 36.000 6.28 0.00 45.45 2.24
2118 2174 5.675970 TCAAAGCGAGAAAGTTTTGTATCG 58.324 37.500 6.28 8.31 41.18 2.92
2119 2175 5.235616 TCAAAGCGAGAAAGTTTTGTATCGT 59.764 36.000 12.13 1.84 41.18 3.73
2120 2176 4.905412 AGCGAGAAAGTTTTGTATCGTC 57.095 40.909 12.13 7.18 32.98 4.20
2121 2177 4.304110 AGCGAGAAAGTTTTGTATCGTCA 58.696 39.130 12.13 0.00 32.98 4.35
2122 2178 4.748102 AGCGAGAAAGTTTTGTATCGTCAA 59.252 37.500 12.13 0.00 32.98 3.18
2123 2179 5.235616 AGCGAGAAAGTTTTGTATCGTCAAA 59.764 36.000 12.13 0.00 35.83 2.69
2124 2180 5.905181 GCGAGAAAGTTTTGTATCGTCAAAA 59.095 36.000 12.13 10.09 42.50 2.44
2125 2181 6.085068 GCGAGAAAGTTTTGTATCGTCAAAAG 59.915 38.462 12.92 5.05 44.37 2.27
2126 2182 6.573725 CGAGAAAGTTTTGTATCGTCAAAAGG 59.426 38.462 12.92 0.00 44.37 3.11
2127 2183 7.517734 CGAGAAAGTTTTGTATCGTCAAAAGGA 60.518 37.037 12.92 0.00 44.37 3.36
2128 2184 7.639945 AGAAAGTTTTGTATCGTCAAAAGGAG 58.360 34.615 12.92 0.00 44.37 3.69
2129 2185 7.497909 AGAAAGTTTTGTATCGTCAAAAGGAGA 59.502 33.333 12.92 0.00 44.37 3.71
2130 2186 7.562454 AAGTTTTGTATCGTCAAAAGGAGAA 57.438 32.000 12.92 0.00 44.37 2.87
2131 2187 7.562454 AGTTTTGTATCGTCAAAAGGAGAAA 57.438 32.000 12.92 0.00 44.37 2.52
2132 2188 7.415229 AGTTTTGTATCGTCAAAAGGAGAAAC 58.585 34.615 12.92 0.00 44.37 2.78
2133 2189 7.282450 AGTTTTGTATCGTCAAAAGGAGAAACT 59.718 33.333 12.92 0.00 44.37 2.66
2134 2190 7.562454 TTTGTATCGTCAAAAGGAGAAACTT 57.438 32.000 0.00 0.00 34.90 2.66
2135 2191 7.562454 TTGTATCGTCAAAAGGAGAAACTTT 57.438 32.000 0.00 0.00 42.17 2.66
2136 2192 6.954944 TGTATCGTCAAAAGGAGAAACTTTG 58.045 36.000 0.00 0.00 40.36 2.77
2137 2193 6.764085 TGTATCGTCAAAAGGAGAAACTTTGA 59.236 34.615 0.00 0.00 40.36 2.69
2138 2194 6.884280 ATCGTCAAAAGGAGAAACTTTGAT 57.116 33.333 0.33 0.00 40.36 2.57
2139 2195 7.979444 ATCGTCAAAAGGAGAAACTTTGATA 57.021 32.000 0.33 0.00 40.36 2.15
2140 2196 7.979444 TCGTCAAAAGGAGAAACTTTGATAT 57.021 32.000 0.33 0.00 40.36 1.63
2141 2197 8.391075 TCGTCAAAAGGAGAAACTTTGATATT 57.609 30.769 0.33 0.00 40.36 1.28
2142 2198 8.846211 TCGTCAAAAGGAGAAACTTTGATATTT 58.154 29.630 0.33 0.00 40.36 1.40
2143 2199 8.905702 CGTCAAAAGGAGAAACTTTGATATTTG 58.094 33.333 0.33 0.00 40.36 2.32
2144 2200 9.196552 GTCAAAAGGAGAAACTTTGATATTTGG 57.803 33.333 0.33 0.00 40.36 3.28
2145 2201 8.367156 TCAAAAGGAGAAACTTTGATATTTGGG 58.633 33.333 0.00 0.00 40.36 4.12
2146 2202 5.921962 AGGAGAAACTTTGATATTTGGGC 57.078 39.130 0.00 0.00 0.00 5.36
2147 2203 4.711846 AGGAGAAACTTTGATATTTGGGCC 59.288 41.667 0.00 0.00 0.00 5.80
2148 2204 4.466015 GGAGAAACTTTGATATTTGGGCCA 59.534 41.667 0.00 0.00 0.00 5.36
2149 2205 5.129320 GGAGAAACTTTGATATTTGGGCCAT 59.871 40.000 7.26 0.00 0.00 4.40
2150 2206 6.323739 GGAGAAACTTTGATATTTGGGCCATA 59.676 38.462 7.26 1.88 0.00 2.74
2151 2207 7.352079 AGAAACTTTGATATTTGGGCCATAG 57.648 36.000 7.26 0.00 0.00 2.23
2152 2208 5.535753 AACTTTGATATTTGGGCCATAGC 57.464 39.130 7.26 0.22 38.76 2.97
2163 2219 3.450028 GCCATAGCCATCCGATCTC 57.550 57.895 0.00 0.00 0.00 2.75
2164 2220 0.610174 GCCATAGCCATCCGATCTCA 59.390 55.000 0.00 0.00 0.00 3.27
2165 2221 1.209019 GCCATAGCCATCCGATCTCAT 59.791 52.381 0.00 0.00 0.00 2.90
2166 2222 2.741228 GCCATAGCCATCCGATCTCATC 60.741 54.545 0.00 0.00 0.00 2.92
2167 2223 2.765135 CCATAGCCATCCGATCTCATCT 59.235 50.000 0.00 0.00 0.00 2.90
2168 2224 3.181477 CCATAGCCATCCGATCTCATCTC 60.181 52.174 0.00 0.00 0.00 2.75
2169 2225 2.307496 AGCCATCCGATCTCATCTCT 57.693 50.000 0.00 0.00 0.00 3.10
2170 2226 3.448093 AGCCATCCGATCTCATCTCTA 57.552 47.619 0.00 0.00 0.00 2.43
2171 2227 3.772387 AGCCATCCGATCTCATCTCTAA 58.228 45.455 0.00 0.00 0.00 2.10
2172 2228 3.763360 AGCCATCCGATCTCATCTCTAAG 59.237 47.826 0.00 0.00 0.00 2.18
2173 2229 3.119173 GCCATCCGATCTCATCTCTAAGG 60.119 52.174 0.00 0.00 0.00 2.69
2174 2230 4.339748 CCATCCGATCTCATCTCTAAGGA 58.660 47.826 0.00 0.00 0.00 3.36
2175 2231 4.955450 CCATCCGATCTCATCTCTAAGGAT 59.045 45.833 0.00 0.00 37.70 3.24
2176 2232 5.893687 CATCCGATCTCATCTCTAAGGATG 58.106 45.833 6.73 6.73 44.97 3.51
2177 2233 5.248380 TCCGATCTCATCTCTAAGGATGA 57.752 43.478 6.92 6.92 46.50 2.92
2187 2243 8.868522 TCATCTCTAAGGATGAAAATGTGTTT 57.131 30.769 4.91 0.00 45.95 2.83
2188 2244 8.733458 TCATCTCTAAGGATGAAAATGTGTTTG 58.267 33.333 4.91 0.00 45.95 2.93
2189 2245 8.733458 CATCTCTAAGGATGAAAATGTGTTTGA 58.267 33.333 0.00 0.00 44.01 2.69
2190 2246 8.690203 TCTCTAAGGATGAAAATGTGTTTGAA 57.310 30.769 0.00 0.00 0.00 2.69
2191 2247 8.786898 TCTCTAAGGATGAAAATGTGTTTGAAG 58.213 33.333 0.00 0.00 0.00 3.02
2192 2248 8.463930 TCTAAGGATGAAAATGTGTTTGAAGT 57.536 30.769 0.00 0.00 0.00 3.01
2193 2249 9.567776 TCTAAGGATGAAAATGTGTTTGAAGTA 57.432 29.630 0.00 0.00 0.00 2.24
2194 2250 9.612620 CTAAGGATGAAAATGTGTTTGAAGTAC 57.387 33.333 0.00 0.00 0.00 2.73
2195 2251 7.823745 AGGATGAAAATGTGTTTGAAGTACT 57.176 32.000 0.00 0.00 0.00 2.73
2196 2252 8.918202 AGGATGAAAATGTGTTTGAAGTACTA 57.082 30.769 0.00 0.00 0.00 1.82
2197 2253 9.349713 AGGATGAAAATGTGTTTGAAGTACTAA 57.650 29.630 0.00 0.00 0.00 2.24
2198 2254 9.612620 GGATGAAAATGTGTTTGAAGTACTAAG 57.387 33.333 0.00 0.00 0.00 2.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 9.787532 CATGACAGAATTGGTACGAAAATTATT 57.212 29.630 0.00 0.00 0.00 1.40
23 24 9.173021 TCATGACAGAATTGGTACGAAAATTAT 57.827 29.630 0.00 0.00 0.00 1.28
24 25 8.554835 TCATGACAGAATTGGTACGAAAATTA 57.445 30.769 0.00 0.00 0.00 1.40
25 26 7.447374 TCATGACAGAATTGGTACGAAAATT 57.553 32.000 0.00 0.00 0.00 1.82
26 27 7.447374 TTCATGACAGAATTGGTACGAAAAT 57.553 32.000 0.00 0.00 0.00 1.82
27 28 6.869315 TTCATGACAGAATTGGTACGAAAA 57.131 33.333 0.00 0.00 0.00 2.29
28 29 6.869315 TTTCATGACAGAATTGGTACGAAA 57.131 33.333 0.00 0.00 0.00 3.46
29 30 8.554835 TTATTTCATGACAGAATTGGTACGAA 57.445 30.769 0.00 0.00 0.00 3.85
30 31 8.554835 TTTATTTCATGACAGAATTGGTACGA 57.445 30.769 0.00 0.00 0.00 3.43
31 32 9.619316 TTTTTATTTCATGACAGAATTGGTACG 57.381 29.630 0.00 0.00 0.00 3.67
38 39 9.985730 ACACACATTTTTATTTCATGACAGAAT 57.014 25.926 0.00 0.00 0.00 2.40
39 40 9.814899 AACACACATTTTTATTTCATGACAGAA 57.185 25.926 0.00 0.00 0.00 3.02
40 41 9.462174 GAACACACATTTTTATTTCATGACAGA 57.538 29.630 0.00 0.00 0.00 3.41
41 42 9.467258 AGAACACACATTTTTATTTCATGACAG 57.533 29.630 0.00 0.00 0.00 3.51
42 43 9.814899 AAGAACACACATTTTTATTTCATGACA 57.185 25.926 0.00 0.00 0.00 3.58
82 83 9.104965 GGGCACTTTTTAAAAGATTTTAACACT 57.895 29.630 22.31 0.00 40.99 3.55
83 84 8.884726 TGGGCACTTTTTAAAAGATTTTAACAC 58.115 29.630 22.31 6.46 40.99 3.32
84 85 8.884726 GTGGGCACTTTTTAAAAGATTTTAACA 58.115 29.630 22.31 9.60 40.99 2.41
85 86 8.884726 TGTGGGCACTTTTTAAAAGATTTTAAC 58.115 29.630 22.31 13.12 40.99 2.01
86 87 9.620259 ATGTGGGCACTTTTTAAAAGATTTTAA 57.380 25.926 22.31 6.44 39.94 1.52
88 89 9.791801 ATATGTGGGCACTTTTTAAAAGATTTT 57.208 25.926 22.31 0.00 0.00 1.82
89 90 9.791801 AATATGTGGGCACTTTTTAAAAGATTT 57.208 25.926 22.31 0.00 0.00 2.17
90 91 9.791801 AAATATGTGGGCACTTTTTAAAAGATT 57.208 25.926 22.31 6.86 0.00 2.40
91 92 9.791801 AAAATATGTGGGCACTTTTTAAAAGAT 57.208 25.926 22.31 7.43 0.00 2.40
92 93 9.267084 GAAAATATGTGGGCACTTTTTAAAAGA 57.733 29.630 22.31 0.29 0.00 2.52
93 94 9.271828 AGAAAATATGTGGGCACTTTTTAAAAG 57.728 29.630 15.03 15.03 0.00 2.27
94 95 9.620259 AAGAAAATATGTGGGCACTTTTTAAAA 57.380 25.926 0.00 0.00 0.00 1.52
96 97 9.921637 CTAAGAAAATATGTGGGCACTTTTTAA 57.078 29.630 0.00 0.00 0.00 1.52
97 98 9.303116 TCTAAGAAAATATGTGGGCACTTTTTA 57.697 29.630 0.00 0.00 0.00 1.52
98 99 8.189119 TCTAAGAAAATATGTGGGCACTTTTT 57.811 30.769 0.00 0.00 0.00 1.94
99 100 7.775053 TCTAAGAAAATATGTGGGCACTTTT 57.225 32.000 0.00 0.00 0.00 2.27
100 101 7.961326 ATCTAAGAAAATATGTGGGCACTTT 57.039 32.000 0.00 0.00 0.00 2.66
101 102 7.961326 AATCTAAGAAAATATGTGGGCACTT 57.039 32.000 0.00 0.00 0.00 3.16
102 103 7.961326 AAATCTAAGAAAATATGTGGGCACT 57.039 32.000 0.00 0.00 0.00 4.40
129 130 9.716531 TGCACCATCATTTTATAAAATTCACAA 57.283 25.926 18.72 5.33 36.52 3.33
130 131 9.716531 TTGCACCATCATTTTATAAAATTCACA 57.283 25.926 18.72 9.12 36.52 3.58
144 145 9.807649 GAATACTTAGAAAATTGCACCATCATT 57.192 29.630 0.00 0.00 0.00 2.57
145 146 8.970020 TGAATACTTAGAAAATTGCACCATCAT 58.030 29.630 0.00 0.00 0.00 2.45
146 147 8.347004 TGAATACTTAGAAAATTGCACCATCA 57.653 30.769 0.00 0.00 0.00 3.07
147 148 9.807649 AATGAATACTTAGAAAATTGCACCATC 57.192 29.630 0.00 0.00 0.00 3.51
203 204 9.884636 AGCTTTAAAAACATAAGTGAAAACCTT 57.115 25.926 0.00 0.00 0.00 3.50
204 205 9.884636 AAGCTTTAAAAACATAAGTGAAAACCT 57.115 25.926 0.00 0.00 0.00 3.50
210 211 9.730420 GTGAGAAAGCTTTAAAAACATAAGTGA 57.270 29.630 12.68 0.00 0.00 3.41
211 212 9.515020 TGTGAGAAAGCTTTAAAAACATAAGTG 57.485 29.630 12.68 0.00 0.00 3.16
217 218 9.429359 TCAAATTGTGAGAAAGCTTTAAAAACA 57.571 25.926 12.68 11.42 0.00 2.83
222 223 9.429359 TGTTTTCAAATTGTGAGAAAGCTTTAA 57.571 25.926 12.68 2.47 37.61 1.52
223 224 8.994429 TGTTTTCAAATTGTGAGAAAGCTTTA 57.006 26.923 12.68 0.00 37.61 1.85
224 225 7.903995 TGTTTTCAAATTGTGAGAAAGCTTT 57.096 28.000 12.53 12.53 37.61 3.51
225 226 8.496707 AATGTTTTCAAATTGTGAGAAAGCTT 57.503 26.923 0.00 0.00 37.61 3.74
226 227 7.765360 TGAATGTTTTCAAATTGTGAGAAAGCT 59.235 29.630 0.00 0.00 38.90 3.74
227 228 7.908230 TGAATGTTTTCAAATTGTGAGAAAGC 58.092 30.769 0.00 0.00 38.90 3.51
299 300 9.831737 CATTTTTCTAACTCGTGAATCTCATTT 57.168 29.630 0.00 0.00 0.00 2.32
300 301 9.003658 ACATTTTTCTAACTCGTGAATCTCATT 57.996 29.630 0.00 0.00 0.00 2.57
301 302 8.553459 ACATTTTTCTAACTCGTGAATCTCAT 57.447 30.769 0.00 0.00 0.00 2.90
302 303 7.962964 ACATTTTTCTAACTCGTGAATCTCA 57.037 32.000 0.00 0.00 0.00 3.27
386 387 9.965824 AAAATGTCTTTCTGAAAATACGTGAAT 57.034 25.926 0.00 0.00 0.00 2.57
387 388 9.796120 AAAAATGTCTTTCTGAAAATACGTGAA 57.204 25.926 0.00 0.00 0.00 3.18
441 442 8.593679 TCCTTTTCTTCTTCAAGTTTCCTTTTT 58.406 29.630 0.00 0.00 0.00 1.94
442 443 8.134202 TCCTTTTCTTCTTCAAGTTTCCTTTT 57.866 30.769 0.00 0.00 0.00 2.27
443 444 7.718334 TCCTTTTCTTCTTCAAGTTTCCTTT 57.282 32.000 0.00 0.00 0.00 3.11
444 445 7.718334 TTCCTTTTCTTCTTCAAGTTTCCTT 57.282 32.000 0.00 0.00 0.00 3.36
445 446 7.718334 TTTCCTTTTCTTCTTCAAGTTTCCT 57.282 32.000 0.00 0.00 0.00 3.36
446 447 8.771920 TTTTTCCTTTTCTTCTTCAAGTTTCC 57.228 30.769 0.00 0.00 0.00 3.13
515 516 9.772973 GGTGGTTTTCCTTAAAAGATATTGTTT 57.227 29.630 0.00 0.00 41.38 2.83
516 517 8.085909 CGGTGGTTTTCCTTAAAAGATATTGTT 58.914 33.333 0.00 0.00 41.38 2.83
517 518 7.449086 TCGGTGGTTTTCCTTAAAAGATATTGT 59.551 33.333 0.00 0.00 41.38 2.71
518 519 7.822658 TCGGTGGTTTTCCTTAAAAGATATTG 58.177 34.615 0.00 0.00 41.38 1.90
519 520 8.411991 TTCGGTGGTTTTCCTTAAAAGATATT 57.588 30.769 0.00 0.00 41.38 1.28
520 521 7.886446 TCTTCGGTGGTTTTCCTTAAAAGATAT 59.114 33.333 0.00 0.00 41.38 1.63
521 522 7.225725 TCTTCGGTGGTTTTCCTTAAAAGATA 58.774 34.615 0.00 0.00 41.38 1.98
522 523 6.066032 TCTTCGGTGGTTTTCCTTAAAAGAT 58.934 36.000 0.00 0.00 41.38 2.40
523 524 5.438833 TCTTCGGTGGTTTTCCTTAAAAGA 58.561 37.500 0.00 0.00 41.38 2.52
524 525 5.758924 CTCTTCGGTGGTTTTCCTTAAAAG 58.241 41.667 0.00 0.00 41.38 2.27
525 526 4.037089 GCTCTTCGGTGGTTTTCCTTAAAA 59.963 41.667 0.00 0.00 41.38 1.52
526 527 3.566742 GCTCTTCGGTGGTTTTCCTTAAA 59.433 43.478 0.00 0.00 41.38 1.52
527 528 3.143728 GCTCTTCGGTGGTTTTCCTTAA 58.856 45.455 0.00 0.00 41.38 1.85
528 529 2.105134 TGCTCTTCGGTGGTTTTCCTTA 59.895 45.455 0.00 0.00 41.38 2.69
529 530 1.133915 TGCTCTTCGGTGGTTTTCCTT 60.134 47.619 0.00 0.00 41.38 3.36
530 531 0.472471 TGCTCTTCGGTGGTTTTCCT 59.528 50.000 0.00 0.00 41.38 3.36
531 532 1.468914 GATGCTCTTCGGTGGTTTTCC 59.531 52.381 0.00 0.00 41.14 3.13
532 533 2.416893 GAGATGCTCTTCGGTGGTTTTC 59.583 50.000 0.00 0.00 0.00 2.29
533 534 2.427506 GAGATGCTCTTCGGTGGTTTT 58.572 47.619 0.00 0.00 0.00 2.43
534 535 1.339151 GGAGATGCTCTTCGGTGGTTT 60.339 52.381 0.00 0.00 0.00 3.27
535 536 0.250513 GGAGATGCTCTTCGGTGGTT 59.749 55.000 0.00 0.00 0.00 3.67
536 537 0.904865 TGGAGATGCTCTTCGGTGGT 60.905 55.000 0.00 0.00 0.00 4.16
537 538 0.250234 TTGGAGATGCTCTTCGGTGG 59.750 55.000 0.00 0.00 0.00 4.61
538 539 1.338105 TGTTGGAGATGCTCTTCGGTG 60.338 52.381 0.00 0.00 0.00 4.94
539 540 0.976641 TGTTGGAGATGCTCTTCGGT 59.023 50.000 0.00 0.00 0.00 4.69
540 541 1.649664 CTGTTGGAGATGCTCTTCGG 58.350 55.000 0.00 0.00 0.00 4.30
541 542 1.005340 GCTGTTGGAGATGCTCTTCG 58.995 55.000 0.00 0.00 0.00 3.79
542 543 2.008329 CTGCTGTTGGAGATGCTCTTC 58.992 52.381 0.00 0.00 33.10 2.87
543 544 1.949547 GCTGCTGTTGGAGATGCTCTT 60.950 52.381 0.00 0.00 33.10 2.85
544 545 0.392729 GCTGCTGTTGGAGATGCTCT 60.393 55.000 0.00 0.00 33.10 4.09
545 546 1.375098 GGCTGCTGTTGGAGATGCTC 61.375 60.000 0.00 0.00 33.10 4.26
546 547 1.378250 GGCTGCTGTTGGAGATGCT 60.378 57.895 0.00 0.00 33.10 3.79
547 548 2.413142 GGGCTGCTGTTGGAGATGC 61.413 63.158 0.00 0.00 33.10 3.91
548 549 0.543277 TAGGGCTGCTGTTGGAGATG 59.457 55.000 0.00 0.00 33.10 2.90
549 550 1.516110 ATAGGGCTGCTGTTGGAGAT 58.484 50.000 0.00 0.00 33.10 2.75
550 551 2.174685 TATAGGGCTGCTGTTGGAGA 57.825 50.000 0.00 0.00 33.10 3.71
551 552 3.281727 TTTATAGGGCTGCTGTTGGAG 57.718 47.619 0.00 0.00 34.56 3.86
552 553 3.951563 ATTTATAGGGCTGCTGTTGGA 57.048 42.857 0.00 0.00 0.00 3.53
553 554 7.665559 TCTTATAATTTATAGGGCTGCTGTTGG 59.334 37.037 0.00 0.00 0.00 3.77
554 555 8.621532 TCTTATAATTTATAGGGCTGCTGTTG 57.378 34.615 0.00 0.00 0.00 3.33
555 556 9.289782 CTTCTTATAATTTATAGGGCTGCTGTT 57.710 33.333 0.00 0.00 0.00 3.16
556 557 7.885399 CCTTCTTATAATTTATAGGGCTGCTGT 59.115 37.037 0.00 0.00 0.00 4.40
557 558 7.885399 ACCTTCTTATAATTTATAGGGCTGCTG 59.115 37.037 0.00 0.00 0.00 4.41
558 559 7.990055 ACCTTCTTATAATTTATAGGGCTGCT 58.010 34.615 0.00 0.00 0.00 4.24
559 560 9.907229 ATACCTTCTTATAATTTATAGGGCTGC 57.093 33.333 5.90 0.00 0.00 5.25
574 575 9.553064 CATCTTGTGCTCTAAATACCTTCTTAT 57.447 33.333 0.00 0.00 0.00 1.73
575 576 7.987458 CCATCTTGTGCTCTAAATACCTTCTTA 59.013 37.037 0.00 0.00 0.00 2.10
576 577 6.825721 CCATCTTGTGCTCTAAATACCTTCTT 59.174 38.462 0.00 0.00 0.00 2.52
577 578 6.352516 CCATCTTGTGCTCTAAATACCTTCT 58.647 40.000 0.00 0.00 0.00 2.85
578 579 5.008118 GCCATCTTGTGCTCTAAATACCTTC 59.992 44.000 0.00 0.00 0.00 3.46
579 580 4.884164 GCCATCTTGTGCTCTAAATACCTT 59.116 41.667 0.00 0.00 0.00 3.50
580 581 4.080356 TGCCATCTTGTGCTCTAAATACCT 60.080 41.667 0.00 0.00 0.00 3.08
581 582 4.199310 TGCCATCTTGTGCTCTAAATACC 58.801 43.478 0.00 0.00 0.00 2.73
582 583 5.818136 TTGCCATCTTGTGCTCTAAATAC 57.182 39.130 0.00 0.00 0.00 1.89
583 584 6.832520 TTTTGCCATCTTGTGCTCTAAATA 57.167 33.333 0.00 0.00 0.00 1.40
584 585 5.726980 TTTTGCCATCTTGTGCTCTAAAT 57.273 34.783 0.00 0.00 0.00 1.40
585 586 5.528043 TTTTTGCCATCTTGTGCTCTAAA 57.472 34.783 0.00 0.00 0.00 1.85
604 605 4.407296 TGGCAACTATTTGAGGGTGTTTTT 59.593 37.500 0.00 0.00 34.24 1.94
605 606 3.964031 TGGCAACTATTTGAGGGTGTTTT 59.036 39.130 0.00 0.00 34.24 2.43
606 607 3.571590 TGGCAACTATTTGAGGGTGTTT 58.428 40.909 0.00 0.00 34.24 2.83
607 608 3.237268 TGGCAACTATTTGAGGGTGTT 57.763 42.857 0.00 0.00 34.24 3.32
608 609 2.969821 TGGCAACTATTTGAGGGTGT 57.030 45.000 0.00 0.00 34.24 4.16
609 610 4.381932 GGAATTGGCAACTATTTGAGGGTG 60.382 45.833 0.00 0.00 42.20 4.61
610 611 3.769300 GGAATTGGCAACTATTTGAGGGT 59.231 43.478 0.00 0.00 42.20 4.34
611 612 4.026052 AGGAATTGGCAACTATTTGAGGG 58.974 43.478 0.00 0.00 42.20 4.30
612 613 6.152661 TGTTAGGAATTGGCAACTATTTGAGG 59.847 38.462 0.00 0.00 42.20 3.86
613 614 7.094205 ACTGTTAGGAATTGGCAACTATTTGAG 60.094 37.037 0.00 0.00 42.20 3.02
614 615 6.719370 ACTGTTAGGAATTGGCAACTATTTGA 59.281 34.615 0.00 0.00 42.20 2.69
615 616 6.924111 ACTGTTAGGAATTGGCAACTATTTG 58.076 36.000 0.00 0.00 42.20 2.32
616 617 6.948309 AGACTGTTAGGAATTGGCAACTATTT 59.052 34.615 0.00 0.00 42.20 1.40
617 618 6.485171 AGACTGTTAGGAATTGGCAACTATT 58.515 36.000 0.00 0.00 44.87 1.73
618 619 6.067217 AGACTGTTAGGAATTGGCAACTAT 57.933 37.500 0.00 0.00 37.61 2.12
619 620 5.499004 AGACTGTTAGGAATTGGCAACTA 57.501 39.130 0.00 0.00 37.61 2.24
620 621 4.373156 AGACTGTTAGGAATTGGCAACT 57.627 40.909 0.00 0.00 37.61 3.16
621 622 4.798574 CAAGACTGTTAGGAATTGGCAAC 58.201 43.478 0.00 0.00 0.00 4.17
622 623 3.255642 GCAAGACTGTTAGGAATTGGCAA 59.744 43.478 0.68 0.68 0.00 4.52
623 624 2.819608 GCAAGACTGTTAGGAATTGGCA 59.180 45.455 0.00 0.00 0.00 4.92
624 625 2.819608 TGCAAGACTGTTAGGAATTGGC 59.180 45.455 0.00 0.00 0.00 4.52
625 626 5.452078 TTTGCAAGACTGTTAGGAATTGG 57.548 39.130 0.00 0.00 0.00 3.16
676 677 3.374988 ACACATATTTGATGCACGAGGTG 59.625 43.478 0.00 0.00 36.51 4.00
677 678 3.609853 ACACATATTTGATGCACGAGGT 58.390 40.909 0.00 0.00 0.00 3.85
678 679 3.622612 TGACACATATTTGATGCACGAGG 59.377 43.478 0.00 0.00 0.00 4.63
679 680 4.260497 CCTGACACATATTTGATGCACGAG 60.260 45.833 0.00 0.00 0.00 4.18
680 681 3.622612 CCTGACACATATTTGATGCACGA 59.377 43.478 0.00 0.00 0.00 4.35
681 682 3.789791 GCCTGACACATATTTGATGCACG 60.790 47.826 0.00 0.00 0.00 5.34
682 683 3.129113 TGCCTGACACATATTTGATGCAC 59.871 43.478 0.00 0.00 0.00 4.57
683 684 3.354467 TGCCTGACACATATTTGATGCA 58.646 40.909 0.00 0.00 0.00 3.96
684 685 4.107622 GTTGCCTGACACATATTTGATGC 58.892 43.478 0.00 0.00 0.00 3.91
685 686 4.675510 GGTTGCCTGACACATATTTGATG 58.324 43.478 0.00 0.00 0.00 3.07
686 687 3.378112 CGGTTGCCTGACACATATTTGAT 59.622 43.478 0.00 0.00 0.00 2.57
687 688 2.746904 CGGTTGCCTGACACATATTTGA 59.253 45.455 0.00 0.00 0.00 2.69
688 689 2.159393 CCGGTTGCCTGACACATATTTG 60.159 50.000 0.00 0.00 0.00 2.32
689 690 2.091541 CCGGTTGCCTGACACATATTT 58.908 47.619 0.00 0.00 0.00 1.40
690 691 1.750193 CCGGTTGCCTGACACATATT 58.250 50.000 0.00 0.00 0.00 1.28
691 692 0.748005 GCCGGTTGCCTGACACATAT 60.748 55.000 1.90 0.00 0.00 1.78
692 693 1.376683 GCCGGTTGCCTGACACATA 60.377 57.895 1.90 0.00 0.00 2.29
693 694 2.672996 GCCGGTTGCCTGACACAT 60.673 61.111 1.90 0.00 0.00 3.21
694 695 3.872603 AGCCGGTTGCCTGACACA 61.873 61.111 1.90 0.00 42.71 3.72
695 696 3.357079 CAGCCGGTTGCCTGACAC 61.357 66.667 4.99 0.00 42.71 3.67
708 709 0.027455 GTTTTTGTTTTGCGGCAGCC 59.973 50.000 6.32 0.00 44.33 4.85
709 710 0.314979 CGTTTTTGTTTTGCGGCAGC 60.315 50.000 1.67 0.31 45.41 5.25
710 711 0.300193 CCGTTTTTGTTTTGCGGCAG 59.700 50.000 1.67 0.00 35.90 4.85
711 712 2.373938 CCGTTTTTGTTTTGCGGCA 58.626 47.368 0.00 0.00 35.90 5.69
713 714 0.300193 CTGCCGTTTTTGTTTTGCGG 59.700 50.000 0.00 0.00 44.60 5.69
714 715 0.314979 GCTGCCGTTTTTGTTTTGCG 60.315 50.000 0.00 0.00 0.00 4.85
715 716 0.027455 GGCTGCCGTTTTTGTTTTGC 59.973 50.000 1.35 0.00 0.00 3.68
716 717 0.655208 GGGCTGCCGTTTTTGTTTTG 59.345 50.000 13.40 0.00 0.00 2.44
717 718 0.250513 TGGGCTGCCGTTTTTGTTTT 59.749 45.000 13.40 0.00 0.00 2.43
718 719 0.461163 GTGGGCTGCCGTTTTTGTTT 60.461 50.000 13.40 0.00 0.00 2.83
719 720 1.142965 GTGGGCTGCCGTTTTTGTT 59.857 52.632 13.40 0.00 0.00 2.83
720 721 2.791868 GGTGGGCTGCCGTTTTTGT 61.792 57.895 13.40 0.00 0.00 2.83
721 722 2.028925 GGTGGGCTGCCGTTTTTG 59.971 61.111 13.40 0.00 0.00 2.44
722 723 3.230990 GGGTGGGCTGCCGTTTTT 61.231 61.111 13.40 0.00 0.00 1.94
723 724 4.531426 TGGGTGGGCTGCCGTTTT 62.531 61.111 13.40 0.00 0.00 2.43
744 745 4.090057 GGTTGAGCGAGCGGTTGC 62.090 66.667 19.20 19.20 43.24 4.17
745 746 2.664851 TGGTTGAGCGAGCGGTTG 60.665 61.111 0.00 0.00 0.00 3.77
746 747 2.665185 GTGGTTGAGCGAGCGGTT 60.665 61.111 0.00 0.00 0.00 4.44
747 748 4.681978 GGTGGTTGAGCGAGCGGT 62.682 66.667 0.00 0.00 0.00 5.68
751 752 4.680237 TGCGGGTGGTTGAGCGAG 62.680 66.667 0.00 0.00 0.00 5.03
752 753 4.243008 TTGCGGGTGGTTGAGCGA 62.243 61.111 0.00 0.00 0.00 4.93
753 754 4.025401 GTTGCGGGTGGTTGAGCG 62.025 66.667 0.00 0.00 0.00 5.03
754 755 3.670377 GGTTGCGGGTGGTTGAGC 61.670 66.667 0.00 0.00 0.00 4.26
755 756 2.203280 TGGTTGCGGGTGGTTGAG 60.203 61.111 0.00 0.00 0.00 3.02
756 757 2.517402 GTGGTTGCGGGTGGTTGA 60.517 61.111 0.00 0.00 0.00 3.18
757 758 2.830827 TGTGGTTGCGGGTGGTTG 60.831 61.111 0.00 0.00 0.00 3.77
758 759 2.831284 GTGTGGTTGCGGGTGGTT 60.831 61.111 0.00 0.00 0.00 3.67
759 760 3.767630 GAGTGTGGTTGCGGGTGGT 62.768 63.158 0.00 0.00 0.00 4.16
760 761 2.978010 GAGTGTGGTTGCGGGTGG 60.978 66.667 0.00 0.00 0.00 4.61
761 762 2.978010 GGAGTGTGGTTGCGGGTG 60.978 66.667 0.00 0.00 0.00 4.61
762 763 3.168528 AGGAGTGTGGTTGCGGGT 61.169 61.111 0.00 0.00 0.00 5.28
763 764 2.358737 GAGGAGTGTGGTTGCGGG 60.359 66.667 0.00 0.00 0.00 6.13
764 765 2.358737 GGAGGAGTGTGGTTGCGG 60.359 66.667 0.00 0.00 0.00 5.69
765 766 2.358737 GGGAGGAGTGTGGTTGCG 60.359 66.667 0.00 0.00 0.00 4.85
766 767 2.034221 GGGGAGGAGTGTGGTTGC 59.966 66.667 0.00 0.00 0.00 4.17
767 768 1.679898 GAGGGGAGGAGTGTGGTTG 59.320 63.158 0.00 0.00 0.00 3.77
768 769 1.539124 GGAGGGGAGGAGTGTGGTT 60.539 63.158 0.00 0.00 0.00 3.67
769 770 2.122954 GGAGGGGAGGAGTGTGGT 59.877 66.667 0.00 0.00 0.00 4.16
770 771 2.122729 TGGAGGGGAGGAGTGTGG 59.877 66.667 0.00 0.00 0.00 4.17
771 772 2.294078 GGTGGAGGGGAGGAGTGTG 61.294 68.421 0.00 0.00 0.00 3.82
772 773 2.122954 GGTGGAGGGGAGGAGTGT 59.877 66.667 0.00 0.00 0.00 3.55
773 774 3.077556 CGGTGGAGGGGAGGAGTG 61.078 72.222 0.00 0.00 0.00 3.51
774 775 4.400251 CCGGTGGAGGGGAGGAGT 62.400 72.222 0.00 0.00 0.00 3.85
775 776 4.400251 ACCGGTGGAGGGGAGGAG 62.400 72.222 6.12 0.00 35.02 3.69
776 777 4.715130 CACCGGTGGAGGGGAGGA 62.715 72.222 27.57 0.00 36.61 3.71
778 779 3.391382 GACACCGGTGGAGGGGAG 61.391 72.222 36.47 11.22 38.30 4.30
779 780 4.242586 TGACACCGGTGGAGGGGA 62.243 66.667 36.47 11.93 38.30 4.81
780 781 3.706373 CTGACACCGGTGGAGGGG 61.706 72.222 36.47 18.08 41.48 4.79
781 782 1.961180 GATCTGACACCGGTGGAGGG 61.961 65.000 36.47 22.55 35.02 4.30
782 783 0.972983 AGATCTGACACCGGTGGAGG 60.973 60.000 36.47 24.21 34.19 4.30
783 784 0.174389 CAGATCTGACACCGGTGGAG 59.826 60.000 36.47 29.30 34.19 3.86
784 785 0.541998 ACAGATCTGACACCGGTGGA 60.542 55.000 36.47 24.70 34.19 4.02
785 786 0.390340 CACAGATCTGACACCGGTGG 60.390 60.000 36.47 20.25 34.19 4.61
786 787 0.390340 CCACAGATCTGACACCGGTG 60.390 60.000 32.83 32.83 0.00 4.94
787 788 1.975327 CCACAGATCTGACACCGGT 59.025 57.895 29.27 0.00 0.00 5.28
788 789 1.448540 GCCACAGATCTGACACCGG 60.449 63.158 29.27 19.15 0.00 5.28
789 790 0.817654 TAGCCACAGATCTGACACCG 59.182 55.000 29.27 11.42 0.00 4.94
790 791 1.134670 GGTAGCCACAGATCTGACACC 60.135 57.143 29.27 20.58 0.00 4.16
791 792 1.469940 CGGTAGCCACAGATCTGACAC 60.470 57.143 29.27 16.09 0.00 3.67
792 793 0.817654 CGGTAGCCACAGATCTGACA 59.182 55.000 29.27 6.11 0.00 3.58
793 794 0.528684 GCGGTAGCCACAGATCTGAC 60.529 60.000 29.27 15.51 37.42 3.51
794 795 0.970427 TGCGGTAGCCACAGATCTGA 60.970 55.000 29.27 3.06 44.33 3.27
795 796 0.807667 GTGCGGTAGCCACAGATCTG 60.808 60.000 21.37 21.37 44.33 2.90
796 797 1.517832 GTGCGGTAGCCACAGATCT 59.482 57.895 8.18 0.00 44.33 2.75
797 798 1.521681 GGTGCGGTAGCCACAGATC 60.522 63.158 13.23 0.00 44.33 2.75
798 799 2.584608 GGTGCGGTAGCCACAGAT 59.415 61.111 13.23 0.00 44.33 2.90
799 800 3.702048 GGGTGCGGTAGCCACAGA 61.702 66.667 9.54 0.00 46.44 3.41
805 806 4.886121 GTAGGCGGGTGCGGTAGC 62.886 72.222 0.00 0.00 44.10 3.58
806 807 4.564116 CGTAGGCGGGTGCGGTAG 62.564 72.222 0.00 0.00 44.10 3.18
819 820 1.436983 GGAAGCAAATCGGGCCGTAG 61.437 60.000 27.32 14.81 0.00 3.51
820 821 1.450669 GGAAGCAAATCGGGCCGTA 60.451 57.895 27.32 13.31 0.00 4.02
821 822 2.750237 GGAAGCAAATCGGGCCGT 60.750 61.111 27.32 10.72 0.00 5.68
822 823 3.518068 GGGAAGCAAATCGGGCCG 61.518 66.667 22.51 22.51 0.00 6.13
823 824 3.147595 GGGGAAGCAAATCGGGCC 61.148 66.667 0.00 0.00 0.00 5.80
824 825 3.518068 CGGGGAAGCAAATCGGGC 61.518 66.667 0.00 0.00 0.00 6.13
825 826 3.518068 GCGGGGAAGCAAATCGGG 61.518 66.667 0.00 0.00 37.05 5.14
826 827 3.518068 GGCGGGGAAGCAAATCGG 61.518 66.667 0.00 0.00 39.27 4.18
827 828 3.876198 CGGCGGGGAAGCAAATCG 61.876 66.667 0.00 0.00 39.27 3.34
828 829 4.193334 GCGGCGGGGAAGCAAATC 62.193 66.667 9.78 0.00 39.27 2.17
849 850 4.077184 TTAGACCGGCGGCTGTGG 62.077 66.667 28.71 5.18 0.00 4.17
850 851 2.509336 CTTAGACCGGCGGCTGTG 60.509 66.667 28.71 15.92 0.00 3.66
851 852 3.771160 CCTTAGACCGGCGGCTGT 61.771 66.667 28.71 13.50 0.00 4.40
852 853 2.311688 ATTCCTTAGACCGGCGGCTG 62.312 60.000 28.71 12.59 0.00 4.85
853 854 2.029307 GATTCCTTAGACCGGCGGCT 62.029 60.000 28.71 25.04 0.00 5.52
854 855 1.594564 GATTCCTTAGACCGGCGGC 60.595 63.158 28.71 19.04 0.00 6.53
855 856 0.529992 GTGATTCCTTAGACCGGCGG 60.530 60.000 27.06 27.06 0.00 6.13
856 857 0.174845 TGTGATTCCTTAGACCGGCG 59.825 55.000 0.00 0.00 0.00 6.46
857 858 1.653151 GTGTGATTCCTTAGACCGGC 58.347 55.000 0.00 0.00 0.00 6.13
858 859 1.553248 TGGTGTGATTCCTTAGACCGG 59.447 52.381 0.00 0.00 0.00 5.28
859 860 2.618053 GTGGTGTGATTCCTTAGACCG 58.382 52.381 0.00 0.00 0.00 4.79
860 861 2.677037 CGGTGGTGTGATTCCTTAGACC 60.677 54.545 0.00 0.00 0.00 3.85
861 862 2.618053 CGGTGGTGTGATTCCTTAGAC 58.382 52.381 0.00 0.00 0.00 2.59
883 884 2.075426 GATTGGGCAGCAATACGGGC 62.075 60.000 0.00 0.00 38.35 6.13
884 885 1.455383 GGATTGGGCAGCAATACGGG 61.455 60.000 0.00 0.00 0.00 5.28
886 887 1.455383 GGGGATTGGGCAGCAATACG 61.455 60.000 0.00 0.00 0.00 3.06
911 912 2.031465 TGGAAAAGCGTCGGGGTC 59.969 61.111 0.00 0.00 0.00 4.46
973 974 3.080121 CTGGAGAGGAAGCGGCCT 61.080 66.667 0.00 0.00 42.17 5.19
1073 1074 3.705934 TTGCCGGTGTGCTGGAACA 62.706 57.895 1.90 0.00 43.97 3.18
1084 1085 1.677633 GCCAATACTGGTTGCCGGT 60.678 57.895 1.90 4.92 45.53 5.28
1094 1095 3.326747 GTGAAAGTGTCGAGCCAATACT 58.673 45.455 0.00 0.00 0.00 2.12
1110 1111 1.478510 ACAATGTTGGCCAACGTGAAA 59.521 42.857 38.71 26.41 43.94 2.69
1166 1167 3.382803 CTGAGCTTCGAGCAGGGGG 62.383 68.421 9.09 0.00 45.56 5.40
1193 1200 2.438434 CATCCGCCCAAGTCCCAC 60.438 66.667 0.00 0.00 0.00 4.61
1213 1220 3.073378 TGGCGGACCAATGTGCTA 58.927 55.556 0.00 0.00 45.37 3.49
1221 1228 0.888736 CAATTGTCACTGGCGGACCA 60.889 55.000 0.00 0.00 46.51 4.02
1224 1231 1.303236 CCCAATTGTCACTGGCGGA 60.303 57.895 0.00 0.00 0.00 5.54
1259 1269 7.275183 TCACTCATCGATAACAATTTGAGGAT 58.725 34.615 11.80 0.00 35.93 3.24
1266 1280 8.322906 TGTTTTCTCACTCATCGATAACAATT 57.677 30.769 0.00 0.00 29.84 2.32
1278 1292 6.875726 CACTCTTATGGATGTTTTCTCACTCA 59.124 38.462 0.00 0.00 0.00 3.41
1287 1301 6.070021 TGACCTCATCACTCTTATGGATGTTT 60.070 38.462 0.00 0.00 39.47 2.83
1356 1370 3.333980 TCTTCCAGTAGACTTCCCTCTCA 59.666 47.826 0.00 0.00 0.00 3.27
1366 1380 2.417515 CGGCCTTCTTCTTCCAGTAGAC 60.418 54.545 0.00 0.00 0.00 2.59
1376 1393 0.036858 GCACTTCTCGGCCTTCTTCT 60.037 55.000 0.00 0.00 0.00 2.85
1393 1413 1.338960 TGCCTCATCGTCATTCTTGCA 60.339 47.619 0.00 0.00 0.00 4.08
1422 1442 4.997565 TCCTTTTCTTGCTTTGTGACAAG 58.002 39.130 0.00 0.00 43.73 3.16
1424 1444 4.704540 TCTTCCTTTTCTTGCTTTGTGACA 59.295 37.500 0.00 0.00 0.00 3.58
1440 1460 1.918957 CCACCTCCTCCATTCTTCCTT 59.081 52.381 0.00 0.00 0.00 3.36
1442 1462 0.106967 GCCACCTCCTCCATTCTTCC 60.107 60.000 0.00 0.00 0.00 3.46
1458 1478 1.992538 TGATGTTGACCACATTGCCA 58.007 45.000 0.00 0.00 46.96 4.92
1478 1510 2.378084 CGTCGGACTCGTCACTCGA 61.378 63.158 6.57 0.00 46.83 4.04
1479 1511 2.096030 CGTCGGACTCGTCACTCG 59.904 66.667 6.57 0.00 41.41 4.18
1486 1518 2.158959 GTCAATGCCGTCGGACTCG 61.159 63.158 17.49 0.00 37.82 4.18
1501 1533 1.344065 ACTACACATTGTCCCGGTCA 58.656 50.000 0.00 0.00 0.00 4.02
1505 1537 5.934935 ACTTTAAACTACACATTGTCCCG 57.065 39.130 0.00 0.00 0.00 5.14
1514 1546 9.755804 ACTTAGACTACCAACTTTAAACTACAC 57.244 33.333 0.00 0.00 0.00 2.90
1611 1660 6.985188 TGAACTACTTCAGCCATATTTCAC 57.015 37.500 0.00 0.00 32.33 3.18
1622 1671 9.869844 CTGAACTAAACATTTGAACTACTTCAG 57.130 33.333 0.00 0.00 37.70 3.02
1648 1697 9.101655 CCCAGATCAACCAAATCATTTTATTTC 57.898 33.333 0.00 0.00 0.00 2.17
1652 1701 6.574073 GCACCCAGATCAACCAAATCATTTTA 60.574 38.462 0.00 0.00 0.00 1.52
1751 1800 9.767684 TCAAGCGACATACATTTAGTTATTTTG 57.232 29.630 0.00 0.00 0.00 2.44
1768 1819 6.119536 ACCCAAATTCTATATTCAAGCGACA 58.880 36.000 0.00 0.00 0.00 4.35
1792 1843 4.893608 TCCTTCACATGAAAATCGACTGA 58.106 39.130 0.00 0.00 33.07 3.41
1798 1849 4.766891 TGGTCCTTCCTTCACATGAAAATC 59.233 41.667 0.00 0.00 37.07 2.17
1806 1857 1.059584 TGGCTGGTCCTTCCTTCACA 61.060 55.000 0.00 0.00 37.07 3.58
1819 1870 0.979665 TCTTCCTTCACTCTGGCTGG 59.020 55.000 0.00 0.00 0.00 4.85
1820 1871 2.697654 CTTCTTCCTTCACTCTGGCTG 58.302 52.381 0.00 0.00 0.00 4.85
1844 1895 1.234529 CTCCTTCCCTCCCTCCGAT 59.765 63.158 0.00 0.00 0.00 4.18
1845 1896 2.690452 CTCCTTCCCTCCCTCCGA 59.310 66.667 0.00 0.00 0.00 4.55
1925 1977 0.324275 ATATTGCACCACCCCCACAC 60.324 55.000 0.00 0.00 0.00 3.82
1926 1978 0.033601 GATATTGCACCACCCCCACA 60.034 55.000 0.00 0.00 0.00 4.17
1927 1979 1.101049 CGATATTGCACCACCCCCAC 61.101 60.000 0.00 0.00 0.00 4.61
1928 1980 1.225983 CGATATTGCACCACCCCCA 59.774 57.895 0.00 0.00 0.00 4.96
1929 1981 1.528309 CCGATATTGCACCACCCCC 60.528 63.158 0.00 0.00 0.00 5.40
1962 2015 2.122369 CCTCTAGCCCCGGGGATT 60.122 66.667 44.86 30.92 37.50 3.01
1966 2019 2.925170 CATCCCTCTAGCCCCGGG 60.925 72.222 15.80 15.80 39.41 5.73
1994 2050 3.041940 CTCCCACCGTCGTGTTGC 61.042 66.667 0.00 0.00 38.41 4.17
1997 2053 2.989824 CTCCTCCCACCGTCGTGT 60.990 66.667 0.00 0.00 38.41 4.49
2001 2057 1.889530 CTCAACCTCCTCCCACCGTC 61.890 65.000 0.00 0.00 0.00 4.79
2003 2059 2.660064 CCTCAACCTCCTCCCACCG 61.660 68.421 0.00 0.00 0.00 4.94
2041 2097 6.788684 TGTTTTTGATCATGCCAAAATCTG 57.211 33.333 19.36 0.00 41.39 2.90
2042 2098 9.675464 ATTATGTTTTTGATCATGCCAAAATCT 57.325 25.926 19.36 12.71 41.39 2.40
2052 2108 9.822185 GGCCTTCTTAATTATGTTTTTGATCAT 57.178 29.630 0.00 0.00 0.00 2.45
2053 2109 9.034800 AGGCCTTCTTAATTATGTTTTTGATCA 57.965 29.630 0.00 0.00 0.00 2.92
2054 2110 9.521503 GAGGCCTTCTTAATTATGTTTTTGATC 57.478 33.333 6.77 0.00 0.00 2.92
2055 2111 9.034800 TGAGGCCTTCTTAATTATGTTTTTGAT 57.965 29.630 6.77 0.00 0.00 2.57
2056 2112 8.415950 TGAGGCCTTCTTAATTATGTTTTTGA 57.584 30.769 6.77 0.00 0.00 2.69
2057 2113 9.487790 TTTGAGGCCTTCTTAATTATGTTTTTG 57.512 29.630 6.77 0.00 0.00 2.44
2059 2115 9.657419 CATTTGAGGCCTTCTTAATTATGTTTT 57.343 29.630 6.77 0.00 0.00 2.43
2060 2116 8.260114 CCATTTGAGGCCTTCTTAATTATGTTT 58.740 33.333 6.77 0.00 0.00 2.83
2061 2117 7.619302 TCCATTTGAGGCCTTCTTAATTATGTT 59.381 33.333 6.77 0.00 0.00 2.71
2062 2118 7.125391 TCCATTTGAGGCCTTCTTAATTATGT 58.875 34.615 6.77 0.00 0.00 2.29
2063 2119 7.587037 TCCATTTGAGGCCTTCTTAATTATG 57.413 36.000 6.77 2.88 0.00 1.90
2064 2120 8.608185 TTTCCATTTGAGGCCTTCTTAATTAT 57.392 30.769 6.77 0.00 0.00 1.28
2065 2121 8.429237 TTTTCCATTTGAGGCCTTCTTAATTA 57.571 30.769 6.77 0.00 0.00 1.40
2066 2122 6.933514 TTTCCATTTGAGGCCTTCTTAATT 57.066 33.333 6.77 0.00 0.00 1.40
2067 2123 6.498303 ACTTTTCCATTTGAGGCCTTCTTAAT 59.502 34.615 6.77 1.54 0.00 1.40
2068 2124 5.838521 ACTTTTCCATTTGAGGCCTTCTTAA 59.161 36.000 6.77 0.00 0.00 1.85
2069 2125 5.393866 ACTTTTCCATTTGAGGCCTTCTTA 58.606 37.500 6.77 0.00 0.00 2.10
2070 2126 4.226384 ACTTTTCCATTTGAGGCCTTCTT 58.774 39.130 6.77 0.00 0.00 2.52
2071 2127 3.849527 ACTTTTCCATTTGAGGCCTTCT 58.150 40.909 6.77 0.00 0.00 2.85
2072 2128 4.767409 AGTACTTTTCCATTTGAGGCCTTC 59.233 41.667 6.77 0.10 0.00 3.46
2073 2129 4.740902 AGTACTTTTCCATTTGAGGCCTT 58.259 39.130 6.77 0.00 0.00 4.35
2074 2130 4.202567 TGAGTACTTTTCCATTTGAGGCCT 60.203 41.667 3.86 3.86 0.00 5.19
2075 2131 4.079253 TGAGTACTTTTCCATTTGAGGCC 58.921 43.478 0.00 0.00 0.00 5.19
2076 2132 5.705609 TTGAGTACTTTTCCATTTGAGGC 57.294 39.130 0.00 0.00 0.00 4.70
2077 2133 6.152379 GCTTTGAGTACTTTTCCATTTGAGG 58.848 40.000 0.00 0.00 0.00 3.86
2078 2134 5.853282 CGCTTTGAGTACTTTTCCATTTGAG 59.147 40.000 0.00 0.00 0.00 3.02
2079 2135 5.529430 TCGCTTTGAGTACTTTTCCATTTGA 59.471 36.000 0.00 0.00 0.00 2.69
2080 2136 5.757886 TCGCTTTGAGTACTTTTCCATTTG 58.242 37.500 0.00 0.00 0.00 2.32
2081 2137 5.763204 TCTCGCTTTGAGTACTTTTCCATTT 59.237 36.000 0.00 0.00 45.46 2.32
2082 2138 5.305585 TCTCGCTTTGAGTACTTTTCCATT 58.694 37.500 0.00 0.00 45.46 3.16
2083 2139 4.894784 TCTCGCTTTGAGTACTTTTCCAT 58.105 39.130 0.00 0.00 45.46 3.41
2084 2140 4.330944 TCTCGCTTTGAGTACTTTTCCA 57.669 40.909 0.00 0.00 45.46 3.53
2085 2141 5.236695 ACTTTCTCGCTTTGAGTACTTTTCC 59.763 40.000 0.00 0.00 45.46 3.13
2086 2142 6.288426 ACTTTCTCGCTTTGAGTACTTTTC 57.712 37.500 0.00 0.00 45.46 2.29
2087 2143 6.679327 AACTTTCTCGCTTTGAGTACTTTT 57.321 33.333 0.00 0.00 45.46 2.27
2088 2144 6.679327 AAACTTTCTCGCTTTGAGTACTTT 57.321 33.333 0.00 0.00 45.46 2.66
2089 2145 6.093633 ACAAAACTTTCTCGCTTTGAGTACTT 59.906 34.615 0.00 0.00 45.46 2.24
2090 2146 5.585047 ACAAAACTTTCTCGCTTTGAGTACT 59.415 36.000 0.00 0.00 45.46 2.73
2091 2147 5.807344 ACAAAACTTTCTCGCTTTGAGTAC 58.193 37.500 0.73 0.00 45.46 2.73
2092 2148 7.358931 CGATACAAAACTTTCTCGCTTTGAGTA 60.359 37.037 0.73 0.00 45.46 2.59
2093 2149 4.965119 ACAAAACTTTCTCGCTTTGAGT 57.035 36.364 0.73 0.00 45.46 3.41
2094 2150 5.785599 CGATACAAAACTTTCTCGCTTTGAG 59.214 40.000 0.73 0.00 46.72 3.02
2095 2151 5.235616 ACGATACAAAACTTTCTCGCTTTGA 59.764 36.000 0.00 0.00 33.84 2.69
2096 2152 5.440685 ACGATACAAAACTTTCTCGCTTTG 58.559 37.500 0.00 0.00 35.39 2.77
2097 2153 5.235616 TGACGATACAAAACTTTCTCGCTTT 59.764 36.000 0.00 0.00 0.00 3.51
2098 2154 4.748102 TGACGATACAAAACTTTCTCGCTT 59.252 37.500 0.00 0.00 0.00 4.68
2099 2155 4.304110 TGACGATACAAAACTTTCTCGCT 58.696 39.130 0.00 0.00 0.00 4.93
2100 2156 4.640805 TGACGATACAAAACTTTCTCGC 57.359 40.909 0.00 0.00 0.00 5.03
2101 2157 6.573725 CCTTTTGACGATACAAAACTTTCTCG 59.426 38.462 12.68 0.00 42.33 4.04
2102 2158 7.636326 TCCTTTTGACGATACAAAACTTTCTC 58.364 34.615 12.68 0.00 42.33 2.87
2103 2159 7.497909 TCTCCTTTTGACGATACAAAACTTTCT 59.502 33.333 12.68 0.00 42.33 2.52
2104 2160 7.636326 TCTCCTTTTGACGATACAAAACTTTC 58.364 34.615 12.68 0.00 42.33 2.62
2105 2161 7.562454 TCTCCTTTTGACGATACAAAACTTT 57.438 32.000 12.68 0.00 42.33 2.66
2106 2162 7.562454 TTCTCCTTTTGACGATACAAAACTT 57.438 32.000 12.68 0.00 42.33 2.66
2107 2163 7.282450 AGTTTCTCCTTTTGACGATACAAAACT 59.718 33.333 12.68 0.00 42.33 2.66
2108 2164 7.415229 AGTTTCTCCTTTTGACGATACAAAAC 58.585 34.615 12.68 0.00 42.33 2.43
2109 2165 7.562454 AGTTTCTCCTTTTGACGATACAAAA 57.438 32.000 14.68 14.68 44.08 2.44
2110 2166 7.562454 AAGTTTCTCCTTTTGACGATACAAA 57.438 32.000 0.00 0.00 37.87 2.83
2111 2167 7.281324 TCAAAGTTTCTCCTTTTGACGATACAA 59.719 33.333 0.00 0.00 36.28 2.41
2112 2168 6.764085 TCAAAGTTTCTCCTTTTGACGATACA 59.236 34.615 0.00 0.00 36.28 2.29
2113 2169 7.186021 TCAAAGTTTCTCCTTTTGACGATAC 57.814 36.000 0.00 0.00 36.28 2.24
2114 2170 7.979444 ATCAAAGTTTCTCCTTTTGACGATA 57.021 32.000 0.00 0.00 41.85 2.92
2115 2171 6.884280 ATCAAAGTTTCTCCTTTTGACGAT 57.116 33.333 0.00 0.00 41.85 3.73
2116 2172 7.979444 ATATCAAAGTTTCTCCTTTTGACGA 57.021 32.000 0.00 0.00 41.85 4.20
2117 2173 8.905702 CAAATATCAAAGTTTCTCCTTTTGACG 58.094 33.333 1.47 0.00 41.85 4.35
2118 2174 9.196552 CCAAATATCAAAGTTTCTCCTTTTGAC 57.803 33.333 1.47 0.00 41.85 3.18
2119 2175 8.367156 CCCAAATATCAAAGTTTCTCCTTTTGA 58.633 33.333 1.90 1.90 42.83 2.69
2120 2176 7.118245 GCCCAAATATCAAAGTTTCTCCTTTTG 59.882 37.037 0.00 0.00 32.42 2.44
2121 2177 7.161404 GCCCAAATATCAAAGTTTCTCCTTTT 58.839 34.615 0.00 0.00 32.42 2.27
2122 2178 6.295859 GGCCCAAATATCAAAGTTTCTCCTTT 60.296 38.462 0.00 0.00 35.06 3.11
2123 2179 5.187772 GGCCCAAATATCAAAGTTTCTCCTT 59.812 40.000 0.00 0.00 0.00 3.36
2124 2180 4.711846 GGCCCAAATATCAAAGTTTCTCCT 59.288 41.667 0.00 0.00 0.00 3.69
2125 2181 4.466015 TGGCCCAAATATCAAAGTTTCTCC 59.534 41.667 0.00 0.00 0.00 3.71
2126 2182 5.659440 TGGCCCAAATATCAAAGTTTCTC 57.341 39.130 0.00 0.00 0.00 2.87
2127 2183 6.183360 GCTATGGCCCAAATATCAAAGTTTCT 60.183 38.462 0.00 0.00 0.00 2.52
2128 2184 5.985530 GCTATGGCCCAAATATCAAAGTTTC 59.014 40.000 0.00 0.00 0.00 2.78
2129 2185 5.917462 GCTATGGCCCAAATATCAAAGTTT 58.083 37.500 0.00 0.00 0.00 2.66
2130 2186 5.535753 GCTATGGCCCAAATATCAAAGTT 57.464 39.130 0.00 0.00 0.00 2.66
2145 2201 0.610174 TGAGATCGGATGGCTATGGC 59.390 55.000 0.00 0.00 37.82 4.40
2146 2202 2.765135 AGATGAGATCGGATGGCTATGG 59.235 50.000 0.00 0.00 0.00 2.74
2147 2203 3.700539 AGAGATGAGATCGGATGGCTATG 59.299 47.826 0.00 0.00 0.00 2.23
2148 2204 3.979911 AGAGATGAGATCGGATGGCTAT 58.020 45.455 0.00 0.00 0.00 2.97
2149 2205 3.448093 AGAGATGAGATCGGATGGCTA 57.552 47.619 0.00 0.00 0.00 3.93
2150 2206 2.307496 AGAGATGAGATCGGATGGCT 57.693 50.000 0.00 0.00 0.00 4.75
2151 2207 3.119173 CCTTAGAGATGAGATCGGATGGC 60.119 52.174 0.00 0.00 0.00 4.40
2152 2208 4.339748 TCCTTAGAGATGAGATCGGATGG 58.660 47.826 0.00 0.00 0.00 3.51
2153 2209 5.651576 TCATCCTTAGAGATGAGATCGGATG 59.348 44.000 10.83 10.83 45.98 3.51
2154 2210 5.825532 TCATCCTTAGAGATGAGATCGGAT 58.174 41.667 8.58 0.00 45.98 4.18
2155 2211 5.248380 TCATCCTTAGAGATGAGATCGGA 57.752 43.478 8.58 0.00 45.98 4.55
2163 2219 8.733458 TCAAACACATTTTCATCCTTAGAGATG 58.267 33.333 4.91 4.91 44.21 2.90
2164 2220 8.868522 TCAAACACATTTTCATCCTTAGAGAT 57.131 30.769 0.00 0.00 0.00 2.75
2165 2221 8.690203 TTCAAACACATTTTCATCCTTAGAGA 57.310 30.769 0.00 0.00 0.00 3.10
2166 2222 8.571336 ACTTCAAACACATTTTCATCCTTAGAG 58.429 33.333 0.00 0.00 0.00 2.43
2167 2223 8.463930 ACTTCAAACACATTTTCATCCTTAGA 57.536 30.769 0.00 0.00 0.00 2.10
2168 2224 9.612620 GTACTTCAAACACATTTTCATCCTTAG 57.387 33.333 0.00 0.00 0.00 2.18
2169 2225 9.349713 AGTACTTCAAACACATTTTCATCCTTA 57.650 29.630 0.00 0.00 0.00 2.69
2170 2226 8.237811 AGTACTTCAAACACATTTTCATCCTT 57.762 30.769 0.00 0.00 0.00 3.36
2171 2227 7.823745 AGTACTTCAAACACATTTTCATCCT 57.176 32.000 0.00 0.00 0.00 3.24
2172 2228 9.612620 CTTAGTACTTCAAACACATTTTCATCC 57.387 33.333 0.00 0.00 0.00 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.