Multiple sequence alignment - TraesCS5A01G347100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G347100 chr5A 100.000 2952 0 0 1 2952 549360720 549357769 0.000000e+00 5452.0
1 TraesCS5A01G347100 chr5A 76.923 936 175 22 452 1361 549352059 549351139 7.350000e-136 494.0
2 TraesCS5A01G347100 chr5D 90.807 2056 111 24 296 2320 435519815 435517807 0.000000e+00 2678.0
3 TraesCS5A01G347100 chr5D 76.036 893 178 23 454 1337 435493241 435492376 5.850000e-117 431.0
4 TraesCS5A01G347100 chr5D 87.879 264 11 11 26 279 435520213 435519961 1.040000e-74 291.0
5 TraesCS5A01G347100 chr5D 93.293 164 10 1 2722 2884 435517809 435517646 1.060000e-59 241.0
6 TraesCS5A01G347100 chr5B 90.835 1593 105 20 325 1904 528787018 528785454 0.000000e+00 2095.0
7 TraesCS5A01G347100 chr5B 77.622 925 176 20 452 1361 528780036 528779128 1.560000e-147 532.0
8 TraesCS5A01G347100 chr5B 85.897 312 20 10 26 329 528787561 528787266 7.940000e-81 311.0
9 TraesCS5A01G347100 chr5B 93.443 61 2 2 2066 2125 528785457 528785398 4.050000e-14 89.8
10 TraesCS5A01G347100 chr3B 75.855 994 199 36 456 1431 752285894 752284924 4.460000e-128 468.0
11 TraesCS5A01G347100 chr6D 94.915 177 9 0 1125 1301 471104530 471104354 8.060000e-71 278.0
12 TraesCS5A01G347100 chr6D 86.905 84 11 0 554 637 448646754 448646837 8.710000e-16 95.3
13 TraesCS5A01G347100 chr6A 78.231 147 31 1 491 637 594721358 594721503 3.130000e-15 93.5
14 TraesCS5A01G347100 chr3D 75.949 158 35 3 482 637 14041884 14042040 8.770000e-11 78.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G347100 chr5A 549357769 549360720 2951 True 5452.000000 5452 100.000000 1 2952 1 chr5A.!!$R2 2951
1 TraesCS5A01G347100 chr5A 549351139 549352059 920 True 494.000000 494 76.923000 452 1361 1 chr5A.!!$R1 909
2 TraesCS5A01G347100 chr5D 435517646 435520213 2567 True 1070.000000 2678 90.659667 26 2884 3 chr5D.!!$R2 2858
3 TraesCS5A01G347100 chr5D 435492376 435493241 865 True 431.000000 431 76.036000 454 1337 1 chr5D.!!$R1 883
4 TraesCS5A01G347100 chr5B 528785398 528787561 2163 True 831.933333 2095 90.058333 26 2125 3 chr5B.!!$R2 2099
5 TraesCS5A01G347100 chr5B 528779128 528780036 908 True 532.000000 532 77.622000 452 1361 1 chr5B.!!$R1 909
6 TraesCS5A01G347100 chr3B 752284924 752285894 970 True 468.000000 468 75.855000 456 1431 1 chr3B.!!$R1 975

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
407 802 0.112412 TTTTCCACCTTCCCTGCCTC 59.888 55.0 0.0 0.0 0.0 4.7 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2212 2676 1.063006 CGACCAAGATGCGGCATTG 59.937 57.895 17.78 12.79 0.0 2.82 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 3.942351 TGAGGTCAGCAACATCCAG 57.058 52.632 2.12 0.00 37.90 3.86
19 20 1.059098 TGAGGTCAGCAACATCCAGT 58.941 50.000 2.12 0.00 37.90 4.00
20 21 1.002430 TGAGGTCAGCAACATCCAGTC 59.998 52.381 2.12 0.00 37.90 3.51
21 22 1.002430 GAGGTCAGCAACATCCAGTCA 59.998 52.381 0.00 0.00 32.48 3.41
22 23 1.002888 AGGTCAGCAACATCCAGTCAG 59.997 52.381 0.00 0.00 0.00 3.51
23 24 1.271054 GGTCAGCAACATCCAGTCAGT 60.271 52.381 0.00 0.00 0.00 3.41
24 25 2.498167 GTCAGCAACATCCAGTCAGTT 58.502 47.619 0.00 0.00 0.00 3.16
31 32 3.032017 ACATCCAGTCAGTTCTTGTCG 57.968 47.619 0.00 0.00 0.00 4.35
49 50 3.928375 TGTCGCCGTTTTATTCCTAGTTC 59.072 43.478 0.00 0.00 0.00 3.01
67 68 0.605050 TCGTGCAGCACATTAAGGCA 60.605 50.000 25.19 0.00 33.40 4.75
78 79 3.866910 CACATTAAGGCATGGATGTTTGC 59.133 43.478 0.00 0.00 38.14 3.68
85 86 2.416431 GGCATGGATGTTTGCTCTTCAC 60.416 50.000 0.00 0.00 38.88 3.18
86 87 2.416431 GCATGGATGTTTGCTCTTCACC 60.416 50.000 0.00 0.00 35.95 4.02
87 88 2.655090 TGGATGTTTGCTCTTCACCA 57.345 45.000 0.00 0.00 0.00 4.17
88 89 2.507484 TGGATGTTTGCTCTTCACCAG 58.493 47.619 0.00 0.00 0.00 4.00
90 91 2.887152 GGATGTTTGCTCTTCACCAGTT 59.113 45.455 0.00 0.00 0.00 3.16
91 92 3.319122 GGATGTTTGCTCTTCACCAGTTT 59.681 43.478 0.00 0.00 0.00 2.66
92 93 4.518970 GGATGTTTGCTCTTCACCAGTTTA 59.481 41.667 0.00 0.00 0.00 2.01
118 124 1.207791 CAAGGATGTCTAGGGCTGGT 58.792 55.000 0.00 0.00 0.00 4.00
145 154 4.766891 TGAATTCTGTCCCAAGTGAATTCC 59.233 41.667 18.47 0.00 46.70 3.01
146 155 2.472695 TCTGTCCCAAGTGAATTCCG 57.527 50.000 2.27 0.00 0.00 4.30
172 181 4.365514 TCAGGTCAGTTTGATGGCTTTA 57.634 40.909 0.00 0.00 0.00 1.85
173 182 4.724399 TCAGGTCAGTTTGATGGCTTTAA 58.276 39.130 0.00 0.00 0.00 1.52
174 183 5.324409 TCAGGTCAGTTTGATGGCTTTAAT 58.676 37.500 0.00 0.00 0.00 1.40
175 184 5.774690 TCAGGTCAGTTTGATGGCTTTAATT 59.225 36.000 0.00 0.00 0.00 1.40
176 185 6.267471 TCAGGTCAGTTTGATGGCTTTAATTT 59.733 34.615 0.00 0.00 0.00 1.82
231 241 4.789012 TTGTCAGATTTCTGGGCATTTC 57.211 40.909 7.68 0.00 43.91 2.17
281 424 3.181461 ACTGCTGCATACCATTCTACCTC 60.181 47.826 1.31 0.00 0.00 3.85
291 434 5.599999 ACCATTCTACCTCTGATGTACAC 57.400 43.478 0.00 0.00 0.00 2.90
292 435 5.273208 ACCATTCTACCTCTGATGTACACT 58.727 41.667 0.00 0.00 0.00 3.55
293 436 5.721960 ACCATTCTACCTCTGATGTACACTT 59.278 40.000 0.00 0.00 0.00 3.16
294 437 6.045318 CCATTCTACCTCTGATGTACACTTG 58.955 44.000 0.00 0.00 0.00 3.16
331 474 8.660373 CAAGGTGTCACATACTAAGAAATTCTC 58.340 37.037 5.12 0.00 0.00 2.87
332 475 7.331791 AGGTGTCACATACTAAGAAATTCTCC 58.668 38.462 5.12 0.00 0.00 3.71
333 476 7.181125 AGGTGTCACATACTAAGAAATTCTCCT 59.819 37.037 5.12 0.00 0.00 3.69
334 477 7.492994 GGTGTCACATACTAAGAAATTCTCCTC 59.507 40.741 5.12 0.00 0.00 3.71
336 479 6.697892 GTCACATACTAAGAAATTCTCCTCCG 59.302 42.308 0.00 0.00 0.00 4.63
345 740 1.977293 ATTCTCCTCCGGAAGCAGCC 61.977 60.000 5.23 0.00 0.00 4.85
363 758 2.100605 CCAACAGAGGCACCTAAGTC 57.899 55.000 0.00 0.00 0.00 3.01
399 794 1.253100 TCGGGCAATTTTCCACCTTC 58.747 50.000 0.00 0.00 0.00 3.46
407 802 0.112412 TTTTCCACCTTCCCTGCCTC 59.888 55.000 0.00 0.00 0.00 4.70
436 831 2.040145 TGCTCATTTGGTGTCCATCTCA 59.960 45.455 0.00 0.00 31.53 3.27
450 845 1.434622 ATCTCATTGGCAGCTTCGCG 61.435 55.000 0.00 0.00 0.00 5.87
472 874 1.375396 CCTGTTCGACGGAATGGCA 60.375 57.895 0.00 0.00 34.05 4.92
550 955 0.839277 TGCCGGAAGATGTGATCCAT 59.161 50.000 5.05 0.00 35.34 3.41
563 968 1.211818 GATCCATCTCGTGCTGTCGC 61.212 60.000 0.00 0.00 0.00 5.19
649 1060 3.470567 GTGCCGTCTCTTCGCGTG 61.471 66.667 5.77 0.00 0.00 5.34
650 1061 3.666253 TGCCGTCTCTTCGCGTGA 61.666 61.111 5.77 5.14 0.00 4.35
651 1062 2.202623 GCCGTCTCTTCGCGTGAT 60.203 61.111 5.77 0.00 0.00 3.06
652 1063 2.224885 GCCGTCTCTTCGCGTGATC 61.225 63.158 5.77 2.22 0.00 2.92
653 1064 1.934956 CCGTCTCTTCGCGTGATCG 60.935 63.158 5.77 12.68 40.37 3.69
829 1262 3.573491 GGCTCCGTTATGCCGTGC 61.573 66.667 0.00 0.00 39.71 5.34
831 1264 2.186903 CTCCGTTATGCCGTGCCT 59.813 61.111 0.00 0.00 0.00 4.75
972 1405 5.109500 AGGATTTCTCTCTGGATGTTTCC 57.891 43.478 0.00 0.00 42.94 3.13
1031 1464 2.351726 GTGTAATCAACATCGGGACTGC 59.648 50.000 0.00 0.00 41.10 4.40
1050 1483 4.941873 ACTGCCTTACCGAAATCCTTAAAG 59.058 41.667 0.00 0.00 0.00 1.85
1095 1529 1.281925 TTGGCTCTCAGGATTCCCCC 61.282 60.000 0.00 0.00 34.66 5.40
1155 1589 1.813513 CTGACTGTCATGGTTGGACC 58.186 55.000 11.45 0.00 39.22 4.46
1185 1619 3.710209 AAGAGCTTGCCATCACTAGTT 57.290 42.857 0.00 0.00 0.00 2.24
1205 1639 2.357075 TGCGGCATTTATAAACACCGA 58.643 42.857 30.57 18.91 40.31 4.69
1227 1665 5.294552 CGAATATGTCTTGAAGGGTTCTTCC 59.705 44.000 4.01 0.00 46.61 3.46
1262 1704 0.613260 GGGTACTGTGGTCATGAGCA 59.387 55.000 23.20 23.20 36.34 4.26
1361 1806 6.708054 ACAGCTGAATACTTTATGGTATGCTC 59.292 38.462 23.35 0.00 31.26 4.26
1378 1823 3.206150 TGCTCACACTCTTTTCCAGTTC 58.794 45.455 0.00 0.00 0.00 3.01
1379 1824 3.206150 GCTCACACTCTTTTCCAGTTCA 58.794 45.455 0.00 0.00 0.00 3.18
1380 1825 3.817647 GCTCACACTCTTTTCCAGTTCAT 59.182 43.478 0.00 0.00 0.00 2.57
1381 1826 4.276926 GCTCACACTCTTTTCCAGTTCATT 59.723 41.667 0.00 0.00 0.00 2.57
1576 2025 1.552337 AGTGACTGGTGTATGGCTCAG 59.448 52.381 0.00 0.00 0.00 3.35
1733 2182 0.881118 AAATTGCCACGTACTGCTGG 59.119 50.000 0.00 0.00 0.00 4.85
1776 2225 3.320256 TGTTTGCAACAGCAATGGTATGA 59.680 39.130 0.00 0.00 46.63 2.15
1779 2228 4.898829 TGCAACAGCAATGGTATGATAC 57.101 40.909 0.00 0.00 34.85 2.24
1794 2243 6.140303 GTATGATACCACGACTGAAACCTA 57.860 41.667 0.00 0.00 0.00 3.08
1825 2274 7.599998 CCAAAGGACAAATTCTTGGTATCAAAG 59.400 37.037 0.00 0.00 36.82 2.77
1860 2309 6.025896 CAGTCGAAATCAATCATGTGAAAGG 58.974 40.000 0.00 0.00 0.00 3.11
2140 2604 5.475564 GTGAAATGTAAACCTAGGCCAAAGA 59.524 40.000 9.30 0.00 0.00 2.52
2146 2610 4.455070 AAACCTAGGCCAAAGAAGAAGT 57.545 40.909 9.30 0.00 0.00 3.01
2162 2626 4.852134 AGAAGTGCATGCAACATGTTTA 57.148 36.364 24.58 1.19 0.00 2.01
2197 2661 2.420022 GTCAATGCCACTATGACACCAC 59.580 50.000 0.00 0.00 42.31 4.16
2211 2675 2.948979 GACACCACACACCTTTCATTCA 59.051 45.455 0.00 0.00 0.00 2.57
2212 2676 2.687935 ACACCACACACCTTTCATTCAC 59.312 45.455 0.00 0.00 0.00 3.18
2217 2681 3.737266 CACACACCTTTCATTCACAATGC 59.263 43.478 0.00 0.00 38.77 3.56
2218 2682 3.243839 ACACACCTTTCATTCACAATGCC 60.244 43.478 0.00 0.00 38.77 4.40
2227 2691 0.527113 TTCACAATGCCGCATCTTGG 59.473 50.000 6.27 0.00 0.00 3.61
2230 2694 1.063006 CAATGCCGCATCTTGGTCG 59.937 57.895 6.27 0.00 0.00 4.79
2231 2695 1.078497 AATGCCGCATCTTGGTCGA 60.078 52.632 6.27 0.00 0.00 4.20
2240 2704 2.032178 GCATCTTGGTCGACCATTTAGC 59.968 50.000 36.52 30.31 46.97 3.09
2241 2705 2.396590 TCTTGGTCGACCATTTAGCC 57.603 50.000 36.52 7.87 46.97 3.93
2259 2723 2.440627 AGCCTGCTCATGATCAATACCA 59.559 45.455 0.00 0.00 0.00 3.25
2261 2725 3.252701 GCCTGCTCATGATCAATACCAAG 59.747 47.826 0.00 0.00 0.00 3.61
2264 2728 4.466827 TGCTCATGATCAATACCAAGCAT 58.533 39.130 0.00 0.00 33.88 3.79
2265 2729 4.517832 TGCTCATGATCAATACCAAGCATC 59.482 41.667 0.00 0.00 33.88 3.91
2288 2752 4.649845 TGGTGATGCCATCTGCTG 57.350 55.556 6.21 0.00 43.61 4.41
2308 2772 1.172180 GGGCAACAACTACAGCTGCA 61.172 55.000 15.27 0.00 34.66 4.41
2325 2789 3.255032 AAGAGGTGCTTGGTGGCT 58.745 55.556 0.00 0.00 34.93 4.75
2326 2790 1.228367 AAGAGGTGCTTGGTGGCTG 60.228 57.895 0.00 0.00 34.93 4.85
2327 2791 1.999634 AAGAGGTGCTTGGTGGCTGT 62.000 55.000 0.00 0.00 34.93 4.40
2328 2792 1.127567 AGAGGTGCTTGGTGGCTGTA 61.128 55.000 0.00 0.00 0.00 2.74
2329 2793 0.674895 GAGGTGCTTGGTGGCTGTAG 60.675 60.000 0.00 0.00 0.00 2.74
2330 2794 2.335712 GGTGCTTGGTGGCTGTAGC 61.336 63.158 0.00 0.00 41.14 3.58
2331 2795 1.302832 GTGCTTGGTGGCTGTAGCT 60.303 57.895 3.63 0.00 41.70 3.32
2332 2796 0.036388 GTGCTTGGTGGCTGTAGCTA 60.036 55.000 3.63 0.00 41.70 3.32
2340 2804 2.715749 TGGCTGTAGCTACATGCATT 57.284 45.000 31.29 0.00 45.94 3.56
2341 2805 3.003394 TGGCTGTAGCTACATGCATTT 57.997 42.857 31.29 0.00 45.94 2.32
2342 2806 2.684374 TGGCTGTAGCTACATGCATTTG 59.316 45.455 31.29 19.99 45.94 2.32
2343 2807 2.542411 GGCTGTAGCTACATGCATTTGC 60.542 50.000 31.29 25.74 45.94 3.68
2344 2808 2.357009 GCTGTAGCTACATGCATTTGCT 59.643 45.455 28.38 18.02 45.94 3.91
2345 2809 3.791122 GCTGTAGCTACATGCATTTGCTG 60.791 47.826 28.38 16.29 45.94 4.41
2346 2810 3.346315 TGTAGCTACATGCATTTGCTGT 58.654 40.909 22.67 10.71 45.94 4.40
2347 2811 3.374988 TGTAGCTACATGCATTTGCTGTC 59.625 43.478 22.67 15.80 45.94 3.51
2348 2812 2.439409 AGCTACATGCATTTGCTGTCA 58.561 42.857 14.61 0.00 45.94 3.58
2349 2813 2.821378 AGCTACATGCATTTGCTGTCAA 59.179 40.909 14.61 0.00 45.94 3.18
2350 2814 3.119602 AGCTACATGCATTTGCTGTCAAG 60.120 43.478 14.61 1.10 45.94 3.02
2351 2815 3.366679 GCTACATGCATTTGCTGTCAAGT 60.367 43.478 0.00 0.00 42.66 3.16
2352 2816 4.142622 GCTACATGCATTTGCTGTCAAGTA 60.143 41.667 0.00 0.00 42.66 2.24
2353 2817 4.852134 ACATGCATTTGCTGTCAAGTAA 57.148 36.364 0.00 0.00 42.66 2.24
2354 2818 4.549458 ACATGCATTTGCTGTCAAGTAAC 58.451 39.130 0.00 0.00 42.66 2.50
2355 2819 4.037803 ACATGCATTTGCTGTCAAGTAACA 59.962 37.500 0.00 0.00 42.66 2.41
2356 2820 4.852134 TGCATTTGCTGTCAAGTAACAT 57.148 36.364 3.94 0.00 42.66 2.71
2357 2821 4.548494 TGCATTTGCTGTCAAGTAACATG 58.452 39.130 3.94 0.00 42.66 3.21
2358 2822 4.277921 TGCATTTGCTGTCAAGTAACATGA 59.722 37.500 0.00 0.00 42.66 3.07
2359 2823 5.047872 TGCATTTGCTGTCAAGTAACATGAT 60.048 36.000 0.00 0.00 42.66 2.45
2360 2824 6.150809 TGCATTTGCTGTCAAGTAACATGATA 59.849 34.615 0.00 0.00 42.66 2.15
2361 2825 7.028962 GCATTTGCTGTCAAGTAACATGATAA 58.971 34.615 0.00 0.00 38.21 1.75
2362 2826 7.703621 GCATTTGCTGTCAAGTAACATGATAAT 59.296 33.333 0.00 0.00 38.21 1.28
2363 2827 9.016623 CATTTGCTGTCAAGTAACATGATAATG 57.983 33.333 0.00 0.00 33.12 1.90
2364 2828 6.122850 TGCTGTCAAGTAACATGATAATGC 57.877 37.500 0.00 0.00 0.00 3.56
2365 2829 5.882000 TGCTGTCAAGTAACATGATAATGCT 59.118 36.000 0.00 0.00 0.00 3.79
2366 2830 6.375174 TGCTGTCAAGTAACATGATAATGCTT 59.625 34.615 0.00 0.00 0.00 3.91
2367 2831 6.690098 GCTGTCAAGTAACATGATAATGCTTG 59.310 38.462 0.00 8.16 34.80 4.01
2368 2832 7.414429 GCTGTCAAGTAACATGATAATGCTTGA 60.414 37.037 15.68 15.68 38.60 3.02
2369 2833 8.510243 TGTCAAGTAACATGATAATGCTTGAT 57.490 30.769 19.43 0.00 41.48 2.57
2370 2834 8.959548 TGTCAAGTAACATGATAATGCTTGATT 58.040 29.630 19.43 0.00 41.48 2.57
2371 2835 9.229784 GTCAAGTAACATGATAATGCTTGATTG 57.770 33.333 19.43 3.35 41.48 2.67
2372 2836 9.176460 TCAAGTAACATGATAATGCTTGATTGA 57.824 29.630 15.68 2.42 36.82 2.57
2373 2837 9.961265 CAAGTAACATGATAATGCTTGATTGAT 57.039 29.630 0.00 0.00 35.29 2.57
2405 2869 9.550406 AAATCCATCATATTGCTAAAAACATGG 57.450 29.630 0.00 0.00 0.00 3.66
2406 2870 7.894753 TCCATCATATTGCTAAAAACATGGA 57.105 32.000 0.00 0.00 35.90 3.41
2407 2871 7.715657 TCCATCATATTGCTAAAAACATGGAC 58.284 34.615 0.00 0.00 33.82 4.02
2408 2872 7.341512 TCCATCATATTGCTAAAAACATGGACA 59.658 33.333 0.00 0.00 33.82 4.02
2409 2873 8.145767 CCATCATATTGCTAAAAACATGGACAT 58.854 33.333 0.00 0.00 31.56 3.06
2410 2874 9.537192 CATCATATTGCTAAAAACATGGACATT 57.463 29.630 0.00 0.00 0.00 2.71
2412 2876 9.941325 TCATATTGCTAAAAACATGGACATTTT 57.059 25.926 0.00 2.20 0.00 1.82
2417 2881 9.770097 TTGCTAAAAACATGGACATTTTATTGA 57.230 25.926 0.00 0.00 30.60 2.57
2418 2882 9.421806 TGCTAAAAACATGGACATTTTATTGAG 57.578 29.630 0.00 0.00 30.60 3.02
2419 2883 8.872845 GCTAAAAACATGGACATTTTATTGAGG 58.127 33.333 0.00 0.00 30.60 3.86
2420 2884 9.369904 CTAAAAACATGGACATTTTATTGAGGG 57.630 33.333 0.00 0.00 30.60 4.30
2421 2885 6.933514 AAACATGGACATTTTATTGAGGGT 57.066 33.333 0.00 0.00 0.00 4.34
2422 2886 6.933514 AACATGGACATTTTATTGAGGGTT 57.066 33.333 0.00 0.00 0.00 4.11
2423 2887 6.530019 ACATGGACATTTTATTGAGGGTTC 57.470 37.500 0.00 0.00 0.00 3.62
2424 2888 6.256053 ACATGGACATTTTATTGAGGGTTCT 58.744 36.000 0.00 0.00 0.00 3.01
2425 2889 6.378280 ACATGGACATTTTATTGAGGGTTCTC 59.622 38.462 0.00 0.00 40.36 2.87
2436 2900 4.543590 TGAGGGTTCTCATCTTGTCTTC 57.456 45.455 0.00 0.00 44.39 2.87
2437 2901 3.903714 TGAGGGTTCTCATCTTGTCTTCA 59.096 43.478 0.00 0.00 44.39 3.02
2438 2902 4.249661 GAGGGTTCTCATCTTGTCTTCAC 58.750 47.826 0.00 0.00 39.74 3.18
2439 2903 3.648067 AGGGTTCTCATCTTGTCTTCACA 59.352 43.478 0.00 0.00 0.00 3.58
2440 2904 4.103153 AGGGTTCTCATCTTGTCTTCACAA 59.897 41.667 0.00 0.00 40.40 3.33
2441 2905 5.006386 GGGTTCTCATCTTGTCTTCACAAT 58.994 41.667 0.00 0.00 41.82 2.71
2442 2906 5.106396 GGGTTCTCATCTTGTCTTCACAATG 60.106 44.000 0.00 0.00 41.82 2.82
2443 2907 5.702670 GGTTCTCATCTTGTCTTCACAATGA 59.297 40.000 0.00 0.00 41.82 2.57
2444 2908 6.128336 GGTTCTCATCTTGTCTTCACAATGAG 60.128 42.308 10.34 10.34 44.34 2.90
2445 2909 6.350629 TCTCATCTTGTCTTCACAATGAGA 57.649 37.500 13.48 13.48 46.77 3.27
2446 2910 6.762333 TCTCATCTTGTCTTCACAATGAGAA 58.238 36.000 14.50 0.00 46.37 2.87
2447 2911 7.219322 TCTCATCTTGTCTTCACAATGAGAAA 58.781 34.615 14.50 0.11 46.37 2.52
2448 2912 7.387122 TCTCATCTTGTCTTCACAATGAGAAAG 59.613 37.037 14.50 2.39 46.37 2.62
2449 2913 6.994496 TCATCTTGTCTTCACAATGAGAAAGT 59.006 34.615 0.00 0.00 41.82 2.66
2450 2914 7.500227 TCATCTTGTCTTCACAATGAGAAAGTT 59.500 33.333 0.00 0.00 41.82 2.66
2451 2915 7.251704 TCTTGTCTTCACAATGAGAAAGTTC 57.748 36.000 0.00 0.00 41.82 3.01
2452 2916 6.823182 TCTTGTCTTCACAATGAGAAAGTTCA 59.177 34.615 0.00 0.00 41.82 3.18
2453 2917 7.336679 TCTTGTCTTCACAATGAGAAAGTTCAA 59.663 33.333 0.00 0.00 41.82 2.69
2454 2918 7.572523 TGTCTTCACAATGAGAAAGTTCAAT 57.427 32.000 0.00 0.00 0.00 2.57
2455 2919 7.999679 TGTCTTCACAATGAGAAAGTTCAATT 58.000 30.769 0.00 0.00 0.00 2.32
2456 2920 8.469200 TGTCTTCACAATGAGAAAGTTCAATTT 58.531 29.630 0.00 0.00 0.00 1.82
2457 2921 8.749499 GTCTTCACAATGAGAAAGTTCAATTTG 58.251 33.333 0.00 0.00 0.00 2.32
2458 2922 7.922278 TCTTCACAATGAGAAAGTTCAATTTGG 59.078 33.333 0.00 0.00 0.00 3.28
2459 2923 7.111247 TCACAATGAGAAAGTTCAATTTGGT 57.889 32.000 0.00 0.00 0.00 3.67
2460 2924 6.979817 TCACAATGAGAAAGTTCAATTTGGTG 59.020 34.615 0.00 0.00 0.00 4.17
2461 2925 5.754890 ACAATGAGAAAGTTCAATTTGGTGC 59.245 36.000 0.00 0.00 0.00 5.01
2462 2926 5.796424 ATGAGAAAGTTCAATTTGGTGCT 57.204 34.783 0.00 0.00 0.00 4.40
2463 2927 5.186996 TGAGAAAGTTCAATTTGGTGCTC 57.813 39.130 0.00 0.00 0.00 4.26
2464 2928 4.889409 TGAGAAAGTTCAATTTGGTGCTCT 59.111 37.500 0.00 0.00 0.00 4.09
2465 2929 5.360714 TGAGAAAGTTCAATTTGGTGCTCTT 59.639 36.000 0.00 0.00 0.00 2.85
2466 2930 6.127366 TGAGAAAGTTCAATTTGGTGCTCTTT 60.127 34.615 0.00 0.00 0.00 2.52
2467 2931 7.068103 TGAGAAAGTTCAATTTGGTGCTCTTTA 59.932 33.333 0.00 0.00 0.00 1.85
2468 2932 7.428826 AGAAAGTTCAATTTGGTGCTCTTTAG 58.571 34.615 0.00 0.00 0.00 1.85
2469 2933 6.715347 AAGTTCAATTTGGTGCTCTTTAGT 57.285 33.333 0.00 0.00 0.00 2.24
2470 2934 6.715347 AGTTCAATTTGGTGCTCTTTAGTT 57.285 33.333 0.00 0.00 0.00 2.24
2471 2935 7.112452 AGTTCAATTTGGTGCTCTTTAGTTT 57.888 32.000 0.00 0.00 0.00 2.66
2472 2936 6.980397 AGTTCAATTTGGTGCTCTTTAGTTTG 59.020 34.615 0.00 0.00 0.00 2.93
2473 2937 6.463995 TCAATTTGGTGCTCTTTAGTTTGT 57.536 33.333 0.00 0.00 0.00 2.83
2474 2938 6.872920 TCAATTTGGTGCTCTTTAGTTTGTT 58.127 32.000 0.00 0.00 0.00 2.83
2475 2939 6.756074 TCAATTTGGTGCTCTTTAGTTTGTTG 59.244 34.615 0.00 0.00 0.00 3.33
2476 2940 4.647424 TTGGTGCTCTTTAGTTTGTTGG 57.353 40.909 0.00 0.00 0.00 3.77
2477 2941 3.892284 TGGTGCTCTTTAGTTTGTTGGA 58.108 40.909 0.00 0.00 0.00 3.53
2478 2942 3.882888 TGGTGCTCTTTAGTTTGTTGGAG 59.117 43.478 0.00 0.00 0.00 3.86
2479 2943 3.253432 GGTGCTCTTTAGTTTGTTGGAGG 59.747 47.826 0.00 0.00 0.00 4.30
2480 2944 3.883489 GTGCTCTTTAGTTTGTTGGAGGT 59.117 43.478 0.00 0.00 0.00 3.85
2481 2945 4.023963 GTGCTCTTTAGTTTGTTGGAGGTC 60.024 45.833 0.00 0.00 0.00 3.85
2482 2946 3.502595 GCTCTTTAGTTTGTTGGAGGTCC 59.497 47.826 0.00 0.00 0.00 4.46
2483 2947 4.714632 CTCTTTAGTTTGTTGGAGGTCCA 58.285 43.478 0.00 0.00 45.94 4.02
2493 2957 3.151022 GAGGTCCAGGCCTCGAGG 61.151 72.222 27.83 27.83 44.64 4.63
2494 2958 4.787280 AGGTCCAGGCCTCGAGGG 62.787 72.222 32.06 15.92 32.39 4.30
2495 2959 4.779733 GGTCCAGGCCTCGAGGGA 62.780 72.222 32.06 18.05 37.23 4.20
2496 2960 2.683933 GTCCAGGCCTCGAGGGAA 60.684 66.667 32.06 0.00 37.23 3.97
2497 2961 2.121832 TCCAGGCCTCGAGGGAAA 59.878 61.111 32.06 5.50 37.23 3.13
2498 2962 1.306997 TCCAGGCCTCGAGGGAAAT 60.307 57.895 32.06 1.00 37.23 2.17
2499 2963 0.914417 TCCAGGCCTCGAGGGAAATT 60.914 55.000 32.06 0.00 37.23 1.82
2500 2964 0.749454 CCAGGCCTCGAGGGAAATTG 60.749 60.000 32.06 5.90 37.23 2.32
2501 2965 0.035056 CAGGCCTCGAGGGAAATTGT 60.035 55.000 32.06 0.00 37.23 2.71
2502 2966 0.253327 AGGCCTCGAGGGAAATTGTC 59.747 55.000 32.06 12.90 37.23 3.18
2503 2967 1.090052 GGCCTCGAGGGAAATTGTCG 61.090 60.000 32.06 3.58 37.23 4.35
2504 2968 0.108329 GCCTCGAGGGAAATTGTCGA 60.108 55.000 32.06 0.00 40.29 4.20
2505 2969 1.674817 GCCTCGAGGGAAATTGTCGAA 60.675 52.381 32.06 0.00 41.87 3.71
2506 2970 2.906354 CCTCGAGGGAAATTGTCGAAT 58.094 47.619 24.62 0.00 41.87 3.34
2507 2971 2.609459 CCTCGAGGGAAATTGTCGAATG 59.391 50.000 24.62 0.00 41.87 2.67
2508 2972 3.521560 CTCGAGGGAAATTGTCGAATGA 58.478 45.455 3.91 0.00 41.87 2.57
2509 2973 3.259064 TCGAGGGAAATTGTCGAATGAC 58.741 45.455 0.00 0.00 45.71 3.06
2524 2988 7.822575 GTCGAATGACAAGTTAAAACTTCTG 57.177 36.000 5.13 0.00 46.89 3.02
2525 2989 7.627340 GTCGAATGACAAGTTAAAACTTCTGA 58.373 34.615 5.13 0.00 46.89 3.27
2526 2990 7.583040 GTCGAATGACAAGTTAAAACTTCTGAC 59.417 37.037 5.13 0.00 46.89 3.51
2527 2991 7.494625 TCGAATGACAAGTTAAAACTTCTGACT 59.505 33.333 5.13 0.00 45.65 3.41
2528 2992 8.761497 CGAATGACAAGTTAAAACTTCTGACTA 58.239 33.333 5.13 0.00 45.65 2.59
2530 2994 9.614792 AATGACAAGTTAAAACTTCTGACTAGT 57.385 29.630 5.13 0.00 45.65 2.57
2531 2995 9.614792 ATGACAAGTTAAAACTTCTGACTAGTT 57.385 29.630 5.13 0.00 45.65 2.24
2532 2996 9.444600 TGACAAGTTAAAACTTCTGACTAGTTT 57.555 29.630 5.13 2.43 45.65 2.66
2543 3007 8.958119 ACTTCTGACTAGTTTTCATGTTAACA 57.042 30.769 11.41 11.41 0.00 2.41
2544 3008 9.391006 ACTTCTGACTAGTTTTCATGTTAACAA 57.609 29.630 13.23 0.00 0.00 2.83
2554 3018 9.959749 AGTTTTCATGTTAACAATACATCGTTT 57.040 25.926 13.23 0.00 34.11 3.60
2555 3019 9.987901 GTTTTCATGTTAACAATACATCGTTTG 57.012 29.630 13.23 2.34 34.11 2.93
2556 3020 9.952188 TTTTCATGTTAACAATACATCGTTTGA 57.048 25.926 13.23 4.81 34.11 2.69
2557 3021 9.605955 TTTCATGTTAACAATACATCGTTTGAG 57.394 29.630 13.23 0.00 34.11 3.02
2558 3022 7.240674 TCATGTTAACAATACATCGTTTGAGC 58.759 34.615 13.23 0.00 34.11 4.26
2559 3023 6.546972 TGTTAACAATACATCGTTTGAGCA 57.453 33.333 5.64 0.00 0.00 4.26
2560 3024 7.139896 TGTTAACAATACATCGTTTGAGCAT 57.860 32.000 5.64 0.00 0.00 3.79
2561 3025 7.589395 TGTTAACAATACATCGTTTGAGCATT 58.411 30.769 5.64 0.00 0.00 3.56
2562 3026 8.722394 TGTTAACAATACATCGTTTGAGCATTA 58.278 29.630 5.64 0.00 0.00 1.90
2563 3027 8.995906 GTTAACAATACATCGTTTGAGCATTAC 58.004 33.333 0.00 0.00 0.00 1.89
2564 3028 6.735678 ACAATACATCGTTTGAGCATTACA 57.264 33.333 0.00 0.00 0.00 2.41
2565 3029 7.139896 ACAATACATCGTTTGAGCATTACAA 57.860 32.000 0.00 0.00 0.00 2.41
2566 3030 7.761409 ACAATACATCGTTTGAGCATTACAAT 58.239 30.769 0.00 0.00 0.00 2.71
2567 3031 8.888716 ACAATACATCGTTTGAGCATTACAATA 58.111 29.630 0.00 0.00 0.00 1.90
2568 3032 9.715123 CAATACATCGTTTGAGCATTACAATAA 57.285 29.630 0.00 0.00 0.00 1.40
2594 3058 9.852091 AAATAGATCAAGTTGCATCTTTCTTTC 57.148 29.630 17.38 7.12 31.57 2.62
2595 3059 8.804912 ATAGATCAAGTTGCATCTTTCTTTCT 57.195 30.769 17.38 12.17 31.57 2.52
2596 3060 7.521871 AGATCAAGTTGCATCTTTCTTTCTT 57.478 32.000 7.31 0.00 0.00 2.52
2597 3061 7.949434 AGATCAAGTTGCATCTTTCTTTCTTT 58.051 30.769 7.31 0.00 0.00 2.52
2598 3062 8.419442 AGATCAAGTTGCATCTTTCTTTCTTTT 58.581 29.630 7.31 0.00 0.00 2.27
2599 3063 8.953368 ATCAAGTTGCATCTTTCTTTCTTTTT 57.047 26.923 7.31 0.00 0.00 1.94
2600 3064 8.188531 TCAAGTTGCATCTTTCTTTCTTTTTG 57.811 30.769 7.31 0.00 0.00 2.44
2601 3065 6.594284 AGTTGCATCTTTCTTTCTTTTTGC 57.406 33.333 0.00 0.00 0.00 3.68
2602 3066 5.232838 AGTTGCATCTTTCTTTCTTTTTGCG 59.767 36.000 0.00 0.00 0.00 4.85
2603 3067 4.930963 TGCATCTTTCTTTCTTTTTGCGA 58.069 34.783 0.00 0.00 0.00 5.10
2604 3068 5.347342 TGCATCTTTCTTTCTTTTTGCGAA 58.653 33.333 0.00 0.00 0.00 4.70
2605 3069 5.231991 TGCATCTTTCTTTCTTTTTGCGAAC 59.768 36.000 0.00 0.00 0.00 3.95
2606 3070 5.231991 GCATCTTTCTTTCTTTTTGCGAACA 59.768 36.000 0.00 0.00 0.00 3.18
2607 3071 6.237808 GCATCTTTCTTTCTTTTTGCGAACAA 60.238 34.615 0.00 0.00 0.00 2.83
2608 3072 6.869421 TCTTTCTTTCTTTTTGCGAACAAG 57.131 33.333 0.00 0.00 37.04 3.16
2609 3073 6.616947 TCTTTCTTTCTTTTTGCGAACAAGA 58.383 32.000 7.03 7.03 37.04 3.02
2610 3074 7.257722 TCTTTCTTTCTTTTTGCGAACAAGAT 58.742 30.769 10.30 0.00 37.04 2.40
2611 3075 7.432252 TCTTTCTTTCTTTTTGCGAACAAGATC 59.568 33.333 10.30 0.00 37.04 2.75
2612 3076 6.130298 TCTTTCTTTTTGCGAACAAGATCA 57.870 33.333 10.30 3.43 37.04 2.92
2613 3077 6.559810 TCTTTCTTTTTGCGAACAAGATCAA 58.440 32.000 10.30 4.89 37.04 2.57
2614 3078 6.692681 TCTTTCTTTTTGCGAACAAGATCAAG 59.307 34.615 10.30 11.16 37.04 3.02
2615 3079 5.499139 TCTTTTTGCGAACAAGATCAAGT 57.501 34.783 0.00 0.00 37.04 3.16
2616 3080 5.890334 TCTTTTTGCGAACAAGATCAAGTT 58.110 33.333 0.00 0.00 37.04 2.66
2617 3081 5.743398 TCTTTTTGCGAACAAGATCAAGTTG 59.257 36.000 7.43 0.00 37.04 3.16
2618 3082 2.686558 TGCGAACAAGATCAAGTTGC 57.313 45.000 7.43 10.79 0.00 4.17
2619 3083 1.946081 TGCGAACAAGATCAAGTTGCA 59.054 42.857 15.92 15.92 33.06 4.08
2620 3084 2.553602 TGCGAACAAGATCAAGTTGCAT 59.446 40.909 15.92 0.00 31.68 3.96
2621 3085 3.166657 GCGAACAAGATCAAGTTGCATC 58.833 45.455 7.43 2.92 0.00 3.91
2622 3086 3.120060 GCGAACAAGATCAAGTTGCATCT 60.120 43.478 7.43 10.32 0.00 2.90
2623 3087 4.614535 GCGAACAAGATCAAGTTGCATCTT 60.615 41.667 17.62 17.62 39.49 2.40
2624 3088 5.455392 CGAACAAGATCAAGTTGCATCTTT 58.545 37.500 19.41 11.65 37.27 2.52
2625 3089 5.341462 CGAACAAGATCAAGTTGCATCTTTG 59.659 40.000 19.41 17.24 37.27 2.77
2626 3090 5.779529 ACAAGATCAAGTTGCATCTTTGT 57.220 34.783 19.41 17.62 37.27 2.83
2627 3091 5.766222 ACAAGATCAAGTTGCATCTTTGTC 58.234 37.500 19.41 8.57 37.27 3.18
2628 3092 5.159209 CAAGATCAAGTTGCATCTTTGTCC 58.841 41.667 19.41 0.00 37.27 4.02
2629 3093 3.438087 AGATCAAGTTGCATCTTTGTCCG 59.562 43.478 7.31 0.00 0.00 4.79
2630 3094 2.844946 TCAAGTTGCATCTTTGTCCGA 58.155 42.857 7.31 0.00 0.00 4.55
2631 3095 2.548057 TCAAGTTGCATCTTTGTCCGAC 59.452 45.455 7.31 0.00 0.00 4.79
2632 3096 1.523758 AGTTGCATCTTTGTCCGACC 58.476 50.000 0.00 0.00 0.00 4.79
2633 3097 1.202758 AGTTGCATCTTTGTCCGACCA 60.203 47.619 0.00 0.00 0.00 4.02
2634 3098 1.812571 GTTGCATCTTTGTCCGACCAT 59.187 47.619 0.00 0.00 0.00 3.55
2635 3099 1.737838 TGCATCTTTGTCCGACCATC 58.262 50.000 0.00 0.00 0.00 3.51
2636 3100 1.017387 GCATCTTTGTCCGACCATCC 58.983 55.000 0.00 0.00 0.00 3.51
2637 3101 1.678728 GCATCTTTGTCCGACCATCCA 60.679 52.381 0.00 0.00 0.00 3.41
2638 3102 2.710377 CATCTTTGTCCGACCATCCAA 58.290 47.619 0.00 0.00 0.00 3.53
2639 3103 2.472695 TCTTTGTCCGACCATCCAAG 57.527 50.000 0.00 0.00 0.00 3.61
2640 3104 1.697432 TCTTTGTCCGACCATCCAAGT 59.303 47.619 0.00 0.00 0.00 3.16
2641 3105 1.806542 CTTTGTCCGACCATCCAAGTG 59.193 52.381 0.00 0.00 0.00 3.16
2642 3106 1.052617 TTGTCCGACCATCCAAGTGA 58.947 50.000 0.00 0.00 0.00 3.41
2643 3107 1.052617 TGTCCGACCATCCAAGTGAA 58.947 50.000 0.00 0.00 0.00 3.18
2644 3108 1.628340 TGTCCGACCATCCAAGTGAAT 59.372 47.619 0.00 0.00 0.00 2.57
2645 3109 2.039746 TGTCCGACCATCCAAGTGAATT 59.960 45.455 0.00 0.00 0.00 2.17
2646 3110 3.081804 GTCCGACCATCCAAGTGAATTT 58.918 45.455 0.00 0.00 0.00 1.82
2647 3111 3.127030 GTCCGACCATCCAAGTGAATTTC 59.873 47.826 0.00 0.00 0.00 2.17
2648 3112 3.009033 TCCGACCATCCAAGTGAATTTCT 59.991 43.478 0.00 0.00 0.00 2.52
2649 3113 3.758554 CCGACCATCCAAGTGAATTTCTT 59.241 43.478 0.00 0.00 0.00 2.52
2650 3114 4.379813 CCGACCATCCAAGTGAATTTCTTG 60.380 45.833 13.74 13.74 41.06 3.02
2651 3115 4.216257 CGACCATCCAAGTGAATTTCTTGT 59.784 41.667 17.10 4.76 40.15 3.16
2652 3116 5.411361 CGACCATCCAAGTGAATTTCTTGTA 59.589 40.000 17.10 7.44 40.15 2.41
2653 3117 6.575162 ACCATCCAAGTGAATTTCTTGTAC 57.425 37.500 17.10 0.00 40.15 2.90
2654 3118 6.068010 ACCATCCAAGTGAATTTCTTGTACA 58.932 36.000 17.10 0.00 40.15 2.90
2655 3119 6.207417 ACCATCCAAGTGAATTTCTTGTACAG 59.793 38.462 17.10 9.68 40.15 2.74
2656 3120 6.207417 CCATCCAAGTGAATTTCTTGTACAGT 59.793 38.462 17.10 0.00 40.15 3.55
2657 3121 7.255590 CCATCCAAGTGAATTTCTTGTACAGTT 60.256 37.037 17.10 0.00 40.15 3.16
2658 3122 7.639113 TCCAAGTGAATTTCTTGTACAGTTT 57.361 32.000 17.10 0.00 40.15 2.66
2659 3123 8.062065 TCCAAGTGAATTTCTTGTACAGTTTT 57.938 30.769 17.10 0.00 40.15 2.43
2660 3124 8.188139 TCCAAGTGAATTTCTTGTACAGTTTTC 58.812 33.333 17.10 0.00 40.15 2.29
2661 3125 7.435192 CCAAGTGAATTTCTTGTACAGTTTTCC 59.565 37.037 17.10 0.00 40.15 3.13
2662 3126 7.881775 AGTGAATTTCTTGTACAGTTTTCCT 57.118 32.000 0.00 0.00 0.00 3.36
2664 3128 6.417930 GTGAATTTCTTGTACAGTTTTCCTGC 59.582 38.462 0.00 0.00 45.68 4.85
2665 3129 6.096141 TGAATTTCTTGTACAGTTTTCCTGCA 59.904 34.615 0.00 0.00 45.68 4.41
2666 3130 4.893424 TTCTTGTACAGTTTTCCTGCAC 57.107 40.909 0.00 0.00 45.68 4.57
2667 3131 4.150897 TCTTGTACAGTTTTCCTGCACT 57.849 40.909 0.00 0.00 45.68 4.40
2668 3132 4.523083 TCTTGTACAGTTTTCCTGCACTT 58.477 39.130 0.00 0.00 45.68 3.16
2669 3133 4.574828 TCTTGTACAGTTTTCCTGCACTTC 59.425 41.667 0.00 0.00 45.68 3.01
2670 3134 3.879998 TGTACAGTTTTCCTGCACTTCA 58.120 40.909 0.00 0.00 45.68 3.02
2671 3135 3.876914 TGTACAGTTTTCCTGCACTTCAG 59.123 43.478 0.00 0.00 45.68 3.02
2672 3136 3.004752 ACAGTTTTCCTGCACTTCAGT 57.995 42.857 0.00 0.00 45.68 3.41
2673 3137 2.684881 ACAGTTTTCCTGCACTTCAGTG 59.315 45.455 2.31 2.31 45.68 3.66
2682 3146 3.577231 CACTTCAGTGTCACTCGCT 57.423 52.632 1.37 0.00 40.96 4.93
2683 3147 2.706555 CACTTCAGTGTCACTCGCTA 57.293 50.000 1.37 0.00 40.96 4.26
2684 3148 3.013276 CACTTCAGTGTCACTCGCTAA 57.987 47.619 1.37 0.00 40.96 3.09
2685 3149 3.579709 CACTTCAGTGTCACTCGCTAAT 58.420 45.455 1.37 0.00 40.96 1.73
2686 3150 3.990469 CACTTCAGTGTCACTCGCTAATT 59.010 43.478 1.37 0.00 40.96 1.40
2687 3151 3.990469 ACTTCAGTGTCACTCGCTAATTG 59.010 43.478 1.37 0.00 34.88 2.32
2688 3152 2.959516 TCAGTGTCACTCGCTAATTGG 58.040 47.619 1.37 0.00 34.88 3.16
2689 3153 1.394917 CAGTGTCACTCGCTAATTGGC 59.605 52.381 1.37 3.26 34.88 4.52
2700 3164 2.356135 GCTAATTGGCGAGGACTTTCA 58.644 47.619 0.00 0.00 0.00 2.69
2701 3165 2.945668 GCTAATTGGCGAGGACTTTCAT 59.054 45.455 0.00 0.00 0.00 2.57
2702 3166 3.242870 GCTAATTGGCGAGGACTTTCATG 60.243 47.826 0.00 0.00 0.00 3.07
2703 3167 2.496899 ATTGGCGAGGACTTTCATGT 57.503 45.000 0.00 0.00 0.00 3.21
2704 3168 1.522668 TTGGCGAGGACTTTCATGTG 58.477 50.000 0.00 0.00 0.00 3.21
2705 3169 0.955428 TGGCGAGGACTTTCATGTGC 60.955 55.000 0.00 0.00 0.00 4.57
2706 3170 0.674895 GGCGAGGACTTTCATGTGCT 60.675 55.000 0.00 0.00 41.26 4.40
2712 3176 3.087031 AGGACTTTCATGTGCTCATTGG 58.913 45.455 0.00 0.00 33.31 3.16
2713 3177 2.165030 GGACTTTCATGTGCTCATTGGG 59.835 50.000 0.00 0.00 31.15 4.12
2714 3178 2.821969 GACTTTCATGTGCTCATTGGGT 59.178 45.455 0.00 0.00 31.15 4.51
2715 3179 2.821969 ACTTTCATGTGCTCATTGGGTC 59.178 45.455 0.00 0.00 31.15 4.46
2716 3180 2.885135 TTCATGTGCTCATTGGGTCT 57.115 45.000 0.00 0.00 31.15 3.85
2717 3181 2.408271 TCATGTGCTCATTGGGTCTC 57.592 50.000 0.00 0.00 31.15 3.36
2718 3182 1.065199 TCATGTGCTCATTGGGTCTCC 60.065 52.381 0.00 0.00 31.15 3.71
2719 3183 1.064906 CATGTGCTCATTGGGTCTCCT 60.065 52.381 0.00 0.00 31.15 3.69
2720 3184 0.325933 TGTGCTCATTGGGTCTCCTG 59.674 55.000 0.00 0.00 0.00 3.86
2721 3185 0.326264 GTGCTCATTGGGTCTCCTGT 59.674 55.000 0.00 0.00 0.00 4.00
2722 3186 1.067295 TGCTCATTGGGTCTCCTGTT 58.933 50.000 0.00 0.00 0.00 3.16
2723 3187 1.271543 TGCTCATTGGGTCTCCTGTTG 60.272 52.381 0.00 0.00 0.00 3.33
2728 3192 2.818751 TTGGGTCTCCTGTTGTTGTT 57.181 45.000 0.00 0.00 0.00 2.83
2732 3196 2.650322 GGTCTCCTGTTGTTGTTTCCA 58.350 47.619 0.00 0.00 0.00 3.53
2752 3216 1.202976 ACAGGCTTCAGTTTCCAGCAT 60.203 47.619 0.00 0.00 35.05 3.79
2779 3243 6.432607 TTGTAGTTCAGACCGTCTACTATG 57.567 41.667 12.35 0.00 35.31 2.23
2788 3252 4.102838 AGACCGTCTACTATGGCTTCTCTA 59.897 45.833 0.00 0.00 37.86 2.43
2789 3253 4.988029 ACCGTCTACTATGGCTTCTCTAT 58.012 43.478 0.00 0.00 37.86 1.98
2813 3277 0.255604 ACGCCCATGTCCATGAATGA 59.744 50.000 8.82 0.00 41.20 2.57
2857 3321 3.815396 TCAGCTGAGATCGCGCGT 61.815 61.111 30.98 17.41 0.00 6.01
2871 3335 2.528743 CGCGTCTGCCCATCATGTC 61.529 63.158 0.00 0.00 38.08 3.06
2894 3358 2.724977 TCACATGAACTCGTGTCCTC 57.275 50.000 0.00 0.00 43.66 3.71
2895 3359 1.960689 TCACATGAACTCGTGTCCTCA 59.039 47.619 0.00 0.00 43.66 3.86
2896 3360 2.364002 TCACATGAACTCGTGTCCTCAA 59.636 45.455 0.00 0.00 43.66 3.02
2897 3361 2.476619 CACATGAACTCGTGTCCTCAAC 59.523 50.000 0.00 0.00 43.66 3.18
2898 3362 2.069273 CATGAACTCGTGTCCTCAACC 58.931 52.381 0.00 0.00 0.00 3.77
2899 3363 0.391597 TGAACTCGTGTCCTCAACCC 59.608 55.000 0.00 0.00 0.00 4.11
2900 3364 0.666577 GAACTCGTGTCCTCAACCCG 60.667 60.000 0.00 0.00 0.00 5.28
2901 3365 2.095978 AACTCGTGTCCTCAACCCGG 62.096 60.000 0.00 0.00 0.00 5.73
2902 3366 3.934391 CTCGTGTCCTCAACCCGGC 62.934 68.421 0.00 0.00 0.00 6.13
2904 3368 3.948719 GTGTCCTCAACCCGGCCA 61.949 66.667 2.24 0.00 0.00 5.36
2905 3369 3.636231 TGTCCTCAACCCGGCCAG 61.636 66.667 2.24 0.00 0.00 4.85
2906 3370 3.319198 GTCCTCAACCCGGCCAGA 61.319 66.667 2.24 0.00 0.00 3.86
2907 3371 3.319198 TCCTCAACCCGGCCAGAC 61.319 66.667 2.24 0.00 0.00 3.51
2908 3372 3.322466 CCTCAACCCGGCCAGACT 61.322 66.667 2.24 0.00 0.00 3.24
2909 3373 2.266055 CTCAACCCGGCCAGACTC 59.734 66.667 2.24 0.00 0.00 3.36
2910 3374 2.525629 TCAACCCGGCCAGACTCA 60.526 61.111 2.24 0.00 0.00 3.41
2911 3375 2.046892 CAACCCGGCCAGACTCAG 60.047 66.667 2.24 0.00 0.00 3.35
2912 3376 3.322466 AACCCGGCCAGACTCAGG 61.322 66.667 2.24 0.00 0.00 3.86
2920 3384 3.529252 CCAGACTCAGGCACTCAAG 57.471 57.895 0.00 0.00 34.60 3.02
2921 3385 0.673022 CCAGACTCAGGCACTCAAGC 60.673 60.000 0.00 0.00 34.60 4.01
2929 3393 3.978272 GCACTCAAGCCTGACCTG 58.022 61.111 0.00 0.00 0.00 4.00
2930 3394 1.372683 GCACTCAAGCCTGACCTGA 59.627 57.895 0.00 0.00 0.00 3.86
2931 3395 0.035630 GCACTCAAGCCTGACCTGAT 60.036 55.000 0.00 0.00 0.00 2.90
2932 3396 1.612726 GCACTCAAGCCTGACCTGATT 60.613 52.381 0.00 0.00 0.00 2.57
2933 3397 2.355108 GCACTCAAGCCTGACCTGATTA 60.355 50.000 0.00 0.00 0.00 1.75
2934 3398 3.869912 GCACTCAAGCCTGACCTGATTAA 60.870 47.826 0.00 0.00 0.00 1.40
2935 3399 4.326826 CACTCAAGCCTGACCTGATTAAA 58.673 43.478 0.00 0.00 0.00 1.52
2936 3400 4.946157 CACTCAAGCCTGACCTGATTAAAT 59.054 41.667 0.00 0.00 0.00 1.40
2937 3401 5.416952 CACTCAAGCCTGACCTGATTAAATT 59.583 40.000 0.00 0.00 0.00 1.82
2938 3402 5.416952 ACTCAAGCCTGACCTGATTAAATTG 59.583 40.000 0.00 0.00 0.00 2.32
2939 3403 4.158394 TCAAGCCTGACCTGATTAAATTGC 59.842 41.667 0.00 0.00 0.00 3.56
2940 3404 3.973425 AGCCTGACCTGATTAAATTGCT 58.027 40.909 0.00 0.00 0.00 3.91
2941 3405 3.698040 AGCCTGACCTGATTAAATTGCTG 59.302 43.478 0.00 0.00 0.00 4.41
2942 3406 3.696051 GCCTGACCTGATTAAATTGCTGA 59.304 43.478 0.00 0.00 0.00 4.26
2943 3407 4.158394 GCCTGACCTGATTAAATTGCTGAA 59.842 41.667 0.00 0.00 0.00 3.02
2944 3408 5.678107 GCCTGACCTGATTAAATTGCTGAAG 60.678 44.000 0.00 0.00 0.00 3.02
2945 3409 5.416952 CCTGACCTGATTAAATTGCTGAAGT 59.583 40.000 0.00 0.00 0.00 3.01
2946 3410 6.404074 CCTGACCTGATTAAATTGCTGAAGTC 60.404 42.308 0.00 0.00 0.00 3.01
2947 3411 5.415701 TGACCTGATTAAATTGCTGAAGTCC 59.584 40.000 0.00 0.00 0.00 3.85
2948 3412 5.324409 ACCTGATTAAATTGCTGAAGTCCA 58.676 37.500 0.00 0.00 0.00 4.02
2949 3413 5.774690 ACCTGATTAAATTGCTGAAGTCCAA 59.225 36.000 0.00 0.00 0.00 3.53
2950 3414 6.095377 CCTGATTAAATTGCTGAAGTCCAAC 58.905 40.000 0.00 0.00 0.00 3.77
2951 3415 5.698832 TGATTAAATTGCTGAAGTCCAACG 58.301 37.500 0.00 0.00 0.00 4.10
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.002430 GACTGGATGTTGCTGACCTCA 59.998 52.381 0.00 0.00 0.00 3.86
1 2 1.002430 TGACTGGATGTTGCTGACCTC 59.998 52.381 0.00 0.00 0.00 3.85
2 3 1.002888 CTGACTGGATGTTGCTGACCT 59.997 52.381 0.00 0.00 0.00 3.85
3 4 1.271054 ACTGACTGGATGTTGCTGACC 60.271 52.381 0.00 0.00 0.00 4.02
4 5 2.175878 ACTGACTGGATGTTGCTGAC 57.824 50.000 0.00 0.00 0.00 3.51
5 6 2.369860 AGAACTGACTGGATGTTGCTGA 59.630 45.455 0.00 0.00 0.00 4.26
6 7 2.775890 AGAACTGACTGGATGTTGCTG 58.224 47.619 0.00 0.00 0.00 4.41
7 8 3.144506 CAAGAACTGACTGGATGTTGCT 58.855 45.455 0.00 0.00 0.00 3.91
8 9 2.880890 ACAAGAACTGACTGGATGTTGC 59.119 45.455 0.00 0.00 0.00 4.17
9 10 3.185188 CGACAAGAACTGACTGGATGTTG 59.815 47.826 0.00 0.00 0.00 3.33
10 11 3.393800 CGACAAGAACTGACTGGATGTT 58.606 45.455 0.00 0.00 0.00 2.71
11 12 2.868044 GCGACAAGAACTGACTGGATGT 60.868 50.000 0.00 0.00 0.00 3.06
12 13 1.728971 GCGACAAGAACTGACTGGATG 59.271 52.381 0.00 0.00 0.00 3.51
13 14 1.338200 GGCGACAAGAACTGACTGGAT 60.338 52.381 0.00 0.00 0.00 3.41
14 15 0.033504 GGCGACAAGAACTGACTGGA 59.966 55.000 0.00 0.00 0.00 3.86
15 16 1.284982 CGGCGACAAGAACTGACTGG 61.285 60.000 0.00 0.00 0.00 4.00
16 17 0.597637 ACGGCGACAAGAACTGACTG 60.598 55.000 16.62 0.00 0.00 3.51
17 18 0.104304 AACGGCGACAAGAACTGACT 59.896 50.000 16.62 0.00 0.00 3.41
18 19 0.935196 AAACGGCGACAAGAACTGAC 59.065 50.000 16.62 0.00 0.00 3.51
19 20 1.658994 AAAACGGCGACAAGAACTGA 58.341 45.000 16.62 0.00 0.00 3.41
20 21 3.806316 ATAAAACGGCGACAAGAACTG 57.194 42.857 16.62 0.00 0.00 3.16
21 22 3.187842 GGAATAAAACGGCGACAAGAACT 59.812 43.478 16.62 0.00 0.00 3.01
22 23 3.187842 AGGAATAAAACGGCGACAAGAAC 59.812 43.478 16.62 0.00 0.00 3.01
23 24 3.404899 AGGAATAAAACGGCGACAAGAA 58.595 40.909 16.62 0.00 0.00 2.52
24 25 3.048337 AGGAATAAAACGGCGACAAGA 57.952 42.857 16.62 0.00 0.00 3.02
31 32 3.484721 GCACGAACTAGGAATAAAACGGC 60.485 47.826 0.00 0.00 0.00 5.68
49 50 0.452987 ATGCCTTAATGTGCTGCACG 59.547 50.000 25.88 12.71 37.14 5.34
67 68 3.087031 CTGGTGAAGAGCAAACATCCAT 58.913 45.455 0.00 0.00 0.00 3.41
88 89 9.819267 GCCCTAGACATCCTTGTATATATAAAC 57.181 37.037 0.00 0.00 35.79 2.01
90 91 9.201989 CAGCCCTAGACATCCTTGTATATATAA 57.798 37.037 0.00 0.00 35.79 0.98
91 92 7.785028 CCAGCCCTAGACATCCTTGTATATATA 59.215 40.741 0.00 0.00 35.79 0.86
92 93 6.613271 CCAGCCCTAGACATCCTTGTATATAT 59.387 42.308 0.00 0.00 35.79 0.86
118 124 4.984295 TCACTTGGGACAGAATTCATTCA 58.016 39.130 8.44 0.00 42.39 2.57
145 154 1.581934 TCAAACTGACCTGAAGTGCG 58.418 50.000 0.00 0.00 0.00 5.34
146 155 2.227388 CCATCAAACTGACCTGAAGTGC 59.773 50.000 0.00 0.00 0.00 4.40
231 241 3.226346 CATTGGAATGTGGCTTGTCAG 57.774 47.619 0.00 0.00 0.00 3.51
305 448 8.553459 AGAATTTCTTAGTATGTGACACCTTG 57.447 34.615 2.45 0.00 0.00 3.61
332 475 2.032528 TGTTGGCTGCTTCCGGAG 59.967 61.111 3.34 0.00 0.00 4.63
333 476 2.032528 CTGTTGGCTGCTTCCGGA 59.967 61.111 0.00 0.00 0.00 5.14
334 477 2.032528 TCTGTTGGCTGCTTCCGG 59.967 61.111 0.00 0.00 0.00 5.14
336 479 3.993535 CCTCTGTTGGCTGCTTCC 58.006 61.111 0.00 0.00 0.00 3.46
345 740 1.272490 TCGACTTAGGTGCCTCTGTTG 59.728 52.381 0.00 0.00 0.00 3.33
379 774 1.824852 GAAGGTGGAAAATTGCCCGAT 59.175 47.619 0.00 0.00 0.00 4.18
381 776 0.246360 GGAAGGTGGAAAATTGCCCG 59.754 55.000 0.00 0.00 0.00 6.13
407 802 0.314935 ACCAAATGAGCAGCCAAACG 59.685 50.000 0.00 0.00 0.00 3.60
450 845 1.375523 ATTCCGTCGAACAGGTGGC 60.376 57.895 0.00 0.00 0.00 5.01
472 874 0.903924 TCTTGCTGCAGAGCCTCTCT 60.904 55.000 20.43 0.00 45.57 3.10
563 968 1.079543 CTTGACACGAGGGCAGGAG 60.080 63.158 0.00 0.00 0.00 3.69
647 1058 3.682315 CGGCATCGACGCGATCAC 61.682 66.667 15.93 0.00 45.19 3.06
648 1059 3.883180 TCGGCATCGACGCGATCA 61.883 61.111 15.93 0.00 45.19 2.92
831 1264 1.070134 CGGAGAACCCTCACTTTGTGA 59.930 52.381 0.37 0.37 41.20 3.58
939 1372 3.839293 AGAGAAATCCTCAAACTCGACG 58.161 45.455 0.00 0.00 44.40 5.12
972 1405 0.668706 CCTCAAGTGACTGACAGCCG 60.669 60.000 1.25 0.00 0.00 5.52
1031 1464 5.823045 AGATGCTTTAAGGATTTCGGTAAGG 59.177 40.000 0.00 0.00 0.00 2.69
1038 1471 7.765307 TGATTGTCAGATGCTTTAAGGATTTC 58.235 34.615 0.00 0.00 0.00 2.17
1095 1529 1.354040 CTGGCGCAGAAGTAAGACAG 58.646 55.000 10.83 0.00 32.44 3.51
1155 1589 1.068541 GGCAAGCTCTTAAACAACGGG 60.069 52.381 0.00 0.00 0.00 5.28
1185 1619 2.357075 TCGGTGTTTATAAATGCCGCA 58.643 42.857 25.56 17.11 37.69 5.69
1226 1664 5.065988 CAGTACCCATTGAAACTATTTCCGG 59.934 44.000 0.00 0.00 38.90 5.14
1227 1665 5.646360 ACAGTACCCATTGAAACTATTTCCG 59.354 40.000 0.00 0.00 38.90 4.30
1361 1806 7.912250 GCATATAATGAACTGGAAAAGAGTGTG 59.088 37.037 0.00 0.00 0.00 3.82
1378 1823 7.990541 TTAGCAAAACAGCAAGCATATAATG 57.009 32.000 0.00 0.00 36.85 1.90
1379 1824 7.170320 GCATTAGCAAAACAGCAAGCATATAAT 59.830 33.333 0.00 0.00 41.58 1.28
1380 1825 6.476380 GCATTAGCAAAACAGCAAGCATATAA 59.524 34.615 0.00 0.00 41.58 0.98
1381 1826 5.978919 GCATTAGCAAAACAGCAAGCATATA 59.021 36.000 0.00 0.00 41.58 0.86
1576 2025 7.878644 AGAAAGAAAACTAGTCCATGGAAGTAC 59.121 37.037 18.20 11.95 0.00 2.73
1698 2147 4.992951 GGCAATTTCAAAGACAAAGCATCT 59.007 37.500 0.00 0.00 0.00 2.90
1699 2148 4.751098 TGGCAATTTCAAAGACAAAGCATC 59.249 37.500 0.00 0.00 0.00 3.91
1700 2149 4.512571 GTGGCAATTTCAAAGACAAAGCAT 59.487 37.500 0.00 0.00 0.00 3.79
1701 2150 3.870419 GTGGCAATTTCAAAGACAAAGCA 59.130 39.130 0.00 0.00 0.00 3.91
1704 2153 4.116747 ACGTGGCAATTTCAAAGACAAA 57.883 36.364 0.00 0.00 0.00 2.83
1776 2225 4.817517 CTTGTAGGTTTCAGTCGTGGTAT 58.182 43.478 0.00 0.00 0.00 2.73
1779 2228 1.798813 GCTTGTAGGTTTCAGTCGTGG 59.201 52.381 0.00 0.00 0.00 4.94
1794 2243 4.443315 CCAAGAATTTGTCCTTTGGCTTGT 60.443 41.667 0.00 0.00 31.97 3.16
1825 2274 1.442769 TTTCGACTGCCTTGAGATGC 58.557 50.000 0.00 0.00 0.00 3.91
1983 2432 8.829612 TCATACATGCAGACTACATAAACATTG 58.170 33.333 0.00 0.00 0.00 2.82
2047 2507 5.821995 CCAATGGTTGTTTCCAATTTCAGTT 59.178 36.000 0.00 0.00 41.09 3.16
2070 2531 5.458015 CGTTTTTCATTTCTAACCTCACCC 58.542 41.667 0.00 0.00 0.00 4.61
2082 2543 3.958147 AGGTGGTCTTCCGTTTTTCATTT 59.042 39.130 0.00 0.00 36.30 2.32
2140 2604 3.738830 AACATGTTGCATGCACTTCTT 57.261 38.095 22.58 9.32 0.00 2.52
2146 2610 3.510753 AGGATGTAAACATGTTGCATGCA 59.489 39.130 30.42 18.46 36.57 3.96
2162 2626 2.028748 GCATTGACAAGCCAAAGGATGT 60.029 45.455 0.00 0.00 0.00 3.06
2197 2661 3.319755 GGCATTGTGAATGAAAGGTGTG 58.680 45.455 0.40 0.00 41.46 3.82
2211 2675 1.647545 CGACCAAGATGCGGCATTGT 61.648 55.000 17.78 11.82 0.00 2.71
2212 2676 1.063006 CGACCAAGATGCGGCATTG 59.937 57.895 17.78 12.79 0.00 2.82
2217 2681 2.264480 TGGTCGACCAAGATGCGG 59.736 61.111 34.60 0.00 44.35 5.69
2227 2691 1.291132 GAGCAGGCTAAATGGTCGAC 58.709 55.000 7.13 7.13 35.68 4.20
2230 2694 2.923121 TCATGAGCAGGCTAAATGGTC 58.077 47.619 13.44 0.00 43.73 4.02
2231 2695 3.117776 TGATCATGAGCAGGCTAAATGGT 60.118 43.478 10.16 8.58 0.00 3.55
2240 2704 3.252701 GCTTGGTATTGATCATGAGCAGG 59.747 47.826 14.16 11.89 0.00 4.85
2241 2705 3.881089 TGCTTGGTATTGATCATGAGCAG 59.119 43.478 14.16 1.76 34.33 4.24
2288 2752 1.866853 GCAGCTGTAGTTGTTGCCCC 61.867 60.000 16.64 0.00 35.99 5.80
2297 2761 3.923354 CACCTCTTGCAGCTGTAGT 57.077 52.632 16.64 1.74 0.00 2.73
2308 2772 1.228367 CAGCCACCAAGCACCTCTT 60.228 57.895 0.00 0.00 34.78 2.85
2320 2784 1.959042 ATGCATGTAGCTACAGCCAC 58.041 50.000 29.05 18.54 45.94 5.01
2321 2785 2.684374 CAAATGCATGTAGCTACAGCCA 59.316 45.455 29.05 25.88 45.94 4.75
2322 2786 2.542411 GCAAATGCATGTAGCTACAGCC 60.542 50.000 29.05 21.82 45.94 4.85
2323 2787 2.357009 AGCAAATGCATGTAGCTACAGC 59.643 45.455 29.05 28.10 45.94 4.40
2324 2788 3.376234 ACAGCAAATGCATGTAGCTACAG 59.624 43.478 29.05 21.28 45.94 2.74
2325 2789 3.346315 ACAGCAAATGCATGTAGCTACA 58.654 40.909 27.91 27.91 45.94 2.74
2326 2790 3.374988 TGACAGCAAATGCATGTAGCTAC 59.625 43.478 17.30 17.30 45.94 3.58
2327 2791 3.608796 TGACAGCAAATGCATGTAGCTA 58.391 40.909 17.18 0.00 45.94 3.32
2328 2792 2.439409 TGACAGCAAATGCATGTAGCT 58.561 42.857 13.24 13.24 45.94 3.32
2329 2793 2.925578 TGACAGCAAATGCATGTAGC 57.074 45.000 0.00 4.96 45.16 3.58
2330 2794 4.430137 ACTTGACAGCAAATGCATGTAG 57.570 40.909 0.00 7.06 45.16 2.74
2331 2795 5.240403 TGTTACTTGACAGCAAATGCATGTA 59.760 36.000 0.00 0.00 45.16 2.29
2332 2796 4.037803 TGTTACTTGACAGCAAATGCATGT 59.962 37.500 0.00 8.87 45.16 3.21
2333 2797 4.548494 TGTTACTTGACAGCAAATGCATG 58.452 39.130 0.00 5.84 45.16 4.06
2334 2798 4.852134 TGTTACTTGACAGCAAATGCAT 57.148 36.364 8.28 0.00 45.16 3.96
2335 2799 4.277921 TCATGTTACTTGACAGCAAATGCA 59.722 37.500 8.28 0.00 45.16 3.96
2336 2800 4.797471 TCATGTTACTTGACAGCAAATGC 58.203 39.130 0.00 0.00 42.49 3.56
2337 2801 9.016623 CATTATCATGTTACTTGACAGCAAATG 57.983 33.333 3.03 5.75 32.73 2.32
2338 2802 7.703621 GCATTATCATGTTACTTGACAGCAAAT 59.296 33.333 3.03 0.00 31.04 2.32
2339 2803 7.028962 GCATTATCATGTTACTTGACAGCAAA 58.971 34.615 3.03 0.00 31.04 3.68
2340 2804 6.375174 AGCATTATCATGTTACTTGACAGCAA 59.625 34.615 3.03 0.00 32.19 3.91
2341 2805 5.882000 AGCATTATCATGTTACTTGACAGCA 59.118 36.000 3.03 0.00 32.19 4.41
2342 2806 6.369059 AGCATTATCATGTTACTTGACAGC 57.631 37.500 3.03 5.75 32.19 4.40
2343 2807 7.977904 TCAAGCATTATCATGTTACTTGACAG 58.022 34.615 3.03 0.00 34.58 3.51
2344 2808 7.920160 TCAAGCATTATCATGTTACTTGACA 57.080 32.000 3.03 0.00 34.58 3.58
2345 2809 9.229784 CAATCAAGCATTATCATGTTACTTGAC 57.770 33.333 13.43 0.00 38.65 3.18
2346 2810 9.176460 TCAATCAAGCATTATCATGTTACTTGA 57.824 29.630 13.49 13.49 39.42 3.02
2347 2811 9.961265 ATCAATCAAGCATTATCATGTTACTTG 57.039 29.630 0.00 0.00 32.96 3.16
2379 2843 9.550406 CCATGTTTTTAGCAATATGATGGATTT 57.450 29.630 0.00 0.00 31.26 2.17
2380 2844 8.926374 TCCATGTTTTTAGCAATATGATGGATT 58.074 29.630 0.00 0.00 33.52 3.01
2381 2845 8.362639 GTCCATGTTTTTAGCAATATGATGGAT 58.637 33.333 0.00 0.00 39.14 3.41
2382 2846 7.341512 TGTCCATGTTTTTAGCAATATGATGGA 59.658 33.333 0.00 0.00 35.57 3.41
2383 2847 7.490840 TGTCCATGTTTTTAGCAATATGATGG 58.509 34.615 0.00 0.00 29.08 3.51
2384 2848 9.537192 AATGTCCATGTTTTTAGCAATATGATG 57.463 29.630 0.00 0.00 29.08 3.07
2386 2850 9.941325 AAAATGTCCATGTTTTTAGCAATATGA 57.059 25.926 0.00 0.00 29.08 2.15
2391 2855 9.770097 TCAATAAAATGTCCATGTTTTTAGCAA 57.230 25.926 0.00 0.00 30.75 3.91
2392 2856 9.421806 CTCAATAAAATGTCCATGTTTTTAGCA 57.578 29.630 0.00 0.00 30.75 3.49
2393 2857 8.872845 CCTCAATAAAATGTCCATGTTTTTAGC 58.127 33.333 0.00 0.00 30.75 3.09
2394 2858 9.369904 CCCTCAATAAAATGTCCATGTTTTTAG 57.630 33.333 0.00 0.00 30.75 1.85
2395 2859 8.875168 ACCCTCAATAAAATGTCCATGTTTTTA 58.125 29.630 0.00 0.00 31.52 1.52
2396 2860 7.744733 ACCCTCAATAAAATGTCCATGTTTTT 58.255 30.769 0.00 0.00 0.00 1.94
2397 2861 7.315066 ACCCTCAATAAAATGTCCATGTTTT 57.685 32.000 0.00 0.00 0.00 2.43
2398 2862 6.933514 ACCCTCAATAAAATGTCCATGTTT 57.066 33.333 0.00 0.00 0.00 2.83
2399 2863 6.725834 AGAACCCTCAATAAAATGTCCATGTT 59.274 34.615 0.00 0.00 0.00 2.71
2400 2864 6.256053 AGAACCCTCAATAAAATGTCCATGT 58.744 36.000 0.00 0.00 0.00 3.21
2401 2865 6.377996 TGAGAACCCTCAATAAAATGTCCATG 59.622 38.462 0.00 0.00 45.74 3.66
2402 2866 6.493166 TGAGAACCCTCAATAAAATGTCCAT 58.507 36.000 0.00 0.00 45.74 3.41
2403 2867 5.886609 TGAGAACCCTCAATAAAATGTCCA 58.113 37.500 0.00 0.00 45.74 4.02
2414 2878 9.480766 TTGTGAAGACAAGATGAGAACCCTCAA 62.481 40.741 0.00 0.00 43.37 3.02
2415 2879 8.099393 TTGTGAAGACAAGATGAGAACCCTCA 62.099 42.308 0.00 0.00 43.81 3.86
2416 2880 4.249661 GTGAAGACAAGATGAGAACCCTC 58.750 47.826 0.00 0.00 39.86 4.30
2417 2881 3.648067 TGTGAAGACAAGATGAGAACCCT 59.352 43.478 0.00 0.00 0.00 4.34
2418 2882 4.008074 TGTGAAGACAAGATGAGAACCC 57.992 45.455 0.00 0.00 0.00 4.11
2419 2883 5.702670 TCATTGTGAAGACAAGATGAGAACC 59.297 40.000 0.00 0.00 45.29 3.62
2420 2884 6.648310 TCTCATTGTGAAGACAAGATGAGAAC 59.352 38.462 14.49 0.00 45.29 3.01
2421 2885 6.762333 TCTCATTGTGAAGACAAGATGAGAA 58.238 36.000 14.49 4.14 45.29 2.87
2422 2886 6.350629 TCTCATTGTGAAGACAAGATGAGA 57.649 37.500 13.47 13.47 45.29 3.27
2423 2887 7.172875 ACTTTCTCATTGTGAAGACAAGATGAG 59.827 37.037 10.36 10.36 45.29 2.90
2424 2888 6.994496 ACTTTCTCATTGTGAAGACAAGATGA 59.006 34.615 1.85 0.00 45.29 2.92
2425 2889 7.199541 ACTTTCTCATTGTGAAGACAAGATG 57.800 36.000 1.85 0.00 45.29 2.90
2426 2890 7.500227 TGAACTTTCTCATTGTGAAGACAAGAT 59.500 33.333 1.85 0.00 45.29 2.40
2427 2891 6.823182 TGAACTTTCTCATTGTGAAGACAAGA 59.177 34.615 1.85 0.00 45.29 3.02
2428 2892 7.019774 TGAACTTTCTCATTGTGAAGACAAG 57.980 36.000 1.85 0.35 45.29 3.16
2429 2893 7.389803 TTGAACTTTCTCATTGTGAAGACAA 57.610 32.000 1.85 0.00 46.13 3.18
2430 2894 7.572523 ATTGAACTTTCTCATTGTGAAGACA 57.427 32.000 1.85 0.00 0.00 3.41
2431 2895 8.749499 CAAATTGAACTTTCTCATTGTGAAGAC 58.251 33.333 1.85 0.00 0.00 3.01
2432 2896 7.922278 CCAAATTGAACTTTCTCATTGTGAAGA 59.078 33.333 0.00 0.00 0.00 2.87
2433 2897 7.707893 ACCAAATTGAACTTTCTCATTGTGAAG 59.292 33.333 0.00 0.00 0.00 3.02
2434 2898 7.492020 CACCAAATTGAACTTTCTCATTGTGAA 59.508 33.333 0.00 0.00 0.00 3.18
2435 2899 6.979817 CACCAAATTGAACTTTCTCATTGTGA 59.020 34.615 0.00 0.00 0.00 3.58
2436 2900 6.292488 GCACCAAATTGAACTTTCTCATTGTG 60.292 38.462 0.00 0.00 0.00 3.33
2437 2901 5.754890 GCACCAAATTGAACTTTCTCATTGT 59.245 36.000 0.00 0.00 0.00 2.71
2438 2902 5.987347 AGCACCAAATTGAACTTTCTCATTG 59.013 36.000 0.00 0.00 0.00 2.82
2439 2903 6.041296 AGAGCACCAAATTGAACTTTCTCATT 59.959 34.615 0.00 0.00 0.00 2.57
2440 2904 5.537674 AGAGCACCAAATTGAACTTTCTCAT 59.462 36.000 0.00 0.00 0.00 2.90
2441 2905 4.889409 AGAGCACCAAATTGAACTTTCTCA 59.111 37.500 0.00 0.00 0.00 3.27
2442 2906 5.444663 AGAGCACCAAATTGAACTTTCTC 57.555 39.130 0.00 0.00 0.00 2.87
2443 2907 5.859205 AAGAGCACCAAATTGAACTTTCT 57.141 34.783 0.00 0.00 0.00 2.52
2444 2908 7.203218 ACTAAAGAGCACCAAATTGAACTTTC 58.797 34.615 0.00 0.00 31.14 2.62
2445 2909 7.112452 ACTAAAGAGCACCAAATTGAACTTT 57.888 32.000 0.00 0.00 32.38 2.66
2446 2910 6.715347 ACTAAAGAGCACCAAATTGAACTT 57.285 33.333 0.00 0.00 0.00 2.66
2447 2911 6.715347 AACTAAAGAGCACCAAATTGAACT 57.285 33.333 0.00 0.00 0.00 3.01
2448 2912 6.756542 ACAAACTAAAGAGCACCAAATTGAAC 59.243 34.615 0.00 0.00 0.00 3.18
2449 2913 6.872920 ACAAACTAAAGAGCACCAAATTGAA 58.127 32.000 0.00 0.00 0.00 2.69
2450 2914 6.463995 ACAAACTAAAGAGCACCAAATTGA 57.536 33.333 0.00 0.00 0.00 2.57
2451 2915 6.018832 CCAACAAACTAAAGAGCACCAAATTG 60.019 38.462 0.00 0.00 0.00 2.32
2452 2916 6.048509 CCAACAAACTAAAGAGCACCAAATT 58.951 36.000 0.00 0.00 0.00 1.82
2453 2917 5.362430 TCCAACAAACTAAAGAGCACCAAAT 59.638 36.000 0.00 0.00 0.00 2.32
2454 2918 4.707448 TCCAACAAACTAAAGAGCACCAAA 59.293 37.500 0.00 0.00 0.00 3.28
2455 2919 4.274147 TCCAACAAACTAAAGAGCACCAA 58.726 39.130 0.00 0.00 0.00 3.67
2456 2920 3.882888 CTCCAACAAACTAAAGAGCACCA 59.117 43.478 0.00 0.00 0.00 4.17
2457 2921 3.253432 CCTCCAACAAACTAAAGAGCACC 59.747 47.826 0.00 0.00 0.00 5.01
2458 2922 3.883489 ACCTCCAACAAACTAAAGAGCAC 59.117 43.478 0.00 0.00 0.00 4.40
2459 2923 4.134563 GACCTCCAACAAACTAAAGAGCA 58.865 43.478 0.00 0.00 0.00 4.26
2460 2924 3.502595 GGACCTCCAACAAACTAAAGAGC 59.497 47.826 0.00 0.00 35.64 4.09
2461 2925 4.714632 TGGACCTCCAACAAACTAAAGAG 58.285 43.478 0.00 0.00 44.35 2.85
2462 2926 4.445735 CCTGGACCTCCAACAAACTAAAGA 60.446 45.833 0.00 0.00 46.97 2.52
2463 2927 3.821033 CCTGGACCTCCAACAAACTAAAG 59.179 47.826 0.00 0.00 46.97 1.85
2464 2928 3.827722 CCTGGACCTCCAACAAACTAAA 58.172 45.455 0.00 0.00 46.97 1.85
2465 2929 2.488347 GCCTGGACCTCCAACAAACTAA 60.488 50.000 0.00 0.00 46.97 2.24
2466 2930 1.073284 GCCTGGACCTCCAACAAACTA 59.927 52.381 0.00 0.00 46.97 2.24
2467 2931 0.178990 GCCTGGACCTCCAACAAACT 60.179 55.000 0.00 0.00 46.97 2.66
2468 2932 1.179174 GGCCTGGACCTCCAACAAAC 61.179 60.000 0.00 0.00 46.97 2.93
2469 2933 1.152830 GGCCTGGACCTCCAACAAA 59.847 57.895 0.00 0.00 46.97 2.83
2470 2934 1.774217 AGGCCTGGACCTCCAACAA 60.774 57.895 3.11 0.00 46.97 2.83
2471 2935 2.121963 AGGCCTGGACCTCCAACA 60.122 61.111 3.11 0.00 46.97 3.33
2477 2941 4.787280 CCCTCGAGGCCTGGACCT 62.787 72.222 26.87 9.08 45.04 3.85
2478 2942 4.779733 TCCCTCGAGGCCTGGACC 62.780 72.222 26.87 0.00 34.51 4.46
2479 2943 1.627297 ATTTCCCTCGAGGCCTGGAC 61.627 60.000 26.87 0.00 34.51 4.02
2480 2944 0.914417 AATTTCCCTCGAGGCCTGGA 60.914 55.000 26.87 15.30 34.51 3.86
2481 2945 0.749454 CAATTTCCCTCGAGGCCTGG 60.749 60.000 26.87 10.16 34.51 4.45
2482 2946 0.035056 ACAATTTCCCTCGAGGCCTG 60.035 55.000 26.87 18.02 34.51 4.85
2483 2947 0.253327 GACAATTTCCCTCGAGGCCT 59.747 55.000 26.87 3.86 34.51 5.19
2484 2948 1.090052 CGACAATTTCCCTCGAGGCC 61.090 60.000 26.87 0.00 34.51 5.19
2485 2949 0.108329 TCGACAATTTCCCTCGAGGC 60.108 55.000 26.87 8.65 32.77 4.70
2486 2950 2.380084 TTCGACAATTTCCCTCGAGG 57.620 50.000 25.36 25.36 37.70 4.63
2487 2951 3.307242 GTCATTCGACAATTTCCCTCGAG 59.693 47.826 5.13 5.13 42.13 4.04
2488 2952 3.259064 GTCATTCGACAATTTCCCTCGA 58.741 45.455 0.00 0.00 42.13 4.04
2489 2953 3.658351 GTCATTCGACAATTTCCCTCG 57.342 47.619 0.00 0.00 42.13 4.63
2517 2981 9.391006 TGTTAACATGAAAACTAGTCAGAAGTT 57.609 29.630 3.59 0.62 38.82 2.66
2518 2982 8.958119 TGTTAACATGAAAACTAGTCAGAAGT 57.042 30.769 3.59 0.00 0.00 3.01
2528 2992 9.959749 AAACGATGTATTGTTAACATGAAAACT 57.040 25.926 9.56 0.00 37.69 2.66
2529 2993 9.987901 CAAACGATGTATTGTTAACATGAAAAC 57.012 29.630 9.56 3.79 37.69 2.43
2530 2994 9.952188 TCAAACGATGTATTGTTAACATGAAAA 57.048 25.926 9.56 0.00 37.69 2.29
2531 2995 9.605955 CTCAAACGATGTATTGTTAACATGAAA 57.394 29.630 9.56 0.00 37.69 2.69
2532 2996 7.748683 GCTCAAACGATGTATTGTTAACATGAA 59.251 33.333 9.56 0.00 37.69 2.57
2533 2997 7.095017 TGCTCAAACGATGTATTGTTAACATGA 60.095 33.333 9.56 5.20 37.69 3.07
2534 2998 7.020602 TGCTCAAACGATGTATTGTTAACATG 58.979 34.615 9.56 0.67 37.69 3.21
2535 2999 7.139896 TGCTCAAACGATGTATTGTTAACAT 57.860 32.000 9.56 2.67 40.23 2.71
2536 3000 6.546972 TGCTCAAACGATGTATTGTTAACA 57.453 33.333 3.59 3.59 33.37 2.41
2537 3001 8.995906 GTAATGCTCAAACGATGTATTGTTAAC 58.004 33.333 0.00 0.00 33.37 2.01
2538 3002 8.722394 TGTAATGCTCAAACGATGTATTGTTAA 58.278 29.630 0.00 0.00 33.37 2.01
2539 3003 8.257830 TGTAATGCTCAAACGATGTATTGTTA 57.742 30.769 0.00 0.00 33.37 2.41
2540 3004 7.139896 TGTAATGCTCAAACGATGTATTGTT 57.860 32.000 0.00 0.00 35.97 2.83
2541 3005 6.735678 TGTAATGCTCAAACGATGTATTGT 57.264 33.333 0.00 0.00 0.00 2.71
2542 3006 9.715123 TTATTGTAATGCTCAAACGATGTATTG 57.285 29.630 0.00 0.00 0.00 1.90
2568 3032 9.852091 GAAAGAAAGATGCAACTTGATCTATTT 57.148 29.630 10.27 4.43 0.00 1.40
2569 3033 9.240734 AGAAAGAAAGATGCAACTTGATCTATT 57.759 29.630 10.27 7.48 0.00 1.73
2570 3034 8.804912 AGAAAGAAAGATGCAACTTGATCTAT 57.195 30.769 10.27 0.00 0.00 1.98
2571 3035 8.627208 AAGAAAGAAAGATGCAACTTGATCTA 57.373 30.769 10.27 0.00 0.00 1.98
2572 3036 7.521871 AAGAAAGAAAGATGCAACTTGATCT 57.478 32.000 10.27 7.48 0.00 2.75
2573 3037 8.585189 AAAAGAAAGAAAGATGCAACTTGATC 57.415 30.769 10.27 5.22 0.00 2.92
2574 3038 8.823818 CAAAAAGAAAGAAAGATGCAACTTGAT 58.176 29.630 10.27 0.00 0.00 2.57
2575 3039 7.201548 GCAAAAAGAAAGAAAGATGCAACTTGA 60.202 33.333 10.27 0.00 33.00 3.02
2576 3040 6.903479 GCAAAAAGAAAGAAAGATGCAACTTG 59.097 34.615 10.27 0.00 33.00 3.16
2577 3041 6.237915 CGCAAAAAGAAAGAAAGATGCAACTT 60.238 34.615 2.94 2.94 33.00 2.66
2578 3042 5.232838 CGCAAAAAGAAAGAAAGATGCAACT 59.767 36.000 0.00 0.00 33.00 3.16
2579 3043 5.231991 TCGCAAAAAGAAAGAAAGATGCAAC 59.768 36.000 0.00 0.00 33.00 4.17
2580 3044 5.347342 TCGCAAAAAGAAAGAAAGATGCAA 58.653 33.333 0.00 0.00 33.00 4.08
2581 3045 4.930963 TCGCAAAAAGAAAGAAAGATGCA 58.069 34.783 0.00 0.00 33.00 3.96
2582 3046 5.231991 TGTTCGCAAAAAGAAAGAAAGATGC 59.768 36.000 0.00 0.00 0.00 3.91
2583 3047 6.810888 TGTTCGCAAAAAGAAAGAAAGATG 57.189 33.333 0.00 0.00 0.00 2.90
2584 3048 7.257722 TCTTGTTCGCAAAAAGAAAGAAAGAT 58.742 30.769 0.64 0.00 36.56 2.40
2585 3049 6.616947 TCTTGTTCGCAAAAAGAAAGAAAGA 58.383 32.000 0.64 0.00 36.56 2.52
2586 3050 6.869421 TCTTGTTCGCAAAAAGAAAGAAAG 57.131 33.333 0.64 0.00 36.56 2.62
2587 3051 7.032580 TGATCTTGTTCGCAAAAAGAAAGAAA 58.967 30.769 5.85 0.00 36.56 2.52
2588 3052 6.559810 TGATCTTGTTCGCAAAAAGAAAGAA 58.440 32.000 5.85 0.00 36.56 2.52
2589 3053 6.130298 TGATCTTGTTCGCAAAAAGAAAGA 57.870 33.333 5.85 0.00 36.56 2.52
2590 3054 6.473455 ACTTGATCTTGTTCGCAAAAAGAAAG 59.527 34.615 5.85 7.91 36.56 2.62
2591 3055 6.329496 ACTTGATCTTGTTCGCAAAAAGAAA 58.671 32.000 5.85 0.00 36.56 2.52
2592 3056 5.890334 ACTTGATCTTGTTCGCAAAAAGAA 58.110 33.333 5.85 0.00 36.56 2.52
2593 3057 5.499139 ACTTGATCTTGTTCGCAAAAAGA 57.501 34.783 0.00 4.61 36.56 2.52
2594 3058 5.555069 GCAACTTGATCTTGTTCGCAAAAAG 60.555 40.000 0.00 0.00 36.56 2.27
2595 3059 4.267452 GCAACTTGATCTTGTTCGCAAAAA 59.733 37.500 0.00 0.00 36.56 1.94
2596 3060 3.796178 GCAACTTGATCTTGTTCGCAAAA 59.204 39.130 0.00 0.00 36.56 2.44
2597 3061 3.181492 TGCAACTTGATCTTGTTCGCAAA 60.181 39.130 16.80 5.12 36.56 3.68
2598 3062 2.357323 TGCAACTTGATCTTGTTCGCAA 59.643 40.909 16.80 0.00 35.53 4.85
2599 3063 1.946081 TGCAACTTGATCTTGTTCGCA 59.054 42.857 15.99 15.99 0.00 5.10
2600 3064 2.686558 TGCAACTTGATCTTGTTCGC 57.313 45.000 0.00 6.58 0.00 4.70
2601 3065 4.675190 AGATGCAACTTGATCTTGTTCG 57.325 40.909 0.00 0.00 0.00 3.95
2602 3066 6.211515 ACAAAGATGCAACTTGATCTTGTTC 58.788 36.000 10.27 0.00 38.62 3.18
2603 3067 6.152932 ACAAAGATGCAACTTGATCTTGTT 57.847 33.333 10.27 0.00 38.62 2.83
2604 3068 5.278660 GGACAAAGATGCAACTTGATCTTGT 60.279 40.000 10.27 10.03 38.62 3.16
2605 3069 5.159209 GGACAAAGATGCAACTTGATCTTG 58.841 41.667 10.27 6.87 38.62 3.02
2606 3070 4.083110 CGGACAAAGATGCAACTTGATCTT 60.083 41.667 10.27 0.79 40.02 2.40
2607 3071 3.438087 CGGACAAAGATGCAACTTGATCT 59.562 43.478 10.27 0.00 0.00 2.75
2608 3072 3.436704 TCGGACAAAGATGCAACTTGATC 59.563 43.478 10.27 10.35 0.00 2.92
2609 3073 3.189287 GTCGGACAAAGATGCAACTTGAT 59.811 43.478 10.27 1.33 0.00 2.57
2610 3074 2.548057 GTCGGACAAAGATGCAACTTGA 59.452 45.455 10.27 0.00 0.00 3.02
2611 3075 2.350772 GGTCGGACAAAGATGCAACTTG 60.351 50.000 10.27 7.07 0.00 3.16
2612 3076 1.880027 GGTCGGACAAAGATGCAACTT 59.120 47.619 10.76 2.94 0.00 2.66
2613 3077 1.202758 TGGTCGGACAAAGATGCAACT 60.203 47.619 10.76 0.00 0.00 3.16
2614 3078 1.234821 TGGTCGGACAAAGATGCAAC 58.765 50.000 10.76 0.00 0.00 4.17
2615 3079 2.083774 GATGGTCGGACAAAGATGCAA 58.916 47.619 10.76 0.00 0.00 4.08
2616 3080 1.678728 GGATGGTCGGACAAAGATGCA 60.679 52.381 10.76 0.00 0.00 3.96
2617 3081 1.017387 GGATGGTCGGACAAAGATGC 58.983 55.000 10.76 0.00 0.00 3.91
2618 3082 2.401583 TGGATGGTCGGACAAAGATG 57.598 50.000 10.76 0.00 0.00 2.90
2619 3083 2.305927 ACTTGGATGGTCGGACAAAGAT 59.694 45.455 10.76 0.00 0.00 2.40
2620 3084 1.697432 ACTTGGATGGTCGGACAAAGA 59.303 47.619 10.76 0.00 0.00 2.52
2621 3085 1.806542 CACTTGGATGGTCGGACAAAG 59.193 52.381 10.76 7.62 0.00 2.77
2622 3086 1.418264 TCACTTGGATGGTCGGACAAA 59.582 47.619 10.76 0.00 0.00 2.83
2623 3087 1.052617 TCACTTGGATGGTCGGACAA 58.947 50.000 10.76 0.00 0.00 3.18
2624 3088 1.052617 TTCACTTGGATGGTCGGACA 58.947 50.000 10.76 0.00 0.00 4.02
2625 3089 2.403252 ATTCACTTGGATGGTCGGAC 57.597 50.000 0.00 0.00 0.00 4.79
2626 3090 3.009033 AGAAATTCACTTGGATGGTCGGA 59.991 43.478 0.00 0.00 0.00 4.55
2627 3091 3.347216 AGAAATTCACTTGGATGGTCGG 58.653 45.455 0.00 0.00 0.00 4.79
2628 3092 4.216257 ACAAGAAATTCACTTGGATGGTCG 59.784 41.667 21.17 3.48 45.92 4.79
2629 3093 5.712152 ACAAGAAATTCACTTGGATGGTC 57.288 39.130 21.17 0.00 45.92 4.02
2630 3094 6.068010 TGTACAAGAAATTCACTTGGATGGT 58.932 36.000 21.17 9.05 45.92 3.55
2631 3095 6.207417 ACTGTACAAGAAATTCACTTGGATGG 59.793 38.462 21.17 14.75 45.92 3.51
2632 3096 7.206981 ACTGTACAAGAAATTCACTTGGATG 57.793 36.000 21.17 15.02 45.92 3.51
2633 3097 7.823745 AACTGTACAAGAAATTCACTTGGAT 57.176 32.000 21.17 10.03 45.92 3.41
2634 3098 7.639113 AAACTGTACAAGAAATTCACTTGGA 57.361 32.000 21.17 14.55 45.92 3.53
2635 3099 7.435192 GGAAAACTGTACAAGAAATTCACTTGG 59.565 37.037 21.17 11.18 45.92 3.61
2636 3100 8.190784 AGGAAAACTGTACAAGAAATTCACTTG 58.809 33.333 17.83 17.83 46.69 3.16
2637 3101 8.190784 CAGGAAAACTGTACAAGAAATTCACTT 58.809 33.333 0.00 0.00 42.42 3.16
2638 3102 7.707104 CAGGAAAACTGTACAAGAAATTCACT 58.293 34.615 0.00 0.00 42.42 3.41
2639 3103 7.914537 CAGGAAAACTGTACAAGAAATTCAC 57.085 36.000 0.00 0.00 42.42 3.18
2665 3129 3.944055 ATTAGCGAGTGACACTGAAGT 57.056 42.857 14.14 0.00 0.00 3.01
2666 3130 3.369147 CCAATTAGCGAGTGACACTGAAG 59.631 47.826 14.14 5.43 0.00 3.02
2667 3131 3.325870 CCAATTAGCGAGTGACACTGAA 58.674 45.455 14.14 2.21 0.00 3.02
2668 3132 2.930887 GCCAATTAGCGAGTGACACTGA 60.931 50.000 14.14 0.00 0.00 3.41
2669 3133 1.394917 GCCAATTAGCGAGTGACACTG 59.605 52.381 14.14 6.75 0.00 3.66
2670 3134 1.726853 GCCAATTAGCGAGTGACACT 58.273 50.000 8.12 8.12 0.00 3.55
2680 3144 2.356135 TGAAAGTCCTCGCCAATTAGC 58.644 47.619 0.00 0.00 0.00 3.09
2681 3145 3.941483 ACATGAAAGTCCTCGCCAATTAG 59.059 43.478 0.00 0.00 0.00 1.73
2682 3146 3.689161 CACATGAAAGTCCTCGCCAATTA 59.311 43.478 0.00 0.00 0.00 1.40
2683 3147 2.489329 CACATGAAAGTCCTCGCCAATT 59.511 45.455 0.00 0.00 0.00 2.32
2684 3148 2.086869 CACATGAAAGTCCTCGCCAAT 58.913 47.619 0.00 0.00 0.00 3.16
2685 3149 1.522668 CACATGAAAGTCCTCGCCAA 58.477 50.000 0.00 0.00 0.00 4.52
2686 3150 0.955428 GCACATGAAAGTCCTCGCCA 60.955 55.000 0.00 0.00 0.00 5.69
2687 3151 0.674895 AGCACATGAAAGTCCTCGCC 60.675 55.000 0.00 0.00 0.00 5.54
2688 3152 0.723981 GAGCACATGAAAGTCCTCGC 59.276 55.000 0.00 0.00 0.00 5.03
2689 3153 2.084610 TGAGCACATGAAAGTCCTCG 57.915 50.000 0.00 0.00 0.00 4.63
2690 3154 3.128242 CCAATGAGCACATGAAAGTCCTC 59.872 47.826 0.00 0.00 36.79 3.71
2691 3155 3.087031 CCAATGAGCACATGAAAGTCCT 58.913 45.455 0.00 0.00 36.79 3.85
2692 3156 2.165030 CCCAATGAGCACATGAAAGTCC 59.835 50.000 0.00 0.00 36.79 3.85
2693 3157 2.821969 ACCCAATGAGCACATGAAAGTC 59.178 45.455 0.00 0.00 36.79 3.01
2694 3158 2.821969 GACCCAATGAGCACATGAAAGT 59.178 45.455 0.00 0.00 36.79 2.66
2695 3159 3.087031 AGACCCAATGAGCACATGAAAG 58.913 45.455 0.00 0.00 36.79 2.62
2696 3160 3.084039 GAGACCCAATGAGCACATGAAA 58.916 45.455 0.00 0.00 36.79 2.69
2697 3161 2.618816 GGAGACCCAATGAGCACATGAA 60.619 50.000 0.00 0.00 36.79 2.57
2698 3162 1.065199 GGAGACCCAATGAGCACATGA 60.065 52.381 0.00 0.00 36.79 3.07
2699 3163 1.064906 AGGAGACCCAATGAGCACATG 60.065 52.381 0.00 0.00 36.79 3.21
2700 3164 1.064906 CAGGAGACCCAATGAGCACAT 60.065 52.381 0.00 0.00 38.50 3.21
2701 3165 0.325933 CAGGAGACCCAATGAGCACA 59.674 55.000 0.00 0.00 33.88 4.57
2702 3166 0.326264 ACAGGAGACCCAATGAGCAC 59.674 55.000 0.00 0.00 33.88 4.40
2703 3167 1.067295 AACAGGAGACCCAATGAGCA 58.933 50.000 0.00 0.00 33.88 4.26
2704 3168 1.271597 ACAACAGGAGACCCAATGAGC 60.272 52.381 0.00 0.00 33.88 4.26
2705 3169 2.816087 CAACAACAGGAGACCCAATGAG 59.184 50.000 0.00 0.00 33.88 2.90
2706 3170 2.174639 ACAACAACAGGAGACCCAATGA 59.825 45.455 0.00 0.00 33.88 2.57
2707 3171 2.586425 ACAACAACAGGAGACCCAATG 58.414 47.619 0.00 0.00 33.88 2.82
2708 3172 3.312736 AACAACAACAGGAGACCCAAT 57.687 42.857 0.00 0.00 33.88 3.16
2709 3173 2.818751 AACAACAACAGGAGACCCAA 57.181 45.000 0.00 0.00 33.88 4.12
2710 3174 2.650322 GAAACAACAACAGGAGACCCA 58.350 47.619 0.00 0.00 33.88 4.51
2711 3175 1.954382 GGAAACAACAACAGGAGACCC 59.046 52.381 0.00 0.00 0.00 4.46
2712 3176 2.357952 GTGGAAACAACAACAGGAGACC 59.642 50.000 0.00 0.00 46.06 3.85
2713 3177 3.013921 TGTGGAAACAACAACAGGAGAC 58.986 45.455 0.00 0.00 46.06 3.36
2714 3178 3.278574 CTGTGGAAACAACAACAGGAGA 58.721 45.455 0.00 0.00 46.06 3.71
2715 3179 2.358898 CCTGTGGAAACAACAACAGGAG 59.641 50.000 14.86 0.00 45.38 3.69
2716 3180 2.374184 CCTGTGGAAACAACAACAGGA 58.626 47.619 14.86 0.00 45.38 3.86
2717 3181 1.202405 GCCTGTGGAAACAACAACAGG 60.202 52.381 15.47 15.47 46.06 4.00
2718 3182 1.750778 AGCCTGTGGAAACAACAACAG 59.249 47.619 0.00 0.00 46.06 3.16
2719 3183 1.846007 AGCCTGTGGAAACAACAACA 58.154 45.000 0.00 0.00 46.06 3.33
2720 3184 2.165437 TGAAGCCTGTGGAAACAACAAC 59.835 45.455 0.00 0.00 46.06 3.32
2721 3185 2.426738 CTGAAGCCTGTGGAAACAACAA 59.573 45.455 0.00 0.00 46.06 2.83
2722 3186 2.023673 CTGAAGCCTGTGGAAACAACA 58.976 47.619 0.00 0.00 46.06 3.33
2723 3187 2.024414 ACTGAAGCCTGTGGAAACAAC 58.976 47.619 0.00 0.00 46.06 3.32
2728 3192 1.214175 TGGAAACTGAAGCCTGTGGAA 59.786 47.619 0.00 0.00 0.00 3.53
2732 3196 0.183492 TGCTGGAAACTGAAGCCTGT 59.817 50.000 0.00 0.00 36.05 4.00
2752 3216 4.866508 AGACGGTCTGAACTACAATTCA 57.133 40.909 10.41 0.00 37.08 2.57
2779 3243 3.579066 GCGTCTGGATAGAGAAGCC 57.421 57.895 0.00 0.00 40.41 4.35
2788 3252 1.348008 ATGGACATGGGCGTCTGGAT 61.348 55.000 0.00 0.00 36.12 3.41
2789 3253 1.995066 ATGGACATGGGCGTCTGGA 60.995 57.895 0.00 0.00 36.12 3.86
2857 3321 1.629861 TGAACAGACATGATGGGCAGA 59.370 47.619 0.00 0.00 0.00 4.26
2887 3351 3.901797 CTGGCCGGGTTGAGGACAC 62.902 68.421 2.57 0.00 42.95 3.67
2888 3352 3.636231 CTGGCCGGGTTGAGGACA 61.636 66.667 2.57 0.00 46.24 4.02
2889 3353 3.319198 TCTGGCCGGGTTGAGGAC 61.319 66.667 12.87 0.00 37.28 3.85
2890 3354 3.319198 GTCTGGCCGGGTTGAGGA 61.319 66.667 12.87 0.00 0.00 3.71
2891 3355 3.316573 GAGTCTGGCCGGGTTGAGG 62.317 68.421 12.87 0.00 0.00 3.86
2892 3356 2.266055 GAGTCTGGCCGGGTTGAG 59.734 66.667 12.87 0.00 0.00 3.02
2893 3357 2.525629 TGAGTCTGGCCGGGTTGA 60.526 61.111 12.87 0.00 0.00 3.18
2894 3358 2.046892 CTGAGTCTGGCCGGGTTG 60.047 66.667 12.87 0.00 0.00 3.77
2895 3359 3.322466 CCTGAGTCTGGCCGGGTT 61.322 66.667 12.87 0.00 0.00 4.11
2898 3362 4.767255 GTGCCTGAGTCTGGCCGG 62.767 72.222 31.32 4.71 45.86 6.13
2899 3363 3.655810 GAGTGCCTGAGTCTGGCCG 62.656 68.421 31.32 3.36 45.86 6.13
2900 3364 2.116983 TTGAGTGCCTGAGTCTGGCC 62.117 60.000 31.32 23.45 45.86 5.36
2901 3365 0.673022 CTTGAGTGCCTGAGTCTGGC 60.673 60.000 28.93 28.93 46.46 4.85
2902 3366 0.673022 GCTTGAGTGCCTGAGTCTGG 60.673 60.000 11.59 11.59 0.00 3.86
2903 3367 2.838286 GCTTGAGTGCCTGAGTCTG 58.162 57.895 0.00 0.00 0.00 3.51
2912 3376 0.035630 ATCAGGTCAGGCTTGAGTGC 60.036 55.000 0.00 0.00 36.62 4.40
2913 3377 2.486472 AATCAGGTCAGGCTTGAGTG 57.514 50.000 0.00 0.00 36.62 3.51
2914 3378 4.640771 TTTAATCAGGTCAGGCTTGAGT 57.359 40.909 0.00 0.00 36.62 3.41
2915 3379 5.678107 GCAATTTAATCAGGTCAGGCTTGAG 60.678 44.000 0.00 0.00 36.62 3.02
2916 3380 4.158394 GCAATTTAATCAGGTCAGGCTTGA 59.842 41.667 0.00 0.00 37.60 3.02
2917 3381 4.159135 AGCAATTTAATCAGGTCAGGCTTG 59.841 41.667 0.00 0.00 0.00 4.01
2918 3382 4.159135 CAGCAATTTAATCAGGTCAGGCTT 59.841 41.667 0.00 0.00 0.00 4.35
2919 3383 3.698040 CAGCAATTTAATCAGGTCAGGCT 59.302 43.478 0.00 0.00 0.00 4.58
2920 3384 3.696051 TCAGCAATTTAATCAGGTCAGGC 59.304 43.478 0.00 0.00 0.00 4.85
2921 3385 5.416952 ACTTCAGCAATTTAATCAGGTCAGG 59.583 40.000 0.00 0.00 0.00 3.86
2922 3386 6.404074 GGACTTCAGCAATTTAATCAGGTCAG 60.404 42.308 0.00 0.00 0.00 3.51
2923 3387 5.415701 GGACTTCAGCAATTTAATCAGGTCA 59.584 40.000 0.00 0.00 0.00 4.02
2924 3388 5.415701 TGGACTTCAGCAATTTAATCAGGTC 59.584 40.000 0.00 0.00 0.00 3.85
2925 3389 5.324409 TGGACTTCAGCAATTTAATCAGGT 58.676 37.500 0.00 0.00 0.00 4.00
2926 3390 5.902613 TGGACTTCAGCAATTTAATCAGG 57.097 39.130 0.00 0.00 0.00 3.86
2927 3391 5.796935 CGTTGGACTTCAGCAATTTAATCAG 59.203 40.000 0.00 0.00 0.00 2.90
2928 3392 5.698832 CGTTGGACTTCAGCAATTTAATCA 58.301 37.500 0.00 0.00 0.00 2.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.