Multiple sequence alignment - TraesCS5A01G310700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G310700 chr5A 100.000 2988 0 0 1 2988 522424183 522427170 0.000000e+00 5518.0
1 TraesCS5A01G310700 chr5A 86.593 634 80 4 1083 1712 522104273 522104905 0.000000e+00 695.0
2 TraesCS5A01G310700 chr5A 92.053 453 36 0 1035 1487 522082719 522083171 3.250000e-179 638.0
3 TraesCS5A01G310700 chr5A 91.026 468 39 2 1020 1487 522223694 522224158 1.950000e-176 628.0
4 TraesCS5A01G310700 chr5A 92.239 335 19 6 1 333 608422765 608422436 4.510000e-128 468.0
5 TraesCS5A01G310700 chr5A 83.146 267 30 10 1530 1794 522083361 522083614 2.320000e-56 230.0
6 TraesCS5A01G310700 chr5D 94.177 1786 91 3 1209 2988 410679449 410681227 0.000000e+00 2710.0
7 TraesCS5A01G310700 chr5D 84.478 728 99 10 1083 1800 410539182 410539905 0.000000e+00 706.0
8 TraesCS5A01G310700 chr5D 90.749 454 42 0 1022 1475 410620296 410620749 9.160000e-170 606.0
9 TraesCS5A01G310700 chr5D 90.583 446 39 1 1035 1477 410490787 410491232 3.320000e-164 588.0
10 TraesCS5A01G310700 chr5D 90.395 354 21 3 484 836 410677209 410677550 1.260000e-123 453.0
11 TraesCS5A01G310700 chr5D 86.216 370 39 8 1101 1469 411170962 411170604 1.000000e-104 390.0
12 TraesCS5A01G310700 chr5D 81.366 322 48 8 2607 2928 226966814 226967123 4.940000e-63 252.0
13 TraesCS5A01G310700 chr5D 77.511 458 76 20 1453 1900 84788199 84788639 1.780000e-62 250.0
14 TraesCS5A01G310700 chr5D 89.894 188 19 0 1508 1695 410620941 410621128 2.980000e-60 243.0
15 TraesCS5A01G310700 chr5D 86.099 223 24 3 1530 1752 410491429 410491644 1.790000e-57 233.0
16 TraesCS5A01G310700 chr5D 83.529 255 29 8 1118 1364 411845876 411845627 3.000000e-55 226.0
17 TraesCS5A01G310700 chr5B 93.006 1387 82 10 609 1982 493140096 493141480 0.000000e+00 2010.0
18 TraesCS5A01G310700 chr5B 92.584 445 33 0 1033 1477 492782475 492782919 9.030000e-180 640.0
19 TraesCS5A01G310700 chr5B 89.633 463 45 2 1025 1487 493086750 493086291 1.190000e-163 586.0
20 TraesCS5A01G310700 chr5B 81.411 581 79 23 1100 1667 493160040 493159476 5.880000e-122 448.0
21 TraesCS5A01G310700 chr5B 79.907 428 55 20 1530 1951 492783119 492783521 4.870000e-73 285.0
22 TraesCS5A01G310700 chr5B 89.286 112 11 1 330 440 320736745 320736634 4.020000e-29 139.0
23 TraesCS5A01G310700 chr1B 90.618 1407 73 23 504 1868 562434432 562433043 0.000000e+00 1812.0
24 TraesCS5A01G310700 chr3A 93.313 329 18 2 4 332 547400603 547400927 1.610000e-132 483.0
25 TraesCS5A01G310700 chr3A 83.242 364 56 4 2616 2978 422029340 422028981 2.220000e-86 329.0
26 TraesCS5A01G310700 chr7D 91.793 329 23 3 10 336 576160204 576160530 3.510000e-124 455.0
27 TraesCS5A01G310700 chr7D 81.641 256 42 3 1110 1364 27468163 27467912 1.090000e-49 207.0
28 TraesCS5A01G310700 chr7D 83.696 92 13 1 2662 2753 613915068 613914979 5.310000e-13 86.1
29 TraesCS5A01G310700 chr6D 91.317 334 25 3 4 335 433294138 433293807 1.260000e-123 453.0
30 TraesCS5A01G310700 chr6D 82.812 320 44 7 2662 2978 464420985 464420674 2.930000e-70 276.0
31 TraesCS5A01G310700 chr6D 89.815 108 10 1 333 439 124360129 124360022 1.440000e-28 137.0
32 TraesCS5A01G310700 chr6D 88.496 113 11 2 330 440 62035440 62035552 5.200000e-28 135.0
33 TraesCS5A01G310700 chr6D 88.288 111 13 0 330 440 176235669 176235779 1.870000e-27 134.0
34 TraesCS5A01G310700 chr6D 88.889 108 12 0 333 440 264834811 264834704 1.870000e-27 134.0
35 TraesCS5A01G310700 chr2D 91.541 331 23 4 4 333 586776185 586776511 4.540000e-123 451.0
36 TraesCS5A01G310700 chr2D 83.196 363 55 5 2621 2980 369701824 369702183 7.990000e-86 327.0
37 TraesCS5A01G310700 chr2D 83.660 306 43 4 2662 2966 6159401 6159700 6.310000e-72 281.0
38 TraesCS5A01G310700 chr2D 82.581 310 47 5 2621 2929 321933750 321934053 1.770000e-67 267.0
39 TraesCS5A01G310700 chr2D 80.000 280 37 13 1089 1363 7228089 7227824 3.930000e-44 189.0
40 TraesCS5A01G310700 chr1A 91.291 333 25 4 4 336 454530505 454530177 4.540000e-123 451.0
41 TraesCS5A01G310700 chr1A 91.265 332 23 5 4 334 367439337 367439663 5.880000e-122 448.0
42 TraesCS5A01G310700 chr1A 75.439 456 85 19 1455 1900 347062527 347062965 2.350000e-46 196.0
43 TraesCS5A01G310700 chr4D 91.463 328 25 2 4 331 439177568 439177244 5.880000e-122 448.0
44 TraesCS5A01G310700 chr4D 91.463 328 24 3 4 330 476862477 476862153 5.880000e-122 448.0
45 TraesCS5A01G310700 chr4D 89.286 112 11 1 330 440 245275211 245275100 4.020000e-29 139.0
46 TraesCS5A01G310700 chr4D 89.286 112 11 1 330 440 347854019 347854130 4.020000e-29 139.0
47 TraesCS5A01G310700 chr2A 83.702 362 55 2 2621 2980 500713308 500713667 3.690000e-89 339.0
48 TraesCS5A01G310700 chr2B 84.639 332 49 1 2649 2980 439359494 439359823 2.220000e-86 329.0
49 TraesCS5A01G310700 chr3D 85.761 309 40 4 2628 2934 311635714 311635408 1.030000e-84 324.0
50 TraesCS5A01G310700 chr3D 88.496 113 11 1 330 440 460977154 460977042 5.200000e-28 135.0
51 TraesCS5A01G310700 chr4B 81.188 303 45 8 2662 2963 557572628 557572919 1.790000e-57 233.0
52 TraesCS5A01G310700 chr7B 83.544 237 39 0 1432 1668 624549207 624548971 3.880000e-54 222.0
53 TraesCS5A01G310700 chr6A 83.200 250 33 7 2663 2910 11172110 11171868 1.390000e-53 220.0
54 TraesCS5A01G310700 chr6A 81.200 250 38 6 1432 1676 526171314 526171559 3.040000e-45 193.0
55 TraesCS5A01G310700 chr4A 90.090 111 11 0 330 440 185651887 185651777 8.630000e-31 145.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G310700 chr5A 522424183 522427170 2987 False 5518.0 5518 100.0000 1 2988 1 chr5A.!!$F3 2987
1 TraesCS5A01G310700 chr5A 522104273 522104905 632 False 695.0 695 86.5930 1083 1712 1 chr5A.!!$F1 629
2 TraesCS5A01G310700 chr5A 522082719 522083614 895 False 434.0 638 87.5995 1035 1794 2 chr5A.!!$F4 759
3 TraesCS5A01G310700 chr5D 410677209 410681227 4018 False 1581.5 2710 92.2860 484 2988 2 chr5D.!!$F6 2504
4 TraesCS5A01G310700 chr5D 410539182 410539905 723 False 706.0 706 84.4780 1083 1800 1 chr5D.!!$F3 717
5 TraesCS5A01G310700 chr5D 410620296 410621128 832 False 424.5 606 90.3215 1022 1695 2 chr5D.!!$F5 673
6 TraesCS5A01G310700 chr5D 410490787 410491644 857 False 410.5 588 88.3410 1035 1752 2 chr5D.!!$F4 717
7 TraesCS5A01G310700 chr5B 493140096 493141480 1384 False 2010.0 2010 93.0060 609 1982 1 chr5B.!!$F1 1373
8 TraesCS5A01G310700 chr5B 492782475 492783521 1046 False 462.5 640 86.2455 1033 1951 2 chr5B.!!$F2 918
9 TraesCS5A01G310700 chr5B 493159476 493160040 564 True 448.0 448 81.4110 1100 1667 1 chr5B.!!$R3 567
10 TraesCS5A01G310700 chr1B 562433043 562434432 1389 True 1812.0 1812 90.6180 504 1868 1 chr1B.!!$R1 1364

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
318 319 0.035439 ACGAAATGGGTCGCCTCATT 60.035 50.0 0.0 0.0 45.0 2.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2290 4076 0.322098 TCGGCGTTCAACATTGGGAT 60.322 50.0 6.85 0.0 0.0 3.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 3.515286 TCGAGGTCGATGGCGTCC 61.515 66.667 0.14 0.00 44.22 4.79
31 32 3.458163 GGTCGATGGCGTCCTCCA 61.458 66.667 0.14 0.00 41.54 3.86
33 34 1.144057 GTCGATGGCGTCCTCCATT 59.856 57.895 0.14 0.00 46.29 3.16
34 35 1.143838 TCGATGGCGTCCTCCATTG 59.856 57.895 0.14 4.09 46.29 2.82
35 36 2.537560 CGATGGCGTCCTCCATTGC 61.538 63.158 0.14 0.00 46.29 3.56
36 37 1.153086 GATGGCGTCCTCCATTGCT 60.153 57.895 0.00 0.00 46.29 3.91
37 38 1.442526 GATGGCGTCCTCCATTGCTG 61.443 60.000 0.00 0.00 46.29 4.41
38 39 2.825836 GGCGTCCTCCATTGCTGG 60.826 66.667 0.00 0.00 44.64 4.85
39 40 2.045926 GCGTCCTCCATTGCTGGT 60.046 61.111 0.00 0.00 43.61 4.00
40 41 1.675641 GCGTCCTCCATTGCTGGTT 60.676 57.895 0.00 0.00 43.61 3.67
41 42 1.244019 GCGTCCTCCATTGCTGGTTT 61.244 55.000 0.00 0.00 43.61 3.27
42 43 0.523072 CGTCCTCCATTGCTGGTTTG 59.477 55.000 0.00 0.00 43.61 2.93
43 44 0.890683 GTCCTCCATTGCTGGTTTGG 59.109 55.000 0.00 0.00 43.61 3.28
44 45 0.251742 TCCTCCATTGCTGGTTTGGG 60.252 55.000 0.00 0.00 43.61 4.12
45 46 1.259840 CCTCCATTGCTGGTTTGGGG 61.260 60.000 0.00 0.00 43.61 4.96
46 47 1.229145 TCCATTGCTGGTTTGGGGG 60.229 57.895 0.00 0.00 43.61 5.40
47 48 2.664398 CATTGCTGGTTTGGGGGC 59.336 61.111 0.00 0.00 0.00 5.80
48 49 2.996734 ATTGCTGGTTTGGGGGCG 60.997 61.111 0.00 0.00 0.00 6.13
75 76 2.032681 GCTCTGGCGGGAGTGTTT 59.967 61.111 8.64 0.00 35.89 2.83
76 77 1.600916 GCTCTGGCGGGAGTGTTTT 60.601 57.895 8.64 0.00 35.89 2.43
77 78 1.172812 GCTCTGGCGGGAGTGTTTTT 61.173 55.000 8.64 0.00 35.89 1.94
78 79 0.593128 CTCTGGCGGGAGTGTTTTTG 59.407 55.000 0.00 0.00 0.00 2.44
79 80 0.821711 TCTGGCGGGAGTGTTTTTGG 60.822 55.000 0.00 0.00 0.00 3.28
80 81 1.805428 CTGGCGGGAGTGTTTTTGGG 61.805 60.000 0.00 0.00 0.00 4.12
81 82 1.529713 GGCGGGAGTGTTTTTGGGA 60.530 57.895 0.00 0.00 0.00 4.37
82 83 1.110518 GGCGGGAGTGTTTTTGGGAA 61.111 55.000 0.00 0.00 0.00 3.97
83 84 0.747852 GCGGGAGTGTTTTTGGGAAA 59.252 50.000 0.00 0.00 0.00 3.13
84 85 1.137282 GCGGGAGTGTTTTTGGGAAAA 59.863 47.619 0.00 0.00 32.53 2.29
85 86 2.224185 GCGGGAGTGTTTTTGGGAAAAT 60.224 45.455 0.00 0.00 37.12 1.82
86 87 3.389221 CGGGAGTGTTTTTGGGAAAATG 58.611 45.455 0.00 0.00 37.12 2.32
87 88 3.738982 GGGAGTGTTTTTGGGAAAATGG 58.261 45.455 0.00 0.00 37.12 3.16
88 89 3.495983 GGGAGTGTTTTTGGGAAAATGGG 60.496 47.826 0.00 0.00 37.12 4.00
89 90 3.495983 GGAGTGTTTTTGGGAAAATGGGG 60.496 47.826 0.00 0.00 37.12 4.96
90 91 2.441375 AGTGTTTTTGGGAAAATGGGGG 59.559 45.455 0.00 0.00 37.12 5.40
91 92 2.439880 GTGTTTTTGGGAAAATGGGGGA 59.560 45.455 0.00 0.00 37.12 4.81
92 93 3.117851 GTGTTTTTGGGAAAATGGGGGAA 60.118 43.478 0.00 0.00 37.12 3.97
93 94 3.527665 TGTTTTTGGGAAAATGGGGGAAA 59.472 39.130 0.00 0.00 37.12 3.13
94 95 4.017499 TGTTTTTGGGAAAATGGGGGAAAA 60.017 37.500 0.00 0.00 37.12 2.29
95 96 5.144100 GTTTTTGGGAAAATGGGGGAAAAT 58.856 37.500 0.00 0.00 37.12 1.82
96 97 4.379302 TTTGGGAAAATGGGGGAAAATG 57.621 40.909 0.00 0.00 0.00 2.32
97 98 2.273619 TGGGAAAATGGGGGAAAATGG 58.726 47.619 0.00 0.00 0.00 3.16
98 99 2.274542 GGGAAAATGGGGGAAAATGGT 58.725 47.619 0.00 0.00 0.00 3.55
99 100 2.647299 GGGAAAATGGGGGAAAATGGTT 59.353 45.455 0.00 0.00 0.00 3.67
100 101 3.561097 GGGAAAATGGGGGAAAATGGTTG 60.561 47.826 0.00 0.00 0.00 3.77
101 102 3.073798 GGAAAATGGGGGAAAATGGTTGT 59.926 43.478 0.00 0.00 0.00 3.32
102 103 3.786368 AAATGGGGGAAAATGGTTGTG 57.214 42.857 0.00 0.00 0.00 3.33
103 104 1.655372 ATGGGGGAAAATGGTTGTGG 58.345 50.000 0.00 0.00 0.00 4.17
104 105 1.124477 TGGGGGAAAATGGTTGTGGC 61.124 55.000 0.00 0.00 0.00 5.01
105 106 0.835971 GGGGGAAAATGGTTGTGGCT 60.836 55.000 0.00 0.00 0.00 4.75
106 107 0.321346 GGGGAAAATGGTTGTGGCTG 59.679 55.000 0.00 0.00 0.00 4.85
107 108 0.321346 GGGAAAATGGTTGTGGCTGG 59.679 55.000 0.00 0.00 0.00 4.85
108 109 0.320683 GGAAAATGGTTGTGGCTGGC 60.321 55.000 0.00 0.00 0.00 4.85
109 110 0.392336 GAAAATGGTTGTGGCTGGCA 59.608 50.000 0.00 0.00 0.00 4.92
110 111 0.106521 AAAATGGTTGTGGCTGGCAC 59.893 50.000 25.55 25.55 0.00 5.01
111 112 1.757423 AAATGGTTGTGGCTGGCACC 61.757 55.000 28.40 15.90 0.00 5.01
113 114 4.947147 GGTTGTGGCTGGCACCGA 62.947 66.667 28.40 16.07 0.00 4.69
114 115 3.660111 GTTGTGGCTGGCACCGAC 61.660 66.667 28.40 22.40 0.00 4.79
115 116 4.182433 TTGTGGCTGGCACCGACA 62.182 61.111 28.40 9.83 0.00 4.35
116 117 4.624364 TGTGGCTGGCACCGACAG 62.624 66.667 28.40 0.00 42.51 3.51
137 138 4.153330 GGCCCGGGGAGAGGAGTA 62.153 72.222 25.28 0.00 0.00 2.59
138 139 2.522193 GCCCGGGGAGAGGAGTAG 60.522 72.222 25.28 0.00 0.00 2.57
139 140 2.198980 CCCGGGGAGAGGAGTAGG 59.801 72.222 14.71 0.00 0.00 3.18
140 141 2.522193 CCGGGGAGAGGAGTAGGC 60.522 72.222 0.00 0.00 0.00 3.93
141 142 2.907917 CGGGGAGAGGAGTAGGCG 60.908 72.222 0.00 0.00 0.00 5.52
142 143 3.228017 GGGGAGAGGAGTAGGCGC 61.228 72.222 0.00 0.00 0.00 6.53
143 144 3.597728 GGGAGAGGAGTAGGCGCG 61.598 72.222 0.00 0.00 0.00 6.86
144 145 4.273257 GGAGAGGAGTAGGCGCGC 62.273 72.222 25.94 25.94 0.00 6.86
145 146 4.615834 GAGAGGAGTAGGCGCGCG 62.616 72.222 28.44 28.44 0.00 6.86
168 169 4.773117 GTCCGTCTCGTGTCCGCC 62.773 72.222 0.00 0.00 0.00 6.13
171 172 4.778415 CGTCTCGTGTCCGCCCTG 62.778 72.222 0.00 0.00 0.00 4.45
172 173 3.371063 GTCTCGTGTCCGCCCTGA 61.371 66.667 0.00 0.00 0.00 3.86
173 174 3.371063 TCTCGTGTCCGCCCTGAC 61.371 66.667 0.00 0.00 35.77 3.51
174 175 4.778415 CTCGTGTCCGCCCTGACG 62.778 72.222 0.00 0.00 38.11 4.35
177 178 4.980805 GTGTCCGCCCTGACGCAA 62.981 66.667 0.00 0.00 43.55 4.85
178 179 4.243008 TGTCCGCCCTGACGCAAA 62.243 61.111 0.00 0.00 38.11 3.68
179 180 2.746277 GTCCGCCCTGACGCAAAT 60.746 61.111 0.00 0.00 0.00 2.32
180 181 2.435938 TCCGCCCTGACGCAAATC 60.436 61.111 0.00 0.00 0.00 2.17
181 182 3.508840 CCGCCCTGACGCAAATCC 61.509 66.667 0.00 0.00 0.00 3.01
182 183 3.864686 CGCCCTGACGCAAATCCG 61.865 66.667 0.00 0.00 0.00 4.18
183 184 3.508840 GCCCTGACGCAAATCCGG 61.509 66.667 0.00 0.00 0.00 5.14
184 185 3.508840 CCCTGACGCAAATCCGGC 61.509 66.667 0.00 0.00 36.59 6.13
185 186 2.436646 CCTGACGCAAATCCGGCT 60.437 61.111 0.00 0.00 37.10 5.52
186 187 2.464459 CCTGACGCAAATCCGGCTC 61.464 63.158 0.00 0.00 37.10 4.70
187 188 1.741401 CTGACGCAAATCCGGCTCA 60.741 57.895 0.00 0.00 37.10 4.26
188 189 1.298157 CTGACGCAAATCCGGCTCAA 61.298 55.000 0.00 0.00 37.10 3.02
189 190 0.886938 TGACGCAAATCCGGCTCAAA 60.887 50.000 0.00 0.00 37.10 2.69
190 191 0.239879 GACGCAAATCCGGCTCAAAA 59.760 50.000 0.00 0.00 32.31 2.44
191 192 0.671251 ACGCAAATCCGGCTCAAAAA 59.329 45.000 0.00 0.00 0.00 1.94
192 193 1.272212 ACGCAAATCCGGCTCAAAAAT 59.728 42.857 0.00 0.00 0.00 1.82
193 194 1.655099 CGCAAATCCGGCTCAAAAATG 59.345 47.619 0.00 0.00 0.00 2.32
194 195 2.001872 GCAAATCCGGCTCAAAAATGG 58.998 47.619 0.00 0.00 0.00 3.16
195 196 2.620242 CAAATCCGGCTCAAAAATGGG 58.380 47.619 0.00 0.00 0.00 4.00
196 197 0.536724 AATCCGGCTCAAAAATGGGC 59.463 50.000 0.00 0.00 0.00 5.36
197 198 1.329913 ATCCGGCTCAAAAATGGGCC 61.330 55.000 9.70 9.70 41.02 5.80
198 199 1.984026 CCGGCTCAAAAATGGGCCT 60.984 57.895 17.01 0.00 42.13 5.19
199 200 1.216178 CGGCTCAAAAATGGGCCTG 59.784 57.895 17.01 7.51 42.13 4.85
200 201 1.598517 GGCTCAAAAATGGGCCTGG 59.401 57.895 12.42 0.00 41.20 4.45
201 202 0.904394 GGCTCAAAAATGGGCCTGGA 60.904 55.000 12.42 0.00 41.20 3.86
202 203 0.975887 GCTCAAAAATGGGCCTGGAA 59.024 50.000 4.53 0.00 0.00 3.53
203 204 1.556451 GCTCAAAAATGGGCCTGGAAT 59.444 47.619 4.53 0.00 0.00 3.01
204 205 2.678769 GCTCAAAAATGGGCCTGGAATG 60.679 50.000 4.53 0.00 0.00 2.67
205 206 1.907936 TCAAAAATGGGCCTGGAATGG 59.092 47.619 4.53 0.00 0.00 3.16
206 207 1.065272 CAAAAATGGGCCTGGAATGGG 60.065 52.381 4.53 0.00 0.00 4.00
207 208 0.118952 AAAATGGGCCTGGAATGGGT 59.881 50.000 4.53 0.00 0.00 4.51
208 209 0.325577 AAATGGGCCTGGAATGGGTC 60.326 55.000 4.53 0.00 0.00 4.46
209 210 2.572333 AATGGGCCTGGAATGGGTCG 62.572 60.000 4.53 0.00 0.00 4.79
223 224 3.039588 GTCGCCCGCAGACGAAAA 61.040 61.111 0.00 0.00 43.93 2.29
224 225 2.280254 TCGCCCGCAGACGAAAAA 60.280 55.556 0.00 0.00 43.93 1.94
225 226 2.127383 CGCCCGCAGACGAAAAAC 60.127 61.111 0.00 0.00 43.93 2.43
230 231 3.904233 CGCAGACGAAAAACGGGCG 62.904 63.158 0.00 0.00 46.78 6.13
255 256 4.676586 GTTTGGGTCGGCGCGTTG 62.677 66.667 8.43 0.00 0.00 4.10
268 269 3.601685 CGTTGGGCCGCCACTTTT 61.602 61.111 12.58 0.00 0.00 2.27
269 270 2.028925 GTTGGGCCGCCACTTTTG 59.971 61.111 12.58 0.00 0.00 2.44
270 271 2.443016 TTGGGCCGCCACTTTTGT 60.443 55.556 12.58 0.00 0.00 2.83
271 272 2.494530 TTGGGCCGCCACTTTTGTC 61.495 57.895 12.58 0.00 0.00 3.18
272 273 3.680786 GGGCCGCCACTTTTGTCC 61.681 66.667 12.58 0.00 0.00 4.02
273 274 4.038080 GGCCGCCACTTTTGTCCG 62.038 66.667 3.91 0.00 0.00 4.79
274 275 4.700365 GCCGCCACTTTTGTCCGC 62.700 66.667 0.00 0.00 0.00 5.54
275 276 4.383602 CCGCCACTTTTGTCCGCG 62.384 66.667 0.00 0.00 43.69 6.46
276 277 3.645975 CGCCACTTTTGTCCGCGT 61.646 61.111 4.92 0.00 40.96 6.01
277 278 2.251371 GCCACTTTTGTCCGCGTC 59.749 61.111 4.92 0.00 0.00 5.19
278 279 2.549282 CCACTTTTGTCCGCGTCG 59.451 61.111 4.92 0.00 0.00 5.12
279 280 1.952133 CCACTTTTGTCCGCGTCGA 60.952 57.895 4.92 0.00 0.00 4.20
280 281 1.200839 CACTTTTGTCCGCGTCGAC 59.799 57.895 5.18 5.18 0.00 4.20
281 282 1.952635 ACTTTTGTCCGCGTCGACC 60.953 57.895 10.58 1.77 31.35 4.79
282 283 2.662527 TTTTGTCCGCGTCGACCC 60.663 61.111 10.58 0.00 31.35 4.46
283 284 3.442512 TTTTGTCCGCGTCGACCCA 62.443 57.895 10.58 0.00 31.35 4.51
284 285 2.919960 TTTTGTCCGCGTCGACCCAA 62.920 55.000 10.58 2.82 31.35 4.12
285 286 2.919960 TTTGTCCGCGTCGACCCAAA 62.920 55.000 10.58 8.61 31.35 3.28
286 287 3.408851 GTCCGCGTCGACCCAAAC 61.409 66.667 10.58 0.00 0.00 2.93
287 288 3.914117 TCCGCGTCGACCCAAACA 61.914 61.111 10.58 0.00 0.00 2.83
288 289 3.411351 CCGCGTCGACCCAAACAG 61.411 66.667 10.58 0.00 0.00 3.16
289 290 2.355363 CGCGTCGACCCAAACAGA 60.355 61.111 10.58 0.00 0.00 3.41
290 291 2.654912 CGCGTCGACCCAAACAGAC 61.655 63.158 10.58 0.00 0.00 3.51
292 293 4.744316 GTCGACCCAAACAGACGT 57.256 55.556 3.51 0.00 0.00 4.34
293 294 2.222592 GTCGACCCAAACAGACGTG 58.777 57.895 3.51 0.00 0.00 4.49
294 295 1.068417 TCGACCCAAACAGACGTGG 59.932 57.895 0.00 0.00 34.44 4.94
298 299 3.353836 CCAAACAGACGTGGGCGG 61.354 66.667 0.00 0.00 43.45 6.13
299 300 2.280524 CAAACAGACGTGGGCGGA 60.281 61.111 0.00 0.00 43.45 5.54
300 301 2.280592 AAACAGACGTGGGCGGAC 60.281 61.111 0.00 0.00 43.45 4.79
301 302 4.657824 AACAGACGTGGGCGGACG 62.658 66.667 0.00 6.18 45.09 4.79
303 304 4.351938 CAGACGTGGGCGGACGAA 62.352 66.667 13.77 0.00 42.10 3.85
304 305 3.608662 AGACGTGGGCGGACGAAA 61.609 61.111 13.77 0.00 42.10 3.46
305 306 2.433664 GACGTGGGCGGACGAAAT 60.434 61.111 13.77 0.00 42.10 2.17
306 307 2.736682 GACGTGGGCGGACGAAATG 61.737 63.158 13.77 0.00 42.10 2.32
307 308 3.496131 CGTGGGCGGACGAAATGG 61.496 66.667 1.76 0.00 42.10 3.16
308 309 3.131478 GTGGGCGGACGAAATGGG 61.131 66.667 0.00 0.00 0.00 4.00
309 310 3.642503 TGGGCGGACGAAATGGGT 61.643 61.111 0.00 0.00 0.00 4.51
310 311 2.822701 GGGCGGACGAAATGGGTC 60.823 66.667 0.00 0.00 0.00 4.46
311 312 3.192922 GGCGGACGAAATGGGTCG 61.193 66.667 0.00 0.00 46.54 4.79
312 313 3.861263 GCGGACGAAATGGGTCGC 61.861 66.667 0.00 0.00 45.00 5.19
313 314 3.192922 CGGACGAAATGGGTCGCC 61.193 66.667 0.00 0.00 45.00 5.54
314 315 2.267961 GGACGAAATGGGTCGCCT 59.732 61.111 0.00 0.00 45.00 5.52
315 316 1.814169 GGACGAAATGGGTCGCCTC 60.814 63.158 0.00 0.00 45.00 4.70
316 317 1.079405 GACGAAATGGGTCGCCTCA 60.079 57.895 0.00 0.00 45.00 3.86
317 318 0.462047 GACGAAATGGGTCGCCTCAT 60.462 55.000 0.00 0.00 45.00 2.90
318 319 0.035439 ACGAAATGGGTCGCCTCATT 60.035 50.000 0.00 0.00 45.00 2.57
319 320 0.378257 CGAAATGGGTCGCCTCATTG 59.622 55.000 0.00 0.00 34.28 2.82
320 321 1.750193 GAAATGGGTCGCCTCATTGA 58.250 50.000 0.00 0.00 34.28 2.57
321 322 2.091541 GAAATGGGTCGCCTCATTGAA 58.908 47.619 0.00 0.00 34.28 2.69
322 323 1.755179 AATGGGTCGCCTCATTGAAG 58.245 50.000 0.00 0.00 32.96 3.02
323 324 0.620556 ATGGGTCGCCTCATTGAAGT 59.379 50.000 0.00 0.00 0.00 3.01
324 325 0.400213 TGGGTCGCCTCATTGAAGTT 59.600 50.000 0.00 0.00 0.00 2.66
325 326 0.804989 GGGTCGCCTCATTGAAGTTG 59.195 55.000 0.00 0.00 0.00 3.16
326 327 0.169009 GGTCGCCTCATTGAAGTTGC 59.831 55.000 0.00 0.00 0.00 4.17
327 328 1.160137 GTCGCCTCATTGAAGTTGCT 58.840 50.000 0.00 0.00 0.00 3.91
328 329 1.129437 GTCGCCTCATTGAAGTTGCTC 59.871 52.381 0.00 0.00 0.00 4.26
329 330 1.002430 TCGCCTCATTGAAGTTGCTCT 59.998 47.619 0.00 0.00 0.00 4.09
330 331 1.808945 CGCCTCATTGAAGTTGCTCTT 59.191 47.619 0.00 0.00 39.32 2.85
331 332 3.002791 CGCCTCATTGAAGTTGCTCTTA 58.997 45.455 0.00 0.00 36.40 2.10
332 333 3.624861 CGCCTCATTGAAGTTGCTCTTAT 59.375 43.478 0.00 0.00 36.40 1.73
333 334 4.260538 CGCCTCATTGAAGTTGCTCTTATC 60.261 45.833 0.00 0.00 36.40 1.75
334 335 4.637534 GCCTCATTGAAGTTGCTCTTATCA 59.362 41.667 0.00 0.00 36.40 2.15
335 336 5.298777 GCCTCATTGAAGTTGCTCTTATCAT 59.701 40.000 0.00 0.00 36.40 2.45
336 337 6.484643 GCCTCATTGAAGTTGCTCTTATCATA 59.515 38.462 0.00 0.00 36.40 2.15
337 338 7.307870 GCCTCATTGAAGTTGCTCTTATCATAG 60.308 40.741 0.00 0.00 36.40 2.23
338 339 7.930325 CCTCATTGAAGTTGCTCTTATCATAGA 59.070 37.037 0.00 0.00 36.40 1.98
339 340 9.491675 CTCATTGAAGTTGCTCTTATCATAGAT 57.508 33.333 0.00 0.00 36.40 1.98
340 341 9.842775 TCATTGAAGTTGCTCTTATCATAGATT 57.157 29.630 0.00 0.00 36.40 2.40
341 342 9.880064 CATTGAAGTTGCTCTTATCATAGATTG 57.120 33.333 0.00 0.00 36.40 2.67
342 343 7.488187 TGAAGTTGCTCTTATCATAGATTGC 57.512 36.000 0.00 0.00 36.40 3.56
343 344 7.278135 TGAAGTTGCTCTTATCATAGATTGCT 58.722 34.615 0.00 0.00 36.40 3.91
344 345 7.772292 TGAAGTTGCTCTTATCATAGATTGCTT 59.228 33.333 0.00 0.00 36.40 3.91
345 346 8.517062 AAGTTGCTCTTATCATAGATTGCTTT 57.483 30.769 0.00 0.00 34.23 3.51
346 347 8.152309 AGTTGCTCTTATCATAGATTGCTTTC 57.848 34.615 0.00 0.00 0.00 2.62
347 348 7.992033 AGTTGCTCTTATCATAGATTGCTTTCT 59.008 33.333 0.00 0.00 0.00 2.52
348 349 9.265901 GTTGCTCTTATCATAGATTGCTTTCTA 57.734 33.333 0.00 0.00 32.94 2.10
350 351 9.650539 TGCTCTTATCATAGATTGCTTTCTATC 57.349 33.333 6.15 0.00 36.92 2.08
351 352 9.097257 GCTCTTATCATAGATTGCTTTCTATCC 57.903 37.037 6.15 0.00 36.92 2.59
352 353 9.299963 CTCTTATCATAGATTGCTTTCTATCCG 57.700 37.037 6.15 0.00 36.92 4.18
353 354 8.807118 TCTTATCATAGATTGCTTTCTATCCGT 58.193 33.333 6.15 0.75 36.92 4.69
354 355 8.988064 TTATCATAGATTGCTTTCTATCCGTC 57.012 34.615 6.15 0.00 36.92 4.79
355 356 6.405278 TCATAGATTGCTTTCTATCCGTCA 57.595 37.500 6.15 0.00 36.92 4.35
356 357 6.450545 TCATAGATTGCTTTCTATCCGTCAG 58.549 40.000 6.15 0.00 36.92 3.51
357 358 6.265422 TCATAGATTGCTTTCTATCCGTCAGA 59.735 38.462 6.15 0.00 36.92 3.27
358 359 5.543507 AGATTGCTTTCTATCCGTCAGAT 57.456 39.130 0.00 0.00 39.15 2.90
359 360 6.656632 AGATTGCTTTCTATCCGTCAGATA 57.343 37.500 0.00 0.00 36.33 1.98
360 361 7.238486 AGATTGCTTTCTATCCGTCAGATAT 57.762 36.000 0.00 0.00 36.84 1.63
361 362 8.354711 AGATTGCTTTCTATCCGTCAGATATA 57.645 34.615 0.00 0.00 36.84 0.86
362 363 8.465999 AGATTGCTTTCTATCCGTCAGATATAG 58.534 37.037 0.00 0.00 36.84 1.31
363 364 7.761038 TTGCTTTCTATCCGTCAGATATAGA 57.239 36.000 0.00 0.00 36.84 1.98
364 365 7.946381 TGCTTTCTATCCGTCAGATATAGAT 57.054 36.000 0.00 0.00 36.84 1.98
365 366 7.990917 TGCTTTCTATCCGTCAGATATAGATC 58.009 38.462 0.00 0.00 36.84 2.75
366 367 7.129622 GCTTTCTATCCGTCAGATATAGATCG 58.870 42.308 0.00 0.00 36.84 3.69
367 368 7.011576 GCTTTCTATCCGTCAGATATAGATCGA 59.988 40.741 0.00 0.00 36.84 3.59
368 369 8.788325 TTTCTATCCGTCAGATATAGATCGAA 57.212 34.615 0.00 0.00 36.84 3.71
369 370 8.426881 TTCTATCCGTCAGATATAGATCGAAG 57.573 38.462 0.00 0.00 36.84 3.79
370 371 6.987404 TCTATCCGTCAGATATAGATCGAAGG 59.013 42.308 13.60 13.60 36.84 3.46
371 372 4.262617 TCCGTCAGATATAGATCGAAGGG 58.737 47.826 17.03 12.51 36.22 3.95
372 373 4.011023 CCGTCAGATATAGATCGAAGGGT 58.989 47.826 12.62 0.00 37.15 4.34
373 374 5.046087 TCCGTCAGATATAGATCGAAGGGTA 60.046 44.000 17.03 4.27 36.22 3.69
374 375 5.823570 CCGTCAGATATAGATCGAAGGGTAT 59.176 44.000 12.62 0.00 37.15 2.73
375 376 6.990939 CCGTCAGATATAGATCGAAGGGTATA 59.009 42.308 12.62 0.00 37.15 1.47
376 377 7.662258 CCGTCAGATATAGATCGAAGGGTATAT 59.338 40.741 12.62 0.00 37.15 0.86
377 378 8.714179 CGTCAGATATAGATCGAAGGGTATATC 58.286 40.741 13.56 13.56 37.15 1.63
378 379 9.787435 GTCAGATATAGATCGAAGGGTATATCT 57.213 37.037 16.13 16.13 42.24 1.98
385 386 9.976776 ATAGATCGAAGGGTATATCTTGTAAGA 57.023 33.333 0.00 0.00 39.78 2.10
386 387 8.887264 AGATCGAAGGGTATATCTTGTAAGAT 57.113 34.615 11.48 11.48 46.85 2.40
387 388 8.744652 AGATCGAAGGGTATATCTTGTAAGATG 58.255 37.037 15.51 0.00 45.01 2.90
388 389 8.651589 ATCGAAGGGTATATCTTGTAAGATGA 57.348 34.615 15.51 3.50 45.01 2.92
389 390 7.883217 TCGAAGGGTATATCTTGTAAGATGAC 58.117 38.462 15.51 12.73 45.01 3.06
390 391 7.504574 TCGAAGGGTATATCTTGTAAGATGACA 59.495 37.037 15.51 0.00 45.01 3.58
391 392 7.810282 CGAAGGGTATATCTTGTAAGATGACAG 59.190 40.741 15.51 3.33 45.01 3.51
392 393 7.546250 AGGGTATATCTTGTAAGATGACAGG 57.454 40.000 15.51 0.00 45.01 4.00
393 394 6.014156 AGGGTATATCTTGTAAGATGACAGGC 60.014 42.308 15.51 3.78 45.01 4.85
394 395 6.239600 GGGTATATCTTGTAAGATGACAGGCA 60.240 42.308 15.51 0.00 45.01 4.75
395 396 6.647067 GGTATATCTTGTAAGATGACAGGCAC 59.353 42.308 15.51 4.75 45.01 5.01
396 397 4.558226 ATCTTGTAAGATGACAGGCACA 57.442 40.909 6.33 0.00 43.81 4.57
397 398 3.664107 TCTTGTAAGATGACAGGCACAC 58.336 45.455 0.00 0.00 0.00 3.82
398 399 2.472695 TGTAAGATGACAGGCACACC 57.527 50.000 0.00 0.00 0.00 4.16
399 400 1.696884 TGTAAGATGACAGGCACACCA 59.303 47.619 0.00 0.00 39.06 4.17
400 401 2.305635 TGTAAGATGACAGGCACACCAT 59.694 45.455 0.00 0.00 39.06 3.55
401 402 2.592102 AAGATGACAGGCACACCATT 57.408 45.000 0.00 0.00 39.06 3.16
402 403 3.719268 AAGATGACAGGCACACCATTA 57.281 42.857 0.00 0.00 39.06 1.90
403 404 3.939740 AGATGACAGGCACACCATTAT 57.060 42.857 0.00 0.00 39.06 1.28
404 405 3.813443 AGATGACAGGCACACCATTATC 58.187 45.455 0.00 0.00 39.06 1.75
405 406 3.200605 AGATGACAGGCACACCATTATCA 59.799 43.478 0.00 0.00 39.06 2.15
406 407 3.650281 TGACAGGCACACCATTATCAT 57.350 42.857 0.00 0.00 39.06 2.45
407 408 3.544684 TGACAGGCACACCATTATCATC 58.455 45.455 0.00 0.00 39.06 2.92
408 409 3.054508 TGACAGGCACACCATTATCATCA 60.055 43.478 0.00 0.00 39.06 3.07
409 410 3.947196 GACAGGCACACCATTATCATCAA 59.053 43.478 0.00 0.00 39.06 2.57
410 411 3.696051 ACAGGCACACCATTATCATCAAC 59.304 43.478 0.00 0.00 39.06 3.18
411 412 3.949754 CAGGCACACCATTATCATCAACT 59.050 43.478 0.00 0.00 39.06 3.16
412 413 4.036027 CAGGCACACCATTATCATCAACTC 59.964 45.833 0.00 0.00 39.06 3.01
413 414 3.002656 GGCACACCATTATCATCAACTCG 59.997 47.826 0.00 0.00 35.26 4.18
414 415 3.623060 GCACACCATTATCATCAACTCGT 59.377 43.478 0.00 0.00 0.00 4.18
415 416 4.094887 GCACACCATTATCATCAACTCGTT 59.905 41.667 0.00 0.00 0.00 3.85
416 417 5.391950 GCACACCATTATCATCAACTCGTTT 60.392 40.000 0.00 0.00 0.00 3.60
417 418 6.611381 CACACCATTATCATCAACTCGTTTT 58.389 36.000 0.00 0.00 0.00 2.43
418 419 7.083858 CACACCATTATCATCAACTCGTTTTT 58.916 34.615 0.00 0.00 0.00 1.94
460 461 5.906113 AGATGACAAGTCACTACTAGTGG 57.094 43.478 14.97 4.89 45.94 4.00
461 462 5.571285 AGATGACAAGTCACTACTAGTGGA 58.429 41.667 13.86 1.41 45.94 4.02
462 463 5.416326 AGATGACAAGTCACTACTAGTGGAC 59.584 44.000 13.86 13.51 45.94 4.02
463 464 4.466827 TGACAAGTCACTACTAGTGGACA 58.533 43.478 13.86 4.42 45.94 4.02
464 465 5.077564 TGACAAGTCACTACTAGTGGACAT 58.922 41.667 13.86 4.85 45.94 3.06
465 466 5.048013 TGACAAGTCACTACTAGTGGACATG 60.048 44.000 13.86 17.27 45.94 3.21
466 467 4.833380 ACAAGTCACTACTAGTGGACATGT 59.167 41.667 19.97 19.97 45.94 3.21
467 468 5.164233 CAAGTCACTACTAGTGGACATGTG 58.836 45.833 13.86 8.50 45.94 3.21
468 469 3.764434 AGTCACTACTAGTGGACATGTGG 59.236 47.826 13.86 0.00 45.94 4.17
469 470 3.762288 GTCACTACTAGTGGACATGTGGA 59.238 47.826 13.86 0.00 45.94 4.02
470 471 3.762288 TCACTACTAGTGGACATGTGGAC 59.238 47.826 13.86 0.00 45.94 4.02
471 472 3.509967 CACTACTAGTGGACATGTGGACA 59.490 47.826 13.86 0.00 42.35 4.02
472 473 3.510360 ACTACTAGTGGACATGTGGACAC 59.490 47.826 13.86 9.91 0.00 3.67
473 474 1.272490 ACTAGTGGACATGTGGACACG 59.728 52.381 1.15 1.14 38.78 4.49
474 475 0.606096 TAGTGGACATGTGGACACGG 59.394 55.000 1.15 0.00 38.78 4.94
475 476 1.070786 GTGGACATGTGGACACGGT 59.929 57.895 1.15 0.00 0.00 4.83
476 477 0.319083 GTGGACATGTGGACACGGTA 59.681 55.000 1.15 0.00 0.00 4.02
477 478 0.319083 TGGACATGTGGACACGGTAC 59.681 55.000 1.15 0.71 0.00 3.34
478 479 0.319083 GGACATGTGGACACGGTACA 59.681 55.000 1.15 0.00 0.00 2.90
479 480 1.671850 GGACATGTGGACACGGTACAG 60.672 57.143 1.15 0.00 0.00 2.74
480 481 0.320374 ACATGTGGACACGGTACAGG 59.680 55.000 0.00 0.00 32.87 4.00
481 482 0.320374 CATGTGGACACGGTACAGGT 59.680 55.000 0.00 0.00 0.00 4.00
482 483 1.053424 ATGTGGACACGGTACAGGTT 58.947 50.000 0.00 0.00 0.00 3.50
496 497 3.662759 ACAGGTTTCCAGTTTCTTCCA 57.337 42.857 0.00 0.00 0.00 3.53
499 500 1.266989 GGTTTCCAGTTTCTTCCAGCG 59.733 52.381 0.00 0.00 0.00 5.18
512 513 1.078497 CCAGCGAATAGTGGTGGCA 60.078 57.895 0.00 0.00 46.72 4.92
524 525 4.012895 GTGGCAGTTGGCGTGTCG 62.013 66.667 1.08 0.00 46.16 4.35
566 567 1.142474 GCAGGCACAACTTTGATTGC 58.858 50.000 0.00 0.00 32.47 3.56
575 576 6.027131 GCACAACTTTGATTGCACGATATAA 58.973 36.000 0.00 0.00 32.38 0.98
576 577 6.692681 GCACAACTTTGATTGCACGATATAAT 59.307 34.615 0.00 0.00 32.38 1.28
577 578 7.855409 GCACAACTTTGATTGCACGATATAATA 59.145 33.333 0.00 0.00 32.38 0.98
579 580 8.342634 ACAACTTTGATTGCACGATATAATACC 58.657 33.333 0.00 0.00 32.47 2.73
580 581 8.559536 CAACTTTGATTGCACGATATAATACCT 58.440 33.333 0.00 0.00 0.00 3.08
581 582 9.772973 AACTTTGATTGCACGATATAATACCTA 57.227 29.630 0.00 0.00 0.00 3.08
659 675 2.690510 GGCTCTCTGGGCCTCCTT 60.691 66.667 4.53 0.00 45.57 3.36
707 726 5.136105 GTTGATGCCAGGATATTTCTTCCT 58.864 41.667 0.00 0.00 44.60 3.36
729 748 1.302431 CTTGTGGCGACCATGGTGA 60.302 57.895 25.52 0.00 35.28 4.02
832 865 8.237267 AGGACGTTTGCTAAAAATAGAAATGAG 58.763 33.333 0.00 0.00 0.00 2.90
852 2116 9.997172 AAATGAGAGGTCCCTAAAAGATAAAAT 57.003 29.630 0.00 0.00 0.00 1.82
977 2251 3.111838 CGCTCTCGCCTATATATGCTTG 58.888 50.000 8.17 1.89 0.00 4.01
1023 2297 2.399396 AAAAACACCATCGCTCAACG 57.601 45.000 0.00 0.00 45.62 4.10
1094 2368 3.329889 TCCAAGTCCGGCCAGCAT 61.330 61.111 2.24 0.00 0.00 3.79
1546 3308 3.005050 TCTCTGTTTTACATGTCGTCCGT 59.995 43.478 0.00 0.00 0.00 4.69
1800 3574 2.726832 ACGAACAGAGTAGGCAGTTC 57.273 50.000 0.00 0.00 37.57 3.01
1904 3690 7.639113 TTGTCATTCCTCAATTATTGGTACC 57.361 36.000 4.43 4.43 0.00 3.34
1926 3712 0.733729 ACTCGAGTGTCTATCGTGCC 59.266 55.000 19.30 0.00 40.95 5.01
2034 3820 4.570772 CCCACCTATATGTCTGTCAAAACG 59.429 45.833 0.00 0.00 0.00 3.60
2035 3821 5.175859 CCACCTATATGTCTGTCAAAACGT 58.824 41.667 0.00 0.00 0.00 3.99
2046 3832 3.464907 TGTCAAAACGTAACCCAATCGA 58.535 40.909 0.00 0.00 0.00 3.59
2061 3847 2.231215 ATCGAGCTCCCAAAATCGAG 57.769 50.000 8.47 0.00 46.16 4.04
2073 3859 1.068474 AAATCGAGCGTGGAAGTTCG 58.932 50.000 0.00 0.00 44.34 3.95
2091 3877 1.761822 GGGCTAATAGGCACCCCTC 59.238 63.158 15.79 0.00 43.44 4.30
2111 3897 2.575735 TCAAGGCCAACACATATCTGGA 59.424 45.455 5.01 0.00 31.38 3.86
2120 3906 3.371965 ACACATATCTGGAACGGGTACT 58.628 45.455 0.00 0.00 30.45 2.73
2127 3913 1.002069 TGGAACGGGTACTAGGAGGA 58.998 55.000 0.00 0.00 0.00 3.71
2159 3945 1.603802 CGGGCACATCCATAATGTCAC 59.396 52.381 0.00 0.00 45.78 3.67
2168 3954 1.202806 CCATAATGTCACATCCGGCCT 60.203 52.381 0.00 0.00 0.00 5.19
2175 3961 1.048160 TCACATCCGGCCTAGCATGA 61.048 55.000 0.00 0.00 0.00 3.07
2182 3968 1.533711 GGCCTAGCATGACCCACAT 59.466 57.895 0.00 0.00 40.17 3.21
2206 3992 4.223923 AGACCTCACTTCATTCCCACTAAG 59.776 45.833 0.00 0.00 0.00 2.18
2270 4056 1.305046 TTCCCCTCCACTCCTCGTC 60.305 63.158 0.00 0.00 0.00 4.20
2290 4076 1.392534 GTTCCTCTCCCCCTCTCCA 59.607 63.158 0.00 0.00 0.00 3.86
2305 4091 2.679837 CTCTCCATCCCAATGTTGAACG 59.320 50.000 0.00 0.00 0.00 3.95
2315 4101 0.605319 ATGTTGAACGCCGACATGGT 60.605 50.000 9.66 0.00 45.75 3.55
2320 4106 0.454600 GAACGCCGACATGGTAGAGA 59.545 55.000 0.00 0.00 41.21 3.10
2324 4110 0.941463 GCCGACATGGTAGAGATGCG 60.941 60.000 0.00 0.00 41.21 4.73
2342 4128 1.677552 GGGAACCGATGACTGGTGT 59.322 57.895 0.00 0.00 40.86 4.16
2372 4158 2.126424 GAGGCAGACGTGGTCGAC 60.126 66.667 7.13 7.13 37.67 4.20
2422 4208 2.927580 AACGCTCACGGGTCGACAT 61.928 57.895 18.91 0.00 46.04 3.06
2428 4214 0.606096 TCACGGGTCGACATTGTCAT 59.394 50.000 18.91 0.00 32.09 3.06
2525 4311 7.482654 TTTACTATGCTAGATCATTGCACAC 57.517 36.000 8.97 0.00 42.49 3.82
2563 4349 7.121382 CCATAGGCATTTATTAGATGGTCCAT 58.879 38.462 3.26 3.26 0.00 3.41
2565 4351 5.327732 AGGCATTTATTAGATGGTCCATGG 58.672 41.667 9.76 4.97 0.00 3.66
2579 4365 3.821033 GGTCCATGGTTTCTATGCCATAC 59.179 47.826 12.58 0.00 43.05 2.39
2718 4504 1.924731 ACGAGTGGGAGAATGTCTGA 58.075 50.000 0.00 0.00 0.00 3.27
2731 4517 4.593206 AGAATGTCTGAACACCCTTGTAGA 59.407 41.667 0.00 0.00 38.48 2.59
2745 4531 4.003648 CCTTGTAGACCGAGAGCAAAAAT 58.996 43.478 0.00 0.00 0.00 1.82
2765 4551 2.936050 GTTCTAACGAACGTGGTTGG 57.064 50.000 13.72 11.35 40.05 3.77
2784 4570 5.284079 GTTGGTGTAGTCGTACTTTCTTCA 58.716 41.667 0.00 0.00 0.00 3.02
2794 4580 6.536582 AGTCGTACTTTCTTCATGATCCAATG 59.463 38.462 0.00 0.00 0.00 2.82
2811 4597 2.192187 TGCAATCAAGCACCGCACA 61.192 52.632 0.00 0.00 40.11 4.57
2814 4600 1.130955 CAATCAAGCACCGCACAAAC 58.869 50.000 0.00 0.00 0.00 2.93
2835 4621 0.941463 GCACCTCCGAGATATGCACG 60.941 60.000 12.01 0.00 0.00 5.34
2842 4628 0.984829 CGAGATATGCACGCATACGG 59.015 55.000 13.68 0.93 46.04 4.02
2873 4659 1.135139 TCTCCGCTTCTTCTTGATCCG 59.865 52.381 0.00 0.00 0.00 4.18
2874 4660 0.175760 TCCGCTTCTTCTTGATCCGG 59.824 55.000 0.00 0.00 38.91 5.14
2886 4672 1.078143 GATCCGGCAAGCAAGAGGT 60.078 57.895 0.00 0.00 0.00 3.85
2919 4705 0.457851 ATCTAGGACAGCAGCACGAC 59.542 55.000 0.00 0.00 0.00 4.34
2922 4708 4.664677 GGACAGCAGCACGACGGT 62.665 66.667 0.00 0.00 0.00 4.83
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.462782 CGACCTCGACCTCGACCTC 61.463 68.421 1.47 0.00 44.22 3.85
1 2 2.436292 CGACCTCGACCTCGACCT 60.436 66.667 1.47 0.00 44.22 3.85
2 3 2.435586 TCGACCTCGACCTCGACC 60.436 66.667 5.73 0.00 44.22 4.79
14 15 2.797278 ATGGAGGACGCCATCGACC 61.797 63.158 1.47 0.00 45.36 4.79
15 16 2.815308 ATGGAGGACGCCATCGAC 59.185 61.111 1.47 0.00 45.36 4.20
20 21 2.046023 CAGCAATGGAGGACGCCA 60.046 61.111 0.00 0.00 43.23 5.69
21 22 2.825836 CCAGCAATGGAGGACGCC 60.826 66.667 0.00 0.00 0.00 5.68
22 23 1.244019 AAACCAGCAATGGAGGACGC 61.244 55.000 0.31 0.00 0.00 5.19
23 24 0.523072 CAAACCAGCAATGGAGGACG 59.477 55.000 0.31 0.00 0.00 4.79
24 25 0.890683 CCAAACCAGCAATGGAGGAC 59.109 55.000 0.31 0.00 36.27 3.85
25 26 0.251742 CCCAAACCAGCAATGGAGGA 60.252 55.000 0.31 0.00 36.27 3.71
26 27 1.259840 CCCCAAACCAGCAATGGAGG 61.260 60.000 0.31 0.36 36.27 4.30
27 28 1.259840 CCCCCAAACCAGCAATGGAG 61.260 60.000 0.31 0.00 36.27 3.86
28 29 1.229145 CCCCCAAACCAGCAATGGA 60.229 57.895 0.31 0.00 36.27 3.41
29 30 2.958281 GCCCCCAAACCAGCAATGG 61.958 63.158 0.00 0.00 0.00 3.16
30 31 2.664398 GCCCCCAAACCAGCAATG 59.336 61.111 0.00 0.00 0.00 2.82
31 32 2.996734 CGCCCCCAAACCAGCAAT 60.997 61.111 0.00 0.00 0.00 3.56
58 59 1.172812 AAAAACACTCCCGCCAGAGC 61.173 55.000 0.00 0.00 37.39 4.09
59 60 0.593128 CAAAAACACTCCCGCCAGAG 59.407 55.000 0.00 0.00 39.91 3.35
60 61 0.821711 CCAAAAACACTCCCGCCAGA 60.822 55.000 0.00 0.00 0.00 3.86
61 62 1.659794 CCAAAAACACTCCCGCCAG 59.340 57.895 0.00 0.00 0.00 4.85
62 63 1.830408 CCCAAAAACACTCCCGCCA 60.830 57.895 0.00 0.00 0.00 5.69
63 64 1.110518 TTCCCAAAAACACTCCCGCC 61.111 55.000 0.00 0.00 0.00 6.13
64 65 0.747852 TTTCCCAAAAACACTCCCGC 59.252 50.000 0.00 0.00 0.00 6.13
65 66 3.389221 CATTTTCCCAAAAACACTCCCG 58.611 45.455 0.00 0.00 37.20 5.14
66 67 3.495983 CCCATTTTCCCAAAAACACTCCC 60.496 47.826 0.00 0.00 37.20 4.30
67 68 3.495983 CCCCATTTTCCCAAAAACACTCC 60.496 47.826 0.00 0.00 37.20 3.85
68 69 3.495983 CCCCCATTTTCCCAAAAACACTC 60.496 47.826 0.00 0.00 37.20 3.51
69 70 2.441375 CCCCCATTTTCCCAAAAACACT 59.559 45.455 0.00 0.00 37.20 3.55
70 71 2.439880 TCCCCCATTTTCCCAAAAACAC 59.560 45.455 0.00 0.00 37.20 3.32
71 72 2.776665 TCCCCCATTTTCCCAAAAACA 58.223 42.857 0.00 0.00 37.20 2.83
72 73 3.866703 TTCCCCCATTTTCCCAAAAAC 57.133 42.857 0.00 0.00 37.20 2.43
73 74 4.881157 TTTTCCCCCATTTTCCCAAAAA 57.119 36.364 0.00 0.00 38.66 1.94
74 75 4.448347 CCATTTTCCCCCATTTTCCCAAAA 60.448 41.667 0.00 0.00 34.41 2.44
75 76 3.075134 CCATTTTCCCCCATTTTCCCAAA 59.925 43.478 0.00 0.00 0.00 3.28
76 77 2.646798 CCATTTTCCCCCATTTTCCCAA 59.353 45.455 0.00 0.00 0.00 4.12
77 78 2.273619 CCATTTTCCCCCATTTTCCCA 58.726 47.619 0.00 0.00 0.00 4.37
78 79 2.274542 ACCATTTTCCCCCATTTTCCC 58.725 47.619 0.00 0.00 0.00 3.97
79 80 3.073798 ACAACCATTTTCCCCCATTTTCC 59.926 43.478 0.00 0.00 0.00 3.13
80 81 4.071423 CACAACCATTTTCCCCCATTTTC 58.929 43.478 0.00 0.00 0.00 2.29
81 82 3.181435 CCACAACCATTTTCCCCCATTTT 60.181 43.478 0.00 0.00 0.00 1.82
82 83 2.374839 CCACAACCATTTTCCCCCATTT 59.625 45.455 0.00 0.00 0.00 2.32
83 84 1.984424 CCACAACCATTTTCCCCCATT 59.016 47.619 0.00 0.00 0.00 3.16
84 85 1.655372 CCACAACCATTTTCCCCCAT 58.345 50.000 0.00 0.00 0.00 4.00
85 86 1.124477 GCCACAACCATTTTCCCCCA 61.124 55.000 0.00 0.00 0.00 4.96
86 87 0.835971 AGCCACAACCATTTTCCCCC 60.836 55.000 0.00 0.00 0.00 5.40
87 88 0.321346 CAGCCACAACCATTTTCCCC 59.679 55.000 0.00 0.00 0.00 4.81
88 89 0.321346 CCAGCCACAACCATTTTCCC 59.679 55.000 0.00 0.00 0.00 3.97
89 90 0.320683 GCCAGCCACAACCATTTTCC 60.321 55.000 0.00 0.00 0.00 3.13
90 91 0.392336 TGCCAGCCACAACCATTTTC 59.608 50.000 0.00 0.00 0.00 2.29
91 92 0.106521 GTGCCAGCCACAACCATTTT 59.893 50.000 0.00 0.00 44.06 1.82
92 93 1.747774 GTGCCAGCCACAACCATTT 59.252 52.632 0.00 0.00 44.06 2.32
93 94 2.209315 GGTGCCAGCCACAACCATT 61.209 57.895 0.00 0.00 46.50 3.16
94 95 2.601367 GGTGCCAGCCACAACCAT 60.601 61.111 0.00 0.00 46.50 3.55
96 97 4.947147 TCGGTGCCAGCCACAACC 62.947 66.667 0.00 0.00 46.50 3.77
97 98 3.660111 GTCGGTGCCAGCCACAAC 61.660 66.667 0.00 0.00 46.50 3.32
98 99 4.182433 TGTCGGTGCCAGCCACAA 62.182 61.111 0.00 0.00 46.50 3.33
99 100 4.624364 CTGTCGGTGCCAGCCACA 62.624 66.667 0.00 0.00 46.50 4.17
120 121 4.153330 TACTCCTCTCCCCGGGCC 62.153 72.222 17.73 0.00 0.00 5.80
121 122 2.522193 CTACTCCTCTCCCCGGGC 60.522 72.222 17.73 0.00 0.00 6.13
122 123 2.198980 CCTACTCCTCTCCCCGGG 59.801 72.222 15.80 15.80 0.00 5.73
123 124 2.522193 GCCTACTCCTCTCCCCGG 60.522 72.222 0.00 0.00 0.00 5.73
124 125 2.907917 CGCCTACTCCTCTCCCCG 60.908 72.222 0.00 0.00 0.00 5.73
125 126 3.228017 GCGCCTACTCCTCTCCCC 61.228 72.222 0.00 0.00 0.00 4.81
126 127 3.597728 CGCGCCTACTCCTCTCCC 61.598 72.222 0.00 0.00 0.00 4.30
127 128 4.273257 GCGCGCCTACTCCTCTCC 62.273 72.222 23.24 0.00 0.00 3.71
128 129 4.615834 CGCGCGCCTACTCCTCTC 62.616 72.222 27.72 0.00 0.00 3.20
151 152 4.773117 GGCGGACACGAGACGGAC 62.773 72.222 0.00 0.00 44.60 4.79
154 155 4.778415 CAGGGCGGACACGAGACG 62.778 72.222 0.00 0.00 44.60 4.18
155 156 3.371063 TCAGGGCGGACACGAGAC 61.371 66.667 0.00 0.00 44.60 3.36
156 157 3.371063 GTCAGGGCGGACACGAGA 61.371 66.667 0.00 0.00 44.60 4.04
157 158 4.778415 CGTCAGGGCGGACACGAG 62.778 72.222 8.38 0.00 44.60 4.18
160 161 4.980805 TTGCGTCAGGGCGGACAC 62.981 66.667 8.38 0.00 37.66 3.67
161 162 3.545124 ATTTGCGTCAGGGCGGACA 62.545 57.895 8.38 0.00 37.66 4.02
162 163 2.746277 ATTTGCGTCAGGGCGGAC 60.746 61.111 0.00 0.00 35.06 4.79
163 164 2.435938 GATTTGCGTCAGGGCGGA 60.436 61.111 0.00 0.00 35.06 5.54
164 165 3.508840 GGATTTGCGTCAGGGCGG 61.509 66.667 0.00 0.00 35.06 6.13
165 166 3.864686 CGGATTTGCGTCAGGGCG 61.865 66.667 0.00 0.00 35.06 6.13
166 167 3.508840 CCGGATTTGCGTCAGGGC 61.509 66.667 0.00 0.00 30.87 5.19
167 168 3.508840 GCCGGATTTGCGTCAGGG 61.509 66.667 5.05 0.00 34.50 4.45
168 169 2.436646 AGCCGGATTTGCGTCAGG 60.437 61.111 5.05 0.00 36.65 3.86
169 170 1.298157 TTGAGCCGGATTTGCGTCAG 61.298 55.000 5.05 0.00 0.00 3.51
170 171 0.886938 TTTGAGCCGGATTTGCGTCA 60.887 50.000 5.05 0.00 0.00 4.35
171 172 0.239879 TTTTGAGCCGGATTTGCGTC 59.760 50.000 5.05 0.00 0.00 5.19
172 173 0.671251 TTTTTGAGCCGGATTTGCGT 59.329 45.000 5.05 0.00 0.00 5.24
173 174 1.655099 CATTTTTGAGCCGGATTTGCG 59.345 47.619 5.05 0.00 0.00 4.85
174 175 2.001872 CCATTTTTGAGCCGGATTTGC 58.998 47.619 5.05 0.00 0.00 3.68
175 176 2.620242 CCCATTTTTGAGCCGGATTTG 58.380 47.619 5.05 0.00 0.00 2.32
176 177 1.066215 GCCCATTTTTGAGCCGGATTT 60.066 47.619 5.05 0.00 0.00 2.17
177 178 0.536724 GCCCATTTTTGAGCCGGATT 59.463 50.000 5.05 0.00 0.00 3.01
178 179 1.329913 GGCCCATTTTTGAGCCGGAT 61.330 55.000 5.05 0.00 35.30 4.18
179 180 1.981853 GGCCCATTTTTGAGCCGGA 60.982 57.895 5.05 0.00 35.30 5.14
180 181 2.578664 GGCCCATTTTTGAGCCGG 59.421 61.111 0.00 0.00 35.30 6.13
182 183 0.904394 TCCAGGCCCATTTTTGAGCC 60.904 55.000 0.00 0.00 46.13 4.70
183 184 0.975887 TTCCAGGCCCATTTTTGAGC 59.024 50.000 0.00 0.00 0.00 4.26
184 185 2.093341 CCATTCCAGGCCCATTTTTGAG 60.093 50.000 0.00 0.00 0.00 3.02
185 186 1.907936 CCATTCCAGGCCCATTTTTGA 59.092 47.619 0.00 0.00 0.00 2.69
186 187 1.065272 CCCATTCCAGGCCCATTTTTG 60.065 52.381 0.00 0.00 0.00 2.44
187 188 1.288188 CCCATTCCAGGCCCATTTTT 58.712 50.000 0.00 0.00 0.00 1.94
188 189 0.118952 ACCCATTCCAGGCCCATTTT 59.881 50.000 0.00 0.00 0.00 1.82
189 190 0.325577 GACCCATTCCAGGCCCATTT 60.326 55.000 0.00 0.00 0.00 2.32
190 191 1.311059 GACCCATTCCAGGCCCATT 59.689 57.895 0.00 0.00 0.00 3.16
191 192 3.018901 GACCCATTCCAGGCCCAT 58.981 61.111 0.00 0.00 0.00 4.00
192 193 3.727258 CGACCCATTCCAGGCCCA 61.727 66.667 0.00 0.00 0.00 5.36
206 207 2.600475 TTTTTCGTCTGCGGGCGAC 61.600 57.895 24.12 3.37 36.82 5.19
207 208 2.280254 TTTTTCGTCTGCGGGCGA 60.280 55.556 20.19 20.19 38.89 5.54
208 209 2.127383 GTTTTTCGTCTGCGGGCG 60.127 61.111 14.78 14.78 38.89 6.13
209 210 2.127383 CGTTTTTCGTCTGCGGGC 60.127 61.111 0.00 0.00 38.89 6.13
210 211 2.554272 CCGTTTTTCGTCTGCGGG 59.446 61.111 0.00 0.00 38.86 6.13
211 212 2.554272 CCCGTTTTTCGTCTGCGG 59.446 61.111 0.00 0.00 41.82 5.69
212 213 2.127383 GCCCGTTTTTCGTCTGCG 60.127 61.111 0.00 0.00 37.94 5.18
213 214 2.127383 CGCCCGTTTTTCGTCTGC 60.127 61.111 0.00 0.00 37.94 4.26
214 215 2.127383 GCGCCCGTTTTTCGTCTG 60.127 61.111 0.00 0.00 37.94 3.51
215 216 3.708734 CGCGCCCGTTTTTCGTCT 61.709 61.111 0.00 0.00 37.94 4.18
238 239 4.676586 CAACGCGCCGACCCAAAC 62.677 66.667 5.73 0.00 0.00 2.93
251 252 3.601685 AAAAGTGGCGGCCCAACG 61.602 61.111 17.97 0.00 44.33 4.10
252 253 2.028925 CAAAAGTGGCGGCCCAAC 59.971 61.111 17.97 9.12 44.33 3.77
253 254 2.443016 ACAAAAGTGGCGGCCCAA 60.443 55.556 17.97 0.00 44.33 4.12
254 255 2.909965 GACAAAAGTGGCGGCCCA 60.910 61.111 17.97 1.34 39.32 5.36
255 256 3.680786 GGACAAAAGTGGCGGCCC 61.681 66.667 17.97 8.02 31.03 5.80
256 257 4.038080 CGGACAAAAGTGGCGGCC 62.038 66.667 13.32 13.32 31.03 6.13
258 259 4.383602 CGCGGACAAAAGTGGCGG 62.384 66.667 0.00 0.00 42.86 6.13
260 261 2.251371 GACGCGGACAAAAGTGGC 59.749 61.111 12.47 0.00 0.00 5.01
261 262 1.952133 TCGACGCGGACAAAAGTGG 60.952 57.895 12.47 0.00 0.00 4.00
262 263 1.200839 GTCGACGCGGACAAAAGTG 59.799 57.895 12.47 0.00 36.91 3.16
263 264 1.952635 GGTCGACGCGGACAAAAGT 60.953 57.895 12.47 0.00 38.70 2.66
264 265 2.664436 GGGTCGACGCGGACAAAAG 61.664 63.158 17.36 0.00 38.70 2.27
265 266 2.662527 GGGTCGACGCGGACAAAA 60.663 61.111 17.36 0.00 38.70 2.44
266 267 2.919960 TTTGGGTCGACGCGGACAAA 62.920 55.000 25.18 17.38 38.70 2.83
267 268 3.442512 TTTGGGTCGACGCGGACAA 62.443 57.895 25.18 12.71 38.70 3.18
268 269 3.914117 TTTGGGTCGACGCGGACA 61.914 61.111 25.18 7.18 38.70 4.02
269 270 3.408851 GTTTGGGTCGACGCGGAC 61.409 66.667 25.18 21.13 36.18 4.79
270 271 3.851845 CTGTTTGGGTCGACGCGGA 62.852 63.158 25.18 14.95 0.00 5.54
271 272 3.411351 CTGTTTGGGTCGACGCGG 61.411 66.667 25.18 10.55 0.00 6.46
272 273 2.355363 TCTGTTTGGGTCGACGCG 60.355 61.111 25.18 3.53 0.00 6.01
273 274 2.654912 CGTCTGTTTGGGTCGACGC 61.655 63.158 24.41 24.41 41.97 5.19
274 275 3.534160 CGTCTGTTTGGGTCGACG 58.466 61.111 9.92 0.00 42.39 5.12
275 276 1.219522 CCACGTCTGTTTGGGTCGAC 61.220 60.000 7.13 7.13 0.00 4.20
276 277 1.068417 CCACGTCTGTTTGGGTCGA 59.932 57.895 0.00 0.00 0.00 4.20
277 278 1.959226 CCCACGTCTGTTTGGGTCG 60.959 63.158 0.00 0.00 46.74 4.79
278 279 4.058797 CCCACGTCTGTTTGGGTC 57.941 61.111 0.00 0.00 46.74 4.46
281 282 3.353836 CCGCCCACGTCTGTTTGG 61.354 66.667 0.00 0.00 37.70 3.28
282 283 2.280524 TCCGCCCACGTCTGTTTG 60.281 61.111 0.00 0.00 37.70 2.93
283 284 2.280592 GTCCGCCCACGTCTGTTT 60.281 61.111 0.00 0.00 37.70 2.83
284 285 4.657824 CGTCCGCCCACGTCTGTT 62.658 66.667 0.00 0.00 37.70 3.16
286 287 3.851845 TTTCGTCCGCCCACGTCTG 62.852 63.158 2.31 0.00 40.79 3.51
287 288 2.939261 ATTTCGTCCGCCCACGTCT 61.939 57.895 2.31 0.00 40.79 4.18
288 289 2.433664 ATTTCGTCCGCCCACGTC 60.434 61.111 2.31 0.00 40.79 4.34
289 290 2.740826 CATTTCGTCCGCCCACGT 60.741 61.111 2.31 0.00 40.79 4.49
290 291 3.496131 CCATTTCGTCCGCCCACG 61.496 66.667 0.00 0.00 41.36 4.94
291 292 3.131478 CCCATTTCGTCCGCCCAC 61.131 66.667 0.00 0.00 0.00 4.61
292 293 3.615509 GACCCATTTCGTCCGCCCA 62.616 63.158 0.00 0.00 0.00 5.36
293 294 2.822701 GACCCATTTCGTCCGCCC 60.823 66.667 0.00 0.00 0.00 6.13
294 295 3.192922 CGACCCATTTCGTCCGCC 61.193 66.667 0.00 0.00 34.16 6.13
295 296 3.861263 GCGACCCATTTCGTCCGC 61.861 66.667 0.00 0.00 41.26 5.54
296 297 3.192922 GGCGACCCATTTCGTCCG 61.193 66.667 0.00 0.00 41.26 4.79
297 298 1.814169 GAGGCGACCCATTTCGTCC 60.814 63.158 0.00 0.00 44.90 4.79
298 299 0.462047 ATGAGGCGACCCATTTCGTC 60.462 55.000 0.00 0.00 44.12 4.20
299 300 0.035439 AATGAGGCGACCCATTTCGT 60.035 50.000 0.00 0.00 41.26 3.85
300 301 0.378257 CAATGAGGCGACCCATTTCG 59.622 55.000 0.00 0.00 42.15 3.46
301 302 1.750193 TCAATGAGGCGACCCATTTC 58.250 50.000 0.00 0.00 31.25 2.17
302 303 2.094675 CTTCAATGAGGCGACCCATTT 58.905 47.619 0.00 0.00 31.25 2.32
303 304 1.004745 ACTTCAATGAGGCGACCCATT 59.995 47.619 0.00 0.00 33.66 3.16
304 305 0.620556 ACTTCAATGAGGCGACCCAT 59.379 50.000 0.00 0.00 0.00 4.00
305 306 0.400213 AACTTCAATGAGGCGACCCA 59.600 50.000 0.00 0.00 0.00 4.51
306 307 0.804989 CAACTTCAATGAGGCGACCC 59.195 55.000 0.00 0.00 0.00 4.46
307 308 0.169009 GCAACTTCAATGAGGCGACC 59.831 55.000 0.00 0.00 0.00 4.79
308 309 1.129437 GAGCAACTTCAATGAGGCGAC 59.871 52.381 0.00 0.00 0.00 5.19
309 310 1.002430 AGAGCAACTTCAATGAGGCGA 59.998 47.619 0.00 0.00 0.00 5.54
310 311 1.446907 AGAGCAACTTCAATGAGGCG 58.553 50.000 0.00 0.00 0.00 5.52
311 312 4.637534 TGATAAGAGCAACTTCAATGAGGC 59.362 41.667 0.00 0.00 39.72 4.70
312 313 6.939132 ATGATAAGAGCAACTTCAATGAGG 57.061 37.500 0.00 0.00 39.72 3.86
313 314 8.883954 TCTATGATAAGAGCAACTTCAATGAG 57.116 34.615 0.00 0.00 39.72 2.90
314 315 9.842775 AATCTATGATAAGAGCAACTTCAATGA 57.157 29.630 0.00 0.00 39.72 2.57
315 316 9.880064 CAATCTATGATAAGAGCAACTTCAATG 57.120 33.333 0.00 0.00 39.72 2.82
316 317 8.566260 GCAATCTATGATAAGAGCAACTTCAAT 58.434 33.333 0.00 0.00 39.72 2.57
317 318 7.772292 AGCAATCTATGATAAGAGCAACTTCAA 59.228 33.333 0.00 0.00 39.72 2.69
318 319 7.278135 AGCAATCTATGATAAGAGCAACTTCA 58.722 34.615 0.00 0.00 39.72 3.02
319 320 7.727331 AGCAATCTATGATAAGAGCAACTTC 57.273 36.000 0.00 0.00 39.72 3.01
320 321 8.517062 AAAGCAATCTATGATAAGAGCAACTT 57.483 30.769 2.10 2.10 42.04 2.66
321 322 7.992033 AGAAAGCAATCTATGATAAGAGCAACT 59.008 33.333 0.00 0.00 0.00 3.16
322 323 8.152309 AGAAAGCAATCTATGATAAGAGCAAC 57.848 34.615 0.00 0.00 0.00 4.17
324 325 9.650539 GATAGAAAGCAATCTATGATAAGAGCA 57.349 33.333 14.01 0.00 41.56 4.26
325 326 9.097257 GGATAGAAAGCAATCTATGATAAGAGC 57.903 37.037 14.01 0.00 41.56 4.09
326 327 9.299963 CGGATAGAAAGCAATCTATGATAAGAG 57.700 37.037 14.01 0.00 41.56 2.85
327 328 8.807118 ACGGATAGAAAGCAATCTATGATAAGA 58.193 33.333 14.01 0.00 41.56 2.10
328 329 8.994429 ACGGATAGAAAGCAATCTATGATAAG 57.006 34.615 14.01 5.55 41.56 1.73
329 330 8.585018 TGACGGATAGAAAGCAATCTATGATAA 58.415 33.333 14.01 0.00 41.56 1.75
330 331 8.122472 TGACGGATAGAAAGCAATCTATGATA 57.878 34.615 14.01 0.00 41.56 2.15
331 332 6.997655 TGACGGATAGAAAGCAATCTATGAT 58.002 36.000 14.01 2.35 41.56 2.45
332 333 6.265422 TCTGACGGATAGAAAGCAATCTATGA 59.735 38.462 14.01 4.03 41.56 2.15
333 334 6.450545 TCTGACGGATAGAAAGCAATCTATG 58.549 40.000 14.01 5.65 41.56 2.23
334 335 6.656632 TCTGACGGATAGAAAGCAATCTAT 57.343 37.500 10.14 10.14 43.61 1.98
335 336 6.656632 ATCTGACGGATAGAAAGCAATCTA 57.343 37.500 0.00 1.53 36.41 1.98
336 337 5.543507 ATCTGACGGATAGAAAGCAATCT 57.456 39.130 0.00 0.00 32.04 2.40
337 338 8.462811 TCTATATCTGACGGATAGAAAGCAATC 58.537 37.037 9.78 0.00 39.89 2.67
338 339 8.354711 TCTATATCTGACGGATAGAAAGCAAT 57.645 34.615 9.78 0.00 39.89 3.56
339 340 7.761038 TCTATATCTGACGGATAGAAAGCAA 57.239 36.000 9.78 0.00 39.89 3.91
340 341 7.201652 CGATCTATATCTGACGGATAGAAAGCA 60.202 40.741 9.78 0.44 39.89 3.91
341 342 7.011576 TCGATCTATATCTGACGGATAGAAAGC 59.988 40.741 9.78 0.00 39.89 3.51
342 343 8.426881 TCGATCTATATCTGACGGATAGAAAG 57.573 38.462 9.78 7.25 39.89 2.62
343 344 8.788325 TTCGATCTATATCTGACGGATAGAAA 57.212 34.615 9.78 0.00 39.89 2.52
344 345 7.496263 CCTTCGATCTATATCTGACGGATAGAA 59.504 40.741 9.78 5.89 39.89 2.10
345 346 6.987404 CCTTCGATCTATATCTGACGGATAGA 59.013 42.308 9.78 4.48 39.89 1.98
346 347 6.203915 CCCTTCGATCTATATCTGACGGATAG 59.796 46.154 9.78 0.00 39.89 2.08
347 348 6.056236 CCCTTCGATCTATATCTGACGGATA 58.944 44.000 6.45 6.45 40.69 2.59
348 349 4.884744 CCCTTCGATCTATATCTGACGGAT 59.115 45.833 1.60 1.60 38.38 4.18
349 350 4.262617 CCCTTCGATCTATATCTGACGGA 58.737 47.826 0.00 0.00 31.66 4.69
350 351 4.011023 ACCCTTCGATCTATATCTGACGG 58.989 47.826 0.00 0.00 30.75 4.79
351 352 6.928979 ATACCCTTCGATCTATATCTGACG 57.071 41.667 0.00 0.00 0.00 4.35
352 353 9.787435 AGATATACCCTTCGATCTATATCTGAC 57.213 37.037 14.52 0.00 37.46 3.51
359 360 9.976776 TCTTACAAGATATACCCTTCGATCTAT 57.023 33.333 0.00 0.00 0.00 1.98
360 361 9.976776 ATCTTACAAGATATACCCTTCGATCTA 57.023 33.333 2.59 0.00 43.66 1.98
361 362 8.744652 CATCTTACAAGATATACCCTTCGATCT 58.255 37.037 4.20 0.00 43.65 2.75
362 363 8.740906 TCATCTTACAAGATATACCCTTCGATC 58.259 37.037 4.20 0.00 43.65 3.69
363 364 8.524487 GTCATCTTACAAGATATACCCTTCGAT 58.476 37.037 4.20 0.00 43.65 3.59
364 365 7.504574 TGTCATCTTACAAGATATACCCTTCGA 59.495 37.037 4.20 0.00 43.65 3.71
365 366 7.658261 TGTCATCTTACAAGATATACCCTTCG 58.342 38.462 4.20 0.00 43.65 3.79
366 367 8.091449 CCTGTCATCTTACAAGATATACCCTTC 58.909 40.741 4.20 0.00 43.65 3.46
367 368 7.473511 GCCTGTCATCTTACAAGATATACCCTT 60.474 40.741 4.20 0.00 43.65 3.95
368 369 6.014156 GCCTGTCATCTTACAAGATATACCCT 60.014 42.308 4.20 0.00 43.65 4.34
369 370 6.166982 GCCTGTCATCTTACAAGATATACCC 58.833 44.000 4.20 0.00 43.65 3.69
370 371 6.647067 GTGCCTGTCATCTTACAAGATATACC 59.353 42.308 4.20 0.00 43.65 2.73
371 372 7.169982 GTGTGCCTGTCATCTTACAAGATATAC 59.830 40.741 4.20 6.85 43.65 1.47
372 373 7.210174 GTGTGCCTGTCATCTTACAAGATATA 58.790 38.462 4.20 0.00 43.65 0.86
373 374 6.051717 GTGTGCCTGTCATCTTACAAGATAT 58.948 40.000 4.20 0.00 43.65 1.63
374 375 5.419542 GTGTGCCTGTCATCTTACAAGATA 58.580 41.667 4.20 0.00 43.65 1.98
375 376 4.256920 GTGTGCCTGTCATCTTACAAGAT 58.743 43.478 0.00 0.00 46.30 2.40
376 377 3.557054 GGTGTGCCTGTCATCTTACAAGA 60.557 47.826 0.00 0.00 39.78 3.02
377 378 2.744202 GGTGTGCCTGTCATCTTACAAG 59.256 50.000 0.00 0.00 0.00 3.16
378 379 2.105649 TGGTGTGCCTGTCATCTTACAA 59.894 45.455 0.00 0.00 35.27 2.41
379 380 1.696884 TGGTGTGCCTGTCATCTTACA 59.303 47.619 0.00 0.00 35.27 2.41
380 381 2.472695 TGGTGTGCCTGTCATCTTAC 57.527 50.000 0.00 0.00 35.27 2.34
381 382 3.719268 AATGGTGTGCCTGTCATCTTA 57.281 42.857 0.00 0.00 35.27 2.10
382 383 2.592102 AATGGTGTGCCTGTCATCTT 57.408 45.000 0.00 0.00 35.27 2.40
383 384 3.200605 TGATAATGGTGTGCCTGTCATCT 59.799 43.478 0.00 0.00 35.27 2.90
384 385 3.544684 TGATAATGGTGTGCCTGTCATC 58.455 45.455 0.00 0.00 35.27 2.92
385 386 3.650281 TGATAATGGTGTGCCTGTCAT 57.350 42.857 0.00 0.00 35.27 3.06
386 387 3.054508 TGATGATAATGGTGTGCCTGTCA 60.055 43.478 0.00 0.00 35.27 3.58
387 388 3.544684 TGATGATAATGGTGTGCCTGTC 58.455 45.455 0.00 0.00 35.27 3.51
388 389 3.650281 TGATGATAATGGTGTGCCTGT 57.350 42.857 0.00 0.00 35.27 4.00
389 390 3.949754 AGTTGATGATAATGGTGTGCCTG 59.050 43.478 0.00 0.00 35.27 4.85
390 391 4.202441 GAGTTGATGATAATGGTGTGCCT 58.798 43.478 0.00 0.00 35.27 4.75
391 392 3.002656 CGAGTTGATGATAATGGTGTGCC 59.997 47.826 0.00 0.00 0.00 5.01
392 393 3.623060 ACGAGTTGATGATAATGGTGTGC 59.377 43.478 0.00 0.00 0.00 4.57
393 394 5.801350 AACGAGTTGATGATAATGGTGTG 57.199 39.130 0.00 0.00 0.00 3.82
394 395 6.817765 AAAACGAGTTGATGATAATGGTGT 57.182 33.333 0.00 0.00 0.00 4.16
449 450 3.509967 TGTCCACATGTCCACTAGTAGTG 59.490 47.826 21.39 21.39 45.53 2.74
450 451 3.510360 GTGTCCACATGTCCACTAGTAGT 59.490 47.826 0.00 0.00 0.00 2.73
451 452 3.427638 CGTGTCCACATGTCCACTAGTAG 60.428 52.174 14.49 0.00 0.00 2.57
452 453 2.490509 CGTGTCCACATGTCCACTAGTA 59.509 50.000 14.49 0.00 0.00 1.82
453 454 1.272490 CGTGTCCACATGTCCACTAGT 59.728 52.381 14.49 0.00 0.00 2.57
454 455 1.404181 CCGTGTCCACATGTCCACTAG 60.404 57.143 14.49 0.00 0.00 2.57
455 456 0.606096 CCGTGTCCACATGTCCACTA 59.394 55.000 14.49 0.00 0.00 2.74
456 457 1.371183 CCGTGTCCACATGTCCACT 59.629 57.895 14.49 0.00 0.00 4.00
457 458 0.319083 TACCGTGTCCACATGTCCAC 59.681 55.000 0.00 2.49 0.00 4.02
458 459 0.319083 GTACCGTGTCCACATGTCCA 59.681 55.000 0.00 0.00 0.00 4.02
459 460 0.319083 TGTACCGTGTCCACATGTCC 59.681 55.000 0.00 0.00 0.00 4.02
460 461 1.671850 CCTGTACCGTGTCCACATGTC 60.672 57.143 0.00 0.00 0.00 3.06
461 462 0.320374 CCTGTACCGTGTCCACATGT 59.680 55.000 0.00 0.00 0.00 3.21
462 463 0.320374 ACCTGTACCGTGTCCACATG 59.680 55.000 0.00 0.00 0.00 3.21
463 464 1.053424 AACCTGTACCGTGTCCACAT 58.947 50.000 0.00 0.00 0.00 3.21
464 465 0.831966 AAACCTGTACCGTGTCCACA 59.168 50.000 0.00 0.00 0.00 4.17
465 466 1.505425 GAAACCTGTACCGTGTCCAC 58.495 55.000 0.00 0.00 0.00 4.02
466 467 0.393820 GGAAACCTGTACCGTGTCCA 59.606 55.000 12.50 0.00 37.54 4.02
467 468 0.393820 TGGAAACCTGTACCGTGTCC 59.606 55.000 11.03 11.03 38.03 4.02
468 469 1.069668 ACTGGAAACCTGTACCGTGTC 59.930 52.381 0.00 0.00 33.97 3.67
469 470 1.125633 ACTGGAAACCTGTACCGTGT 58.874 50.000 0.00 0.00 33.97 4.49
470 471 2.249844 AACTGGAAACCTGTACCGTG 57.750 50.000 0.00 0.00 34.63 4.94
471 472 2.436911 AGAAACTGGAAACCTGTACCGT 59.563 45.455 0.00 0.00 34.63 4.83
472 473 3.121738 AGAAACTGGAAACCTGTACCG 57.878 47.619 0.00 0.00 34.63 4.02
473 474 3.819337 GGAAGAAACTGGAAACCTGTACC 59.181 47.826 0.00 0.00 34.63 3.34
474 475 4.457466 TGGAAGAAACTGGAAACCTGTAC 58.543 43.478 0.00 0.00 34.63 2.90
475 476 4.714632 CTGGAAGAAACTGGAAACCTGTA 58.285 43.478 0.00 0.00 32.59 2.74
476 477 3.555966 CTGGAAGAAACTGGAAACCTGT 58.444 45.455 0.00 0.00 34.48 4.00
477 478 2.294512 GCTGGAAGAAACTGGAAACCTG 59.705 50.000 0.00 0.00 34.07 4.00
478 479 2.587522 GCTGGAAGAAACTGGAAACCT 58.412 47.619 0.00 0.00 34.07 3.50
479 480 1.266989 CGCTGGAAGAAACTGGAAACC 59.733 52.381 0.00 0.00 34.07 3.27
480 481 2.218603 TCGCTGGAAGAAACTGGAAAC 58.781 47.619 0.00 0.00 34.07 2.78
481 482 2.631160 TCGCTGGAAGAAACTGGAAA 57.369 45.000 0.00 0.00 34.07 3.13
482 483 2.631160 TTCGCTGGAAGAAACTGGAA 57.369 45.000 0.00 0.00 34.07 3.53
496 497 0.324943 AACTGCCACCACTATTCGCT 59.675 50.000 0.00 0.00 0.00 4.93
499 500 0.811281 GCCAACTGCCACCACTATTC 59.189 55.000 0.00 0.00 0.00 1.75
512 513 1.085501 ACGAAAACGACACGCCAACT 61.086 50.000 0.00 0.00 0.00 3.16
524 525 3.071479 TGCCTCTTATGGTCACGAAAAC 58.929 45.455 0.00 0.00 0.00 2.43
575 576 9.726652 ATGGATGATCTTGACATAGATAGGTAT 57.273 33.333 0.00 0.00 35.06 2.73
576 577 9.194972 GATGGATGATCTTGACATAGATAGGTA 57.805 37.037 0.00 0.00 35.06 3.08
577 578 7.147932 CGATGGATGATCTTGACATAGATAGGT 60.148 40.741 0.00 0.00 35.06 3.08
579 580 6.696583 GCGATGGATGATCTTGACATAGATAG 59.303 42.308 0.00 0.00 35.06 2.08
580 581 6.379417 AGCGATGGATGATCTTGACATAGATA 59.621 38.462 0.00 0.00 35.06 1.98
581 582 5.187381 AGCGATGGATGATCTTGACATAGAT 59.813 40.000 0.00 0.00 37.58 1.98
583 584 4.818642 AGCGATGGATGATCTTGACATAG 58.181 43.478 0.00 0.00 0.00 2.23
584 585 4.281688 TGAGCGATGGATGATCTTGACATA 59.718 41.667 0.00 0.00 0.00 2.29
586 587 2.431782 TGAGCGATGGATGATCTTGACA 59.568 45.455 0.00 0.00 0.00 3.58
596 612 1.524002 CACTGGGTGAGCGATGGAT 59.476 57.895 0.00 0.00 35.23 3.41
682 700 4.524802 AGAAATATCCTGGCATCAACCA 57.475 40.909 0.00 0.00 38.29 3.67
684 702 5.136105 AGGAAGAAATATCCTGGCATCAAC 58.864 41.667 0.00 0.00 45.60 3.18
685 703 5.393068 AGGAAGAAATATCCTGGCATCAA 57.607 39.130 0.00 0.00 45.60 2.57
707 726 0.321564 CCATGGTCGCCACAAGAAGA 60.322 55.000 2.57 0.00 35.80 2.87
729 748 1.603802 CACTCATTCTTGCCGTGTTGT 59.396 47.619 0.00 0.00 0.00 3.32
854 2118 8.626526 TCTATTTTTAGCAAACGTCCTTTCTTT 58.373 29.630 0.00 0.00 0.00 2.52
904 2178 1.224069 ATGCACTCACGCTGACACAC 61.224 55.000 0.00 0.00 0.00 3.82
1023 2297 2.898705 CTAGTGGAGATGGTTGAGCAC 58.101 52.381 0.00 0.00 0.00 4.40
1094 2368 2.574018 CGTCCTGTGACCCTGCTCA 61.574 63.158 0.00 0.00 38.32 4.26
1393 2956 2.047655 TGCCGAAGCCGAACGATT 60.048 55.556 0.00 0.00 38.69 3.34
1394 2957 2.509336 CTGCCGAAGCCGAACGAT 60.509 61.111 0.00 0.00 38.69 3.73
1451 3015 4.933563 TGCTGCTGCTGGAACGCA 62.934 61.111 17.00 0.00 40.48 5.24
1546 3308 1.971695 TCGAGCTCCAGCAAGTCGA 60.972 57.895 8.47 7.17 45.16 4.20
1904 3690 2.695148 CACGATAGACACTCGAGTTCG 58.305 52.381 26.62 26.62 39.38 3.95
1926 3712 1.200252 AGTGAGATTCGTGGAGTGTCG 59.800 52.381 0.00 0.00 0.00 4.35
1992 3778 6.269769 AGGTGGGTTTGATGTGTTTGATATTT 59.730 34.615 0.00 0.00 0.00 1.40
1993 3779 5.779771 AGGTGGGTTTGATGTGTTTGATATT 59.220 36.000 0.00 0.00 0.00 1.28
1994 3780 5.332743 AGGTGGGTTTGATGTGTTTGATAT 58.667 37.500 0.00 0.00 0.00 1.63
1995 3781 4.735369 AGGTGGGTTTGATGTGTTTGATA 58.265 39.130 0.00 0.00 0.00 2.15
1996 3782 3.575805 AGGTGGGTTTGATGTGTTTGAT 58.424 40.909 0.00 0.00 0.00 2.57
1997 3783 3.025322 AGGTGGGTTTGATGTGTTTGA 57.975 42.857 0.00 0.00 0.00 2.69
1998 3784 6.152661 ACATATAGGTGGGTTTGATGTGTTTG 59.847 38.462 0.00 0.00 0.00 2.93
2034 3820 0.539986 TGGGAGCTCGATTGGGTTAC 59.460 55.000 7.83 0.00 0.00 2.50
2035 3821 1.281419 TTGGGAGCTCGATTGGGTTA 58.719 50.000 7.83 0.00 0.00 2.85
2061 3847 0.743345 ATTAGCCCGAACTTCCACGC 60.743 55.000 0.00 0.00 0.00 5.34
2091 3877 3.003394 TCCAGATATGTGTTGGCCTTG 57.997 47.619 3.32 0.00 31.94 3.61
2111 3897 0.394899 CGGTCCTCCTAGTACCCGTT 60.395 60.000 0.00 0.00 0.00 4.44
2120 3906 2.753043 GTGCGTCCGGTCCTCCTA 60.753 66.667 0.00 0.00 0.00 2.94
2150 3936 2.289694 GCTAGGCCGGATGTGACATTAT 60.290 50.000 5.05 0.00 0.00 1.28
2159 3945 1.302033 GGTCATGCTAGGCCGGATG 60.302 63.158 5.05 5.88 34.47 3.51
2168 3954 2.965831 GAGGTCTATGTGGGTCATGCTA 59.034 50.000 0.00 0.00 37.91 3.49
2175 3961 2.902608 TGAAGTGAGGTCTATGTGGGT 58.097 47.619 0.00 0.00 0.00 4.51
2182 3968 3.791320 AGTGGGAATGAAGTGAGGTCTA 58.209 45.455 0.00 0.00 0.00 2.59
2206 3992 2.031870 GGTTTGCTCCATATGGGGTTC 58.968 52.381 22.90 7.86 38.19 3.62
2270 4056 0.689412 GGAGAGGGGGAGAGGAACAG 60.689 65.000 0.00 0.00 0.00 3.16
2290 4076 0.322098 TCGGCGTTCAACATTGGGAT 60.322 50.000 6.85 0.00 0.00 3.85
2305 4091 0.941463 CGCATCTCTACCATGTCGGC 60.941 60.000 0.00 0.00 39.03 5.54
2324 4110 0.673644 CACACCAGTCATCGGTTCCC 60.674 60.000 0.00 0.00 33.25 3.97
2342 4128 0.249868 CTGCCTCAAGGACGAACACA 60.250 55.000 0.00 0.00 37.39 3.72
2401 4187 2.660552 CGACCCGTGAGCGTTGTT 60.661 61.111 0.00 0.00 36.15 2.83
2422 4208 3.865446 AGACGATCATGCAAGATGACAA 58.135 40.909 9.56 0.00 0.00 3.18
2428 4214 5.022282 TGGAAATAGACGATCATGCAAGA 57.978 39.130 0.00 0.00 0.00 3.02
2495 4281 9.160496 GCAATGATCTAGCATAGTAAAGCTATT 57.840 33.333 7.81 0.00 41.99 1.73
2499 4285 6.203530 TGTGCAATGATCTAGCATAGTAAAGC 59.796 38.462 9.78 0.00 40.38 3.51
2525 4311 0.179084 CCTATGGCAGTGTACCCGTG 60.179 60.000 0.00 0.00 0.00 4.94
2554 4340 2.887152 GGCATAGAAACCATGGACCATC 59.113 50.000 21.47 10.48 0.00 3.51
2563 4349 9.860650 ATAACAATAAGTATGGCATAGAAACCA 57.139 29.630 7.61 0.00 41.06 3.67
2598 4384 9.920946 ATCCCTACAGATACAATAATTGTGTTT 57.079 29.630 0.00 0.00 45.03 2.83
2657 4443 9.706691 GATTAGATCTTGGGTGAATTCGTTATA 57.293 33.333 0.00 0.00 0.00 0.98
2660 4446 6.653989 AGATTAGATCTTGGGTGAATTCGTT 58.346 36.000 0.00 0.00 35.76 3.85
2712 4498 2.367567 GGTCTACAAGGGTGTTCAGACA 59.632 50.000 10.40 0.00 41.92 3.41
2718 4504 1.893801 CTCTCGGTCTACAAGGGTGTT 59.106 52.381 0.00 0.00 39.30 3.32
2731 4517 4.084013 CGTTAGAACATTTTTGCTCTCGGT 60.084 41.667 0.00 0.00 0.00 4.69
2765 4551 6.472808 GGATCATGAAGAAAGTACGACTACAC 59.527 42.308 0.00 0.00 0.00 2.90
2784 4570 3.181469 GGTGCTTGATTGCATTGGATCAT 60.181 43.478 0.00 0.00 45.23 2.45
2794 4580 0.597118 TTTGTGCGGTGCTTGATTGC 60.597 50.000 0.00 0.00 0.00 3.56
2816 4602 0.941463 CGTGCATATCTCGGAGGTGC 60.941 60.000 17.84 17.84 36.39 5.01
2835 4621 1.215655 GACATCACCGAGCCGTATGC 61.216 60.000 0.00 0.00 41.71 3.14
2873 4659 0.615850 ACCTCTACCTCTTGCTTGCC 59.384 55.000 0.00 0.00 0.00 4.52
2874 4660 2.761208 TCTACCTCTACCTCTTGCTTGC 59.239 50.000 0.00 0.00 0.00 4.01
2886 4672 5.170959 TGTCCTAGATCCCATCTACCTCTA 58.829 45.833 0.00 0.00 40.76 2.43
2919 4705 1.001520 TGTAACTCCATCACCACACCG 59.998 52.381 0.00 0.00 0.00 4.94
2922 4708 2.029380 CGACTGTAACTCCATCACCACA 60.029 50.000 0.00 0.00 0.00 4.17


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.