>input_sequence_64634
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------------------------------------------------------------------------ATGCACGA
GTGTGTAATCAACATCGGGACTGCCTTACCGAAATCCTTAAAGCATCTGACAATCAGAGATACAAGTTTTGGCTCTCAGG
ATT-CCCCCTGTCTTACTTCTGCGCCAGGTCTGGTTACCTTGGAAGTTGCTGACTGTCATGGTTGGACCCCGTTGTTTAA
GAGCTTGCCATCACTAGTTGCGGCATTTATAAACACCGAA----TATGTCTTGAAGGGTTCTTCCGGAAATAGTTTCAAT
GG----GTACTGTGGTCATGAGCAATGTGTGGTGTGCCATGGTATAGCTGAT---TTTGTGTTTCTTGAAGGTTTGTCGG
GCGCTACGAATTTAGAGTTGACAGCTGAATACTTTATGGTATGCTCACACTCTTTTCCAGTTCATTATATGCTTGCTG-T
TTTGCTAATGCCGTTTGTTGTTTTCTGTTCACCTTGGTATTATTAAATCTTACACTTGAAGTTAGAGCTTCAATTGTCCT
TTAATTCTTCAC--CTCGTCTAGATTTTCAGAACAGATATAGAATGGTG-CCCTATGTTTAGCAGGCTAAAAACATTGTT
GCTCAGTGACTGGTGTATGGCTCAGTACTTCCATGGACTAGTTTTCTTTCTCAAGCACTCACCGATTCTAGAGAGGCTTA
CCCTTGAACACTGTACTTTATCTAAGGTATGAATTTTTTTCTTCTTCTTCTTCTTCTATGTATGATAGATGCTTTGTCTT
TGAAATTGCCACGTACTGCTGGTTCATTTCAGTCAACTATTTTGTTTGCAACAGCAATGGTATGATACCACGACTGAAAC
CTACAAGCCAAAGGACAAATTCTTGGTATCAAAGCATCTCAAGGCAGTCGAAATCAATCATGTGAAAGGTGATAAAAGGA
TTCACCTATTATTGAAGGTCCTTGCTTTCCATGGAGTATATTCGGAACTAATAAACTTTAAAGAGAAGTATACTTCTTAA
--------------------------------------------------------------------------------
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-------------------------------------------------------
>chr5A_1_TraesCS5A01G347100
TGAGGTCAGCAACATCCAGTCAGTTCTTGTCGCCGTTTTATTCCTAGTTCGTGCAGCACATTAAGGCATGGATGTTTGCT
CTTCACCAGTTTA-----TATATACAAGGATGTCTAGGGCTGGTGAATGAATTCTGTCCCAAGTGAATT---CCGCACTT
CAGGTCAGTTTGATGGCTTTAATTTCTTGTATTTATTTATGTTTGTGCTCTCAGGCATTTGTCAGATTTCTGGGCA-TTT
CTGACAAGCCACATTCCAATGTTTGTCAACTGCTGCATACCATTCTACC-------------------------------
--------------------------------------------------------------------------------
----------------------TCTGATGTACACTTGTTTCTTTTTTCAAGGTGTCACATACTAAGAAATTCTCCTCCG-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------GAAGCAGCCAACAGAGGCACCTAAGTCGACGCGGGGCGAGTCATCGGGCAATTTTCCACCTTCCCTGCC
TCGTTTGGCTGCTCATTTGGTGTCCATCTCATTGGCAGCTTCGCGCCACCTGT-------TCGACGGAATGGCAGAGAGG
CTCTGCAGCAAGAAAGCGGCTGTGGCTGCTGGCGAGGA---CCGCTTAAGCACGCTGCCGGAAGATGTGATCCATCTCGT
GCTGTCGCTCCTGCCCTCGTGTCAAGCCGTGCGGACGTGCGTGCTCGCCACCCGCTGGCGCACCCTCTG------GAAGT
CCGTGCCGTCTCTTCGCGTGATCGCGTCGATGCCGATGATGAGGCC--TACCGGTG-TTGCCAGGACCTGAAGCGTTTCA
TCGATAGCTTTCTTCGCTGCCGTGACCCAACACCTCTGCACGAATGTGAGATCCTTTTTGACGATGATCGGCGCTC----
---------------GGAGGAGTTTCACCAAGACTTTGAGCTGTGGCTCCGTTATGCCGTGCCTCACAAAGTGAGGGTTC
TCCGATTTGAAATCCTAGCTGGTCATGATCCGTTGCAGCTATCTGCCGGGGCTCTCATCTCGGAGCATTTGACAACATTA
ATTCTTTGTTGCGTCGAGTTTGAGGATTTCTCTCTGGATGTTTCCGGCTGTCAGTCACTTGAGGTGCTGGAGATGCACGA
GTGTGTAATCAACATCGGGACTGCCTTACCGAAATCCTTAAAGCATCTGACAATCAGAGATACAAGTTTTGGCTCTCAGG
ATT-CCCCCTGTCTTACTTCTGCGCCAGGTCTGGTTACCTTGGAAGTTGCTGACTGTCATGGTTGGACCCCGTTGTTTAA
GAGCTTGCCATCACTAGTTGCGGCATTTATAAACACCGAA----TATGTCTTGAAGGGTTCTTCCGGAAATAGTTTCAAT
GG----GTACTGTGGTCATGAGCAATGTGTGGTGTGCCATGGTATAGCTGAT---TTTGTGTTTCTTGAAGGTTTGTCGG
GCGCTACGAATTTAGAGTTGACAGCTGAATACTTTATGGTATGCTCACACTCTTTTCCAGTTCATTATATGCTTGCTG-T
TTTGCTAATGCCGTTTGTTGTTTTCTGTTCACCTTGGTATTATTAAATCTTACACTTGAAGTTAGAGCTTCAATTGTCCT
TTAATTCTTCAC--CTCGTCTAGATTTTCAGAACAGATATAGAATGGTG-CCCTATGTTTAGCAGGCTAAAAACATTGTT
GCTCAGTGACTGGTGTATGGCTCAGTACTTCCATGGACTAGTTTTCTTTCTCAAGCACTCACCGATTCTAGAGAGGCTTA
CCCTTGAACACTGTACTTTATCTAAGGTATGAATTTTTTTCTTCTTCTTCTTCTTCTATGTATGATAGATGCTTTGTCTT
TGAAATTGCCACGTACTGCTGGTTCATTTCAGTCAACTATTTTGTTTGCAACAGCAATGGTATGATACCACGACTGAAAC
CTACAAGCCAAAGGACAAATTCTTGGTATCAAAGCATCTCAAGGCAGTCGAAATCAATCATGTGAAAGGTGATAAAAGGA
TTCACCTATTATTGAAGGTCCTTGCTTTCCATGGAGTATATTCGGAACTAATAAACTTTAAAGAGAAGTATACTTCTTAA
CGTAAGTGACTATAACCACATTTTACTGTTACAATGTTTATGTAGTCTGCATGTATGACATTA-----------TTATTT
TTCCAGTCAATTAAATCACAAAATAAAACTGAAA-TTGGAAACAACCATTGGGTGAGGTTAGAAATG--AAAAACGGAAG
ACCACCTAACTTATTTCAGTGAAA-TGTAAACCTAGGCCAAAGAAGAAGTGCATGCAACATGTTTACATCCTTTGGCTTG
TCAATGCCACTATGACACCACACACCTTTCATTCACAATGCCGCATCTTGGTCGACCATTTAGCCTGCTCATGATCAATA
CCAAGCATCAAACATGGTGATGCCATCTGCTGGGGCAACAACTACAGCTGCAAGAGGTGCTTGGTGGCTGTAGCTACATG
CATTTGCTGTCAAGTAACATGATAATGCTTGATTGATTATCAAAATCCATCATATTGCTAAAAACATGGACATTTTATTG
AGGGTTCTCATCTTGTCTTCACAATGAGAAAGTTCAATTTGGTGCTCTTTAGTTTGTTGGAGGTCCAGGCCTCGAGGGAA
ATTGTCGAATGACAAGTTAAAACTTCTGACTAGTTTTCATGTTAACAATACATCGTTTGAGCATTACAATAAAATAGATC
AAGTTGCATCTTTCTTTCTTTTTGCGAACAAGATCAAGTTGCATCTTTGTCCGACCATCCAAGTGAATTTCTTGTACAGT
TTTCCTGCACTTCAGTGTCACTCGCTAATTGGCGAGGACTTTCATGTGCTCATTGGGTCTCCTGTTGTTGTTTCCACAGG
CTTCAGTTTCCAGCATGAATTGTAGTTCAGACCGTCTACTATGGCTTCTCTATCCAGACGCCCATGTCCATGAATGATTC
ACCATAAGGTACTCTGCGTGTTGTCAGCTGAGATCGCGCGTCTGCCCATCATGTCTGTTCACATGAACTCGTGTCCTCAA
CCCGGCCAGACTCAGGCACTCAAGCCTGACCTGATTAAATTGCTGAAGTCCAACG
>chr5D_26
-------------------------CTTGTCTCCGTTTTGTT-CTAGTTAGTGCAGCACA-TAAGTCGTGGATGTTTGTT
CTTCAGTTTTCACCAGTTTATATACAAGGATGTCTAGGGCTGGGGAATGAATTCTGTC--AAGTGAATTCTACTACACTT
CAGGTCAGTTTGATGGCTTT-----CTTGTATTTATTTAGATTTGTGCTCTCAGGCATTTGTCAGATTTCTGGGCATC-T
TTGACAAGCCACATTCCAATGTTTGTCAACTGCTGCATACCATTCTACTCCCTCCGTTCCGAAATAGATGACTCAATTTT
GTACAAAGTTAGTACAAAGTTGCGAAATAGATGACTCAATTTTGTATAAAGTTAGTACAAAGTTGAGTCATCTATTTTGA
AACGGAGGGAGTACCTGTGAATTGTGATGTACA----TTTCTTTTTTGAAGGTGCCACATACTAAGAAATTCTGT-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------TCCAGAAGCAGCGAATAGAGGCACCTAAGTTGACGCGGGGCGAGTC--TGAGCAAATTTCCACCTTTCCTGCC
TGGTTTGGCTGCTCATTTGGTGTCCATCTCCTTGGCAGCTTCGCCGCGGGACGCCACCTGTTGACAGAATGGCTGAGAGG
TTCGGCAGCAAGAAAGCGGCTGTGGCTGGTGGCGAGGA---CCGCTTGAGCACGCTCCCAGAAGATGTGATCCGGCTGGT
GTTGTCGTTCCTGCCCTCGCGTCAAGCCATGCAGACGTGCGTGCTCGCCACCCGCTGGCGCACCCTCTG------GAAGT
CTGTGCCGTCTCTTGGC--------GTCGATGCCGATGATGAGGCCTATACCGGTG-TTGCCAGGACCTGAAGTGTTTCA
TCGATAGCTTCCTTCGCTGCCGTGACCCAACACCTCTGCACGAATGTGAGATCCTTTTTGACGACGATCGGGGCTC----
---------------GGAGCAGTTTCACCAAGACTTTGAGCTGTGGCTCTGTTATGCTGTGTCACACAAAGTGAGGGTTC
TCCGATTTGAAATCCTAGCTGGCCGTGATCCGTTGCAGCTATCTGCCGGGGCTCTCGTCTCGGAGCACTTGACAACATTA
ATTCTTCGTTGTGTAGAGTCTGAGGATTTCTCTCTGGATGTGTCGGGCTGTCAGTCACTTGAGGTGCTGGAGATGCACGA
GTGTGTAATCAACATCGGGACTGTCTTACCAAAATCCTTAAAACATCTGACAATCAGAGAT-------------------
--T-CCCCGTGCCTTACTTCTGCGCCAGGTCTGGTTACCTTGGAAGTTGCTGACTGTCATGGTTGGACTCCGTTGTTTAA
GAGCTTGCCATCACTAGTAGCGGCATTTATAAACACGAGA----TATGTCTTAAAGGGTTCTTGTGGAAATAGTCTCAAT
GGGTACGTACTGTGGTCATGAGCTATGTGTGGTATGCCATGGTAGAGCTGAT---TTTGTGTTTCTTGAAGGTTTGTCGG
GCGCTACGAATTTAGAGTTGACAGCTGAATACTTTATGGTATGCTTGCACTCTTTTCCAGTTG---ATACGTTTGCTG-T
TTTGCCAATGCCGTTTGTTGTTTTCTGTTCACCTTGGTATTATTCAATCTTACGCTTGAAGTGAGAGCTTCAATGGTCCT
TTAATTCTTCACCTCTCGTCTAGATTTTCAGAACAGATATAGAATGGTG-CCCTATGTTTAGCAGGCTAAAAACATTGTT
GCTCAGTGACTGGTGTATGGCTCATTACTTCCATGGACTAGTTTTCTTTCTCAAGCACTCACCGATTCTAGAGAGGCTTA
CCCTTGAACACTCTACTTTATCTAAGGTATGATTTTTCTTTA-------CTTCTTCTATGTATGAT----GCCTTGTCTT
TGAAATTGCCACGTACTGCTGATTCATTTCAGTCAATTATTTTGTTTGCAACAGCAATGGTATGGTGACACGACTGAAAC
CTGCAAGCCAAAGGACAAATTCTTGGTATCAAAACATCTCAAGGCAGTCGAAATCAATCATGTGAAAGATGATAAAAGGA
TTCACCTATTATTGAAGGTCCTTGCTTTCCATGGAGTATATTCGGAACTAATAAACTTTAAAGAGAAGTATACTTCTTAA
CGTAAGTAACTATAACCACATTTTACTGTTATAATGTTTATGTAGTCTGCATGTATGACATTAGGAGATTTTTATTATTA
TTCCAGTCAATTAAATCACAAAATAATACTGAAATTTGGAAACAGCCATTTGGTGAGGTTAG-AAATGAAAAACCGGAAG
ACCACCTAACTTATTTCAGTGAAGATGTAAACCTAGGCCAAAGGAGAAGCGCATGCAACATGTTTTCATCCTTTGGCTTG
TCAATGCCACTATGACACCATACACCTTTCATTCGTAATGTTGCATCTTGATCAGCCATTTAGTTTGCTCATGATCAATA
CCTAACAGTAAACATGGTGATTCCATCTGCTAGGGCAACAGCTACAGCTGCCAGAGGTGCTTGA----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------TTGTATCCGCAGG
CTTCAGTTTCCAGCACGAATTGTAGTTCAGACCGTCTACTATCGCTTCTCTTCCCAGACGCCCATGTCCATGAATGGTTC
ACCATAAGGTACTCTGCGTGTTGTCAGCTGAGATCGCGCGCCTGCCCGTCATGTGTGTTCACATGAA-------------
-------------------------------------------------------
>chr5B_26
-------------------------CTTGCCTCCGTTTTATTCCTAGTTAGCGCAGCACATTAAGGCGTGGATGTTTGTT
CTTCAGTTTTCACCAGCTTATATAGAAGGATGTCTAGGGCTGGGGAATGAGTTCTGT-CCAAGTGAATT---CTACACTT
CAGGTCAGTTTGATGGCTTT-----CATGTATTTATT----TTTGTGCTCTCTGGCATTTGCCAAATTTCTGGGCATTTT
TTGACAAGCCACATTCCAATGTTTGTCAACTGACGCATACCATTCTACC-------------------------------
--------------------------------------------------------------------------------
----------------------TGTGATGTACA----TTTCTTTTTTGAAGGTGTCACATACTAAGAAATTTGTTAGCTA
CCCTCTAGATATCTATGGATTAATGGTGGATGGAGTACAGGGGAGAGATTACAACTTGGGGAAGAAGAAGCAGCTAAGAA
GAAATGGAGATACAAGCCGCCGCCGTTCAGTTCCTGATCCTAGCCGGGATGGCTGCTCGTTCTGTTATCCCGTGTAGTGA
AGCATGGTGGGCTGGGCTTTCATCTATCGCTGGGCCTTCGTCTGTCGCTGGGCCGCACAATGGAAAGGGTCGCTAACAAA
ATTCCCCTCCAGAAGCAGCGAACAGAGGCACCTAAGTTGGCGCGGGGCGAATCTTTGGGCAATTTTCCACCTTTCCTGCC
TGGTTTGGCTGCTCATTTGGTGTCCATCTCCTTGGCAGCTTCG--------CGCCACCTGTTGACAGAATGGCCGAGAGG
TACTGCAGCAAGAAAGCGGTTGTGGCTGGTGGCGAGAA---CCGCTTAAGCACGCTCCCAGAAGATGTGATCCAGCCGGT
GTTGTCGTTCCTGCCCTCGCGTCGAGCCGCGCAGACGTGCGCGCTCGCCACCCGCTGGCGCACCCTCTGCCTCTGGAAGT
CTGTGCCATCTCTTCGC--------ATCGATGCCGATGATGAGGCC--TACCGGTG-TTGCCACGACTTGAAGCGTTTCA
TCGATGGCTTCCTTCGCTGCCGTGACCCAACACCTCTGCACGAATGTGAGATCCTTTTTGACGATGATCGGGGCTC----
---------------GGAGCAGTTTCACCCAGACTTTGAGCTGTGGCTCTATTATGCTGTGTCACACAAAGTGAGGGTTC
TTCGATTCAAAATCCTAGCTGGCCATGATCCTTTGCAGCTATCTGCCGGGGCTCTCATCTCCGACCACTTGACAACATTA
GTTCTTCGTTGTGTCGAGTTCTAGGATTTCTCTCTGGATATGTCGGGCTGTCAGTCACTTGAGGTGCTGGAGATGCACGA
GTGTGTAATCAACATTGGGACCGTCTTACCAAAATCCTTAAAACATCTGACAATCAGAGATACAAGTTTTGGCTCTCAGG
ATT-CCCGGTGTCTTACTTCTGCGCTAGGTCTGGTTACCTTGGAAGTTGCTGGCTGTCATGGTTGGACTCCGTTGTTTAA
GAGCTTGCCATCACTAGTAGCGGCATTTATAAACACCAGATACGTATGTCTTAAAGGGTTCTTGTGGACATAGTTTCAAT
GG----GTACTGTGGTCATGAGCTATGTGTGGTGTGCCATGGTAGAGCTGAT---TTTGTGTTTCTTGAAGGCTTGTCGG
GCGCTACGAATTTAGAGTTGACAGCTGAATACTTTATGGTATGCGTGCACTCCTTTCCAGTTG---ATACGCTTGCTG-T
TTTGCTAATGCCGTTTGTTGTTTTCTGTTCACCTTGGTATTATCAAATCTTACACTTGAAGTTAGAGCTTCAATTGCCCT
TTAATTCTTCACCTCTCGTCTAGATTTTCAGAACAGATATAGAATGGTGCCCCTATGTTTAGCAGGCTAAAAACATTGTT
GCTCAGTGACTGGTGTATGGCTAATTACTTATGTGGACTAGTTTTCTTTCTCAAGCACTCACCGGTTCTAGAG--GCTTA
CCCTTGAACACTGTACTTTATCTAAGGTATGATTTTTTG---------TCTTCTTCTATGTATGAT----GCCTTGTCTT
TGAAATTGCCACGTGCTGCTGATTCATTTCAGTCAACTATTTTGCTTGCAACAGCAATGGTATGGTAA-ACGACTGAAAC
CTGCAAGCCAAAGGACAAACTCTTGGTATCAAAACATCTCGAGGCAGTCGAAATCAATCATGTGAAAGCTGGTAAAAGGA
TTCACCTATTATTGAAGGTCCTTGCTTTCCAT------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------TTGGTGAGGTTAG-AATG--AAAAATGGAAG
ACCACCTAACTTATTTCAGTGAAAATGT----------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------
>chr5A_452
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---------------------------------------------CCACCTGT-------TCGACGGAATGGCCGAGAGG
ATGTGCAGCAAGGAAGCCGCTGTGGCTGGCGGCGATGAGGACCGGCTAAGCACGCTGCCGGACGAATTGATCCAGCTGGT
GCTGTCATTCCTGCCCTCGCGCCAGGCCGTGCAGACGTGCGTGCTCGCCACCCGCTGGCGCACCCTCTG------GAAGT
CCGTGCCGGCCATTCGC--------CTCGACGCCTATGCTGGGACC--TACCAGTT-TGGGCAGGACCTGAGCCATTTCG
TCCATAGTCTTCTCCGATACCGTGACCCAACTCCTCTGCGTGAATGTGAGATCCTTTTTAATGGCGATCATCGCCATGAT
TGCTATGACCTACGAGGAGGAGATTCAGCAAGACTTTGAGCTGTGGCTCCGTTATGCTGTGTCATGCAAAGCGAGGGTTA
TTCGACTCGAAAT---GACTGTTTATCGTCCTTTGAGGATATTTCCTGGGACTCTCATCTCCCAGCACTTGACAAGGTTA
ATTCTTCATCGTGTCCAGTTTGAGGATTTCTCTCTTGATGTTTTGGGCTGTCAGTTACTGGAGGTGTTGGACATTCAAGA
CTGTATAATCGACATTGAGACTGTTTTCCCAAAATCTCTACAACATCTGGCGATCAGAGATACAGGTC-TTTTCCCAATG
GAAACCCGGTGTGTTATATCTGCGCCAGGTCTGGTTTTCTTGGAACTATACGACTGTTTGGGTTGGACTCCGTTGCTTGA
GAGCCTGCCATCATTGGTAACGGCATTTATCAACACTGGACCCTACTGCAGAGATAA----TTGTAGAAATAGTTCTAAC
G----CGGACTGTGGTCTCGAGTCATGTGTGGAGTGCTATGGTATAGATGAT---TGTGTGCTTCTCCAAGGTTTATCAG
CCGCTACAAATTTAGAGCTGATAACCTGCAAGTCTATGGTATGCT-----------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------
>chr5B_452
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------CCACCTGT-------TCGACGGAATGGCCGAGAGG
CTCTGCAGCAAGCAAGCCGATGTGGCTGAGAGCGAGGA---CCGCCTAAGCACGCTGCCGGACAAATTGATCCAGCTGGT
GCTGTCGTTCCTGCCCTCGCGCCAGGCCGTGCAGACGTGCGTGCTCGCCACCCGCTGGCGCACCCTCTG------GAAGT
CCGTGCCGGCCATTCGC--------CTCGACGCCTACGCTGGGACC--TACCAGTT-TGGGCAGGACTTGAGCCATTTTG
TTCACAGCCTTCTCCAATACCGCGACCCAACTCCTCTGCGTGAATGTGAGATCCTTTTTCGTGATGATCA---CCATGAT
TG-------CGACGAGGAGGAGATTCAGCAATACTTTGAGCTGTGGCTCCGTTATGCTGTGTCATGCAAAGCGAGGGTTC
TTCGATTTGAAAT---AGCCATGTATCGTCCTTTGAGGATACTTGCTGGAACTCTCATCTCTCAGCACTTGACAAGCTTA
ATTCTTTATTGTGTCCAGTTTGAGGATTTCTCTCTTGATGTTTTGGGCTGTCAGTTACTGGAGGTGTTGGACATTCAAGA
CTGTATAATCAACATCCGGACTGTTTTCCTAAAATCTCTACAACATATGACGATGAGAGATACAGGTGTTTTTCCCAATG
GAAACCTGGTTTGTTATTTCTGCACCAGGTCTGGTTATCTTGGAACTAGACGACTGTGTGGGTTGGACTCCGTTGCTTGA
GAGTCTGCCATCATTGGTAACGGCATTTATCAACGCTGGACCCTACTGCAGAGATAA----TTGTAGAAATAGTTCTAAC
G----GGGACTGTGGTCTTGAGTCATGTGTGGAGTGCTATGGTATAGATGAT---TGTGTGCTTCTCCAAGGTTTATCAG
GCGCTACGAATTTAGAGCTGATAACCCAAAAGTCTATGGTATGCT-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------
>chr5D_454
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------ACCTGT-------TCGACGGAATGACCGAGAGG
CTGTGCAGCAAGAAAGCGTCTGTGGCTAGCGGCGATGAGGACCGCC----CACGCTGCCGGACGAACTGATCCAGCTGGT
GCTGTCATTCCTGCCCTCGCGCCAGGTCGTGCAGACGTGCGTGCTCGCCACCCGCTGGCGCACGCTCTG------GAAGT
CCGTGCCGGCCATTCGC--------CTCGACGCCTAAGCTGGGACC--TACCAGTT-TGGGCAGGACCTGAGCCATTTTG
TCCATAGCCTTCTCCGATA------------------GCGTGAATGTGAGATCCTTTTTAATGGCGATCATCGCCATGAT
TG-------CTACGAGGAGGAGATTCAGCAAGACTTTGAGCTGTGGCTCCGTTATGCTGTGTCATGCAAAGCGAGGGTTA
TTCGACTTGAAAT---AACTGTTTATCGTCCTTTGAGGATATTTCCTGGGACTCTTATCTCCCAGCACTTGACAAGGTTA
ATTCTTTATCGTGTCCAGTTTGAGGATTTCTCTCTTGATGTTTTGGGCTGTCAGTTACTGGAGGTGTTGGACATTCAAGA
CTGTATAATCGACATTGAGACTGTTTTCCCAAAATCTCTAAAACATCTGGCGATCAGAGATACAGGTC-TTTTCCCAATG
GAAACCCGGTGTGTTATTTCTGCGCCAGGTCTGGTTATCTTGGAACTATACGACTGTGTGGGTTGGACTCCGTTGCTTGA
GAGCCTGCCATCATTGGTAACGGCATTTATCAACACTGGACCCTACTGCGGAGATAA----TTGTAGAAATAGTTCTAAC
G----GGGACTGTGGTCTCGAGTCCTGTGTGGAGTGCTATGGTATAGATGAT---TGTGTGCTTCTCCAAGGTTTATCAG
GCGCTACGAATTTAGAGCTGA-----------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------
>chr3B_456
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------CTGC-------TCGACAGAATGGCCAAGAGG
CTGTCCAACGAGGAAGCAGCTGTGGCTGGCTGCGAGGA---CCGCCTAAGCACGCTCCCGGAAGATGTAATCCTGCGGCT
GCTATCGTTCCTGCCCTCACGGCAAGCCGTGCGGACGTGCGTGCTCGCCACCCGCTGGCGCACGCTCTG------GAAGT
CTGTGCCGGCCCTTCGT--------ATCGATGAAACTGAGAGTGAGACCTATGGGACTGGCGATGACCTGAACCATTTTA
TCAATAGCCTTCTTCGCAAC--CGACCAAGCACCTCTCCATGAATGTGAGTTCCTTATATACCATGGCTTCGGTACCA--
-----------------AGGAGTCTCCCCAAGACTTTGAGTTGTGGCTCCGTTATGCCATATCGTGCAAAGTGAGGGTTC
TCCGGTTTGAAATCTTATCTCGTGATGATTATTTGACGACATCAGCTGGGACTCTCATCTCCCAGCACTTGACGAGGTTA
TTTCTTTATTTTGTTGGGGTTGAGGATTTCTCTCTAGATGTTTTGAGCTGTCAGTCACTTGAAGTGTTAGAGATGGAACT
ATGTATAATCAGCATCCGGACTATCTTCCCAAAATCGTTACGCCATCTGAGAATCAGACTTACAGATGTTTATCCCAA-G
GATACCCGGCCTCTTATTTCTGCACCAGGTCTGATTACCTTGGAGCTAGCCAACTGTACGTATTGGACTCCGTTGCCTAA
GAACCTGCCATCATTGGTAACGGCATTTATCAACATTGGC----TCTGGCGGCATGGAATCTTGTCAAAATAGTTTGAGT
G----GGGACTGTGGTTATGTGTCGTGTGAGAAGTGCTATGGTATGGATGACGAGTGTGTGTTTCTCGAAGGTTTGTCGG
GTGCAACAAATTTACAGCTGATAAGTCCGTGCTCTATGGTATGCTTACACATTTGTTTTGTGG---ATATGCTTGCTATT
TTTGCTAATTCCTTTTGTTGTTTGCTATTTACCATTG-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSS------S-----------------S-----------------S----------S-
-----SSSS-SSS------------------------------S-----------------------------SS-----
--------------------SSSSS--------------SS---------------------------------------
S-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------S---------SSSS----------S-------------------------SSSS-S-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------S-----------------S---------------S-S-----------------S------
-S----------------------------S-------------S----------------------------S------
----------------------------S---------------------------------------------S--S--
-------S-----------S------------------------------------------------------------
-----------------SSSSSSSS-------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------S-S----------------
-------------------------------------------------------------------S------------
-----------S--------------------------------S-----------------------------------
-----------------------S------S-----------S-------------------------------------
--------S-----------------------------------------------------------S-----------
------------------S-------------------S------------------------SS---------------
-----------------------S--------------------------------------------------------
---------------------------------------------S----------------SSSS--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------S-------------------------------------------------------
--------------------------------S-------SSSSSSSS------------------SSSS--S-------
---------------------S------------------------------------------S--S------------
--S------------------------------S----------------------------------S-----------
--------------------------------------------------------------------------------
-------S-----------------------S-----------------------------------------------S
--------------------------S-----------------S-----S-----------S-----------------
-------------------------------------------S-----S---------------S--------------
--------------------S-------------SS----SS--------S--SS--------SS---------------
--S-S--SS------------S---------S--------S----------S-----------SSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----S---S----
---------------S--------------------------S--------SS-----------------------S---
----------------------------------------S------S------S------------SSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_802
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------TTTTCCACCTTCCCTGCC
TC------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------
>reverse_2676
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------CAATGCCGCATCTTGGTCG--------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------
