>input_sequence_63728
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---------------------------------CAGTAAAAACACCATCGCTCAACGTGCTCAACCATCTCCACTAGCTC
TCGACTCAGATGGACGTCGCCGACGCTGCCTCCAAGTCCGGCCAGCATGAGCA---GGGTCACAGGACGGTGTCGTCGGA
GCCGCCGAAGCGGCCGGCGGGGCGGACCAAGTTGCACGAGACGCGCCACCCGCTGTACCGGGGCGTGCGGCGCCGTGGCC
GGGT----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------CGGGCAGTGGGTGTGCGAGGTGCGCGTGCC
CGGGGTGAAGGGCTCCAGGCTCTGGCTCGGCACCTTCACCACCGCCGAGATGGCGGCGCGCGCGCACGACGCCGCGGTGC
TCGCGCTCTCCGGCCGCGCCGCCTGCCTCAACTTCGCCGACTCCGCATGGCGGATGCTGCCCGTGCTTGCGGCCGAATCG
TTCGGCTTCGGCAGCGCGCGGGAGATCAAGCTTGCCGTC-GCCGTTGCCGTCGTTGCGTTCCAGCAGCAGCAG---ATTA
TTC-----------------------------------------------------------------------------
----------TTCCAGTCGC------------------------------------------------------------
---------------------------------GTGTCCAACGGTGGAGGCGGCCGCCAGCCCGA---GCAACTCTCTGT
TTTACATGT------------CGTCCGTCGACTTGCTGGAGCTCGACGAGGAGCAGTGGTTTGGCGGCATGGACGCTGGG
TCGTACTACGAGAGCTTGGCGCAGGGGATGCTCATGGCGCCGCCGGACGACAGAGCGAGGCGGGAGGACGCCGAGCAGAC
CGGCGTC---GAGACACCGACGCCGTTATGGAGCTATTTGTTTGACTAATTCAGCACGCAGTGTAAAGTTGTCGATAG--
------TTGCGTTGTGTTCTTCCCAATTTGGGAAC-GAACAGAGTAGGCAGTTC---TTTTTTTGAAGGTTGTAGTAGGC
AGTTTGA---AGTTCCCGGTTTCTACTTTTGTGAGAAATGGACCCTA-G-----ATTGCTTATCATTGTCATTCCTCAAT
TATTGGTACCGAACTCGAGTGTCTATCGTGCCGACACTCCACGAATCTCACTCAAATATTTTATGACGAAGAAAATCAAA
CACATCACCCCGA-------------------------------------------------------------------
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-----------------------------------------------------
>chr5A_1_TraesCS5A01G310700
GAGGTCGAGGTCGAGGTCGATGGCGTCCTCCATTGCTGGTTTGGGGGCGGGGGGACGCGCTCTGGCGGGAGTGTTTTTGG
GAAAATGGGGGAAAATGGTTGTGGCTGGCACCGACAGGCGGGCCCGGGGAGAGGAGTAGGCGCGCGCGCGCGTCCGTCTC
GTGTCCGCCCTGACGCAAATCCGGCTCAAAAATGGGCCTGGAATGGGTCGCCCGCAGACGAAAAACGGGCGCGCGTCCGT
TTGGGTCGGCGCGTTGGGCCGCCACTTTTGTCCGCGTCGACCCAAACAGACGTGGGCGGACGAAATGGGTCGCCTCATTG
AAGTTGCTCTTATCATAGATTGCTTTCTATCCGTCAGATATAGATCGAAGGGTATATCTTGTAAGATGACAGGCACACCA
TTATCATCAACTCGTTTTTTATAAGAGTAGAAATTATAAGATGACAAGTCACTACTAGTGGACATGTGGACACGGTACAG
GTTTCCAGTTTCTTCCAGCGAATAGTGGTGGCAGTTGGCGTGTCGTTTTCGTGACCATAAGAGGCAAGCAGGCACAACTT
TGATTGCACGATATAATACCTATCTAT---------------GTCAAGATCATCCATCGCTCACCCAGTGGACGCCGCTG
AGTGTGAGGAAGCAGGTGGCTCTCTGGGCCTCCTTCAAAAA-ATCCTATGGCCAAGT-GTGGTT-GATGCCAGGATATTT
CTTCCTCTTCTTGTGGCGACCATGGTGACAACACGGCAAGAATGAGTGAGATATTTCAGTGGCCAGTGCTGACTGTCCTT
CAGAAAACGACCTTTG-CCTGGGG-------------GAGGACGTTTGCTAAAAATAGAAATGAGAGGTCCCTAAAAGAT
A-------------------------------------------------------------------------------
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--------------------------------AAATAAAAGAAAGGACGTTTGCTAAAAATAGAAAAAGAAGTGGCCAGT
GC----------CTCGCGTGTGTCAGCGTGAGTGCATTTCCACCCGAGTGACGCGCCGGGTAGCCGCCGCGCTCTCGCCT
ATATATGCTTGCCCCGCCGCACTCCCATTCTCTCAGTAAAAACACCATCGCTCAACGTGCTCAACCATCTCCACTAGCTC
TCGACTCAGATGGACGTCGCCGACGCTGCCTCCAAGTCCGGCCAGCATGAGCA---GGGTCACAGGACGGTGTCGTCGGA
GCCGCCGAAGCGGCCGGCGGGGCGGACCAAGTTGCACGAGACGCGCCACCCGCTGTACCGGGGCGTGCGGCGCCGTGGCC
GGGT----------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------CGGGCAGTGGGTGTGCGAGGTGCGCGTGCC
CGGGGTGAAGGGCTCCAGGCTCTGGCTCGGCACCTTCACCACCGCCGAGATGGCGGCGCGCGCGCACGACGCCGCGGTGC
TCGCGCTCTCCGGCCGCGCCGCCTGCCTCAACTTCGCCGACTCCGCATGGCGGATGCTGCCCGTGCTTGCGGCCGAATCG
TTCGGCTTCGGCAGCGCGCGGGAGATCAAGCTTGCCGTC-GCCGTTGCCGTCGTTGCGTTCCAGCAGCAGCAG---ATTA
TTC-----------------------------------------------------------------------------
----------TTCCAGTCGC------------------------------------------------------------
---------------------------------GTGTCCAACGGTGGAGGCGGCCGCCAGCCCGA---GCAACTCTCTGT
TTTACATGT------------CGTCCGTCGACTTGCTGGAGCTCGACGAGGAGCAGTGGTTTGGCGGCATGGACGCTGGG
TCGTACTACGAGAGCTTGGCGCAGGGGATGCTCATGGCGCCGCCGGACGACAGAGCGAGGCGGGAGGACGCCGAGCAGAC
CGGCGTC---GAGACACCGACGCCGTTATGGAGCTATTTGTTTGACTAATTCAGCACGCAGTGTAAAGTTGTCGATAG--
------TTGCGTTGTGTTCTTCCCAATTTGGGAAC-GAACAGAGTAGGCAGTTC---TTTTTTTGAAGGTTGTAGTAGGC
AGTTTGA---AGTTCCCGGTTTCTACTTTTGTGAGAAATGGACCCTA-G-----ATTGCTTATCATTGTCATTCCTCAAT
TATTGGTACCGAACTCGAGTGTCTATCGTGCCGACACTCCACGAATCTCACTCAAATATTTTATGACGAAGAAAATCAAA
CACATCACCCCGAAAAAAAATATCAAACACATCAAACCCACCTATATGTCTGTCAAAACGTAACCCAATCGAGCTCCCAA
AATCGAGCGTGGAAGTTCGGGCTAATAGGCACCCCTCAAGGCCAACACATATCTGGAACGGGTACTAGGAGGACCGGACG
CACCCGGGCACATCCATAATGTCACATCCGGCCTAGCATGACCCACATAGACCTCACTTCATTCCCACTAAGAACCCCAT
ATGGAGCAAACCTAAAAAAAACTTCACTCTCTGGCGCTTCCCCTCCACTCCTCGTCTGTTCCTCTCCCCCTCTCCATCCC
AATGTTGAACGCCGACATGGTAGAGATGCGGGAACCGATGACTGGTGTGTGTTCGTCCTTGAGGCAGACGTGGTCGACGA
GGAGGAGCTGGCCCTCCGCATCGTGCAACAACGCTCACGGGTCGACATTGTCATCTTGCATGATCGTCTATTTCCATGGT
AAGACAGCTAGGATGATATTTCCATGGTTCGTCTATTTTTAATAGCTTTACTATGCTAGATCATTGCACACACGGGTACA
CTGCCATAGGCATTTATTAGATGGTCCATGGTTTCTATGCCATACTTATTGTTATTAAGTTACAAACACAATTATTGTAT
CTGTAGGGATTCGTTGCATGAAAAACAATTTTTTTCCTATAATATAACGAATTCACCCAAGATCTAATCTACTAGATGCT
ACCAACGAGTGGGAGAATGTCTGAACACCCTTGTAGACCGAGAGCAAAAATGTTCTAACGAACGTGGTTGGTGTAGTCGT
ACTTTCTTCATGATCCAATGCAATCAAGCACCGCACAAACGGCACCTCCGAGATATGCACGCATACGGCTCGGTGATGTC
TCCGCTTCTTCTTGATCCGGCAAGCAAGAGGTAGAGGTAGATGGGATCTAGGACAGCAGCACGACGGTGTGGTGATGGAG
TTACAGTCGAACTCTCGCAGGGCTTCGCCAATCTTTTGCGGAGAGCTGGGAGG
>chr5D_484
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---TCCAGTTTCTTCCGGCCAATAGTGGTGGCTGTTGGCGTGTCCTTTTCGTGACCATAAGAGGCAAGCATGCACAACTT
TGATTGGACGATATATGTCAAG--------------------------ATCGTCCATTGCTCACCTAGTGGACGCCGCTG
AGTGTGAGGAAGCAGGTGGCTCTCTGGGCCTCCTCCAAAAA-ATCCTATGGCCAAGT-GGGC-T-GACGTCAGGATATTT
CTTCCCCTTCTTGTGGCGACCATTGTGCCAACACGGCAAGAACGAGTGAGATATTTCAGTGGCCAGTGCTGACTGTCCTT
CAGAAAACAACCTTTGTCCTGGTG-------------AAGGACGTTTGCTAAAAATAGAAATGAAAGGGGAGCAGCTATT
CGGTGCTCGGGCTCAGATGCACCCTAAATCCTGGACATCCAATCTAGCATGGGGATTGGAGAAAGTAGTTCTGACGCAAC
AGTGCAAGCCCATTGAAAAAGAGGCATACTTGGTGAATACAGGGAGGAACAGTGCTCTACGGTGGGCCATTTGCGTAGCA
CGCACCATCGAAATGGCCGCGCGCGGCGCGCCGTGACGCCCGCGAGGTGTGCCATGGCACATAACGTTTGCTCAGTCGTA
GACCAAGGTCCAGCTATACTATGGCGCTGCGCAGCTGGACGCCGACGGGGAGCTGCTCATGGCGTTCCGGGACCACTCAC
TGTGCGCCTGGAACAGCGTCATATGCAACGGCTTCCTGCCGCGGTGTCGCCCCAGCATCCAGCAGCAGCAGGCCTCCACG
GCCAACCTCACCTCAGCCGCCGACGGCAGCCGGAACGAGAACTTCAGAACACCCGCGGCGCGAACCGCACACTGCCCCGC
CGAGCTGGCCCGTGTCGAGCATCTGCGCCACCTCATCTCCCGAACGGGCCTCAACGGGATCCTTCCCGCCGCACTACTGC
TCAACACAACCGCTTCTGCGTCCTCTCGCTCGCCGGCAGCAACCTCTTTGGCTCCCTCCCGGCTATGGGAGTTGGGTGCC
GTTGGCGATGGTGTCGAGCAAAAACTATTCACTGCGGTGTCGCCATGCAAGGAGTGGAAAGGTCGCGAACTGCTCGACGT
CCGGAAGATAGAAGGTGCGGGCTGGAGCTCCTCCTGGATCCGGTTCCTCGTTTGTGTTCCAGCTAATCTGGCCCGTAGCA
GCTTTCCTAAGCTGATTTTGATTTTCGCCGGCGGCGAATCTCGCTTGCGACTTGTAGGTTCCCGGGAAGAGTTCACCGAC
ACAGAGCAACAAGACACGGCGCCGTTGAGGTCGCAGGTACACACTGGGCGGCGCCTATCCGCCAATGGTGAAGAGGAGCG
GACGCGTGGGAACTAGGAAGGCCGAAGCCATCCCTGACGAAGTCTGTTGATTAAAATAGTCTGTTTCCTGCTCCATGCAC
CGGAACGGTGCACTCCCCACCGAATAATCACAATAAATGCGATTGATATGTTTCTGTCGAAATACACAAGAGATACGGGG
GAGAAATACGGGATATGGCTGCGATCACGAGGATAACTGGTGGCAGGGATATCAGGAGTATCTGAGCACGGGCTCAGAAT
TGAATTTTTGAAATGAAAGGTCCCTAAAAGATAAAAAGAAGAAAGGACGTTTGCTAAAAATAGAAAAAGATGTGGCCAGT
CCTGACT-CTCGCTCACTTGTGTCAGCGTGAGTGCATTTCCACACGAGTGACGCGCCGGGTAGTCGCCGCGCTCGCGCCT
ATATATGCTTCCCCCGCCGCACTCCCATTTTCTCAGTAAAAACACCATCGCTCAACCTGCTCAACCATCTCCACAAGCTC
TCGACTCAGATGGGCGTCGCCGACGCTGCCTCCAGGTCCGGCCAGCAGGAGCA---GGGTCACAGGACGGTGTCGTCAGA
GCCGCCGAAGCGGCCGGCGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGGGCAGTGGGTGTGTGAGGTGCGCGTGCC
CGGGGTGAAGGGCTCCAGGCTCTGGCTCGGCACCTTCACCACCGCCGAGATGGCGGCGCGCGCCCACGACGCCGCAGTGC
TCGCACTCTCCGGCCGCGCCGCCTGCCTCAACTTCGCCGACTCCGCATGGCGGATGCTACTCGTGCTTGCGGCCGGGTCG
TTCGGCTTCGGCAGCGCGCGGGAGATCAAGCTTGCCGTC-GCCGTTGCCGTCATCGCGTTCCAGCAGCAGCAGCAGATTA
TTC-----------------------------------------------------------------------------
----------TTCCAGTCGC------------------------------------------------------------
---------------------------------GTGTCCAACAGTGGAGGCGGCCGCCAGCCCGA---GCAACACTCTTT
TTTACATGT------------CGTCCCGCGACTTGCTGGAGCTCGACGAGGAGCAGTGGTTTGGCGGCATGGACGCTGGG
TCGTACTACGAGAGCTTGGCGCAGGGGATGCTCATGGCGCCGCCGGACGACAGAGCGAGGCGGGAGGACGCCGAGCAGAC
CGGCGTC---GAGACACTGACGCCGCTATGGAACTATTTGTTTGACTAATTCAGCCCACAGTGTAAAGTTGTCGATAT--
------TTGTGTTGTGTTCTTCCTGATTTGGGAAC-AAACAGAGTAGGCAGTTTTTGTTTTTTTGAAGGTTGTAGTAGGC
AGTTTGA---AGTTCCCGGTTTCTACTTTTGTGAGAAATGGACCCTA-G-----ATTGCTTATAATTGTCATTCCTCAAT
TATTGGTACAGAACTCGAGTGTCTATCGTGCAGACACTCCACAAATCTCACTCAAATATTTTATGACGAAGAAAATCAAA
CACAACACCCCGAAAAA-------AAACACATCAAACCCACCTATATGTCTGTCAAAACAAAACCCAATCGGGCTCCCAA
AATCGATCGTGGAAGTTCAGGCTAATAGGCACCCCTAAAGGCCAACACATATCTGGGACGGGTACCAGGAGGGCCGGACG
CACTCGGGCACATCCGTAATGTCAAATCCGGCCCAGCATGGCCCACACAGACCTCACTTCATTCCCACTAAAAACCCCAT
ATGGAGCAAACCTAAAAAAAACTTCACTCTCCGGCGCTTCCCCTCCACTCCTCGTTTGTTCCTCTCCCCCTCTCCGTCCC
AATGTTGAACACCGACATGGCAGAGGTGCAGGAACCGATGACTGGTGCGTGTTCGTCCTTGAGGCAGACGTGGTCGATGA
GGAGGAGCTGGCCCTCCGCATCGTGCGACAACGCTCACGGGTCGACACTGTCACCTTGCATGATCGTCTATTTCCATGGT
AAGACAGCTAGGATGATATTTCCATGGTTCGTCTATTTTTGATACCTTTACTATGCTAGATCATTGCACAAACGGGTACA
CTGCCATAGGCATTTATTATATGGTCCAGGATTTCTATGCCATATTTATTGTTATTAAGTTACGAACACAATTATTGTAT
CTGTAGGGATTCGTTGCATGAAAAACAATTTTTTTCCTACGAGATGACGAATTCACCCAAGATCTAATCTACTAGATGCT
ACCAACGAGTGGGAGAAAGTCTGCACACCCTTGTAGCCCGAGAGCAAAAACGTTCTAACGAACGTGGTTGATGTAGTCGT
ACTTTCTTCGTGATCCAATCCAATCAAGCACCGCACGAATGACACCTCCGACATATGCACACATACGACTCGGTGATGTC
TCCGCTTCTTCTTGATCCAACAAGCAAGAGGGAGAGGTAGATGGGATCTAGGACAGCAGCACGATGGCGTGGTGATGGAG
TTACAGTCGAACTCTCGCAGGGCTTCGCCAATCTTTTACGGAGAGGTGGGAGG
>chr1B_504
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-----------------------AGTGGTGGCTGTTGGCGTGTCCTTTTCGTGACCATAAGAGGCAAGCAGGCACAACTT
TGATTGGACGATATATGTCAAGTAAAGCTACCGATCTACTACGTCAAGATCGTCCATCGCTCACCCAGTGGACGCCGCTG
AGTGTGAGGAAGCAGGTGGCTCTCTGGGCTTCCTCCAAAAATATCCTATGGCCAAGTGGGGC-TTGACGCCAGGATATTT
-TTCCCCTTCATGTGGCGACCATGGTGCCAACACGGCAAGAATGGTTGAGATATTTCAGTGGCCAGTGCTGACTATCCTT
CGGAAAACGATCTTTGTCCTGGGTGGAGTACTAAAGAAAGGTCGTTTGCTAAAAATAGAAATGAAAGGCCCCTAA-----
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------------------------TAAGAGATAAAAA-AAGTAAGGACGTTTGCTAAAAATAGAAAAAGAAGTGGCCAGT
GGTGACTGCTCGTTCGCTTGTGTCAGCGTGAGTGCATTTCCACCCGAGTGACGCGCCGCGTAGTCGCCGCGCTCGCGCCT
ATATATGCTTCCCCCGCCGCACTCCCATTTTCTCAGTAAAAACACCATCGCTCGGCCTGCTCAACCATCTCCACTAGCTC
TCGACTCAGATGGACGTCGCCGATGCTGCTTCCAGGTCCAGCCAGCAGGAGCA---GGGTCACAGGACCGTGTCGTCTGA
GCCGCCGAAGCGGCCGGCGGGGCGGACCAAGTTCCACGAGACGCGCCACCCGCTGTACCGCGGCGTGCGGCGCCGTGGCC
GGGT----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------CGGGCAGTGGGTGTGCGAGGTGCGCGTGCC
CAGGGTGAAGGGCTCCAGGCTCTGGCTCGGCACCTTCACCACCGCCGAGATGGCGGCGCGCGCGCACGACGCCGCGGTGC
TCGCGCTCTCCGGCCGCGCCGCCTGCCTCAACTTCGCCGACTCCGCATGGCGGATGCTGCCCGTGCTTGCGGCCGGGTCG
TTCGGCTTCCGCAGCGCGCGGGAGATCAAGCTTGCTGTC-GCCGTGGCCGTCGTCGCGTTCCAGCAGCAGCAG---AATA
TTC-----------------------------------------------------------------------------
----------CTCCAGCCGC------------------------------------------------------------
---------------------------------GTGTCCAACGGCGGAGCCGGCCGCCAGCCCGA---GCAACTCTCTGT
TCTACATGT------------CGTCTGGCGACCTGCTGGAGCTCGACGAGGAGCACTGGTTTGGCGGCATGGACGCCGGG
TCGTACTACGACAGCTTGGCGCAGGGGATGCTCGTGGAGCCGCCGGACGACAGAGCGAGGCGGGAGGACGTCGAGCAGAC
GGGCGTC---GAGACACCGACGCCGCTATGGAGCTATTTGTTTGACTAATTCAACACGCAGTGTAAAGTTGTCGATAG--
------TT--------------CTGTTTTGGGAAC-AAAGTGAGTAGGCAGTTTTTTTTT-----AACGTTGTAGTAGGC
AGTTTGA---AGCTCGCGGTTTCTACTTTTGTGAGAATGGGACCCTA---------------------------------
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>chr5B_609
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---------------------------------------------------------------CCTAGTGGACACCGCTG
AGTGTGAGGAAGCAGGTGGCTCTCTCGGCCTCCTCCAAAAA-ATCCTATGGCCAAGT-GGGC-TTGACGCCAGGATATTT
CTTCCCCTTCTTGTGGTGACCATGGTGCCAACACGGCAAGAATGAGCGAGATATTTCAGTGGCTAGTGCTGACTGTCCTT
CAGAAAACGACCTTTGTCCTGGTG-------------GAGGACGTTTGCTAAAAATAGAAATGAAAGGTCCCTAAAAGAT
A-------------------------------------------------------------------------------
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--------------------------------AAAAG-AAGAAAGGACATTTGCTAAAAATAGAAAAAGATGTGGCCAGT
GCTGACTGCTTGCTCGCTTGTGTCAGCGTGAGTGCATTTCCACCCGAGTGACGCGCTGGGTAGTCGCCGCCCTCTCG-CT
ATATATGCTTCCCGCGCCGCACTCCCATCCTCTCAGTAAAAACACCATCGCTCAACCTGCTCAACCATCTCCACTAGCTC
TCCACTCAGATGGACGTCGCCGACGCTGCCTCCAAGTCCGGCCACCAGGAGCA---GGGTCACAGGACGGTGTCATCGGA
GCCGCCGAAGCGGCCGGCGGGGCGGACCAAGTTCCGTGAGACACGACACCCGCTGTACCGCGGCGTGCGGCGCCGTGGCC
GGGT----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------CGGGCAGTGGGTGTGCGAGGTGCGCGTGCC
AGGAGTGAAGGGCTCCAGGCTCTGGCTCGGCACCTTCACCACCGCCGAGATGGCGGCGCGCGCGCACGACGCCGCGGTGC
TCGCGCTCTCCGGCCGCGCCGCCTGCCTCAACTTCGCCGACTCCGCATGGCGGATGCTGCCCGTGCTCGCGGCCGGGTCG
TTCGGCTTCGGCAGCGCGCGGGAGATCAAGCTTGCCGTCAGCCGTCGCCGTCGTCGCGTTCCAGCTGCAGCAG---AATA
TTC-----------------------------------------------------------------------------
----------CTCCAGCCGC------------------------------------------------------------
---------------------------------GTGTCCAACGGTGGAGCCGACCGACAGCCCGA---GCAACTCTCTGT
TCTACATGT------------CGTCCGGCGACCTGCTGGAGCTCGACGAGGAGCACTGGTTTGGCGGCATGGATGCCGGG
TCGTACTACGACAGCTTGGCGCAGGGGATGCTCGTGGAGCCGCCGGACGACAGAGCGAGGCGGGAGGACGCCGAGCAGAC
GGGCGTC---GAGACACCGACGCCGCTATGGAGCTATTTGTTTGACTAATTCAGCACGCAGTGTAAAGTTGTCGATAG--
------TTCTGTTGTGTTCTTCCCGATCTGGGAAC-AAACTGAGTAGGCAGTTTTTTTTT---TGAACGTTGTAGTAGGC
AGTTTGA---AGCTCCCGGTTTCTACTTTTGTGAGAATTGGACCCTAAG-----ATTGCTCATCATTGTTATTTCTCAAT
TACTGGTATTGAACTCGAGTGTTTGTCGTGCGGACACTCCACAAATCTCAATCAAATATTTTATGATGAAGAAAATCAAA
CATATCA-------------------------------------------------------------------------
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>chr5D_1022
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------------------------------------------------------ACCTGCTCAACCGTCTCCACTAGCGC
TCGGCCAAGATGGACGTCGCCGACGCCGCCTCCCCGTCTGGCCAGGACCAGCA---GGGGCACAGGACGGTGTCGTCTGA
GCCGCCGAAGCGCCCCGCGGGGCGGACCAAGGTCCATGAGACGCGCCACCCGCTGTACCGCGGCGTGCGGCAGCGGGGAC
GGGT----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------CGGGCAGTGGGTGTGCGAGGTGCGCGTGCC
TGGGGTGAAGGGCTCCAGGCTCTGGCTCGGCACCTTCACCACCGCCGAGATGGCGGCGCGCGCGCACGACGCCGCCGTGC
TCGCGCTCTCCGGCCGCGCTGCCTGCCTCAACTTCGCCGACTCCGCATGGCGCATGCTGCCCGTCCTCGCGCCCGGGTCG
TTCGGCTTCGGCAGCGCGCGCGAGATCAAGGCCGCCGTC-GCCGTCGCCGTCGTGGCGTTCAAGAAGCAGCAG---ATTA
TCC---CAGTGGCCGTCGCCGTCGTGGCGCTACAGAAGCAGCAGATTATCCCAGTGGCCGTCGCCGTCGTGGCGCTCCAG
AAGCAGCAGATTCCAGTCGCCGTCGCCCTCGTGGCGCTCCAGGAAAAGCAGATCCCAGTCGCCGTCGCCGTCGTGGCGCT
CCATCGGCAGCAGG---------TTCCAGTCGACGACCC---------GGCAACCTCCGGCCCGG---GCAGCGCTCTGT
TTTACATGT------------CCTCCAGCGACTTGTTGGAGCTCGACGAGGAGCAGTGGTTTGGCGGCATGGACGCCGGG
TCGTACTACGCGAGCTTGGCGCAGGGGATGCTCGTGGCACCGCCGGACGAAAGAGCGAGGCCGGAGGACGGCGAGCAGAG
CGGCGTC---CAGACGCCG-------------------------------------------------------------
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>chr5B_1033
--------------------------------------------------------------------------------
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-----------------------------------------------------------------CATCTCCGCTAGCTC
TCGACTCAGATGGACGTCGCCGACATCGCCTCCCGGTCCGGCCAGCAGGAGCA---GGGGCACCGAACGGTGTCGTCGGA
GCCGCCGAAGCGCCCTGCGGGGCGGACCAAGTTCCACGAGACGCGCCACCCGCTGTACCGCGGCGTGCGGCGCCGTGGCC
GCGT----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------CGGGCAGTGGGTGTGCGAGGTGCGCGTGCC
CGGGATCAAGGGCTCCAGGCTCTGGCTCGGCACCTTCAACACGGCCGAGATGGCGGCGCGCGCGCACGACGCCGCGGTGC
TCGCGCTCTCCGGCCGCGCCGCCTGCCTCAACTTCGCCGACTCCGCCTGGCGGATGCTGCCCGTGCTCGCGGCCGGCTCG
TTCGGCTTTGACAGCGCGCGGGAGATCAAGGCCGCCGTC-GCCGTGGCCGTCGTCGCGTTCCAGCGGAAGCAG---ATCA
TTC---CAGTCGCCGTCGCCGTCGTTGCGCTCCAGCAACAGCAGG---TTCCGGTCGCAGTGGCCGTGGTGGCGCTCCAG
CAGAAGCAGGTCCCGCTCGCCGTCGCCGTCGTGGCGCTCCAGCAGCTGCAGGTTCCGGTCGCCGTCGCCGTCGTGGCGCT
CCAGCAGCAGCAGCAGATCATTCTTCCAGTCGCGTGCCTGGCGCCGGA------------------------------GT
TTTACATGT------------CTTCCGGCGACCTGTTGGAGCTGGACGAGGAGCAGTGGTTTGGCGGCATGGAGGCCGGG
TCGTACTACGCGAGCTTGGCGCAGGGGATGCTCGTGGCGCCGCCGGACGAAAGAGCGAGGCCGGAGCACGGCGAGCAGAG
CGGCGTC---CAGACGCCA------CTATGGAGCTGCTTGTTCGACTAATTTAGCACT-ACTGCCAAGTTGTAGATAG--
------TCGCG-----CTCTTCCCGATTTGGGAAG-AAGCAGAGTAGGCAGTTTGTTCTTCA-------TTGTAGTACTA
GTATTTGTCGAGTTCCCGGTTTCTACTTTTGGGGAAAAGGGCTACTCCTGTGTAATTGCTTAATACAGA--------AAT
TATTGGTACTGAACTCGAGTGCGTATCGTGCA----CTCCATGAATCCACGTCAAA------------------------
--------------------------------------------------------------------------------
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>chr5A_1035
--------------------------------------------------------------------------------
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-------------------------------------------------------------------TCTCCGCCAGCTC
TCGACTCAGATGGACGTCGCCGACATCGCCTCCCCGTCCGGCCAGCAGGAGCA---GGGCCACCGGACGGTGTCGTCGGA
GCCGCCGAAGCGGCCCGCGGGGCGGACCAAGTTCCACGAGACGCGCCACCCGCTGTACCGCGGCGTGCGGCGCCGTGGCC
GCGT----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------CGGGCAGTGGGTGTGCGAGGTGCGCGTGCC
CGGGATCAAGGGCTCCAGGCTCTGGCTCGGCACCTTCAACACGGCCGAGATGGCGGCGCGCGCGCACGACGCCGCCGTGC
TCGCGCTCTCCGGCCGCGCCGCCTGCCTCAACTTCGCCGACTCCGCATGGCGCATGCTGCCCGTGCTCGCGGCCGGCTCC
TTCGGCTTCGGCAGCGCGAGCGAGATCAAGGCCGCCGTC-GCTGTCGCCGTCGTCGCGTTCCTGCGGAAGCAG---ATTG
TTCTTCCAGTCGCCGTCGCCGTCGTGGCGCTCCAGCAGAAGCAGG---TCCCGATCGCCGTCGCCGTGGTGGCGCTCCAG
CAGAAGCAGGTTCCGGTCGCCGTCGCCGTGGTGGCGCTCCAGAAGCTGCCAGTTCCGGTCGCCGTCGCCGTCGTGGCGCT
C---CAGCAGCAGCAGATCATTCTTCCAGTCGCGTGCCTGGCGCCCGA------------------------------GT
TTTACATGT------------CTTCCGGCGACCTGTTGGAGCTGGACGAGGAGCAGTGGTTTGGCGGCATGGAGGCCGGG
TCGTACTACGCGAGCTTGGCGCAGGGGATGCTCGTGGCGCCGCCGGACGAAAGAGCCAGGCCGGAGAGCGGCGAGCAGAG
CGGCGTC---CAGACGCCG------CTATGGAGCTGCTTGTTCGACTAATTTAGCGAT-ACTGTCAAGTTGTAGATAG--
------TCGCC-----TTCTTCTCGATTTGGGAAGCGAGCAGAGTAG---------------------------------
--------------------------------------------------------------------------------
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>chr5D_1035
--------------------------------------------------------------------------------
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-------------------------------------------------------------------TCTCCGCCAGCTC
TCGACTCAGATGGACGTCGCCGACATCGCCTCCCCGTCTGGCCAGCAGGGGCATCGGGGACACCGGACGGTGTCGTCGGA
GCCGCCGAAGCGCCCCGCGGGGCGGACCAAGTTCCACGAGACGCGCCACCCGCTGTACCGCGGCGTGCGGCGCCGTGGCC
GCGT----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------CGGGCAGTGGGTGTGCGAGGTGCGCGTGCC
TGGGATCAAGGGCTCCAGGCTCTGGCTCGGCACCTTCAACACGGCCGAGATGGCGGCGCGCGCGCACGACGCCGCTGTGC
TCGCGCTCATCGGCCGCGCCGCCTGCCTCAACTTCGCCGACTCCGCATGGCGCATGCTGCCCGTGCTCGCGGCCGGGTCG
TTCGGTTTCGGCAGCGCGAGCGAGATCAAGGCCGCCGTC-GCCGTGGCCGTCGTCGCGTTCCAGCGGAAGCAG---ATTA
TTC---CGGTCGCCGTCGCCGTCGTGGCGCTCCAGCAGCAGCAGG---TTCCGGTCGCCGTCGCCGTCGTGGCGCTCCAG
CAGAAGCAGGTTCCGGTCGCCGTGGCCGTCGTGGCGCTCCAGCAGCTGCAGGTTCCGGTCGCCGTGGCCGTCGTGGCGCT
C---CAGCAGCAGCAGATTATTCTTCCAGTCGCGTGCCTGGCGCCGGA------------------------------GT
TTTACATGT------------CTTCCGGCGACCTGTTGGAGCTTGACGAGGAGCAGTGGTTTGGCGGCATGGACGCTGGG
TCGTACTACGCGAGCTTGGCGCAGGGGATGCTCGTGGCGCCGCCGGACGAAAGAGCGAGGCCGGAGCACGGCGAGCAGAG
CGGCGTC---CAGACGCCG------CTATGGAGCTGCTTGCTCGACTAATTTAGAACT-ACTTTCAAGTTGTAGAT----
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>chr5A_1083
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-----------------------------------GTCTGGTCAGGAGGAGCA---GCGGCACAGGACGGTGAGGTCGGA
GCCGCCGAAGCGGCCCGCGGGGCGGACCAAGTTCCAGGAGACGCGCCACCCGCTGTACCGCGGCGTGCGCCAGCGGGGGC
CCGC----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------CGGGCGGTGGGTCTGCGAGGTGCGCGTGCT
CGGGATGAGGGGCTCCAGGCTCTGGCTCGGCACCTTCGTCACCGCCGAGATGGCGGCGCGCGCCCACGACGCCGCCGTGC
TCGCGCTCTCCGGCCGCAAAGCCTGCCTCAACTTCGCCGACTCCGCCTGGCGGATGCTGCCTGTGCTCGCGGCCGGCTCC
TTCGGCTTCGGCAGCGCGCGGGAGATCAAGACCGCCGTC-GCCGTCGCCGTCCTCGCGTTCCAGCGGCAGCAG---ATCG
TTC-----------------------------------------------------------------------------
----------TTCCAGCCGC------------------------------------------------------------
---------------------------------GTGCCCGGCGGCGGAGCCGGCCGTCGCCCCGA---GCGGCGCGCTGT
TCTCCATGT------------CGTCAGGCGACTTGCTGGAGCTCGACGACGAGGAGTGGTTTGGCGGCATGGTTGCCGGG
TCGTACTACGAGAGCTTGGCGCAGGGGATGCTCGTGGAGCCGCCGGACGCCGGAGCCTGGCGAGAGGACAGCGAGCACAG
CGGCGTGGCGGAGACGCAGACGCCGTTGTGGAGCTA--------------------------------------------
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>chr5D_1083
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-----------------------------------GTCTGGTCAGCAGGAGCA---GCGGCACAGGACGGTGAGGTCGGA
GCCGCCGAAGCGCCCCGCGGGGCGGACCAAGTTCCACGAGACGCGCCACCCGCTGTACCGCGGCGTGCGCCAGCGGGGCC
CCGC----------------------------------------------------------------------------
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--------------------------------------------------CGGGCGGTGGGTCTGCGAGGTGCGCGTGCT
CGGGATGAGGGGCTCCAGGCTCTGGCTCGGCACCTTCGTCACCGCCGAGATGGCGGCGCGCGCCCACGACGCCGCCGTGC
TCGCGCTCTCCGGCCGCAAAGCCTGCCTCAACTTCGCCGACTCCGCCTGGCGGATGCTGCCCGTGCTCGCGGCCGGCTCC
TTCGGCTTCGGCAGCGCGCGGGAGATCAAGACCGCCGTC-GCCGTCGCCGTCCTCGCGTTCCAGCGGCAGAAG---ATTG
TTC-----------------------------------------------------------------------------
----------TTCCCGTCGC------------------------------------------------------------
---------------------------------GTGCCCGGCGGCAGAGCCGGCCGTCGTCCCGAAGAGCGGCGCGCTCT
TCTCCATGT------------CCTCCGGCGACTTGTTGGAGCTCGACGACGAGCAGTGGTTCGGCGGCATGGTCGCCGGG
TCGTACTACGAGAGCTTGGCGCAGGGGATGCTGGTGGAGCCGCCGGACGCCGGAGCGTGGCGAGAGCAGAGCGAGCACAG
CGGCGTGGCGGAGACGCAGACGCCGTTGTGGGGCTAATCGTTCAGCTAA--------GCAGAGCACAGTTGTACTGTACA
TAGTTGTTGTGTTGTGTTCTTCCCAATTTGGGAAG-AAACAGAGTAGGCAGTT---------------------------
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>chr5B_1100
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----------------------------------------------------A---GGGGCACAGGACGGTGTGCTCCGA
GCCGCCCAAGAGGCCGGCAGGGCGGACCAAGTTTAAGGAGACGCGCCACCCGCTGTACCGCGGCGTGCGGCGGCGGGGCC
GGCT----------------------------------------------------------------------------
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--------------------------------------------------CGGGCAGTGGGTGTGCGAGGTGCGCGTGCG
CGGCGCGCAAGGGTACAGGCTCTGGCTCGGCACCTTCACCACCGCCGAGATGGCGGCGCGCGCTCACGACTCCGCCGTGC
TCGCGCTCCTCGACCGCGCCGCCTGCCTCAACTTCGCCGACTCCGCCTGGCGGATGCTGCCCGTCCTCGCGGCTGGCTCG
TCCCGCTTCAGCAGCGCGCGGGAGATCAAGGACGCGGTC-GCCATCGCCATCGTGGAGTTCCAGCGGCAGCGC-------
--------------------------------------------------------------------------------
------------CCCGTCGT------------------------------------------------------------
---------------------------------GTCCACGTCGGAGACGCACGACGGCGAGAAGGACGTCCAAGGCTCGC
CGACGCTGAGCGAGCTGTCCACGTCCAGCGACTTGTTG---------GACGAGCACTGGTTTGGCGGCATGGACGCCGGC
TCGTACTACGCGAGCTTGGCGCAGGGGATGCTCATGGAGCCGCCGTCCGCCAGAACGTGGAGCGAGGA------------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSS-------------S--S------------S-----------S-----------------------------------
------S--------SSS-SSS-SS-S------------------------S----------------------------
----------------------------------S------------------------S-SS----S------------
-----S---------------------S----------------------------------------------------
----------------------------------------------------------------S---------------
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-----------------------------------S-S------------------------------------------
-----------------S---------------------------------------------S----------------
----------S---------------------------------------------S-----------------------
-----------------------------------------------S--------------------------------
---------------------------------S--------------------------S-------------------
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---------------------------------------------------------------------------SS---
------------------------------------------------------S-------------------------
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---------------------------S----------------------------------------------------
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-----------------------------------------------------S--------------------------
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---------S---------------------S------------------------------------------------
-----------------SSSSSSS-----------------------------------SS----------S--------
------S-----------S-----------------S-------------------S--------S------S-------
---S-----------S--------S--------S------S------S-----------------------S--------
-------------------------------S-----------------------S-------------------S----
----------S---------S----S---S-----------------S-----------------------------S--
--------------------------S--------------------S-----S--------------------------
----------------------------------------S---S-------------------------S---------
-------------------S--------S-S-------------S------------------S----------------
---------------------------------------SS-S--S----------------------------------
-----------------S-----S------------S-------------S-------------------S---------
---------S---------S----------------S--S-S---------S--------S------S------------
------------------SS-----------S--------------------------------S--S------------
-------------------------------------S-------S-------
>forward_319
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-----------------------------------------------------------ACGAAATGGGTCGCCTCATT-
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>reverse_4076
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---------------------------------------------------------------------------ATCCC
AATGTTGAACGCCGA-----------------------------------------------------------------
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