Multiple sequence alignment - TraesCS5A01G285800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G285800 chr5A 100.000 3583 0 0 1 3583 493808082 493804500 0.000000e+00 6617.0
1 TraesCS5A01G285800 chr5A 89.375 160 12 5 2139 2296 452283280 452283436 2.820000e-46 196.0
2 TraesCS5A01G285800 chr5A 82.297 209 33 1 395 599 620285351 620285143 1.020000e-40 178.0
3 TraesCS5A01G285800 chr5A 91.011 89 6 2 669 756 548988756 548988669 6.280000e-23 119.0
4 TraesCS5A01G285800 chr5A 90.805 87 8 0 667 753 655793763 655793849 2.260000e-22 117.0
5 TraesCS5A01G285800 chr5B 92.291 1362 59 19 762 2095 470521806 470520463 0.000000e+00 1892.0
6 TraesCS5A01G285800 chr5B 86.813 637 65 6 1 618 470523782 470523146 0.000000e+00 693.0
7 TraesCS5A01G285800 chr5B 87.771 507 45 12 759 1256 470523155 470522657 8.630000e-161 577.0
8 TraesCS5A01G285800 chr5B 89.510 286 10 2 2303 2568 470520422 470520137 9.520000e-91 344.0
9 TraesCS5A01G285800 chr5B 88.235 85 10 0 669 753 572942229 572942313 6.330000e-18 102.0
10 TraesCS5A01G285800 chr5B 98.182 55 1 0 2767 2821 470520133 470520079 2.940000e-16 97.1
11 TraesCS5A01G285800 chr5D 91.680 1262 55 12 853 2095 390453201 390451971 0.000000e+00 1703.0
12 TraesCS5A01G285800 chr5D 89.671 639 60 5 2949 3583 434828989 434828353 0.000000e+00 809.0
13 TraesCS5A01G285800 chr5D 86.723 595 45 10 2303 2874 390451930 390451347 6.530000e-177 630.0
14 TraesCS5A01G285800 chr5D 87.931 174 21 0 382 555 487597583 487597756 4.690000e-49 206.0
15 TraesCS5A01G285800 chr5D 95.122 82 4 0 2867 2948 390447218 390447137 2.900000e-26 130.0
16 TraesCS5A01G285800 chr7A 91.304 644 47 6 2948 3583 96056810 96057452 0.000000e+00 870.0
17 TraesCS5A01G285800 chr7A 88.068 176 19 2 2125 2299 372364443 372364617 1.300000e-49 207.0
18 TraesCS5A01G285800 chr7A 89.024 164 17 1 2139 2301 172915873 172916036 6.070000e-48 202.0
19 TraesCS5A01G285800 chr7A 92.553 94 6 1 669 762 654511164 654511256 2.240000e-27 134.0
20 TraesCS5A01G285800 chr7D 90.156 640 55 6 2948 3581 484347982 484347345 0.000000e+00 826.0
21 TraesCS5A01G285800 chr7D 87.970 266 29 3 1 264 618243963 618243699 9.660000e-81 311.0
22 TraesCS5A01G285800 chr7D 85.354 198 29 0 382 579 413129205 413129008 4.690000e-49 206.0
23 TraesCS5A01G285800 chr7D 91.304 92 8 0 669 760 60705913 60706004 3.760000e-25 126.0
24 TraesCS5A01G285800 chr2A 86.698 639 76 5 2949 3583 759040803 759040170 0.000000e+00 701.0
25 TraesCS5A01G285800 chr2A 88.679 159 17 1 2139 2296 35678344 35678502 3.650000e-45 193.0
26 TraesCS5A01G285800 chr2A 88.272 162 18 1 2139 2299 519403839 519404000 3.650000e-45 193.0
27 TraesCS5A01G285800 chr2A 88.272 162 18 1 2139 2299 576447371 576447532 3.650000e-45 193.0
28 TraesCS5A01G285800 chr2A 85.393 178 23 3 390 565 511074640 511074464 7.900000e-42 182.0
29 TraesCS5A01G285800 chr3B 86.519 586 68 8 2941 3522 815861456 815862034 5.050000e-178 634.0
30 TraesCS5A01G285800 chr3A 86.403 581 66 10 2950 3526 750257937 750258508 1.090000e-174 623.0
31 TraesCS5A01G285800 chr3A 85.786 598 68 12 2949 3538 588516287 588516875 5.080000e-173 617.0
32 TraesCS5A01G285800 chr3A 88.820 161 16 2 2139 2298 76343790 76343631 2.820000e-46 196.0
33 TraesCS5A01G285800 chr3A 88.024 167 17 3 2139 2304 534103711 534103875 1.020000e-45 195.0
34 TraesCS5A01G285800 chr3A 92.553 94 7 0 667 760 702006908 702007001 6.240000e-28 135.0
35 TraesCS5A01G285800 chr4B 85.216 602 68 14 2947 3539 601931966 601932555 1.840000e-167 599.0
36 TraesCS5A01G285800 chr1D 85.420 583 70 10 2948 3522 299813276 299812701 3.080000e-165 592.0
37 TraesCS5A01G285800 chr1D 84.412 340 33 6 3 323 439248692 439249030 2.080000e-82 316.0
38 TraesCS5A01G285800 chr1A 82.222 495 62 12 1624 2095 32994503 32994994 1.550000e-108 403.0
39 TraesCS5A01G285800 chr1A 89.231 130 12 1 1651 1778 103553863 103553734 1.030000e-35 161.0
40 TraesCS5A01G285800 chr1A 94.444 90 4 1 669 758 547680283 547680195 1.730000e-28 137.0
41 TraesCS5A01G285800 chr1A 93.333 90 6 0 669 758 445407666 445407577 2.240000e-27 134.0
42 TraesCS5A01G285800 chr1A 91.209 91 8 0 669 759 34382214 34382304 1.350000e-24 124.0
43 TraesCS5A01G285800 chr1A 90.278 72 7 0 687 758 569464255 569464326 1.060000e-15 95.3
44 TraesCS5A01G285800 chr1A 95.833 48 2 0 670 717 90176649 90176602 1.070000e-10 78.7
45 TraesCS5A01G285800 chr6B 85.044 341 31 6 2 323 667069716 667069377 2.670000e-86 329.0
46 TraesCS5A01G285800 chr6B 83.486 218 31 3 387 599 498671081 498670864 7.850000e-47 198.0
47 TraesCS5A01G285800 chr3D 84.866 337 31 6 6 323 609868 609533 4.460000e-84 322.0
48 TraesCS5A01G285800 chr3D 84.570 337 32 6 6 323 82425907 82425572 2.080000e-82 316.0
49 TraesCS5A01G285800 chr3D 84.431 334 32 6 9 323 580361328 580360996 9.660000e-81 311.0
50 TraesCS5A01G285800 chr2D 88.302 265 27 4 3 264 621088755 621089018 7.470000e-82 315.0
51 TraesCS5A01G285800 chr2D 83.178 214 29 6 338 546 376049581 376049792 4.720000e-44 189.0
52 TraesCS5A01G285800 chrUn 84.431 334 32 6 9 323 259422980 259422648 9.660000e-81 311.0
53 TraesCS5A01G285800 chr6A 88.272 162 17 2 2139 2299 604910391 604910231 3.650000e-45 193.0
54 TraesCS5A01G285800 chr6A 83.770 191 29 2 386 575 606624345 606624156 2.840000e-41 180.0
55 TraesCS5A01G285800 chr6A 87.692 130 14 1 1651 1778 583497160 583497031 2.230000e-32 150.0
56 TraesCS5A01G285800 chr6A 97.959 49 1 0 669 717 187857367 187857319 6.370000e-13 86.1
57 TraesCS5A01G285800 chr4D 87.730 163 17 3 386 546 484333462 484333301 1.700000e-43 187.0
58 TraesCS5A01G285800 chr4D 78.571 140 27 3 765 903 502633526 502633389 4.930000e-14 89.8
59 TraesCS5A01G285800 chr2B 92.391 92 6 1 669 760 234630718 234630808 2.900000e-26 130.0
60 TraesCS5A01G285800 chr1B 91.765 85 7 0 669 753 499895297 499895381 6.280000e-23 119.0
61 TraesCS5A01G285800 chr7B 90.110 91 7 1 669 759 130814602 130814690 2.260000e-22 117.0
62 TraesCS5A01G285800 chr7B 94.643 56 3 0 669 724 105520723 105520668 1.770000e-13 87.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G285800 chr5A 493804500 493808082 3582 True 6617.00 6617 100.0000 1 3583 1 chr5A.!!$R1 3582
1 TraesCS5A01G285800 chr5B 470520079 470523782 3703 True 720.62 1892 90.9134 1 2821 5 chr5B.!!$R1 2820
2 TraesCS5A01G285800 chr5D 390451347 390453201 1854 True 1166.50 1703 89.2015 853 2874 2 chr5D.!!$R3 2021
3 TraesCS5A01G285800 chr5D 434828353 434828989 636 True 809.00 809 89.6710 2949 3583 1 chr5D.!!$R2 634
4 TraesCS5A01G285800 chr7A 96056810 96057452 642 False 870.00 870 91.3040 2948 3583 1 chr7A.!!$F1 635
5 TraesCS5A01G285800 chr7D 484347345 484347982 637 True 826.00 826 90.1560 2948 3581 1 chr7D.!!$R2 633
6 TraesCS5A01G285800 chr2A 759040170 759040803 633 True 701.00 701 86.6980 2949 3583 1 chr2A.!!$R2 634
7 TraesCS5A01G285800 chr3B 815861456 815862034 578 False 634.00 634 86.5190 2941 3522 1 chr3B.!!$F1 581
8 TraesCS5A01G285800 chr3A 750257937 750258508 571 False 623.00 623 86.4030 2950 3526 1 chr3A.!!$F4 576
9 TraesCS5A01G285800 chr3A 588516287 588516875 588 False 617.00 617 85.7860 2949 3538 1 chr3A.!!$F2 589
10 TraesCS5A01G285800 chr4B 601931966 601932555 589 False 599.00 599 85.2160 2947 3539 1 chr4B.!!$F1 592
11 TraesCS5A01G285800 chr1D 299812701 299813276 575 True 592.00 592 85.4200 2948 3522 1 chr1D.!!$R1 574

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
660 680 0.039764 TCTCACACGAGACCCATCCT 59.960 55.0 0.00 0.0 43.55 3.24 F
719 739 0.108138 CCATCAAGACGGGTCTCACC 60.108 60.0 1.16 0.0 39.39 4.02 F
917 2273 0.110688 CTCACGATTGGTTGTGCACG 60.111 55.0 13.13 0.0 39.23 5.34 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1828 3204 0.034896 GCGTTGACTCCCTCTTTGGA 59.965 55.0 0.0 0.0 38.35 3.53 R
2248 3647 0.108756 GTTAGCAGGTGAGACCCGTC 60.109 60.0 0.0 0.0 39.75 4.79 R
2893 4335 0.250234 TTACTCGAATGCTGGCAGCT 59.750 50.0 36.5 20.7 42.97 4.24 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
40 41 1.166531 AGCAAGGCAGAACACCGAAC 61.167 55.000 0.00 0.00 0.00 3.95
71 72 1.228657 AACGAAGGCGCTGAAACCTC 61.229 55.000 7.64 0.00 42.48 3.85
101 102 2.070783 CAAAAGGATGCAACACCATGC 58.929 47.619 9.88 0.00 46.58 4.06
122 123 1.774856 CCCCGGTCAAGGATAGGAATT 59.225 52.381 0.00 0.00 0.00 2.17
132 133 2.438021 AGGATAGGAATTGCCAACGCTA 59.562 45.455 0.00 0.00 40.02 4.26
136 137 1.818674 AGGAATTGCCAACGCTAAAGG 59.181 47.619 0.00 0.00 40.02 3.11
140 141 4.629779 GCCAACGCTAAAGGCCTA 57.370 55.556 5.16 0.00 42.58 3.93
165 166 2.054453 GCATTGAGGCAAGGACCCC 61.054 63.158 0.00 0.00 0.00 4.95
167 168 0.251742 CATTGAGGCAAGGACCCCAA 60.252 55.000 0.00 0.00 0.00 4.12
179 181 3.411517 CCCCAATCCCTCGCACCT 61.412 66.667 0.00 0.00 0.00 4.00
180 182 2.124570 CCCAATCCCTCGCACCTG 60.125 66.667 0.00 0.00 0.00 4.00
182 184 2.046023 CAATCCCTCGCACCTGCA 60.046 61.111 0.00 0.00 42.21 4.41
206 208 2.125766 GAACCCTCCACACCTGGACC 62.126 65.000 0.00 0.00 42.15 4.46
207 209 3.330720 CCCTCCACACCTGGACCC 61.331 72.222 0.00 0.00 42.15 4.46
210 212 1.990060 CTCCACACCTGGACCCGAT 60.990 63.158 0.00 0.00 42.15 4.18
222 224 1.416401 GGACCCGATTAGGATGCTGAA 59.584 52.381 0.00 0.00 45.00 3.02
238 240 4.645535 TGCTGAAGATGATATTAGGCCAC 58.354 43.478 5.01 0.00 0.00 5.01
244 246 4.330250 AGATGATATTAGGCCACACATGC 58.670 43.478 5.01 0.00 0.00 4.06
251 253 3.762247 GCCACACATGCCGCCATT 61.762 61.111 0.00 0.00 0.00 3.16
264 266 1.865788 CGCCATTGAACCACACCCAG 61.866 60.000 0.00 0.00 0.00 4.45
265 267 0.539438 GCCATTGAACCACACCCAGA 60.539 55.000 0.00 0.00 0.00 3.86
266 268 1.538047 CCATTGAACCACACCCAGAG 58.462 55.000 0.00 0.00 0.00 3.35
267 269 0.883833 CATTGAACCACACCCAGAGC 59.116 55.000 0.00 0.00 0.00 4.09
270 272 1.380302 GAACCACACCCAGAGCCAT 59.620 57.895 0.00 0.00 0.00 4.40
272 274 1.136329 AACCACACCCAGAGCCATCT 61.136 55.000 0.00 0.00 35.63 2.90
298 313 4.437682 TGACACTTTCAGGAAGGAACAT 57.562 40.909 0.00 0.00 39.79 2.71
319 334 0.662970 CCACCAAAATGCCGTTGTCG 60.663 55.000 0.00 0.00 0.00 4.35
330 345 1.081509 CGTTGTCGCCACCCAAATG 60.082 57.895 0.00 0.00 0.00 2.32
331 346 1.791103 CGTTGTCGCCACCCAAATGT 61.791 55.000 0.00 0.00 0.00 2.71
332 347 0.387565 GTTGTCGCCACCCAAATGTT 59.612 50.000 0.00 0.00 0.00 2.71
341 356 3.716601 CCACCCAAATGTTGTTGTCTTC 58.283 45.455 0.00 0.00 0.00 2.87
343 358 2.223711 ACCCAAATGTTGTTGTCTTCGC 60.224 45.455 0.00 0.00 0.00 4.70
344 359 2.393764 CCAAATGTTGTTGTCTTCGCC 58.606 47.619 0.00 0.00 0.00 5.54
351 366 0.103390 TGTTGTCTTCGCCGAACTCA 59.897 50.000 0.00 0.00 0.00 3.41
353 368 1.798813 GTTGTCTTCGCCGAACTCAAT 59.201 47.619 12.64 0.00 0.00 2.57
369 384 4.211125 ACTCAATGCGAAGATAGAGGAGA 58.789 43.478 0.00 0.00 0.00 3.71
383 398 1.992277 GGAGAAGGAGGCCAGAGCA 60.992 63.158 5.01 0.00 42.56 4.26
384 399 1.557269 GGAGAAGGAGGCCAGAGCAA 61.557 60.000 5.01 0.00 42.56 3.91
420 440 1.519719 GGAGCCGAGCACTGAGATT 59.480 57.895 0.00 0.00 0.00 2.40
423 443 0.322975 AGCCGAGCACTGAGATTGTT 59.677 50.000 0.00 0.00 0.00 2.83
424 444 0.445436 GCCGAGCACTGAGATTGTTG 59.555 55.000 0.00 0.00 0.00 3.33
434 454 3.511540 ACTGAGATTGTTGACATCTCCGA 59.488 43.478 14.93 4.05 39.90 4.55
435 455 4.161189 ACTGAGATTGTTGACATCTCCGAT 59.839 41.667 14.93 0.00 39.90 4.18
484 504 6.768078 AGTACGTAGGTTTATTTCATTTGCG 58.232 36.000 0.00 0.00 0.00 4.85
487 507 5.049267 ACGTAGGTTTATTTCATTTGCGTGT 60.049 36.000 0.00 0.00 0.00 4.49
508 528 7.429340 GCGTGTCTTTGTATGGATTTAAGAATG 59.571 37.037 0.00 0.00 0.00 2.67
527 547 7.834881 AGAATGTAGTATAAGATGTCCGGAA 57.165 36.000 5.23 0.00 0.00 4.30
552 572 4.609691 ACTCGTGAAATTTGAAACGTGT 57.390 36.364 14.56 14.56 37.77 4.49
555 575 3.374367 TCGTGAAATTTGAAACGTGTCCA 59.626 39.130 2.58 0.00 37.32 4.02
560 580 3.963383 ATTTGAAACGTGTCCAGTCAC 57.037 42.857 2.58 0.00 35.28 3.67
562 582 3.804786 TTGAAACGTGTCCAGTCACTA 57.195 42.857 2.58 0.00 36.33 2.74
563 583 3.088194 TGAAACGTGTCCAGTCACTAC 57.912 47.619 2.58 0.00 36.33 2.73
565 585 1.405872 AACGTGTCCAGTCACTACCA 58.594 50.000 0.00 0.00 36.33 3.25
566 586 1.405872 ACGTGTCCAGTCACTACCAA 58.594 50.000 0.00 0.00 36.33 3.67
608 628 2.615912 GACATTTGAGGGCTGTAGATGC 59.384 50.000 0.00 0.00 0.00 3.91
609 629 2.240667 ACATTTGAGGGCTGTAGATGCT 59.759 45.455 0.00 0.00 0.00 3.79
610 630 2.698855 TTTGAGGGCTGTAGATGCTC 57.301 50.000 0.00 0.00 0.00 4.26
611 631 1.871418 TTGAGGGCTGTAGATGCTCT 58.129 50.000 0.00 0.00 44.97 4.09
612 632 2.755952 TGAGGGCTGTAGATGCTCTA 57.244 50.000 0.00 0.00 41.95 2.43
613 633 3.032265 TGAGGGCTGTAGATGCTCTAA 57.968 47.619 0.00 0.00 41.95 2.10
614 634 2.695666 TGAGGGCTGTAGATGCTCTAAC 59.304 50.000 0.00 0.00 41.95 2.34
615 635 1.683917 AGGGCTGTAGATGCTCTAACG 59.316 52.381 0.00 0.00 39.81 3.18
616 636 1.681793 GGGCTGTAGATGCTCTAACGA 59.318 52.381 0.00 0.00 29.58 3.85
617 637 2.287909 GGGCTGTAGATGCTCTAACGAG 60.288 54.545 0.00 0.00 40.35 4.18
618 638 2.287909 GGCTGTAGATGCTCTAACGAGG 60.288 54.545 0.00 0.00 37.75 4.63
619 639 2.619177 GCTGTAGATGCTCTAACGAGGA 59.381 50.000 0.00 0.00 42.06 3.71
620 640 3.066900 GCTGTAGATGCTCTAACGAGGAA 59.933 47.826 0.00 0.00 41.15 3.36
621 641 4.440250 GCTGTAGATGCTCTAACGAGGAAA 60.440 45.833 0.00 0.00 41.15 3.13
622 642 5.651530 CTGTAGATGCTCTAACGAGGAAAA 58.348 41.667 0.00 0.00 41.15 2.29
623 643 5.651530 TGTAGATGCTCTAACGAGGAAAAG 58.348 41.667 0.00 0.00 41.15 2.27
624 644 5.417894 TGTAGATGCTCTAACGAGGAAAAGA 59.582 40.000 0.00 0.00 41.15 2.52
625 645 5.407407 AGATGCTCTAACGAGGAAAAGAA 57.593 39.130 0.00 0.00 41.15 2.52
626 646 5.983540 AGATGCTCTAACGAGGAAAAGAAT 58.016 37.500 0.00 0.00 41.15 2.40
627 647 6.410540 AGATGCTCTAACGAGGAAAAGAATT 58.589 36.000 0.00 0.00 41.15 2.17
628 648 6.536941 AGATGCTCTAACGAGGAAAAGAATTC 59.463 38.462 0.00 0.00 41.15 2.17
629 649 5.794894 TGCTCTAACGAGGAAAAGAATTCT 58.205 37.500 0.88 0.88 34.43 2.40
630 650 6.931838 TGCTCTAACGAGGAAAAGAATTCTA 58.068 36.000 8.75 0.00 34.43 2.10
631 651 7.556844 TGCTCTAACGAGGAAAAGAATTCTAT 58.443 34.615 8.75 0.41 34.43 1.98
632 652 8.692710 TGCTCTAACGAGGAAAAGAATTCTATA 58.307 33.333 8.75 0.00 34.43 1.31
633 653 9.530633 GCTCTAACGAGGAAAAGAATTCTATAA 57.469 33.333 8.75 0.00 37.75 0.98
649 669 8.928270 AATTCTATAAAACTAGGTCTCACACG 57.072 34.615 0.00 0.00 0.00 4.49
650 670 7.692460 TTCTATAAAACTAGGTCTCACACGA 57.308 36.000 0.00 0.00 0.00 4.35
651 671 7.317842 TCTATAAAACTAGGTCTCACACGAG 57.682 40.000 0.00 0.00 40.98 4.18
652 672 7.108194 TCTATAAAACTAGGTCTCACACGAGA 58.892 38.462 0.00 0.00 46.28 4.04
659 679 2.579878 TCTCACACGAGACCCATCC 58.420 57.895 0.00 0.00 43.55 3.51
660 680 0.039764 TCTCACACGAGACCCATCCT 59.960 55.000 0.00 0.00 43.55 3.24
661 681 0.174389 CTCACACGAGACCCATCCTG 59.826 60.000 0.00 0.00 42.34 3.86
662 682 0.251608 TCACACGAGACCCATCCTGA 60.252 55.000 0.00 0.00 0.00 3.86
663 683 0.826715 CACACGAGACCCATCCTGAT 59.173 55.000 0.00 0.00 0.00 2.90
664 684 2.031870 CACACGAGACCCATCCTGATA 58.968 52.381 0.00 0.00 0.00 2.15
665 685 2.035193 CACACGAGACCCATCCTGATAG 59.965 54.545 0.00 0.00 0.00 2.08
666 686 2.091830 ACACGAGACCCATCCTGATAGA 60.092 50.000 0.00 0.00 0.00 1.98
667 687 2.959030 CACGAGACCCATCCTGATAGAA 59.041 50.000 0.00 0.00 0.00 2.10
668 688 3.384789 CACGAGACCCATCCTGATAGAAA 59.615 47.826 0.00 0.00 0.00 2.52
669 689 4.039730 CACGAGACCCATCCTGATAGAAAT 59.960 45.833 0.00 0.00 0.00 2.17
670 690 4.039730 ACGAGACCCATCCTGATAGAAATG 59.960 45.833 0.00 0.00 0.00 2.32
671 691 4.322567 GAGACCCATCCTGATAGAAATGC 58.677 47.826 0.00 0.00 0.00 3.56
672 692 3.979347 AGACCCATCCTGATAGAAATGCT 59.021 43.478 0.00 0.00 0.00 3.79
673 693 4.414846 AGACCCATCCTGATAGAAATGCTT 59.585 41.667 0.00 0.00 0.00 3.91
674 694 5.103771 AGACCCATCCTGATAGAAATGCTTT 60.104 40.000 0.00 0.00 0.00 3.51
675 695 4.891756 ACCCATCCTGATAGAAATGCTTTG 59.108 41.667 0.00 0.00 0.00 2.77
676 696 4.891756 CCCATCCTGATAGAAATGCTTTGT 59.108 41.667 0.00 0.00 0.00 2.83
677 697 5.221185 CCCATCCTGATAGAAATGCTTTGTG 60.221 44.000 0.00 0.00 0.00 3.33
678 698 5.591472 CCATCCTGATAGAAATGCTTTGTGA 59.409 40.000 0.00 0.00 0.00 3.58
679 699 6.264744 CCATCCTGATAGAAATGCTTTGTGAT 59.735 38.462 0.00 0.00 0.00 3.06
680 700 7.201884 CCATCCTGATAGAAATGCTTTGTGATT 60.202 37.037 0.00 0.00 0.00 2.57
681 701 7.707624 TCCTGATAGAAATGCTTTGTGATTT 57.292 32.000 0.00 0.00 0.00 2.17
682 702 7.541162 TCCTGATAGAAATGCTTTGTGATTTG 58.459 34.615 0.00 0.00 0.00 2.32
683 703 7.177216 TCCTGATAGAAATGCTTTGTGATTTGT 59.823 33.333 0.00 0.00 0.00 2.83
684 704 7.274904 CCTGATAGAAATGCTTTGTGATTTGTG 59.725 37.037 0.00 0.00 0.00 3.33
685 705 7.884257 TGATAGAAATGCTTTGTGATTTGTGA 58.116 30.769 0.00 0.00 0.00 3.58
686 706 8.358895 TGATAGAAATGCTTTGTGATTTGTGAA 58.641 29.630 0.00 0.00 0.00 3.18
687 707 9.362539 GATAGAAATGCTTTGTGATTTGTGAAT 57.637 29.630 0.00 0.00 0.00 2.57
689 709 8.524870 AGAAATGCTTTGTGATTTGTGAATAC 57.475 30.769 0.00 0.00 0.00 1.89
690 710 7.599998 AGAAATGCTTTGTGATTTGTGAATACC 59.400 33.333 0.00 0.00 0.00 2.73
691 711 5.781210 TGCTTTGTGATTTGTGAATACCA 57.219 34.783 0.00 0.00 0.00 3.25
692 712 5.527951 TGCTTTGTGATTTGTGAATACCAC 58.472 37.500 0.00 0.00 45.88 4.16
702 722 2.967362 GTGAATACCACGTGTCATCCA 58.033 47.619 15.65 4.02 35.86 3.41
703 723 3.531538 GTGAATACCACGTGTCATCCAT 58.468 45.455 15.65 0.00 35.86 3.41
704 724 3.555956 GTGAATACCACGTGTCATCCATC 59.444 47.826 15.65 4.13 35.86 3.51
705 725 3.196685 TGAATACCACGTGTCATCCATCA 59.803 43.478 15.65 6.65 0.00 3.07
706 726 3.904800 ATACCACGTGTCATCCATCAA 57.095 42.857 15.65 0.00 0.00 2.57
707 727 2.099141 ACCACGTGTCATCCATCAAG 57.901 50.000 15.65 0.00 0.00 3.02
708 728 1.623311 ACCACGTGTCATCCATCAAGA 59.377 47.619 15.65 0.00 0.00 3.02
709 729 2.002586 CCACGTGTCATCCATCAAGAC 58.997 52.381 15.65 0.00 0.00 3.01
710 730 1.655597 CACGTGTCATCCATCAAGACG 59.344 52.381 7.58 0.00 35.97 4.18
711 731 1.280982 CGTGTCATCCATCAAGACGG 58.719 55.000 0.00 0.00 35.09 4.79
712 732 1.656652 GTGTCATCCATCAAGACGGG 58.343 55.000 0.00 0.00 35.09 5.28
713 733 1.066143 GTGTCATCCATCAAGACGGGT 60.066 52.381 0.00 0.00 35.09 5.28
714 734 1.207089 TGTCATCCATCAAGACGGGTC 59.793 52.381 0.00 0.00 35.09 4.46
715 735 1.482593 GTCATCCATCAAGACGGGTCT 59.517 52.381 0.00 0.00 42.75 3.85
716 736 1.757118 TCATCCATCAAGACGGGTCTC 59.243 52.381 1.16 0.00 39.39 3.36
717 737 1.482182 CATCCATCAAGACGGGTCTCA 59.518 52.381 1.16 0.00 39.39 3.27
718 738 0.895530 TCCATCAAGACGGGTCTCAC 59.104 55.000 1.16 0.00 39.39 3.51
719 739 0.108138 CCATCAAGACGGGTCTCACC 60.108 60.000 1.16 0.00 39.39 4.02
720 740 0.898320 CATCAAGACGGGTCTCACCT 59.102 55.000 1.16 0.00 39.39 4.00
726 746 4.913126 CGGGTCTCACCTGCTAAC 57.087 61.111 0.00 0.00 37.90 2.34
727 747 1.218316 CGGGTCTCACCTGCTAACC 59.782 63.158 0.00 0.00 37.90 2.85
728 748 1.218316 GGGTCTCACCTGCTAACCG 59.782 63.158 0.00 0.00 38.64 4.44
729 749 1.542187 GGGTCTCACCTGCTAACCGT 61.542 60.000 0.00 0.00 38.64 4.83
730 750 1.180029 GGTCTCACCTGCTAACCGTA 58.820 55.000 0.00 0.00 34.73 4.02
731 751 1.547372 GGTCTCACCTGCTAACCGTAA 59.453 52.381 0.00 0.00 34.73 3.18
732 752 2.416972 GGTCTCACCTGCTAACCGTAAG 60.417 54.545 0.00 0.00 34.73 2.34
733 753 2.490903 GTCTCACCTGCTAACCGTAAGA 59.509 50.000 0.00 0.00 43.02 2.10
734 754 2.490903 TCTCACCTGCTAACCGTAAGAC 59.509 50.000 0.00 0.00 43.02 3.01
735 755 1.547372 TCACCTGCTAACCGTAAGACC 59.453 52.381 0.00 0.00 43.02 3.85
736 756 1.549170 CACCTGCTAACCGTAAGACCT 59.451 52.381 0.00 0.00 43.02 3.85
737 757 1.549170 ACCTGCTAACCGTAAGACCTG 59.451 52.381 0.00 0.00 43.02 4.00
738 758 1.822990 CCTGCTAACCGTAAGACCTGA 59.177 52.381 0.00 0.00 43.02 3.86
739 759 2.431057 CCTGCTAACCGTAAGACCTGAT 59.569 50.000 0.00 0.00 43.02 2.90
740 760 3.491104 CCTGCTAACCGTAAGACCTGATC 60.491 52.174 0.00 0.00 43.02 2.92
741 761 3.362706 TGCTAACCGTAAGACCTGATCT 58.637 45.455 0.00 0.00 40.46 2.75
743 763 4.951715 TGCTAACCGTAAGACCTGATCTTA 59.048 41.667 0.00 0.00 46.38 2.10
829 849 2.750237 GTGACGGTTGGATGGGGC 60.750 66.667 0.00 0.00 0.00 5.80
830 850 4.402528 TGACGGTTGGATGGGGCG 62.403 66.667 0.00 0.00 0.00 6.13
831 851 4.090588 GACGGTTGGATGGGGCGA 62.091 66.667 0.00 0.00 0.00 5.54
832 852 4.404098 ACGGTTGGATGGGGCGAC 62.404 66.667 0.00 0.00 0.00 5.19
835 855 4.090588 GTTGGATGGGGCGACGGA 62.091 66.667 0.00 0.00 0.00 4.69
836 856 3.781307 TTGGATGGGGCGACGGAG 61.781 66.667 0.00 0.00 0.00 4.63
837 857 4.770362 TGGATGGGGCGACGGAGA 62.770 66.667 0.00 0.00 0.00 3.71
838 858 3.917760 GGATGGGGCGACGGAGAG 61.918 72.222 0.00 0.00 0.00 3.20
839 859 2.833582 GATGGGGCGACGGAGAGA 60.834 66.667 0.00 0.00 0.00 3.10
882 902 1.940613 GATTCGTATTGCCAGGTGTCC 59.059 52.381 0.00 0.00 0.00 4.02
911 2267 1.276421 AGAGGGTCTCACGATTGGTTG 59.724 52.381 0.00 0.00 32.06 3.77
917 2273 0.110688 CTCACGATTGGTTGTGCACG 60.111 55.000 13.13 0.00 39.23 5.34
925 2281 1.079681 GGTTGTGCACGATCCGGTA 60.080 57.895 10.68 0.00 0.00 4.02
965 2323 0.615331 ACGACAGGCATCCACTTCAT 59.385 50.000 0.00 0.00 0.00 2.57
987 2345 2.727684 GCTTTCGACGGGAAGACGC 61.728 63.158 13.64 0.00 37.89 5.19
1069 2427 1.063327 CGAGACTCAGCTAGCCACG 59.937 63.158 12.13 2.09 0.00 4.94
1083 2441 1.599606 GCCACGCCTCTTCTCTCTCA 61.600 60.000 0.00 0.00 0.00 3.27
1091 2449 0.894184 TCTTCTCTCTCAACCGCCGT 60.894 55.000 0.00 0.00 0.00 5.68
1202 2566 4.354943 CCTCCCCCTGGTCCTGGT 62.355 72.222 13.43 0.00 0.00 4.00
1511 2875 1.725973 CGCGCGCTTCATCGATCTA 60.726 57.895 30.48 0.00 0.00 1.98
1534 2898 2.757868 AGTTCCACTACTCAGCTAGCTG 59.242 50.000 34.48 34.48 44.86 4.24
1537 2901 2.095461 CCACTACTCAGCTAGCTGACA 58.905 52.381 37.64 27.21 46.80 3.58
1546 2910 2.871022 CAGCTAGCTGACAATCCATGAC 59.129 50.000 36.47 0.00 46.30 3.06
1551 2915 1.679680 GCTGACAATCCATGACCCATG 59.320 52.381 0.00 0.00 41.10 3.66
1552 2916 2.684630 GCTGACAATCCATGACCCATGA 60.685 50.000 8.38 0.00 43.81 3.07
1553 2917 2.947652 CTGACAATCCATGACCCATGAC 59.052 50.000 8.38 0.00 43.81 3.06
1554 2918 2.301346 GACAATCCATGACCCATGACC 58.699 52.381 8.38 0.00 43.81 4.02
1556 2920 1.063792 CAATCCATGACCCATGACCCA 60.064 52.381 8.38 0.00 43.81 4.51
1558 2922 0.846015 TCCATGACCCATGACCCATC 59.154 55.000 8.38 0.00 43.81 3.51
1559 2923 0.535780 CCATGACCCATGACCCATCG 60.536 60.000 8.38 0.00 43.81 3.84
1560 2924 0.469494 CATGACCCATGACCCATCGA 59.531 55.000 0.00 0.00 43.81 3.59
1561 2925 1.072806 CATGACCCATGACCCATCGAT 59.927 52.381 0.00 0.00 43.81 3.59
1562 2926 0.758734 TGACCCATGACCCATCGATC 59.241 55.000 0.00 0.00 0.00 3.69
1827 3203 1.446792 CGCTGAAGAGACGGTGCAT 60.447 57.895 0.00 0.00 0.00 3.96
1828 3204 1.016130 CGCTGAAGAGACGGTGCATT 61.016 55.000 0.00 0.00 0.00 3.56
1835 3211 1.347707 AGAGACGGTGCATTCCAAAGA 59.652 47.619 0.00 0.00 0.00 2.52
2009 3392 1.063649 CCTGCATCACAGCAATCGC 59.936 57.895 0.00 0.00 45.78 4.58
2101 3500 3.588511 TGATGCAGGTGGGGCCAA 61.589 61.111 4.39 0.00 40.61 4.52
2124 3523 2.278857 GCATCCGCGACGTCATCT 60.279 61.111 17.16 0.00 0.00 2.90
2125 3524 2.580470 GCATCCGCGACGTCATCTG 61.580 63.158 17.16 6.32 0.00 2.90
2126 3525 1.946156 CATCCGCGACGTCATCTGG 60.946 63.158 17.16 10.89 0.00 3.86
2127 3526 2.119029 ATCCGCGACGTCATCTGGA 61.119 57.895 17.16 15.79 34.91 3.86
2128 3527 1.663379 ATCCGCGACGTCATCTGGAA 61.663 55.000 17.16 2.42 34.33 3.53
2129 3528 1.445410 CCGCGACGTCATCTGGAAA 60.445 57.895 17.16 0.00 0.00 3.13
2130 3529 1.011968 CCGCGACGTCATCTGGAAAA 61.012 55.000 17.16 0.00 0.00 2.29
2131 3530 0.366871 CGCGACGTCATCTGGAAAAG 59.633 55.000 17.16 0.00 0.00 2.27
2132 3531 1.710013 GCGACGTCATCTGGAAAAGA 58.290 50.000 17.16 0.00 39.94 2.52
2133 3532 2.066262 GCGACGTCATCTGGAAAAGAA 58.934 47.619 17.16 0.00 38.79 2.52
2134 3533 2.673368 GCGACGTCATCTGGAAAAGAAT 59.327 45.455 17.16 0.00 38.79 2.40
2135 3534 3.125316 GCGACGTCATCTGGAAAAGAATT 59.875 43.478 17.16 0.00 38.79 2.17
2136 3535 4.725169 GCGACGTCATCTGGAAAAGAATTC 60.725 45.833 17.16 0.00 38.79 2.17
2137 3536 4.627467 CGACGTCATCTGGAAAAGAATTCT 59.373 41.667 17.16 0.88 38.79 2.40
2138 3537 5.805486 CGACGTCATCTGGAAAAGAATTCTA 59.195 40.000 17.16 0.00 38.79 2.10
2139 3538 6.477033 CGACGTCATCTGGAAAAGAATTCTAT 59.523 38.462 17.16 0.41 38.79 1.98
2140 3539 7.515841 CGACGTCATCTGGAAAAGAATTCTATG 60.516 40.741 17.16 7.06 38.79 2.23
2141 3540 7.331026 ACGTCATCTGGAAAAGAATTCTATGA 58.669 34.615 8.75 9.33 38.79 2.15
2142 3541 7.493971 ACGTCATCTGGAAAAGAATTCTATGAG 59.506 37.037 8.75 8.56 38.79 2.90
2143 3542 7.708322 CGTCATCTGGAAAAGAATTCTATGAGA 59.292 37.037 8.75 6.71 38.79 3.27
2144 3543 8.825745 GTCATCTGGAAAAGAATTCTATGAGAC 58.174 37.037 8.75 4.52 38.79 3.36
2145 3544 7.708322 TCATCTGGAAAAGAATTCTATGAGACG 59.292 37.037 8.75 0.00 38.79 4.18
2146 3545 6.936279 TCTGGAAAAGAATTCTATGAGACGT 58.064 36.000 8.75 0.00 29.54 4.34
2147 3546 6.813649 TCTGGAAAAGAATTCTATGAGACGTG 59.186 38.462 8.75 0.00 29.54 4.49
2148 3547 5.874810 TGGAAAAGAATTCTATGAGACGTGG 59.125 40.000 8.75 0.00 0.00 4.94
2149 3548 5.220681 GGAAAAGAATTCTATGAGACGTGGC 60.221 44.000 8.75 0.00 0.00 5.01
2150 3549 4.471904 AAGAATTCTATGAGACGTGGCA 57.528 40.909 8.75 0.00 0.00 4.92
2151 3550 4.679373 AGAATTCTATGAGACGTGGCAT 57.321 40.909 6.06 0.00 0.00 4.40
2152 3551 5.028549 AGAATTCTATGAGACGTGGCATT 57.971 39.130 6.06 0.00 0.00 3.56
2153 3552 5.053145 AGAATTCTATGAGACGTGGCATTC 58.947 41.667 6.06 0.00 0.00 2.67
2154 3553 3.885724 TTCTATGAGACGTGGCATTCA 57.114 42.857 0.00 0.00 0.00 2.57
2155 3554 4.406648 TTCTATGAGACGTGGCATTCAT 57.593 40.909 0.00 1.28 34.81 2.57
2156 3555 5.529581 TTCTATGAGACGTGGCATTCATA 57.470 39.130 0.00 2.44 32.83 2.15
2157 3556 5.529581 TCTATGAGACGTGGCATTCATAA 57.470 39.130 0.00 4.93 33.51 1.90
2158 3557 5.912892 TCTATGAGACGTGGCATTCATAAA 58.087 37.500 0.00 1.61 33.51 1.40
2159 3558 6.524734 TCTATGAGACGTGGCATTCATAAAT 58.475 36.000 0.00 0.00 33.51 1.40
2160 3559 5.679734 ATGAGACGTGGCATTCATAAATC 57.320 39.130 0.00 0.00 0.00 2.17
2161 3560 4.512484 TGAGACGTGGCATTCATAAATCA 58.488 39.130 0.00 0.00 0.00 2.57
2162 3561 4.332543 TGAGACGTGGCATTCATAAATCAC 59.667 41.667 0.00 0.00 0.00 3.06
2163 3562 4.260985 AGACGTGGCATTCATAAATCACA 58.739 39.130 0.00 0.00 0.00 3.58
2164 3563 4.699735 AGACGTGGCATTCATAAATCACAA 59.300 37.500 0.00 0.00 0.00 3.33
2165 3564 5.182950 AGACGTGGCATTCATAAATCACAAA 59.817 36.000 0.00 0.00 0.00 2.83
2166 3565 5.401550 ACGTGGCATTCATAAATCACAAAG 58.598 37.500 0.00 0.00 0.00 2.77
2167 3566 5.048083 ACGTGGCATTCATAAATCACAAAGT 60.048 36.000 0.00 0.00 0.00 2.66
2168 3567 6.150307 ACGTGGCATTCATAAATCACAAAGTA 59.850 34.615 0.00 0.00 0.00 2.24
2169 3568 7.148086 ACGTGGCATTCATAAATCACAAAGTAT 60.148 33.333 0.00 0.00 0.00 2.12
2170 3569 7.376866 CGTGGCATTCATAAATCACAAAGTATC 59.623 37.037 0.00 0.00 0.00 2.24
2171 3570 7.649306 GTGGCATTCATAAATCACAAAGTATCC 59.351 37.037 0.00 0.00 0.00 2.59
2172 3571 7.560991 TGGCATTCATAAATCACAAAGTATCCT 59.439 33.333 0.00 0.00 0.00 3.24
2173 3572 8.416329 GGCATTCATAAATCACAAAGTATCCTT 58.584 33.333 0.00 0.00 0.00 3.36
2174 3573 9.455847 GCATTCATAAATCACAAAGTATCCTTC 57.544 33.333 0.00 0.00 0.00 3.46
2175 3574 9.655769 CATTCATAAATCACAAAGTATCCTTCG 57.344 33.333 0.00 0.00 0.00 3.79
2176 3575 8.786826 TTCATAAATCACAAAGTATCCTTCGT 57.213 30.769 0.00 0.00 0.00 3.85
2177 3576 8.420374 TCATAAATCACAAAGTATCCTTCGTC 57.580 34.615 0.00 0.00 0.00 4.20
2178 3577 7.494625 TCATAAATCACAAAGTATCCTTCGTCC 59.505 37.037 0.00 0.00 0.00 4.79
2179 3578 3.604875 TCACAAAGTATCCTTCGTCCC 57.395 47.619 0.00 0.00 0.00 4.46
2180 3579 2.235402 TCACAAAGTATCCTTCGTCCCC 59.765 50.000 0.00 0.00 0.00 4.81
2181 3580 1.558294 ACAAAGTATCCTTCGTCCCCC 59.442 52.381 0.00 0.00 0.00 5.40
2182 3581 1.557832 CAAAGTATCCTTCGTCCCCCA 59.442 52.381 0.00 0.00 0.00 4.96
2183 3582 1.201424 AAGTATCCTTCGTCCCCCAC 58.799 55.000 0.00 0.00 0.00 4.61
2184 3583 0.338814 AGTATCCTTCGTCCCCCACT 59.661 55.000 0.00 0.00 0.00 4.00
2185 3584 1.201424 GTATCCTTCGTCCCCCACTT 58.799 55.000 0.00 0.00 0.00 3.16
2186 3585 2.023695 AGTATCCTTCGTCCCCCACTTA 60.024 50.000 0.00 0.00 0.00 2.24
2187 3586 1.961133 ATCCTTCGTCCCCCACTTAA 58.039 50.000 0.00 0.00 0.00 1.85
2188 3587 1.732117 TCCTTCGTCCCCCACTTAAA 58.268 50.000 0.00 0.00 0.00 1.52
2189 3588 2.056359 TCCTTCGTCCCCCACTTAAAA 58.944 47.619 0.00 0.00 0.00 1.52
2190 3589 2.645797 TCCTTCGTCCCCCACTTAAAAT 59.354 45.455 0.00 0.00 0.00 1.82
2191 3590 3.014623 CCTTCGTCCCCCACTTAAAATC 58.985 50.000 0.00 0.00 0.00 2.17
2192 3591 3.560453 CCTTCGTCCCCCACTTAAAATCA 60.560 47.826 0.00 0.00 0.00 2.57
2193 3592 3.791953 TCGTCCCCCACTTAAAATCAA 57.208 42.857 0.00 0.00 0.00 2.57
2194 3593 4.310022 TCGTCCCCCACTTAAAATCAAT 57.690 40.909 0.00 0.00 0.00 2.57
2195 3594 4.013728 TCGTCCCCCACTTAAAATCAATG 58.986 43.478 0.00 0.00 0.00 2.82
2196 3595 4.013728 CGTCCCCCACTTAAAATCAATGA 58.986 43.478 0.00 0.00 0.00 2.57
2197 3596 4.461081 CGTCCCCCACTTAAAATCAATGAA 59.539 41.667 0.00 0.00 0.00 2.57
2198 3597 5.393027 CGTCCCCCACTTAAAATCAATGAAG 60.393 44.000 0.00 0.00 0.00 3.02
2199 3598 5.714806 GTCCCCCACTTAAAATCAATGAAGA 59.285 40.000 0.00 0.00 0.00 2.87
2200 3599 6.210584 GTCCCCCACTTAAAATCAATGAAGAA 59.789 38.462 0.00 0.00 0.00 2.52
2201 3600 6.437162 TCCCCCACTTAAAATCAATGAAGAAG 59.563 38.462 0.00 0.00 0.00 2.85
2202 3601 6.437162 CCCCCACTTAAAATCAATGAAGAAGA 59.563 38.462 0.00 0.00 0.00 2.87
2203 3602 7.363268 CCCCCACTTAAAATCAATGAAGAAGAG 60.363 40.741 0.00 0.00 0.00 2.85
2204 3603 7.394359 CCCCACTTAAAATCAATGAAGAAGAGA 59.606 37.037 0.00 0.00 0.00 3.10
2205 3604 8.964772 CCCACTTAAAATCAATGAAGAAGAGAT 58.035 33.333 0.00 0.00 0.00 2.75
2216 3615 9.850628 TCAATGAAGAAGAGATTAAATGCTTTG 57.149 29.630 0.00 0.00 0.00 2.77
2217 3616 9.635520 CAATGAAGAAGAGATTAAATGCTTTGT 57.364 29.630 0.00 0.00 0.00 2.83
2218 3617 9.635520 AATGAAGAAGAGATTAAATGCTTTGTG 57.364 29.630 0.00 0.00 0.00 3.33
2219 3618 8.394971 TGAAGAAGAGATTAAATGCTTTGTGA 57.605 30.769 0.00 0.00 0.00 3.58
2220 3619 9.017509 TGAAGAAGAGATTAAATGCTTTGTGAT 57.982 29.630 0.00 0.00 0.00 3.06
2221 3620 9.852091 GAAGAAGAGATTAAATGCTTTGTGATT 57.148 29.630 0.00 0.00 0.00 2.57
2223 3622 9.635520 AGAAGAGATTAAATGCTTTGTGATTTG 57.364 29.630 0.00 0.00 0.00 2.32
2224 3623 9.415544 GAAGAGATTAAATGCTTTGTGATTTGT 57.584 29.630 0.00 0.00 0.00 2.83
2225 3624 8.752766 AGAGATTAAATGCTTTGTGATTTGTG 57.247 30.769 0.00 0.00 0.00 3.33
2226 3625 8.579006 AGAGATTAAATGCTTTGTGATTTGTGA 58.421 29.630 0.00 0.00 0.00 3.58
2227 3626 9.195411 GAGATTAAATGCTTTGTGATTTGTGAA 57.805 29.630 0.00 0.00 0.00 3.18
2228 3627 9.715121 AGATTAAATGCTTTGTGATTTGTGAAT 57.285 25.926 0.00 0.00 0.00 2.57
2229 3628 9.749490 GATTAAATGCTTTGTGATTTGTGAATG 57.251 29.630 0.00 0.00 0.00 2.67
2230 3629 5.600908 AATGCTTTGTGATTTGTGAATGC 57.399 34.783 0.00 0.00 0.00 3.56
2231 3630 3.391965 TGCTTTGTGATTTGTGAATGCC 58.608 40.909 0.00 0.00 0.00 4.40
2232 3631 3.181468 TGCTTTGTGATTTGTGAATGCCA 60.181 39.130 0.00 0.00 0.00 4.92
2233 3632 3.184986 GCTTTGTGATTTGTGAATGCCAC 59.815 43.478 0.00 0.00 45.88 5.01
2242 3641 2.857592 GTGAATGCCACATGTCATCC 57.142 50.000 0.00 0.00 45.03 3.51
2243 3642 2.093890 GTGAATGCCACATGTCATCCA 58.906 47.619 0.00 0.00 45.03 3.41
2244 3643 2.691526 GTGAATGCCACATGTCATCCAT 59.308 45.455 0.00 0.00 45.03 3.41
2245 3644 3.131577 GTGAATGCCACATGTCATCCATT 59.868 43.478 0.00 2.52 45.03 3.16
2246 3645 3.131400 TGAATGCCACATGTCATCCATTG 59.869 43.478 12.03 0.00 0.00 2.82
2247 3646 1.476477 TGCCACATGTCATCCATTGG 58.524 50.000 0.00 0.00 36.04 3.16
2248 3647 0.748450 GCCACATGTCATCCATTGGG 59.252 55.000 2.09 0.00 34.72 4.12
2257 3656 3.721868 TCCATTGGGACGGGTCTC 58.278 61.111 2.09 0.00 38.64 3.36
2258 3657 1.229368 TCCATTGGGACGGGTCTCA 60.229 57.895 2.09 0.00 38.64 3.27
2259 3658 1.078426 CCATTGGGACGGGTCTCAC 60.078 63.158 0.00 0.00 40.30 3.51
2260 3659 1.078426 CATTGGGACGGGTCTCACC 60.078 63.158 0.00 0.00 40.30 4.02
2261 3660 1.229529 ATTGGGACGGGTCTCACCT 60.230 57.895 0.00 0.00 40.30 4.00
2267 3666 4.913126 CGGGTCTCACCTGCTAAC 57.087 61.111 0.00 0.00 37.90 2.34
2268 3667 1.218316 CGGGTCTCACCTGCTAACC 59.782 63.158 0.00 0.00 37.90 2.85
2269 3668 1.218316 GGGTCTCACCTGCTAACCG 59.782 63.158 0.00 0.00 38.64 4.44
2270 3669 1.542187 GGGTCTCACCTGCTAACCGT 61.542 60.000 0.00 0.00 38.64 4.83
2271 3670 0.389948 GGTCTCACCTGCTAACCGTG 60.390 60.000 0.00 0.00 34.73 4.94
2272 3671 0.601558 GTCTCACCTGCTAACCGTGA 59.398 55.000 0.00 0.00 35.34 4.35
2273 3672 3.425578 CTCACCTGCTAACCGTGAG 57.574 57.895 2.35 2.35 45.33 3.51
2274 3673 3.045518 TCACCTGCTAACCGTGAGA 57.954 52.632 0.00 0.00 32.85 3.27
2275 3674 1.557099 TCACCTGCTAACCGTGAGAT 58.443 50.000 0.00 0.00 32.85 2.75
2276 3675 1.476891 TCACCTGCTAACCGTGAGATC 59.523 52.381 0.00 0.00 32.85 2.75
2277 3676 1.478510 CACCTGCTAACCGTGAGATCT 59.521 52.381 0.00 0.00 0.00 2.75
2278 3677 1.478510 ACCTGCTAACCGTGAGATCTG 59.521 52.381 0.00 0.00 0.00 2.90
2279 3678 1.202463 CCTGCTAACCGTGAGATCTGG 60.202 57.143 0.00 0.00 0.00 3.86
2280 3679 1.478510 CTGCTAACCGTGAGATCTGGT 59.521 52.381 0.00 0.00 37.68 4.00
2281 3680 1.899814 TGCTAACCGTGAGATCTGGTT 59.100 47.619 17.41 17.41 38.79 3.67
2282 3681 2.301870 TGCTAACCGTGAGATCTGGTTT 59.698 45.455 18.23 6.13 38.79 3.27
2283 3682 2.930682 GCTAACCGTGAGATCTGGTTTC 59.069 50.000 18.23 9.37 38.79 2.78
2284 3683 3.616560 GCTAACCGTGAGATCTGGTTTCA 60.617 47.826 18.23 4.15 38.79 2.69
2285 3684 3.703001 AACCGTGAGATCTGGTTTCAT 57.297 42.857 9.60 0.00 38.79 2.57
2286 3685 4.819105 AACCGTGAGATCTGGTTTCATA 57.181 40.909 9.60 0.00 38.79 2.15
2287 3686 5.359194 AACCGTGAGATCTGGTTTCATAT 57.641 39.130 9.60 0.00 38.79 1.78
2288 3687 6.479972 AACCGTGAGATCTGGTTTCATATA 57.520 37.500 9.60 0.00 38.79 0.86
2289 3688 6.479972 ACCGTGAGATCTGGTTTCATATAA 57.520 37.500 0.00 0.00 29.87 0.98
2290 3689 7.067496 ACCGTGAGATCTGGTTTCATATAAT 57.933 36.000 0.00 0.00 29.87 1.28
2291 3690 7.509546 ACCGTGAGATCTGGTTTCATATAATT 58.490 34.615 0.00 0.00 29.87 1.40
2292 3691 7.993183 ACCGTGAGATCTGGTTTCATATAATTT 59.007 33.333 0.00 0.00 29.87 1.82
2293 3692 8.840321 CCGTGAGATCTGGTTTCATATAATTTT 58.160 33.333 0.00 0.00 0.00 1.82
2425 3824 3.260483 GCTGCTCATCGCGTCCAG 61.260 66.667 5.77 7.83 43.27 3.86
2499 3918 0.321653 GGATCCTCGCCGGCATATTT 60.322 55.000 28.98 7.67 0.00 1.40
2555 3974 0.961019 GGCATGTTTGTCCTCAAGCA 59.039 50.000 0.00 0.69 45.65 3.91
2571 3990 1.081309 GCACATGTGACGCAATGCA 60.081 52.632 29.80 0.00 40.75 3.96
2573 3992 0.730155 CACATGTGACGCAATGCACC 60.730 55.000 21.64 0.00 34.19 5.01
2591 4010 3.753272 GCACCTGCACTTGATAGAAAGAA 59.247 43.478 0.00 0.00 41.59 2.52
2592 4011 4.142730 GCACCTGCACTTGATAGAAAGAAG 60.143 45.833 0.00 0.00 41.59 2.85
2619 4038 3.451402 TCAACCTGTAGTAGAGCCTGA 57.549 47.619 0.00 0.00 0.00 3.86
2642 4061 1.002134 ATGGGCCTTGTTCAGTCGG 60.002 57.895 4.53 0.00 0.00 4.79
2646 4065 0.035739 GGCCTTGTTCAGTCGGGTTA 59.964 55.000 0.00 0.00 0.00 2.85
2669 4088 4.442706 TCACTGAAACTGAAGTGAGTTCC 58.557 43.478 1.50 0.00 45.97 3.62
2670 4089 4.162320 TCACTGAAACTGAAGTGAGTTCCT 59.838 41.667 1.50 0.00 45.97 3.36
2671 4090 4.272018 CACTGAAACTGAAGTGAGTTCCTG 59.728 45.833 0.00 0.00 45.43 3.86
2672 4091 4.080863 ACTGAAACTGAAGTGAGTTCCTGT 60.081 41.667 0.00 0.00 35.01 4.00
2673 4092 4.843728 TGAAACTGAAGTGAGTTCCTGTT 58.156 39.130 0.00 0.79 35.01 3.16
2674 4093 4.876107 TGAAACTGAAGTGAGTTCCTGTTC 59.124 41.667 8.29 5.01 35.01 3.18
2675 4094 4.762289 AACTGAAGTGAGTTCCTGTTCT 57.238 40.909 0.00 0.00 29.85 3.01
2676 4095 4.065321 ACTGAAGTGAGTTCCTGTTCTG 57.935 45.455 0.00 0.00 33.75 3.02
2677 4096 3.706594 ACTGAAGTGAGTTCCTGTTCTGA 59.293 43.478 0.00 0.00 33.75 3.27
2678 4097 4.346418 ACTGAAGTGAGTTCCTGTTCTGAT 59.654 41.667 0.00 0.00 33.75 2.90
2679 4098 4.635223 TGAAGTGAGTTCCTGTTCTGATG 58.365 43.478 0.00 0.00 33.75 3.07
2680 4099 3.692257 AGTGAGTTCCTGTTCTGATGG 57.308 47.619 0.00 0.00 0.00 3.51
2681 4100 2.975489 AGTGAGTTCCTGTTCTGATGGT 59.025 45.455 0.00 0.00 0.00 3.55
2682 4101 3.070018 GTGAGTTCCTGTTCTGATGGTG 58.930 50.000 0.00 0.00 0.00 4.17
2683 4102 2.038952 TGAGTTCCTGTTCTGATGGTGG 59.961 50.000 0.00 0.00 0.00 4.61
2684 4103 1.352352 AGTTCCTGTTCTGATGGTGGG 59.648 52.381 0.00 0.00 0.00 4.61
2685 4104 1.351017 GTTCCTGTTCTGATGGTGGGA 59.649 52.381 0.00 0.00 0.00 4.37
2686 4105 1.741028 TCCTGTTCTGATGGTGGGAA 58.259 50.000 0.00 0.00 0.00 3.97
2687 4106 2.278245 TCCTGTTCTGATGGTGGGAAT 58.722 47.619 0.00 0.00 0.00 3.01
2688 4107 2.025981 TCCTGTTCTGATGGTGGGAATG 60.026 50.000 0.00 0.00 0.00 2.67
2689 4108 2.372264 CTGTTCTGATGGTGGGAATGG 58.628 52.381 0.00 0.00 0.00 3.16
2690 4109 1.710244 TGTTCTGATGGTGGGAATGGT 59.290 47.619 0.00 0.00 0.00 3.55
2691 4110 2.109834 TGTTCTGATGGTGGGAATGGTT 59.890 45.455 0.00 0.00 0.00 3.67
2692 4111 2.755103 GTTCTGATGGTGGGAATGGTTC 59.245 50.000 0.00 0.00 0.00 3.62
2706 4125 2.566833 TGGTTCCTGTTCTGATGGTG 57.433 50.000 0.00 0.00 0.00 4.17
2763 4205 1.567357 TGGTAGGATGCACTGCACTA 58.433 50.000 5.67 1.47 43.04 2.74
2764 4206 1.905894 TGGTAGGATGCACTGCACTAA 59.094 47.619 5.67 0.00 43.04 2.24
2765 4207 2.505407 TGGTAGGATGCACTGCACTAAT 59.495 45.455 5.67 0.00 43.04 1.73
2815 4257 5.522460 GGAATTGCCAACTGAATCAATCATG 59.478 40.000 0.00 0.00 35.25 3.07
2830 4272 5.005740 TCAATCATGTGCTATATGGGAAGC 58.994 41.667 0.00 0.00 39.25 3.86
2862 4304 8.630917 AGTCGCTTTCTACAATATGTACTATGT 58.369 33.333 0.00 0.00 0.00 2.29
2886 4328 9.288576 TGTGAATATCAACTTGTCTTTTCATCT 57.711 29.630 0.00 0.00 0.00 2.90
2892 4334 8.682936 ATCAACTTGTCTTTTCATCTAAGTGT 57.317 30.769 0.00 0.00 0.00 3.55
2893 4335 9.778741 ATCAACTTGTCTTTTCATCTAAGTGTA 57.221 29.630 0.00 0.00 0.00 2.90
2894 4336 9.261180 TCAACTTGTCTTTTCATCTAAGTGTAG 57.739 33.333 0.00 0.00 0.00 2.74
2895 4337 7.659652 ACTTGTCTTTTCATCTAAGTGTAGC 57.340 36.000 0.00 0.00 0.00 3.58
2896 4338 7.445945 ACTTGTCTTTTCATCTAAGTGTAGCT 58.554 34.615 0.00 0.00 0.00 3.32
2897 4339 7.386299 ACTTGTCTTTTCATCTAAGTGTAGCTG 59.614 37.037 0.00 0.00 0.00 4.24
2898 4340 5.639506 TGTCTTTTCATCTAAGTGTAGCTGC 59.360 40.000 0.00 0.00 0.00 5.25
2899 4341 5.064071 GTCTTTTCATCTAAGTGTAGCTGCC 59.936 44.000 0.00 0.00 0.00 4.85
2900 4342 4.551702 TTTCATCTAAGTGTAGCTGCCA 57.448 40.909 0.00 0.00 0.00 4.92
2901 4343 3.808466 TCATCTAAGTGTAGCTGCCAG 57.192 47.619 0.00 0.00 0.00 4.85
2902 4344 2.159043 TCATCTAAGTGTAGCTGCCAGC 60.159 50.000 9.13 9.13 42.84 4.85
2903 4345 1.266178 TCTAAGTGTAGCTGCCAGCA 58.734 50.000 20.53 1.79 45.56 4.41
2904 4346 1.833630 TCTAAGTGTAGCTGCCAGCAT 59.166 47.619 20.53 6.68 45.56 3.79
2905 4347 2.237143 TCTAAGTGTAGCTGCCAGCATT 59.763 45.455 20.53 7.78 45.56 3.56
2906 4348 1.457346 AAGTGTAGCTGCCAGCATTC 58.543 50.000 20.53 8.99 45.56 2.67
2907 4349 0.742281 AGTGTAGCTGCCAGCATTCG 60.742 55.000 20.53 0.00 45.56 3.34
2908 4350 0.740868 GTGTAGCTGCCAGCATTCGA 60.741 55.000 20.53 0.00 45.56 3.71
2909 4351 0.460811 TGTAGCTGCCAGCATTCGAG 60.461 55.000 20.53 0.00 45.56 4.04
2910 4352 0.460987 GTAGCTGCCAGCATTCGAGT 60.461 55.000 20.53 0.00 45.56 4.18
2911 4353 1.111277 TAGCTGCCAGCATTCGAGTA 58.889 50.000 20.53 0.00 45.56 2.59
2912 4354 0.250234 AGCTGCCAGCATTCGAGTAA 59.750 50.000 20.53 0.00 45.56 2.24
2913 4355 0.654683 GCTGCCAGCATTCGAGTAAG 59.345 55.000 12.82 0.00 41.89 2.34
2914 4356 2.009042 GCTGCCAGCATTCGAGTAAGT 61.009 52.381 12.82 0.00 41.89 2.24
2915 4357 1.929836 CTGCCAGCATTCGAGTAAGTC 59.070 52.381 0.00 0.00 0.00 3.01
2916 4358 1.550524 TGCCAGCATTCGAGTAAGTCT 59.449 47.619 0.00 0.00 0.00 3.24
2917 4359 2.028112 TGCCAGCATTCGAGTAAGTCTT 60.028 45.455 0.00 0.00 0.00 3.01
2918 4360 3.003480 GCCAGCATTCGAGTAAGTCTTT 58.997 45.455 0.00 0.00 0.00 2.52
2919 4361 3.437049 GCCAGCATTCGAGTAAGTCTTTT 59.563 43.478 0.00 0.00 0.00 2.27
2920 4362 4.436183 GCCAGCATTCGAGTAAGTCTTTTC 60.436 45.833 0.00 0.00 0.00 2.29
2921 4363 4.690748 CCAGCATTCGAGTAAGTCTTTTCA 59.309 41.667 0.00 0.00 0.00 2.69
2922 4364 5.352569 CCAGCATTCGAGTAAGTCTTTTCAT 59.647 40.000 0.00 0.00 0.00 2.57
2923 4365 6.535150 CCAGCATTCGAGTAAGTCTTTTCATA 59.465 38.462 0.00 0.00 0.00 2.15
2924 4366 7.225538 CCAGCATTCGAGTAAGTCTTTTCATAT 59.774 37.037 0.00 0.00 0.00 1.78
2925 4367 8.272176 CAGCATTCGAGTAAGTCTTTTCATATC 58.728 37.037 0.00 0.00 0.00 1.63
2926 4368 8.200792 AGCATTCGAGTAAGTCTTTTCATATCT 58.799 33.333 0.00 0.00 0.00 1.98
2927 4369 8.484008 GCATTCGAGTAAGTCTTTTCATATCTC 58.516 37.037 0.00 0.00 0.00 2.75
2928 4370 9.521503 CATTCGAGTAAGTCTTTTCATATCTCA 57.478 33.333 0.00 0.00 0.00 3.27
2929 4371 9.743057 ATTCGAGTAAGTCTTTTCATATCTCAG 57.257 33.333 0.00 0.00 0.00 3.35
2930 4372 8.282455 TCGAGTAAGTCTTTTCATATCTCAGT 57.718 34.615 0.00 0.00 0.00 3.41
2931 4373 8.184848 TCGAGTAAGTCTTTTCATATCTCAGTG 58.815 37.037 0.00 0.00 0.00 3.66
2932 4374 7.971168 CGAGTAAGTCTTTTCATATCTCAGTGT 59.029 37.037 0.00 0.00 0.00 3.55
2933 4375 9.646427 GAGTAAGTCTTTTCATATCTCAGTGTT 57.354 33.333 0.00 0.00 0.00 3.32
2937 4379 9.646427 AAGTCTTTTCATATCTCAGTGTTAGTC 57.354 33.333 0.00 0.00 0.00 2.59
2938 4380 9.030452 AGTCTTTTCATATCTCAGTGTTAGTCT 57.970 33.333 0.00 0.00 0.00 3.24
2939 4381 9.296400 GTCTTTTCATATCTCAGTGTTAGTCTC 57.704 37.037 0.00 0.00 0.00 3.36
2945 4387 9.634021 TCATATCTCAGTGTTAGTCTCTTGTAT 57.366 33.333 0.00 0.00 0.00 2.29
3006 4448 7.893124 AATGAAGCATCAAGAGGATACAAAT 57.107 32.000 0.00 0.00 39.49 2.32
3012 4457 9.851686 AAGCATCAAGAGGATACAAATACAATA 57.148 29.630 0.00 0.00 41.41 1.90
3029 4474 5.056553 ACAATAAACATATACCCGGCCTT 57.943 39.130 0.00 0.00 0.00 4.35
3044 4489 3.244422 CCGGCCTTTGCATAGTTAGGATA 60.244 47.826 0.00 0.00 40.13 2.59
3045 4490 4.565652 CCGGCCTTTGCATAGTTAGGATAT 60.566 45.833 0.00 0.00 40.13 1.63
3046 4491 4.393062 CGGCCTTTGCATAGTTAGGATATG 59.607 45.833 0.00 0.00 40.13 1.78
3120 4569 9.511272 TCATATAAGACCAAAGCTATACGTAGA 57.489 33.333 0.08 0.00 0.00 2.59
3205 4662 0.597637 GACCATATCTGCACCGACCG 60.598 60.000 0.00 0.00 0.00 4.79
3260 4717 0.886490 CAGCAACGCCTTCAGGAAGT 60.886 55.000 8.14 0.00 36.72 3.01
3261 4718 0.685097 AGCAACGCCTTCAGGAAGTA 59.315 50.000 8.14 0.00 36.72 2.24
3328 4785 4.589374 GCTAGAATCTAGGCTTTCACCCTA 59.411 45.833 17.99 0.00 33.88 3.53
3331 4788 6.388619 AGAATCTAGGCTTTCACCCTAAAA 57.611 37.500 0.00 0.00 34.68 1.52
3365 4822 4.114058 CATTCCGAACAATGCCTTCAAT 57.886 40.909 0.00 0.00 0.00 2.57
3369 4826 4.584874 TCCGAACAATGCCTTCAATAAGA 58.415 39.130 0.00 0.00 34.37 2.10
3444 4902 0.243907 CTTTCACTCCGGAGCTCGAA 59.756 55.000 31.56 25.63 42.43 3.71
3447 4905 1.801913 CACTCCGGAGCTCGAAACG 60.802 63.158 31.56 5.63 42.43 3.60
3547 5005 2.159043 CGCTGTACAATCATCCCTCTGT 60.159 50.000 0.00 0.00 0.00 3.41
3553 5011 7.194112 TGTACAATCATCCCTCTGTATCAAA 57.806 36.000 0.00 0.00 0.00 2.69
3560 5018 4.553330 TCCCTCTGTATCAAAACTCCAC 57.447 45.455 0.00 0.00 0.00 4.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
16 17 1.152902 TGTTCTGCCTTGCTGCTGT 60.153 52.632 0.00 0.00 0.00 4.40
40 41 2.110226 GCCTTCGTTCGATAACTCTCG 58.890 52.381 0.00 0.00 39.99 4.04
71 72 1.475682 GCATCCTTTTGGCCTTCTCTG 59.524 52.381 3.32 0.00 40.12 3.35
101 102 0.693092 TTCCTATCCTTGACCGGGGG 60.693 60.000 6.32 2.19 0.00 5.40
147 148 2.054453 GGGGTCCTTGCCTCAATGC 61.054 63.158 0.00 0.00 0.00 3.56
150 151 3.681129 TTGGGGTCCTTGCCTCAA 58.319 55.556 0.00 0.00 45.97 3.02
157 158 2.680370 GCGAGGGATTGGGGTCCTT 61.680 63.158 0.00 0.00 38.38 3.36
158 159 3.090532 GCGAGGGATTGGGGTCCT 61.091 66.667 0.00 0.00 38.38 3.85
165 166 2.046023 TGCAGGTGCGAGGGATTG 60.046 61.111 0.00 0.00 45.83 2.67
167 168 4.479993 GCTGCAGGTGCGAGGGAT 62.480 66.667 17.12 0.00 45.83 3.85
196 198 0.042131 TCCTAATCGGGTCCAGGTGT 59.958 55.000 0.00 0.00 0.00 4.16
206 208 4.263018 TCATCTTCAGCATCCTAATCGG 57.737 45.455 0.00 0.00 0.00 4.18
207 209 9.247126 CTAATATCATCTTCAGCATCCTAATCG 57.753 37.037 0.00 0.00 0.00 3.34
210 212 7.334090 GCCTAATATCATCTTCAGCATCCTAA 58.666 38.462 0.00 0.00 0.00 2.69
222 224 4.330250 GCATGTGTGGCCTAATATCATCT 58.670 43.478 3.32 0.00 0.00 2.90
238 240 1.153784 GGTTCAATGGCGGCATGTG 60.154 57.895 26.50 22.70 0.00 3.21
244 246 2.635443 GGGTGTGGTTCAATGGCGG 61.635 63.158 0.00 0.00 0.00 6.13
247 249 1.538047 CTCTGGGTGTGGTTCAATGG 58.462 55.000 0.00 0.00 0.00 3.16
250 252 1.150536 GGCTCTGGGTGTGGTTCAA 59.849 57.895 0.00 0.00 0.00 2.69
251 253 1.426251 ATGGCTCTGGGTGTGGTTCA 61.426 55.000 0.00 0.00 0.00 3.18
264 266 0.749649 AGTGTCATCCGAGATGGCTC 59.250 55.000 16.10 13.30 37.80 4.70
265 267 1.198713 AAGTGTCATCCGAGATGGCT 58.801 50.000 16.10 9.06 37.80 4.75
266 268 1.936547 GAAAGTGTCATCCGAGATGGC 59.063 52.381 10.44 10.44 37.80 4.40
267 269 3.193263 CTGAAAGTGTCATCCGAGATGG 58.807 50.000 12.17 0.00 35.07 3.51
270 272 2.525368 TCCTGAAAGTGTCATCCGAGA 58.475 47.619 0.00 0.00 35.07 4.04
272 274 2.028112 CCTTCCTGAAAGTGTCATCCGA 60.028 50.000 0.00 0.00 35.07 4.55
298 313 1.609555 GACAACGGCATTTTGGTGGTA 59.390 47.619 0.00 0.00 0.00 3.25
319 334 1.412343 AGACAACAACATTTGGGTGGC 59.588 47.619 0.00 0.00 34.12 5.01
330 345 0.935196 AGTTCGGCGAAGACAACAAC 59.065 50.000 24.41 9.40 27.25 3.32
331 346 1.214367 GAGTTCGGCGAAGACAACAA 58.786 50.000 24.41 0.00 27.25 2.83
332 347 0.103390 TGAGTTCGGCGAAGACAACA 59.897 50.000 24.41 14.91 27.25 3.33
343 358 3.706698 TCTATCTTCGCATTGAGTTCGG 58.293 45.455 0.00 0.00 0.00 4.30
344 359 3.733224 CCTCTATCTTCGCATTGAGTTCG 59.267 47.826 0.00 0.00 0.00 3.95
351 366 4.219115 TCCTTCTCCTCTATCTTCGCATT 58.781 43.478 0.00 0.00 0.00 3.56
353 368 3.218453 CTCCTTCTCCTCTATCTTCGCA 58.782 50.000 0.00 0.00 0.00 5.10
357 372 2.248686 TGGCCTCCTTCTCCTCTATCTT 59.751 50.000 3.32 0.00 0.00 2.40
369 384 0.615850 GTAGTTGCTCTGGCCTCCTT 59.384 55.000 3.32 0.00 37.74 3.36
413 433 4.115401 TCGGAGATGTCAACAATCTCAG 57.885 45.455 13.73 10.42 41.80 3.35
414 434 4.160252 TCATCGGAGATGTCAACAATCTCA 59.840 41.667 13.73 0.00 45.12 3.27
420 440 2.456577 TCCTCATCGGAGATGTCAACA 58.543 47.619 9.50 0.00 44.26 3.33
434 454 5.250200 GTCGATCACCTATCTACTCCTCAT 58.750 45.833 0.00 0.00 31.87 2.90
435 455 4.643463 GTCGATCACCTATCTACTCCTCA 58.357 47.826 0.00 0.00 31.87 3.86
508 528 5.449107 TGCTTCCGGACATCTTATACTAC 57.551 43.478 1.83 0.00 0.00 2.73
527 547 4.035017 CGTTTCAAATTTCACGAGTTGCT 58.965 39.130 7.90 0.00 34.49 3.91
552 572 1.616865 CGTCCTTTGGTAGTGACTGGA 59.383 52.381 0.00 0.00 0.00 3.86
555 575 0.038526 CGCGTCCTTTGGTAGTGACT 60.039 55.000 0.00 0.00 0.00 3.41
560 580 4.180496 GGACGCGTCCTTTGGTAG 57.820 61.111 43.32 0.00 46.16 3.18
565 585 3.853597 GGACACGGACGCGTCCTTT 62.854 63.158 44.83 32.96 46.83 3.11
566 586 4.353437 GGACACGGACGCGTCCTT 62.353 66.667 44.83 37.96 46.83 3.36
584 604 0.981183 TACAGCCCTCAAATGTCCGT 59.019 50.000 0.00 0.00 0.00 4.69
589 609 2.877168 GAGCATCTACAGCCCTCAAATG 59.123 50.000 0.00 0.00 0.00 2.32
590 610 3.205784 GAGCATCTACAGCCCTCAAAT 57.794 47.619 0.00 0.00 0.00 2.32
623 643 9.021863 CGTGTGAGACCTAGTTTTATAGAATTC 57.978 37.037 0.00 0.00 0.00 2.17
624 644 8.746530 TCGTGTGAGACCTAGTTTTATAGAATT 58.253 33.333 0.00 0.00 0.00 2.17
625 645 8.289939 TCGTGTGAGACCTAGTTTTATAGAAT 57.710 34.615 0.00 0.00 0.00 2.40
626 646 7.609146 TCTCGTGTGAGACCTAGTTTTATAGAA 59.391 37.037 0.00 0.00 46.25 2.10
627 647 7.108194 TCTCGTGTGAGACCTAGTTTTATAGA 58.892 38.462 0.00 0.00 46.25 1.98
628 648 7.317842 TCTCGTGTGAGACCTAGTTTTATAG 57.682 40.000 0.00 0.00 46.25 1.31
641 661 4.542236 TCAGGATGGGTCTCGTGTGAGA 62.542 54.545 0.00 0.00 42.71 3.27
642 662 0.174389 CAGGATGGGTCTCGTGTGAG 59.826 60.000 0.00 0.00 43.99 3.51
643 663 0.251608 TCAGGATGGGTCTCGTGTGA 60.252 55.000 0.00 0.00 36.16 3.58
644 664 0.826715 ATCAGGATGGGTCTCGTGTG 59.173 55.000 0.00 0.00 36.16 3.82
645 665 2.091830 TCTATCAGGATGGGTCTCGTGT 60.092 50.000 0.00 0.00 36.16 4.49
646 666 2.587522 TCTATCAGGATGGGTCTCGTG 58.412 52.381 0.00 0.00 36.16 4.35
647 667 3.314307 TTCTATCAGGATGGGTCTCGT 57.686 47.619 0.00 0.00 36.16 4.18
648 668 4.564041 CATTTCTATCAGGATGGGTCTCG 58.436 47.826 0.00 0.00 36.16 4.04
649 669 4.041444 AGCATTTCTATCAGGATGGGTCTC 59.959 45.833 0.00 0.00 36.16 3.36
650 670 3.979347 AGCATTTCTATCAGGATGGGTCT 59.021 43.478 0.00 0.00 36.16 3.85
651 671 4.363991 AGCATTTCTATCAGGATGGGTC 57.636 45.455 0.00 0.00 36.16 4.46
652 672 4.803329 AAGCATTTCTATCAGGATGGGT 57.197 40.909 0.00 0.00 36.16 4.51
653 673 4.891756 ACAAAGCATTTCTATCAGGATGGG 59.108 41.667 0.00 0.00 35.03 4.00
654 674 5.591472 TCACAAAGCATTTCTATCAGGATGG 59.409 40.000 0.00 0.00 35.03 3.51
655 675 6.688637 TCACAAAGCATTTCTATCAGGATG 57.311 37.500 0.00 0.00 35.03 3.51
656 676 7.893124 AATCACAAAGCATTTCTATCAGGAT 57.107 32.000 0.00 0.00 35.03 3.24
657 677 7.177216 ACAAATCACAAAGCATTTCTATCAGGA 59.823 33.333 0.00 0.00 35.03 3.86
658 678 7.274904 CACAAATCACAAAGCATTTCTATCAGG 59.725 37.037 0.00 0.00 35.03 3.86
659 679 8.024865 TCACAAATCACAAAGCATTTCTATCAG 58.975 33.333 0.00 0.00 35.03 2.90
660 680 7.884257 TCACAAATCACAAAGCATTTCTATCA 58.116 30.769 0.00 0.00 35.03 2.15
661 681 8.746922 TTCACAAATCACAAAGCATTTCTATC 57.253 30.769 0.00 0.00 35.03 2.08
663 683 9.624697 GTATTCACAAATCACAAAGCATTTCTA 57.375 29.630 0.00 0.00 35.03 2.10
664 684 7.599998 GGTATTCACAAATCACAAAGCATTTCT 59.400 33.333 0.00 0.00 35.03 2.52
665 685 7.384660 TGGTATTCACAAATCACAAAGCATTTC 59.615 33.333 0.00 0.00 35.03 2.17
666 686 7.171337 GTGGTATTCACAAATCACAAAGCATTT 59.829 33.333 0.00 0.00 45.39 2.32
667 687 6.646240 GTGGTATTCACAAATCACAAAGCATT 59.354 34.615 0.00 0.00 45.39 3.56
668 688 6.158598 GTGGTATTCACAAATCACAAAGCAT 58.841 36.000 0.00 0.00 45.39 3.79
669 689 5.527951 GTGGTATTCACAAATCACAAAGCA 58.472 37.500 0.00 0.00 45.39 3.91
670 690 4.616802 CGTGGTATTCACAAATCACAAAGC 59.383 41.667 0.00 0.00 46.36 3.51
671 691 5.624900 CACGTGGTATTCACAAATCACAAAG 59.375 40.000 7.95 0.00 46.36 2.77
672 692 5.066634 ACACGTGGTATTCACAAATCACAAA 59.933 36.000 21.57 0.00 46.36 2.83
673 693 4.576873 ACACGTGGTATTCACAAATCACAA 59.423 37.500 21.57 0.00 46.36 3.33
674 694 4.130857 ACACGTGGTATTCACAAATCACA 58.869 39.130 21.57 0.00 46.36 3.58
675 695 4.212425 TGACACGTGGTATTCACAAATCAC 59.788 41.667 21.57 0.00 46.36 3.06
676 696 4.381411 TGACACGTGGTATTCACAAATCA 58.619 39.130 21.57 6.74 46.36 2.57
677 697 5.447279 GGATGACACGTGGTATTCACAAATC 60.447 44.000 21.57 8.32 46.36 2.17
678 698 4.394920 GGATGACACGTGGTATTCACAAAT 59.605 41.667 21.57 0.00 46.36 2.32
679 699 3.749088 GGATGACACGTGGTATTCACAAA 59.251 43.478 21.57 0.00 46.36 2.83
680 700 3.244249 TGGATGACACGTGGTATTCACAA 60.244 43.478 21.57 1.21 46.36 3.33
681 701 2.300437 TGGATGACACGTGGTATTCACA 59.700 45.455 21.57 6.78 46.36 3.58
682 702 2.967362 TGGATGACACGTGGTATTCAC 58.033 47.619 21.57 8.74 42.74 3.18
683 703 3.196685 TGATGGATGACACGTGGTATTCA 59.803 43.478 21.57 17.72 0.00 2.57
684 704 3.792401 TGATGGATGACACGTGGTATTC 58.208 45.455 21.57 12.58 0.00 1.75
685 705 3.904800 TGATGGATGACACGTGGTATT 57.095 42.857 21.57 0.00 0.00 1.89
686 706 3.450817 TCTTGATGGATGACACGTGGTAT 59.549 43.478 21.57 13.37 0.00 2.73
687 707 2.829120 TCTTGATGGATGACACGTGGTA 59.171 45.455 21.57 8.57 0.00 3.25
688 708 1.623311 TCTTGATGGATGACACGTGGT 59.377 47.619 21.57 5.35 0.00 4.16
689 709 2.002586 GTCTTGATGGATGACACGTGG 58.997 52.381 21.57 1.66 0.00 4.94
690 710 1.655597 CGTCTTGATGGATGACACGTG 59.344 52.381 15.48 15.48 0.00 4.49
691 711 1.404181 CCGTCTTGATGGATGACACGT 60.404 52.381 2.84 0.00 0.00 4.49
692 712 1.280982 CCGTCTTGATGGATGACACG 58.719 55.000 2.84 0.00 0.00 4.49
693 713 1.066143 ACCCGTCTTGATGGATGACAC 60.066 52.381 10.25 0.00 0.00 3.67
694 714 1.207089 GACCCGTCTTGATGGATGACA 59.793 52.381 10.25 0.00 0.00 3.58
695 715 1.482593 AGACCCGTCTTGATGGATGAC 59.517 52.381 10.25 0.00 36.31 3.06
696 716 1.757118 GAGACCCGTCTTGATGGATGA 59.243 52.381 10.25 0.00 40.61 2.92
697 717 1.482182 TGAGACCCGTCTTGATGGATG 59.518 52.381 10.25 0.00 40.61 3.51
698 718 1.482593 GTGAGACCCGTCTTGATGGAT 59.517 52.381 10.25 0.00 40.61 3.41
699 719 0.895530 GTGAGACCCGTCTTGATGGA 59.104 55.000 10.25 0.00 40.61 3.41
700 720 0.108138 GGTGAGACCCGTCTTGATGG 60.108 60.000 0.00 2.00 40.61 3.51
701 721 0.898320 AGGTGAGACCCGTCTTGATG 59.102 55.000 0.00 0.00 39.75 3.07
702 722 0.898320 CAGGTGAGACCCGTCTTGAT 59.102 55.000 0.00 0.00 39.75 2.57
703 723 1.816863 GCAGGTGAGACCCGTCTTGA 61.817 60.000 0.00 0.00 39.75 3.02
704 724 1.374758 GCAGGTGAGACCCGTCTTG 60.375 63.158 0.00 0.00 39.75 3.02
705 725 0.251653 TAGCAGGTGAGACCCGTCTT 60.252 55.000 0.00 0.00 39.75 3.01
706 726 0.251653 TTAGCAGGTGAGACCCGTCT 60.252 55.000 0.00 0.00 39.75 4.18
707 727 0.108756 GTTAGCAGGTGAGACCCGTC 60.109 60.000 0.00 0.00 39.75 4.79
708 728 1.542187 GGTTAGCAGGTGAGACCCGT 61.542 60.000 0.00 0.00 39.75 5.28
709 729 1.218316 GGTTAGCAGGTGAGACCCG 59.782 63.158 0.00 0.00 39.75 5.28
710 730 1.218316 CGGTTAGCAGGTGAGACCC 59.782 63.158 0.00 0.00 39.75 4.46
711 731 1.180029 TACGGTTAGCAGGTGAGACC 58.820 55.000 0.00 0.00 38.99 3.85
712 732 2.490903 TCTTACGGTTAGCAGGTGAGAC 59.509 50.000 0.00 0.00 0.00 3.36
713 733 2.490903 GTCTTACGGTTAGCAGGTGAGA 59.509 50.000 0.00 0.00 0.00 3.27
714 734 2.416972 GGTCTTACGGTTAGCAGGTGAG 60.417 54.545 0.00 0.00 0.00 3.51
715 735 1.547372 GGTCTTACGGTTAGCAGGTGA 59.453 52.381 0.00 0.00 0.00 4.02
716 736 1.549170 AGGTCTTACGGTTAGCAGGTG 59.451 52.381 0.00 0.00 0.00 4.00
717 737 1.549170 CAGGTCTTACGGTTAGCAGGT 59.451 52.381 0.00 0.00 0.00 4.00
718 738 1.822990 TCAGGTCTTACGGTTAGCAGG 59.177 52.381 0.00 0.00 0.00 4.85
719 739 3.381908 AGATCAGGTCTTACGGTTAGCAG 59.618 47.826 0.00 0.00 31.47 4.24
720 740 3.362706 AGATCAGGTCTTACGGTTAGCA 58.637 45.455 0.00 0.00 31.47 3.49
721 741 4.388378 AAGATCAGGTCTTACGGTTAGC 57.612 45.455 0.00 0.00 45.28 3.09
743 763 8.949421 TGCTCCTTAGAGGGAAGAAAATTATAT 58.051 33.333 0.00 0.00 40.79 0.86
744 764 8.211629 GTGCTCCTTAGAGGGAAGAAAATTATA 58.788 37.037 0.00 0.00 40.79 0.98
745 765 7.057264 GTGCTCCTTAGAGGGAAGAAAATTAT 58.943 38.462 0.00 0.00 40.79 1.28
746 766 6.012858 TGTGCTCCTTAGAGGGAAGAAAATTA 60.013 38.462 0.00 0.00 40.79 1.40
747 767 5.222130 TGTGCTCCTTAGAGGGAAGAAAATT 60.222 40.000 0.00 0.00 40.79 1.82
748 768 4.289672 TGTGCTCCTTAGAGGGAAGAAAAT 59.710 41.667 0.00 0.00 40.79 1.82
749 769 3.650942 TGTGCTCCTTAGAGGGAAGAAAA 59.349 43.478 0.00 0.00 40.79 2.29
750 770 3.008049 GTGTGCTCCTTAGAGGGAAGAAA 59.992 47.826 0.00 0.00 40.79 2.52
751 771 2.567615 GTGTGCTCCTTAGAGGGAAGAA 59.432 50.000 0.00 0.00 40.79 2.52
752 772 2.180276 GTGTGCTCCTTAGAGGGAAGA 58.820 52.381 0.00 0.00 40.79 2.87
753 773 1.208293 GGTGTGCTCCTTAGAGGGAAG 59.792 57.143 0.00 0.00 40.79 3.46
754 774 1.276622 GGTGTGCTCCTTAGAGGGAA 58.723 55.000 0.00 0.00 40.79 3.97
755 775 0.970937 CGGTGTGCTCCTTAGAGGGA 60.971 60.000 0.00 0.00 40.79 4.20
756 776 1.517832 CGGTGTGCTCCTTAGAGGG 59.482 63.158 0.00 0.00 40.79 4.30
757 777 1.517832 CCGGTGTGCTCCTTAGAGG 59.482 63.158 0.00 0.00 40.79 3.69
777 797 0.104855 GGGCTGCTCGTCATATCACA 59.895 55.000 0.00 0.00 0.00 3.58
812 832 2.750237 GCCCCATCCAACCGTCAC 60.750 66.667 0.00 0.00 0.00 3.67
833 853 2.035632 ACAATGGTCTCGGATCTCTCC 58.964 52.381 0.00 0.00 38.29 3.71
835 855 2.419297 GCAACAATGGTCTCGGATCTCT 60.419 50.000 0.00 0.00 0.00 3.10
836 856 1.936547 GCAACAATGGTCTCGGATCTC 59.063 52.381 0.00 0.00 0.00 2.75
837 857 1.556911 AGCAACAATGGTCTCGGATCT 59.443 47.619 0.00 0.00 29.35 2.75
838 858 2.029838 AGCAACAATGGTCTCGGATC 57.970 50.000 0.00 0.00 29.35 3.36
839 859 2.496899 AAGCAACAATGGTCTCGGAT 57.503 45.000 0.00 0.00 35.91 4.18
844 864 5.473504 ACGAATCTTAAAGCAACAATGGTCT 59.526 36.000 0.00 0.00 35.91 3.85
845 865 5.699839 ACGAATCTTAAAGCAACAATGGTC 58.300 37.500 0.00 0.00 35.91 4.02
846 866 5.705609 ACGAATCTTAAAGCAACAATGGT 57.294 34.783 0.00 0.00 39.43 3.55
847 867 7.253750 GCAATACGAATCTTAAAGCAACAATGG 60.254 37.037 0.00 0.00 0.00 3.16
849 869 6.751888 GGCAATACGAATCTTAAAGCAACAAT 59.248 34.615 0.00 0.00 0.00 2.71
850 870 6.090129 GGCAATACGAATCTTAAAGCAACAA 58.910 36.000 0.00 0.00 0.00 2.83
882 902 2.765807 AGACCCTCTCCCGCATGG 60.766 66.667 0.00 0.00 0.00 3.66
893 913 1.056660 ACAACCAATCGTGAGACCCT 58.943 50.000 0.00 0.00 46.97 4.34
894 914 1.156736 CACAACCAATCGTGAGACCC 58.843 55.000 0.00 0.00 46.97 4.46
911 2267 0.452987 TGTACTACCGGATCGTGCAC 59.547 55.000 9.46 6.82 0.00 4.57
965 2323 0.107081 TCTTCCCGTCGAAAGCCAAA 59.893 50.000 0.00 0.00 0.00 3.28
1069 2427 0.459411 GCGGTTGAGAGAGAAGAGGC 60.459 60.000 0.00 0.00 0.00 4.70
1107 2465 1.669440 GCGGTGGTGGACAAGAGTA 59.331 57.895 0.00 0.00 0.00 2.59
1202 2566 4.631740 TGCCCCAGTGGTCGGAGA 62.632 66.667 8.74 0.00 36.04 3.71
1534 2898 2.301346 GGTCATGGGTCATGGATTGTC 58.699 52.381 7.88 0.00 41.66 3.18
1537 2901 1.307878 TGGGTCATGGGTCATGGATT 58.692 50.000 7.88 0.00 41.66 3.01
1546 2910 2.105477 AGAAAGATCGATGGGTCATGGG 59.895 50.000 0.54 0.00 0.00 4.00
1551 2915 3.543680 TCCAAGAAAGATCGATGGGTC 57.456 47.619 0.54 0.00 37.75 4.46
1552 2916 4.301072 TTTCCAAGAAAGATCGATGGGT 57.699 40.909 0.54 0.00 37.75 4.51
1553 2917 4.037208 CCATTTCCAAGAAAGATCGATGGG 59.963 45.833 0.54 0.00 37.75 4.00
1554 2918 4.498682 GCCATTTCCAAGAAAGATCGATGG 60.499 45.833 0.54 0.00 38.22 3.51
1556 2920 4.272489 TGCCATTTCCAAGAAAGATCGAT 58.728 39.130 0.00 0.00 0.00 3.59
1558 2922 3.441572 ACTGCCATTTCCAAGAAAGATCG 59.558 43.478 0.00 0.00 0.00 3.69
1559 2923 4.381292 CCACTGCCATTTCCAAGAAAGATC 60.381 45.833 0.00 0.00 0.00 2.75
1560 2924 3.512724 CCACTGCCATTTCCAAGAAAGAT 59.487 43.478 0.00 0.00 0.00 2.40
1561 2925 2.892852 CCACTGCCATTTCCAAGAAAGA 59.107 45.455 0.00 0.00 0.00 2.52
1562 2926 2.611224 GCCACTGCCATTTCCAAGAAAG 60.611 50.000 0.00 0.00 0.00 2.62
1827 3203 1.542547 GCGTTGACTCCCTCTTTGGAA 60.543 52.381 0.00 0.00 38.35 3.53
1828 3204 0.034896 GCGTTGACTCCCTCTTTGGA 59.965 55.000 0.00 0.00 38.35 3.53
1835 3211 4.379243 CGCTGGCGTTGACTCCCT 62.379 66.667 6.83 0.00 34.35 4.20
2025 3408 3.222354 GACGTGCGAGGGGAACAGT 62.222 63.158 0.00 0.00 0.00 3.55
2124 3523 5.874810 CCACGTCTCATAGAATTCTTTTCCA 59.125 40.000 14.36 0.00 0.00 3.53
2125 3524 5.220681 GCCACGTCTCATAGAATTCTTTTCC 60.221 44.000 14.36 0.00 0.00 3.13
2126 3525 5.351465 TGCCACGTCTCATAGAATTCTTTTC 59.649 40.000 14.36 0.00 0.00 2.29
2127 3526 5.245531 TGCCACGTCTCATAGAATTCTTTT 58.754 37.500 14.36 0.00 0.00 2.27
2128 3527 4.832248 TGCCACGTCTCATAGAATTCTTT 58.168 39.130 14.36 2.41 0.00 2.52
2129 3528 4.471904 TGCCACGTCTCATAGAATTCTT 57.528 40.909 14.36 0.00 0.00 2.52
2130 3529 4.679373 ATGCCACGTCTCATAGAATTCT 57.321 40.909 13.56 13.56 0.00 2.40
2131 3530 4.811024 TGAATGCCACGTCTCATAGAATTC 59.189 41.667 0.00 0.00 0.00 2.17
2132 3531 4.769688 TGAATGCCACGTCTCATAGAATT 58.230 39.130 0.00 0.00 0.00 2.17
2133 3532 4.406648 TGAATGCCACGTCTCATAGAAT 57.593 40.909 0.00 0.00 0.00 2.40
2134 3533 3.885724 TGAATGCCACGTCTCATAGAA 57.114 42.857 0.00 0.00 0.00 2.10
2135 3534 5.529581 TTATGAATGCCACGTCTCATAGA 57.470 39.130 0.00 0.00 33.51 1.98
2136 3535 6.424812 TGATTTATGAATGCCACGTCTCATAG 59.575 38.462 0.00 0.00 33.51 2.23
2137 3536 6.202762 GTGATTTATGAATGCCACGTCTCATA 59.797 38.462 0.00 0.00 31.20 2.15
2138 3537 5.008019 GTGATTTATGAATGCCACGTCTCAT 59.992 40.000 0.00 0.00 33.26 2.90
2139 3538 4.332543 GTGATTTATGAATGCCACGTCTCA 59.667 41.667 0.00 0.00 0.00 3.27
2140 3539 4.332543 TGTGATTTATGAATGCCACGTCTC 59.667 41.667 0.00 0.00 0.00 3.36
2141 3540 4.260985 TGTGATTTATGAATGCCACGTCT 58.739 39.130 0.00 0.00 0.00 4.18
2142 3541 4.614555 TGTGATTTATGAATGCCACGTC 57.385 40.909 0.00 0.00 0.00 4.34
2143 3542 5.048083 ACTTTGTGATTTATGAATGCCACGT 60.048 36.000 0.00 0.00 0.00 4.49
2144 3543 5.401550 ACTTTGTGATTTATGAATGCCACG 58.598 37.500 0.00 0.00 0.00 4.94
2145 3544 7.649306 GGATACTTTGTGATTTATGAATGCCAC 59.351 37.037 0.00 0.00 0.00 5.01
2146 3545 7.715657 GGATACTTTGTGATTTATGAATGCCA 58.284 34.615 0.00 0.00 0.00 4.92
2166 3565 1.201424 AAGTGGGGGACGAAGGATAC 58.799 55.000 0.00 0.00 0.00 2.24
2167 3566 2.852714 TAAGTGGGGGACGAAGGATA 57.147 50.000 0.00 0.00 0.00 2.59
2168 3567 1.961133 TTAAGTGGGGGACGAAGGAT 58.039 50.000 0.00 0.00 0.00 3.24
2169 3568 1.732117 TTTAAGTGGGGGACGAAGGA 58.268 50.000 0.00 0.00 0.00 3.36
2170 3569 2.572209 TTTTAAGTGGGGGACGAAGG 57.428 50.000 0.00 0.00 0.00 3.46
2171 3570 3.681593 TGATTTTAAGTGGGGGACGAAG 58.318 45.455 0.00 0.00 0.00 3.79
2172 3571 3.791953 TGATTTTAAGTGGGGGACGAA 57.208 42.857 0.00 0.00 0.00 3.85
2173 3572 3.791953 TTGATTTTAAGTGGGGGACGA 57.208 42.857 0.00 0.00 0.00 4.20
2174 3573 4.013728 TCATTGATTTTAAGTGGGGGACG 58.986 43.478 0.00 0.00 0.00 4.79
2175 3574 5.714806 TCTTCATTGATTTTAAGTGGGGGAC 59.285 40.000 0.00 0.00 0.00 4.46
2176 3575 5.898120 TCTTCATTGATTTTAAGTGGGGGA 58.102 37.500 0.00 0.00 0.00 4.81
2177 3576 6.437162 TCTTCTTCATTGATTTTAAGTGGGGG 59.563 38.462 0.00 0.00 0.00 5.40
2178 3577 7.394359 TCTCTTCTTCATTGATTTTAAGTGGGG 59.606 37.037 0.00 0.00 0.00 4.96
2179 3578 8.340618 TCTCTTCTTCATTGATTTTAAGTGGG 57.659 34.615 0.00 0.00 0.00 4.61
2190 3589 9.850628 CAAAGCATTTAATCTCTTCTTCATTGA 57.149 29.630 0.00 0.00 35.03 2.57
2191 3590 9.635520 ACAAAGCATTTAATCTCTTCTTCATTG 57.364 29.630 0.00 0.00 35.03 2.82
2192 3591 9.635520 CACAAAGCATTTAATCTCTTCTTCATT 57.364 29.630 0.00 0.00 35.03 2.57
2193 3592 9.017509 TCACAAAGCATTTAATCTCTTCTTCAT 57.982 29.630 0.00 0.00 35.03 2.57
2194 3593 8.394971 TCACAAAGCATTTAATCTCTTCTTCA 57.605 30.769 0.00 0.00 35.03 3.02
2195 3594 9.852091 AATCACAAAGCATTTAATCTCTTCTTC 57.148 29.630 0.00 0.00 35.03 2.87
2197 3596 9.635520 CAAATCACAAAGCATTTAATCTCTTCT 57.364 29.630 0.00 0.00 35.03 2.85
2198 3597 9.415544 ACAAATCACAAAGCATTTAATCTCTTC 57.584 29.630 0.00 0.00 35.03 2.87
2199 3598 9.199982 CACAAATCACAAAGCATTTAATCTCTT 57.800 29.630 0.00 0.00 35.03 2.85
2200 3599 8.579006 TCACAAATCACAAAGCATTTAATCTCT 58.421 29.630 0.00 0.00 35.03 3.10
2201 3600 8.746922 TCACAAATCACAAAGCATTTAATCTC 57.253 30.769 0.00 0.00 35.03 2.75
2202 3601 9.715121 ATTCACAAATCACAAAGCATTTAATCT 57.285 25.926 0.00 0.00 35.03 2.40
2203 3602 9.749490 CATTCACAAATCACAAAGCATTTAATC 57.251 29.630 0.00 0.00 35.03 1.75
2204 3603 8.231837 GCATTCACAAATCACAAAGCATTTAAT 58.768 29.630 0.00 0.00 35.03 1.40
2205 3604 7.307870 GGCATTCACAAATCACAAAGCATTTAA 60.308 33.333 0.00 0.00 35.03 1.52
2206 3605 6.147492 GGCATTCACAAATCACAAAGCATTTA 59.853 34.615 0.00 0.00 35.03 1.40
2207 3606 5.049267 GGCATTCACAAATCACAAAGCATTT 60.049 36.000 0.00 0.00 40.26 2.32
2208 3607 4.453136 GGCATTCACAAATCACAAAGCATT 59.547 37.500 0.00 0.00 0.00 3.56
2209 3608 3.998341 GGCATTCACAAATCACAAAGCAT 59.002 39.130 0.00 0.00 0.00 3.79
2210 3609 3.181468 TGGCATTCACAAATCACAAAGCA 60.181 39.130 0.00 0.00 0.00 3.91
2211 3610 3.184986 GTGGCATTCACAAATCACAAAGC 59.815 43.478 0.00 0.00 45.39 3.51
2212 3611 4.977741 GTGGCATTCACAAATCACAAAG 57.022 40.909 0.00 0.00 45.39 2.77
2223 3622 2.093890 TGGATGACATGTGGCATTCAC 58.906 47.619 1.15 0.00 43.95 3.18
2224 3623 2.510928 TGGATGACATGTGGCATTCA 57.489 45.000 1.15 5.70 46.54 2.57
2225 3624 3.491964 CCAATGGATGACATGTGGCATTC 60.492 47.826 1.15 1.06 45.42 2.67
2226 3625 2.432874 CCAATGGATGACATGTGGCATT 59.567 45.455 1.15 0.00 45.42 3.56
2228 3627 1.476477 CCAATGGATGACATGTGGCA 58.524 50.000 1.15 0.00 40.44 4.92
2229 3628 0.748450 CCCAATGGATGACATGTGGC 59.252 55.000 1.15 0.00 40.44 5.01
2230 3629 2.026641 GTCCCAATGGATGACATGTGG 58.973 52.381 1.15 0.00 44.28 4.17
2238 3637 0.179045 GAGACCCGTCCCAATGGATG 60.179 60.000 0.00 0.00 44.28 3.51
2239 3638 0.620410 TGAGACCCGTCCCAATGGAT 60.620 55.000 0.00 0.00 44.28 3.41
2240 3639 1.229368 TGAGACCCGTCCCAATGGA 60.229 57.895 0.00 0.00 38.75 3.41
2241 3640 1.078426 GTGAGACCCGTCCCAATGG 60.078 63.158 0.00 0.00 0.00 3.16
2242 3641 1.078426 GGTGAGACCCGTCCCAATG 60.078 63.158 0.00 0.00 30.04 2.82
2243 3642 1.229529 AGGTGAGACCCGTCCCAAT 60.230 57.895 0.00 0.00 39.75 3.16
2244 3643 2.203182 AGGTGAGACCCGTCCCAA 59.797 61.111 0.00 0.00 39.75 4.12
2245 3644 2.603473 CAGGTGAGACCCGTCCCA 60.603 66.667 0.00 0.00 39.75 4.37
2246 3645 4.083862 GCAGGTGAGACCCGTCCC 62.084 72.222 0.00 0.00 39.75 4.46
2247 3646 1.255667 TTAGCAGGTGAGACCCGTCC 61.256 60.000 0.00 0.00 39.75 4.79
2248 3647 0.108756 GTTAGCAGGTGAGACCCGTC 60.109 60.000 0.00 0.00 39.75 4.79
2249 3648 1.542187 GGTTAGCAGGTGAGACCCGT 61.542 60.000 0.00 0.00 39.75 5.28
2250 3649 1.218316 GGTTAGCAGGTGAGACCCG 59.782 63.158 0.00 0.00 39.75 5.28
2251 3650 1.218316 CGGTTAGCAGGTGAGACCC 59.782 63.158 0.00 0.00 39.75 4.46
2252 3651 0.389948 CACGGTTAGCAGGTGAGACC 60.390 60.000 0.00 0.00 38.99 3.85
2253 3652 0.601558 TCACGGTTAGCAGGTGAGAC 59.398 55.000 0.00 0.00 35.89 3.36
2254 3653 3.045518 TCACGGTTAGCAGGTGAGA 57.954 52.632 0.00 0.00 35.89 3.27
2256 3655 1.476891 GATCTCACGGTTAGCAGGTGA 59.523 52.381 3.41 3.41 38.29 4.02
2257 3656 1.478510 AGATCTCACGGTTAGCAGGTG 59.521 52.381 0.00 0.00 0.00 4.00
2258 3657 1.478510 CAGATCTCACGGTTAGCAGGT 59.521 52.381 0.00 0.00 0.00 4.00
2259 3658 1.202463 CCAGATCTCACGGTTAGCAGG 60.202 57.143 0.00 0.00 0.00 4.85
2260 3659 1.478510 ACCAGATCTCACGGTTAGCAG 59.521 52.381 0.00 0.00 0.00 4.24
2261 3660 1.557099 ACCAGATCTCACGGTTAGCA 58.443 50.000 0.00 0.00 0.00 3.49
2262 3661 2.674796 AACCAGATCTCACGGTTAGC 57.325 50.000 12.98 0.00 41.22 3.09
2263 3662 4.188247 TGAAACCAGATCTCACGGTTAG 57.812 45.455 14.53 0.00 42.18 2.34
2264 3663 4.819105 ATGAAACCAGATCTCACGGTTA 57.181 40.909 14.53 3.15 42.18 2.85
2265 3664 3.703001 ATGAAACCAGATCTCACGGTT 57.297 42.857 9.60 9.60 44.90 4.44
2266 3665 6.479972 TTATATGAAACCAGATCTCACGGT 57.520 37.500 0.00 0.00 33.32 4.83
2267 3666 7.969536 AATTATATGAAACCAGATCTCACGG 57.030 36.000 0.00 0.00 0.00 4.94
2292 3691 3.551863 GCCGTGTGAATGATGTGGAAAAA 60.552 43.478 0.00 0.00 0.00 1.94
2293 3692 2.030363 GCCGTGTGAATGATGTGGAAAA 60.030 45.455 0.00 0.00 0.00 2.29
2294 3693 1.539388 GCCGTGTGAATGATGTGGAAA 59.461 47.619 0.00 0.00 0.00 3.13
2295 3694 1.164411 GCCGTGTGAATGATGTGGAA 58.836 50.000 0.00 0.00 0.00 3.53
2296 3695 1.018752 CGCCGTGTGAATGATGTGGA 61.019 55.000 0.00 0.00 0.00 4.02
2297 3696 1.425031 CGCCGTGTGAATGATGTGG 59.575 57.895 0.00 0.00 0.00 4.17
2298 3697 1.226101 GCGCCGTGTGAATGATGTG 60.226 57.895 0.00 0.00 0.00 3.21
2299 3698 2.398554 GGCGCCGTGTGAATGATGT 61.399 57.895 12.58 0.00 0.00 3.06
2300 3699 2.404789 GGCGCCGTGTGAATGATG 59.595 61.111 12.58 0.00 0.00 3.07
2301 3700 2.824041 GGGCGCCGTGTGAATGAT 60.824 61.111 22.54 0.00 0.00 2.45
2450 3869 4.811364 GGGAGCTCCAGCCCTTGC 62.811 72.222 33.29 10.33 43.38 4.01
2555 3974 0.890542 AGGTGCATTGCGTCACATGT 60.891 50.000 3.84 0.00 35.04 3.21
2571 3990 5.247110 TCTCTTCTTTCTATCAAGTGCAGGT 59.753 40.000 0.00 0.00 0.00 4.00
2573 3992 6.629128 TCTCTCTTCTTTCTATCAAGTGCAG 58.371 40.000 0.00 0.00 0.00 4.41
2584 4003 6.432403 ACAGGTTGATTCTCTCTTCTTTCT 57.568 37.500 0.00 0.00 0.00 2.52
2591 4010 5.592688 GCTCTACTACAGGTTGATTCTCTCT 59.407 44.000 0.00 0.00 0.00 3.10
2592 4011 5.221165 GGCTCTACTACAGGTTGATTCTCTC 60.221 48.000 0.00 0.00 0.00 3.20
2619 4038 2.827921 GACTGAACAAGGCCCATGAAAT 59.172 45.455 12.82 0.00 0.00 2.17
2642 4061 5.992217 ACTCACTTCAGTTTCAGTGATAACC 59.008 40.000 2.60 0.00 46.52 2.85
2646 4065 5.059833 GGAACTCACTTCAGTTTCAGTGAT 58.940 41.667 2.60 0.00 46.52 3.06
2654 4073 4.162320 TCAGAACAGGAACTCACTTCAGTT 59.838 41.667 0.00 0.00 39.43 3.16
2669 4088 2.291153 ACCATTCCCACCATCAGAACAG 60.291 50.000 0.00 0.00 0.00 3.16
2670 4089 1.710244 ACCATTCCCACCATCAGAACA 59.290 47.619 0.00 0.00 0.00 3.18
2671 4090 2.514458 ACCATTCCCACCATCAGAAC 57.486 50.000 0.00 0.00 0.00 3.01
2672 4091 2.291540 GGAACCATTCCCACCATCAGAA 60.292 50.000 0.00 0.00 44.30 3.02
2673 4092 1.284785 GGAACCATTCCCACCATCAGA 59.715 52.381 0.00 0.00 44.30 3.27
2674 4093 1.767759 GGAACCATTCCCACCATCAG 58.232 55.000 0.00 0.00 44.30 2.90
2675 4094 3.998560 GGAACCATTCCCACCATCA 57.001 52.632 0.00 0.00 44.30 3.07
2684 4103 3.441572 CACCATCAGAACAGGAACCATTC 59.558 47.826 0.00 0.00 0.00 2.67
2685 4104 3.424703 CACCATCAGAACAGGAACCATT 58.575 45.455 0.00 0.00 0.00 3.16
2686 4105 2.291153 CCACCATCAGAACAGGAACCAT 60.291 50.000 0.00 0.00 0.00 3.55
2687 4106 1.073763 CCACCATCAGAACAGGAACCA 59.926 52.381 0.00 0.00 0.00 3.67
2688 4107 1.614317 CCCACCATCAGAACAGGAACC 60.614 57.143 0.00 0.00 0.00 3.62
2689 4108 1.351017 TCCCACCATCAGAACAGGAAC 59.649 52.381 0.00 0.00 0.00 3.62
2690 4109 1.741028 TCCCACCATCAGAACAGGAA 58.259 50.000 0.00 0.00 0.00 3.36
2691 4110 1.741028 TTCCCACCATCAGAACAGGA 58.259 50.000 0.00 0.00 0.00 3.86
2692 4111 2.372264 CATTCCCACCATCAGAACAGG 58.628 52.381 0.00 0.00 0.00 4.00
2693 4112 2.291153 ACCATTCCCACCATCAGAACAG 60.291 50.000 0.00 0.00 0.00 3.16
2706 4125 5.538849 TTTTACCAGTTGAAACCATTCCC 57.461 39.130 0.00 0.00 34.49 3.97
2731 4150 4.141711 GCATCCTACCATTGTCTGAACCTA 60.142 45.833 0.00 0.00 0.00 3.08
2732 4151 3.370953 GCATCCTACCATTGTCTGAACCT 60.371 47.826 0.00 0.00 0.00 3.50
2733 4152 2.945668 GCATCCTACCATTGTCTGAACC 59.054 50.000 0.00 0.00 0.00 3.62
2735 4154 3.264193 AGTGCATCCTACCATTGTCTGAA 59.736 43.478 0.00 0.00 0.00 3.02
2737 4156 2.941064 CAGTGCATCCTACCATTGTCTG 59.059 50.000 0.00 0.00 0.00 3.51
2738 4157 2.681976 GCAGTGCATCCTACCATTGTCT 60.682 50.000 11.09 0.00 0.00 3.41
2739 4158 1.672881 GCAGTGCATCCTACCATTGTC 59.327 52.381 11.09 0.00 0.00 3.18
2815 4257 5.368989 ACTTACAAGCTTCCCATATAGCAC 58.631 41.667 0.00 0.00 39.85 4.40
2830 4272 8.186178 ACATATTGTAGAAAGCGACTTACAAG 57.814 34.615 10.87 0.00 32.07 3.16
2874 4316 5.639506 GCAGCTACACTTAGATGAAAAGACA 59.360 40.000 1.19 0.00 43.33 3.41
2875 4317 5.064071 GGCAGCTACACTTAGATGAAAAGAC 59.936 44.000 1.19 0.00 43.33 3.01
2876 4318 5.178797 GGCAGCTACACTTAGATGAAAAGA 58.821 41.667 1.19 0.00 43.33 2.52
2877 4319 4.937620 TGGCAGCTACACTTAGATGAAAAG 59.062 41.667 1.19 0.00 43.33 2.27
2878 4320 4.905429 TGGCAGCTACACTTAGATGAAAA 58.095 39.130 1.19 0.00 43.33 2.29
2879 4321 4.507710 CTGGCAGCTACACTTAGATGAAA 58.492 43.478 0.00 0.00 43.33 2.69
2880 4322 3.679917 GCTGGCAGCTACACTTAGATGAA 60.680 47.826 31.37 0.00 43.33 2.57
2881 4323 2.159043 GCTGGCAGCTACACTTAGATGA 60.159 50.000 31.37 0.00 43.33 2.92
2882 4324 2.208431 GCTGGCAGCTACACTTAGATG 58.792 52.381 31.37 0.00 43.47 2.90
2883 4325 1.833630 TGCTGGCAGCTACACTTAGAT 59.166 47.619 36.50 0.00 42.97 1.98
2884 4326 1.266178 TGCTGGCAGCTACACTTAGA 58.734 50.000 36.50 13.45 42.97 2.10
2885 4327 2.322355 ATGCTGGCAGCTACACTTAG 57.678 50.000 36.50 0.00 42.97 2.18
2886 4328 2.632377 GAATGCTGGCAGCTACACTTA 58.368 47.619 36.50 17.82 42.97 2.24
2887 4329 1.457346 GAATGCTGGCAGCTACACTT 58.543 50.000 36.50 21.96 42.97 3.16
2888 4330 0.742281 CGAATGCTGGCAGCTACACT 60.742 55.000 36.50 18.06 42.97 3.55
2889 4331 0.740868 TCGAATGCTGGCAGCTACAC 60.741 55.000 36.50 23.42 42.97 2.90
2890 4332 0.460811 CTCGAATGCTGGCAGCTACA 60.461 55.000 36.50 20.09 42.97 2.74
2891 4333 0.460987 ACTCGAATGCTGGCAGCTAC 60.461 55.000 36.50 25.29 42.97 3.58
2892 4334 1.111277 TACTCGAATGCTGGCAGCTA 58.889 50.000 36.50 24.27 42.97 3.32
2893 4335 0.250234 TTACTCGAATGCTGGCAGCT 59.750 50.000 36.50 20.70 42.97 4.24
2894 4336 0.654683 CTTACTCGAATGCTGGCAGC 59.345 55.000 31.91 31.91 42.82 5.25
2895 4337 1.929836 GACTTACTCGAATGCTGGCAG 59.070 52.381 10.94 10.94 0.00 4.85
2896 4338 1.550524 AGACTTACTCGAATGCTGGCA 59.449 47.619 0.00 0.00 0.00 4.92
2897 4339 2.301577 AGACTTACTCGAATGCTGGC 57.698 50.000 0.00 0.00 0.00 4.85
2898 4340 4.690748 TGAAAAGACTTACTCGAATGCTGG 59.309 41.667 0.00 0.00 0.00 4.85
2899 4341 5.845985 TGAAAAGACTTACTCGAATGCTG 57.154 39.130 0.00 0.00 0.00 4.41
2900 4342 8.200792 AGATATGAAAAGACTTACTCGAATGCT 58.799 33.333 0.00 0.00 0.00 3.79
2901 4343 8.359060 AGATATGAAAAGACTTACTCGAATGC 57.641 34.615 0.00 0.00 0.00 3.56
2902 4344 9.521503 TGAGATATGAAAAGACTTACTCGAATG 57.478 33.333 0.00 0.00 0.00 2.67
2903 4345 9.743057 CTGAGATATGAAAAGACTTACTCGAAT 57.257 33.333 0.00 0.00 0.00 3.34
2904 4346 8.740906 ACTGAGATATGAAAAGACTTACTCGAA 58.259 33.333 0.00 0.00 0.00 3.71
2905 4347 8.184848 CACTGAGATATGAAAAGACTTACTCGA 58.815 37.037 0.00 0.00 0.00 4.04
2906 4348 7.971168 ACACTGAGATATGAAAAGACTTACTCG 59.029 37.037 0.00 0.00 0.00 4.18
2907 4349 9.646427 AACACTGAGATATGAAAAGACTTACTC 57.354 33.333 0.00 0.00 0.00 2.59
2911 4353 9.646427 GACTAACACTGAGATATGAAAAGACTT 57.354 33.333 0.00 0.00 0.00 3.01
2912 4354 9.030452 AGACTAACACTGAGATATGAAAAGACT 57.970 33.333 0.00 0.00 0.00 3.24
2913 4355 9.296400 GAGACTAACACTGAGATATGAAAAGAC 57.704 37.037 0.00 0.00 0.00 3.01
2914 4356 9.249053 AGAGACTAACACTGAGATATGAAAAGA 57.751 33.333 0.00 0.00 0.00 2.52
2915 4357 9.868277 AAGAGACTAACACTGAGATATGAAAAG 57.132 33.333 0.00 0.00 0.00 2.27
2916 4358 9.645059 CAAGAGACTAACACTGAGATATGAAAA 57.355 33.333 0.00 0.00 0.00 2.29
2917 4359 8.807118 ACAAGAGACTAACACTGAGATATGAAA 58.193 33.333 0.00 0.00 0.00 2.69
2918 4360 8.354711 ACAAGAGACTAACACTGAGATATGAA 57.645 34.615 0.00 0.00 0.00 2.57
2919 4361 7.946381 ACAAGAGACTAACACTGAGATATGA 57.054 36.000 0.00 0.00 0.00 2.15
2979 4421 8.806429 TTGTATCCTCTTGATGCTTCATTTTA 57.194 30.769 2.75 0.00 37.04 1.52
3006 4448 5.829062 AGGCCGGGTATATGTTTATTGTA 57.171 39.130 2.18 0.00 0.00 2.41
3012 4457 2.028876 GCAAAGGCCGGGTATATGTTT 58.971 47.619 2.18 0.00 0.00 2.83
3019 4464 0.621609 AACTATGCAAAGGCCGGGTA 59.378 50.000 2.18 0.00 40.13 3.69
3029 4474 6.183360 TGTCGGTTCATATCCTAACTATGCAA 60.183 38.462 0.00 0.00 0.00 4.08
3044 4489 0.796312 GTGCGTTGATGTCGGTTCAT 59.204 50.000 0.00 0.00 0.00 2.57
3045 4490 1.553195 CGTGCGTTGATGTCGGTTCA 61.553 55.000 0.00 0.00 0.00 3.18
3046 4491 1.129809 CGTGCGTTGATGTCGGTTC 59.870 57.895 0.00 0.00 0.00 3.62
3139 4592 3.620488 TCTGATCGCTTTAGGGCATTTT 58.380 40.909 0.00 0.00 0.00 1.82
3148 4601 4.932146 TGATCGTTGATCTGATCGCTTTA 58.068 39.130 12.65 0.00 43.10 1.85
3205 4662 2.094659 CCGCGTGGTGTCATGAGAC 61.095 63.158 14.43 14.43 45.19 3.36
3297 4754 3.783082 AGCCTAGATTCTAGCTTTGGGTT 59.217 43.478 14.23 0.00 29.27 4.11
3331 4788 1.207089 TCGGAATGCTCGGACTGATTT 59.793 47.619 0.00 0.00 0.00 2.17
3471 4929 3.130633 CGACAACACCTGAATGACTTCA 58.869 45.455 0.00 0.00 39.07 3.02
3536 4994 4.782691 TGGAGTTTTGATACAGAGGGATGA 59.217 41.667 0.00 0.00 0.00 2.92
3547 5005 5.417580 GCAAACTATGGGTGGAGTTTTGATA 59.582 40.000 0.00 0.00 41.93 2.15
3553 5011 2.969821 TGCAAACTATGGGTGGAGTT 57.030 45.000 0.00 0.00 37.50 3.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.