Multiple sequence alignment - TraesCS5A01G239000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G239000 chr5A 100.000 2312 0 0 1 2312 455092004 455094315 0.000000e+00 4270.0
1 TraesCS5A01G239000 chr5A 93.921 329 18 2 1983 2310 455111253 455111580 1.600000e-136 496.0
2 TraesCS5A01G239000 chr5A 93.030 330 21 2 1985 2312 375941349 375941020 4.470000e-132 481.0
3 TraesCS5A01G239000 chr5D 89.232 1133 77 24 749 1857 354262536 354263647 0.000000e+00 1375.0
4 TraesCS5A01G239000 chr5D 86.585 738 37 17 1 714 354261832 354262531 0.000000e+00 758.0
5 TraesCS5A01G239000 chr5D 90.625 64 3 3 1 63 6168094 6168033 5.290000e-12 82.4
6 TraesCS5A01G239000 chr5D 90.625 64 3 3 1 63 6267128 6267067 5.290000e-12 82.4
7 TraesCS5A01G239000 chr5D 90.625 64 3 3 1 63 12937943 12938004 5.290000e-12 82.4
8 TraesCS5A01G239000 chr5D 90.625 64 3 3 1 63 329159124 329159063 5.290000e-12 82.4
9 TraesCS5A01G239000 chr5D 90.625 64 3 3 1 63 503300756 503300817 5.290000e-12 82.4
10 TraesCS5A01G239000 chr5B 89.264 1006 68 21 774 1744 418509198 418510198 0.000000e+00 1223.0
11 TraesCS5A01G239000 chr5B 86.034 716 42 12 9 707 418508502 418509176 0.000000e+00 715.0
12 TraesCS5A01G239000 chr6A 94.190 327 18 1 1983 2309 444587709 444588034 4.440000e-137 497.0
13 TraesCS5A01G239000 chr6A 85.135 74 9 2 1679 1751 184713584 184713512 8.860000e-10 75.0
14 TraesCS5A01G239000 chr2A 93.617 329 20 1 1985 2312 152379072 152379400 7.420000e-135 490.0
15 TraesCS5A01G239000 chr7A 93.333 330 20 2 1983 2311 128230636 128230308 9.600000e-134 486.0
16 TraesCS5A01G239000 chr7A 93.272 327 20 2 1983 2309 440019703 440019379 4.470000e-132 481.0
17 TraesCS5A01G239000 chr3A 93.272 327 21 1 1983 2309 464403924 464404249 4.470000e-132 481.0
18 TraesCS5A01G239000 chr3A 92.727 330 22 1 1985 2312 205017450 205017121 2.080000e-130 475.0
19 TraesCS5A01G239000 chr4A 93.272 327 19 2 1985 2309 213302123 213301798 1.610000e-131 479.0
20 TraesCS5A01G239000 chr4A 79.762 168 22 10 1657 1817 535481939 535481777 6.750000e-21 111.0
21 TraesCS5A01G239000 chr4D 90.476 63 5 1 1 63 207038061 207038000 5.290000e-12 82.4
22 TraesCS5A01G239000 chr1D 90.625 64 3 3 1 63 254443888 254443949 5.290000e-12 82.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G239000 chr5A 455092004 455094315 2311 False 4270.0 4270 100.0000 1 2312 1 chr5A.!!$F1 2311
1 TraesCS5A01G239000 chr5D 354261832 354263647 1815 False 1066.5 1375 87.9085 1 1857 2 chr5D.!!$F3 1856
2 TraesCS5A01G239000 chr5B 418508502 418510198 1696 False 969.0 1223 87.6490 9 1744 2 chr5B.!!$F1 1735

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
726 753 0.029567 CCGGAGCTAGCTAGTCGTTG 59.97 60.0 19.38 6.82 0.0 4.1 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2056 2136 0.030908 GAGAGTTAGGGCGTGGATCG 59.969 60.0 0.0 0.0 43.12 3.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
97 98 9.378551 CATGTAGGCTATAACTTTGTTTGTAGA 57.621 33.333 0.00 0.00 0.00 2.59
98 99 8.997621 TGTAGGCTATAACTTTGTTTGTAGAG 57.002 34.615 0.00 0.00 0.00 2.43
99 100 8.591072 TGTAGGCTATAACTTTGTTTGTAGAGT 58.409 33.333 0.00 0.00 0.00 3.24
101 102 8.999220 AGGCTATAACTTTGTTTGTAGAGTAC 57.001 34.615 0.00 0.00 0.00 2.73
102 103 8.813951 AGGCTATAACTTTGTTTGTAGAGTACT 58.186 33.333 0.00 0.00 0.00 2.73
108 109 6.990798 ACTTTGTTTGTAGAGTACTACTCCC 58.009 40.000 11.94 4.93 46.18 4.30
109 110 6.781507 ACTTTGTTTGTAGAGTACTACTCCCT 59.218 38.462 11.94 0.00 46.18 4.20
110 111 6.830873 TTGTTTGTAGAGTACTACTCCCTC 57.169 41.667 11.94 4.79 46.18 4.30
111 112 5.884322 TGTTTGTAGAGTACTACTCCCTCA 58.116 41.667 11.94 6.94 46.18 3.86
112 113 5.944599 TGTTTGTAGAGTACTACTCCCTCAG 59.055 44.000 11.94 0.00 46.18 3.35
113 114 5.775813 TTGTAGAGTACTACTCCCTCAGT 57.224 43.478 11.94 0.00 46.18 3.41
114 115 5.100344 TGTAGAGTACTACTCCCTCAGTG 57.900 47.826 11.94 0.00 46.18 3.66
115 116 3.655615 AGAGTACTACTCCCTCAGTGG 57.344 52.381 11.94 0.00 46.18 4.00
116 117 4.686670 GTAGAGTACTACTCCCTCAGTGGG 60.687 54.167 11.94 0.39 46.18 4.61
117 118 7.672944 GTAGAGTACTACTCCCTCAGTGGGG 62.673 56.000 11.94 0.34 46.18 4.96
171 172 6.374417 AGAAGAGCCTGGAAGTTATGTTTA 57.626 37.500 0.00 0.00 0.00 2.01
199 201 6.991485 ATGCTACGTTTTCATGTTTTTCAG 57.009 33.333 0.00 0.00 0.00 3.02
204 206 7.220108 GCTACGTTTTCATGTTTTTCAGAAACT 59.780 33.333 0.00 0.00 31.40 2.66
213 216 1.691196 TTTCAGAAACTGCAGTGGGG 58.309 50.000 22.49 10.77 0.00 4.96
263 266 2.622942 GTGCCTGGACTTTGATTGTTCA 59.377 45.455 0.00 0.00 0.00 3.18
265 268 3.256383 TGCCTGGACTTTGATTGTTCATG 59.744 43.478 0.00 0.00 0.00 3.07
279 283 2.203001 CATGGTGGCGCGGATGTA 60.203 61.111 8.83 0.00 0.00 2.29
299 303 8.162880 GGATGTATATAAGACGCTTCAATTTCG 58.837 37.037 0.00 0.00 0.00 3.46
355 359 1.135489 CCCGAAGAATCTTCGACACGA 60.135 52.381 37.50 0.00 43.97 4.35
356 360 2.479730 CCCGAAGAATCTTCGACACGAT 60.480 50.000 37.50 0.00 43.97 3.73
426 432 6.038356 GCATGGTTATCAGGTCAGATTTTTG 58.962 40.000 0.00 0.00 0.00 2.44
429 435 6.068010 TGGTTATCAGGTCAGATTTTTGTGT 58.932 36.000 0.00 0.00 0.00 3.72
479 491 1.139989 CGCATCTTATGTGCCGGTAG 58.860 55.000 1.90 0.00 39.39 3.18
575 600 2.312722 TTCCTTCAACGACCGTTCAA 57.687 45.000 4.68 0.00 36.00 2.69
583 608 6.256975 CCTTCAACGACCGTTCAATTATATGA 59.743 38.462 4.68 0.00 36.00 2.15
586 611 7.207383 TCAACGACCGTTCAATTATATGATCT 58.793 34.615 4.68 0.00 36.00 2.75
587 612 8.354426 TCAACGACCGTTCAATTATATGATCTA 58.646 33.333 4.68 0.00 36.00 1.98
588 613 8.425491 CAACGACCGTTCAATTATATGATCTAC 58.575 37.037 4.68 0.00 36.00 2.59
589 614 7.654568 ACGACCGTTCAATTATATGATCTACA 58.345 34.615 0.00 0.00 0.00 2.74
590 615 7.808381 ACGACCGTTCAATTATATGATCTACAG 59.192 37.037 0.00 0.00 0.00 2.74
620 645 9.541724 CAATATTATTCCAACCGATTTCGTATG 57.458 33.333 0.00 0.00 37.74 2.39
638 665 4.027621 CGTATGCGTCCATATATTCTTCGC 60.028 45.833 11.71 11.71 41.98 4.70
682 709 2.723273 TCTCTTATCTGTCTGCGTCCA 58.277 47.619 0.00 0.00 0.00 4.02
684 711 3.316588 TCTCTTATCTGTCTGCGTCCATC 59.683 47.826 0.00 0.00 0.00 3.51
687 714 2.522836 ATCTGTCTGCGTCCATCATC 57.477 50.000 0.00 0.00 0.00 2.92
714 741 1.608590 CACAACAAAATCACCGGAGCT 59.391 47.619 9.46 0.00 0.00 4.09
716 743 3.074412 ACAACAAAATCACCGGAGCTAG 58.926 45.455 9.46 0.00 0.00 3.42
717 744 1.739067 ACAAAATCACCGGAGCTAGC 58.261 50.000 9.46 6.62 0.00 3.42
718 745 1.279271 ACAAAATCACCGGAGCTAGCT 59.721 47.619 19.45 19.45 0.00 3.32
720 747 3.126831 CAAAATCACCGGAGCTAGCTAG 58.873 50.000 19.38 16.84 0.00 3.42
722 749 1.611519 ATCACCGGAGCTAGCTAGTC 58.388 55.000 19.38 16.31 0.00 2.59
724 751 1.096386 CACCGGAGCTAGCTAGTCGT 61.096 60.000 19.38 8.77 0.00 4.34
725 752 0.394080 ACCGGAGCTAGCTAGTCGTT 60.394 55.000 19.38 8.00 0.00 3.85
726 753 0.029567 CCGGAGCTAGCTAGTCGTTG 59.970 60.000 19.38 6.82 0.00 4.10
727 754 0.592754 CGGAGCTAGCTAGTCGTTGC 60.593 60.000 19.38 7.43 0.00 4.17
729 756 1.948145 GGAGCTAGCTAGTCGTTGCTA 59.052 52.381 19.38 0.00 40.35 3.49
730 757 2.358267 GGAGCTAGCTAGTCGTTGCTAA 59.642 50.000 19.38 0.00 40.65 3.09
732 759 3.018149 AGCTAGCTAGTCGTTGCTAACT 58.982 45.455 17.69 3.72 40.65 2.24
733 760 3.444388 AGCTAGCTAGTCGTTGCTAACTT 59.556 43.478 17.69 0.00 40.65 2.66
734 761 4.639310 AGCTAGCTAGTCGTTGCTAACTTA 59.361 41.667 17.69 0.00 40.65 2.24
736 763 5.626132 GCTAGCTAGTCGTTGCTAACTTATC 59.374 44.000 21.62 0.00 40.65 1.75
740 767 5.456173 GCTAGTCGTTGCTAACTTATCTGTC 59.544 44.000 0.00 0.00 0.00 3.51
743 770 5.634020 AGTCGTTGCTAACTTATCTGTCAAC 59.366 40.000 0.00 0.00 0.00 3.18
744 771 5.404366 GTCGTTGCTAACTTATCTGTCAACA 59.596 40.000 0.00 0.00 33.89 3.33
745 772 6.090898 GTCGTTGCTAACTTATCTGTCAACAT 59.909 38.462 0.00 0.00 33.89 2.71
746 773 7.274904 GTCGTTGCTAACTTATCTGTCAACATA 59.725 37.037 0.00 0.00 33.89 2.29
747 774 7.488150 TCGTTGCTAACTTATCTGTCAACATAG 59.512 37.037 0.00 0.00 33.89 2.23
748 775 7.402640 GTTGCTAACTTATCTGTCAACATAGC 58.597 38.462 0.00 0.00 34.28 2.97
749 776 6.639563 TGCTAACTTATCTGTCAACATAGCA 58.360 36.000 7.80 7.80 40.42 3.49
750 777 7.275183 TGCTAACTTATCTGTCAACATAGCAT 58.725 34.615 7.80 0.00 38.52 3.79
751 778 7.770433 TGCTAACTTATCTGTCAACATAGCATT 59.230 33.333 7.80 0.00 38.52 3.56
752 779 8.616076 GCTAACTTATCTGTCAACATAGCATTT 58.384 33.333 0.00 0.00 34.78 2.32
753 780 9.926751 CTAACTTATCTGTCAACATAGCATTTG 57.073 33.333 0.00 0.00 0.00 2.32
754 781 7.325660 ACTTATCTGTCAACATAGCATTTGG 57.674 36.000 0.00 0.00 0.00 3.28
755 782 6.319658 ACTTATCTGTCAACATAGCATTTGGG 59.680 38.462 0.00 0.00 0.00 4.12
756 783 2.754552 TCTGTCAACATAGCATTTGGGC 59.245 45.455 0.00 0.00 0.00 5.36
757 784 1.472082 TGTCAACATAGCATTTGGGCG 59.528 47.619 0.00 0.00 39.27 6.13
758 785 1.472480 GTCAACATAGCATTTGGGCGT 59.528 47.619 0.00 0.00 39.27 5.68
759 786 2.680841 GTCAACATAGCATTTGGGCGTA 59.319 45.455 0.00 0.00 39.27 4.42
760 787 3.127895 GTCAACATAGCATTTGGGCGTAA 59.872 43.478 0.00 0.00 39.27 3.18
761 788 3.376859 TCAACATAGCATTTGGGCGTAAG 59.623 43.478 0.00 0.00 39.27 2.34
762 789 2.999331 ACATAGCATTTGGGCGTAAGT 58.001 42.857 0.00 0.00 39.27 2.24
763 790 3.352648 ACATAGCATTTGGGCGTAAGTT 58.647 40.909 0.00 0.00 39.27 2.66
764 791 3.761752 ACATAGCATTTGGGCGTAAGTTT 59.238 39.130 0.00 0.00 39.27 2.66
765 792 4.944930 ACATAGCATTTGGGCGTAAGTTTA 59.055 37.500 0.00 0.00 39.27 2.01
766 793 5.592688 ACATAGCATTTGGGCGTAAGTTTAT 59.407 36.000 0.00 0.00 39.27 1.40
767 794 4.370364 AGCATTTGGGCGTAAGTTTATG 57.630 40.909 0.00 0.00 39.27 1.90
768 795 3.761752 AGCATTTGGGCGTAAGTTTATGT 59.238 39.130 0.00 0.00 39.27 2.29
769 796 4.944930 AGCATTTGGGCGTAAGTTTATGTA 59.055 37.500 0.00 0.00 39.27 2.29
770 797 5.032220 GCATTTGGGCGTAAGTTTATGTAC 58.968 41.667 0.00 0.00 41.68 2.90
771 798 5.163693 GCATTTGGGCGTAAGTTTATGTACT 60.164 40.000 0.00 0.00 41.68 2.73
772 799 5.866335 TTTGGGCGTAAGTTTATGTACTG 57.134 39.130 0.00 0.00 41.68 2.74
803 830 4.186159 TCTCCGTGTTTTAATCCGAATCC 58.814 43.478 0.00 0.00 0.00 3.01
872 899 3.511540 TCCATCTCGTCATATCCATGTCC 59.488 47.826 0.00 0.00 33.57 4.02
892 926 4.515567 GTCCATTATTTCTTCCCACGGATC 59.484 45.833 0.00 0.00 0.00 3.36
975 1009 3.120792 CGGTCCGACACATATTAAGTGG 58.879 50.000 4.91 0.00 41.21 4.00
983 1017 5.121611 CGACACATATTAAGTGGAAGCACAA 59.878 40.000 4.28 0.00 41.21 3.33
985 1019 7.011016 CGACACATATTAAGTGGAAGCACAATA 59.989 37.037 4.28 0.00 41.21 1.90
987 1021 7.134815 CACATATTAAGTGGAAGCACAATAGC 58.865 38.462 0.00 0.00 33.43 2.97
1327 1361 1.866063 GCTAGAAACGGAGCAGATCGG 60.866 57.143 0.00 0.00 38.62 4.18
1410 1454 3.050619 CGTTGTAGCTAGAATAAGGCCG 58.949 50.000 6.60 0.93 0.00 6.13
1437 1481 4.396166 CAGATGCGGAAAGTGAACCTTATT 59.604 41.667 0.00 0.00 31.48 1.40
1452 1507 8.841300 GTGAACCTTATTTCTGTCTTCTTTTCT 58.159 33.333 0.00 0.00 0.00 2.52
1462 1517 7.470289 TCTGTCTTCTTTTCTTTTTCTCTCG 57.530 36.000 0.00 0.00 0.00 4.04
1499 1554 4.260784 GCACGGAAATAATAGAAGGTGCAG 60.261 45.833 7.83 0.00 46.32 4.41
1522 1577 0.611200 TGGCTTAGCGCAAGTAAGGA 59.389 50.000 11.47 0.00 41.67 3.36
1529 1584 1.000145 GCGCAAGTAAGGAGTAGTGC 59.000 55.000 0.30 0.00 41.68 4.40
1550 1609 3.487574 GCTGTAGTACTCGCTTTATGCAG 59.512 47.826 0.00 0.00 43.06 4.41
1571 1630 5.329493 CAGTCGCATGCATGGAATAATATG 58.671 41.667 27.34 11.14 0.00 1.78
1578 1637 7.541162 GCATGCATGGAATAATATGTGTATGT 58.459 34.615 27.34 0.00 0.00 2.29
1816 1894 5.957842 TCAAATACCTTGAATTGCGAGTT 57.042 34.783 0.00 0.00 41.21 3.01
1847 1927 6.768483 TGATGGAGTTTGAGAATGAACAGTA 58.232 36.000 0.00 0.00 0.00 2.74
1848 1928 7.397221 TGATGGAGTTTGAGAATGAACAGTAT 58.603 34.615 0.00 0.00 0.00 2.12
1853 1933 7.239166 AGTTTGAGAATGAACAGTATATGCG 57.761 36.000 0.00 0.00 0.00 4.73
1854 1934 7.041721 AGTTTGAGAATGAACAGTATATGCGA 58.958 34.615 0.00 0.00 0.00 5.10
1855 1935 7.712639 AGTTTGAGAATGAACAGTATATGCGAT 59.287 33.333 0.00 0.00 0.00 4.58
1856 1936 7.412137 TTGAGAATGAACAGTATATGCGATG 57.588 36.000 0.00 0.00 0.00 3.84
1857 1937 6.748132 TGAGAATGAACAGTATATGCGATGA 58.252 36.000 0.00 0.00 0.00 2.92
1858 1938 7.209475 TGAGAATGAACAGTATATGCGATGAA 58.791 34.615 0.00 0.00 0.00 2.57
1859 1939 7.710475 TGAGAATGAACAGTATATGCGATGAAA 59.290 33.333 0.00 0.00 0.00 2.69
1860 1940 8.437360 AGAATGAACAGTATATGCGATGAAAA 57.563 30.769 0.00 0.00 0.00 2.29
1861 1941 8.554528 AGAATGAACAGTATATGCGATGAAAAG 58.445 33.333 0.00 0.00 0.00 2.27
1862 1942 6.048073 TGAACAGTATATGCGATGAAAAGC 57.952 37.500 0.00 0.00 0.00 3.51
1863 1943 5.007626 TGAACAGTATATGCGATGAAAAGCC 59.992 40.000 0.00 0.00 0.00 4.35
1864 1944 4.450976 ACAGTATATGCGATGAAAAGCCA 58.549 39.130 0.00 0.00 0.00 4.75
1865 1945 4.273480 ACAGTATATGCGATGAAAAGCCAC 59.727 41.667 0.00 0.00 0.00 5.01
1866 1946 4.273235 CAGTATATGCGATGAAAAGCCACA 59.727 41.667 0.00 0.00 0.00 4.17
1867 1947 5.049198 CAGTATATGCGATGAAAAGCCACAT 60.049 40.000 0.00 0.00 0.00 3.21
1868 1948 6.147656 CAGTATATGCGATGAAAAGCCACATA 59.852 38.462 0.00 0.00 0.00 2.29
1869 1949 6.881065 AGTATATGCGATGAAAAGCCACATAT 59.119 34.615 0.00 0.00 34.55 1.78
1870 1950 4.924305 ATGCGATGAAAAGCCACATATT 57.076 36.364 0.00 0.00 0.00 1.28
1871 1951 4.717233 TGCGATGAAAAGCCACATATTT 57.283 36.364 0.00 0.00 0.00 1.40
1872 1952 4.422840 TGCGATGAAAAGCCACATATTTG 58.577 39.130 0.00 0.00 0.00 2.32
1873 1953 4.082300 TGCGATGAAAAGCCACATATTTGT 60.082 37.500 0.00 0.00 36.15 2.83
1874 1954 4.864247 GCGATGAAAAGCCACATATTTGTT 59.136 37.500 0.00 0.00 32.34 2.83
1875 1955 5.348451 GCGATGAAAAGCCACATATTTGTTT 59.652 36.000 0.00 0.00 32.34 2.83
1876 1956 6.128580 GCGATGAAAAGCCACATATTTGTTTT 60.129 34.615 0.00 0.00 32.34 2.43
1877 1957 7.571059 GCGATGAAAAGCCACATATTTGTTTTT 60.571 33.333 0.00 0.00 32.34 1.94
1908 1988 8.885494 AGCTCTCATTTTTACTGTATCTCATC 57.115 34.615 0.00 0.00 0.00 2.92
1909 1989 8.703743 AGCTCTCATTTTTACTGTATCTCATCT 58.296 33.333 0.00 0.00 0.00 2.90
1910 1990 9.323985 GCTCTCATTTTTACTGTATCTCATCTT 57.676 33.333 0.00 0.00 0.00 2.40
1924 2004 9.832445 TGTATCTCATCTTAAAAATCTACACCC 57.168 33.333 0.00 0.00 0.00 4.61
1925 2005 9.832445 GTATCTCATCTTAAAAATCTACACCCA 57.168 33.333 0.00 0.00 0.00 4.51
1927 2007 8.737168 TCTCATCTTAAAAATCTACACCCATG 57.263 34.615 0.00 0.00 0.00 3.66
1928 2008 8.328758 TCTCATCTTAAAAATCTACACCCATGT 58.671 33.333 0.00 0.00 43.30 3.21
1929 2009 9.613428 CTCATCTTAAAAATCTACACCCATGTA 57.387 33.333 0.00 0.00 40.48 2.29
1930 2010 9.391006 TCATCTTAAAAATCTACACCCATGTAC 57.609 33.333 0.00 0.00 40.48 2.90
1931 2011 9.396022 CATCTTAAAAATCTACACCCATGTACT 57.604 33.333 0.00 0.00 40.48 2.73
1932 2012 9.975218 ATCTTAAAAATCTACACCCATGTACTT 57.025 29.630 0.00 0.00 40.48 2.24
1933 2013 9.226606 TCTTAAAAATCTACACCCATGTACTTG 57.773 33.333 1.78 1.78 40.48 3.16
1934 2014 5.897377 AAAATCTACACCCATGTACTTGC 57.103 39.130 3.24 0.00 40.48 4.01
1935 2015 2.665649 TCTACACCCATGTACTTGCG 57.334 50.000 3.24 0.00 40.48 4.85
1936 2016 1.006832 CTACACCCATGTACTTGCGC 58.993 55.000 0.00 0.00 40.48 6.09
1937 2017 0.611200 TACACCCATGTACTTGCGCT 59.389 50.000 9.73 0.00 40.48 5.92
1938 2018 0.250727 ACACCCATGTACTTGCGCTT 60.251 50.000 9.73 0.00 37.26 4.68
1939 2019 0.881118 CACCCATGTACTTGCGCTTT 59.119 50.000 9.73 0.00 0.00 3.51
1940 2020 1.269448 CACCCATGTACTTGCGCTTTT 59.731 47.619 9.73 0.00 0.00 2.27
1941 2021 1.960689 ACCCATGTACTTGCGCTTTTT 59.039 42.857 9.73 0.00 0.00 1.94
1942 2022 2.288152 ACCCATGTACTTGCGCTTTTTG 60.288 45.455 9.73 0.00 0.00 2.44
1943 2023 2.327568 CCATGTACTTGCGCTTTTTGG 58.672 47.619 9.73 2.91 0.00 3.28
1944 2024 2.030363 CCATGTACTTGCGCTTTTTGGA 60.030 45.455 9.73 0.00 0.00 3.53
1945 2025 3.367292 CCATGTACTTGCGCTTTTTGGAT 60.367 43.478 9.73 0.00 0.00 3.41
1946 2026 3.281341 TGTACTTGCGCTTTTTGGATG 57.719 42.857 9.73 0.00 0.00 3.51
1947 2027 2.621055 TGTACTTGCGCTTTTTGGATGT 59.379 40.909 9.73 0.00 0.00 3.06
1948 2028 3.815962 TGTACTTGCGCTTTTTGGATGTA 59.184 39.130 9.73 0.00 0.00 2.29
1949 2029 4.457603 TGTACTTGCGCTTTTTGGATGTAT 59.542 37.500 9.73 0.00 0.00 2.29
1950 2030 3.836949 ACTTGCGCTTTTTGGATGTATG 58.163 40.909 9.73 0.00 0.00 2.39
1951 2031 3.255642 ACTTGCGCTTTTTGGATGTATGT 59.744 39.130 9.73 0.00 0.00 2.29
1952 2032 3.214697 TGCGCTTTTTGGATGTATGTG 57.785 42.857 9.73 0.00 0.00 3.21
1953 2033 2.556189 TGCGCTTTTTGGATGTATGTGT 59.444 40.909 9.73 0.00 0.00 3.72
1954 2034 3.753797 TGCGCTTTTTGGATGTATGTGTA 59.246 39.130 9.73 0.00 0.00 2.90
1955 2035 4.397730 TGCGCTTTTTGGATGTATGTGTAT 59.602 37.500 9.73 0.00 0.00 2.29
1956 2036 5.105957 TGCGCTTTTTGGATGTATGTGTATT 60.106 36.000 9.73 0.00 0.00 1.89
1957 2037 5.804979 GCGCTTTTTGGATGTATGTGTATTT 59.195 36.000 0.00 0.00 0.00 1.40
1958 2038 6.310224 GCGCTTTTTGGATGTATGTGTATTTT 59.690 34.615 0.00 0.00 0.00 1.82
1959 2039 7.148656 GCGCTTTTTGGATGTATGTGTATTTTT 60.149 33.333 0.00 0.00 0.00 1.94
1996 2076 8.583810 TTCTAAAAGATAATGTCGGATTACGG 57.416 34.615 0.00 0.00 44.45 4.02
1997 2077 7.149973 TCTAAAAGATAATGTCGGATTACGGG 58.850 38.462 0.00 0.00 44.45 5.28
1998 2078 4.950205 AAGATAATGTCGGATTACGGGT 57.050 40.909 0.00 0.00 44.45 5.28
1999 2079 4.950205 AGATAATGTCGGATTACGGGTT 57.050 40.909 0.00 0.00 44.45 4.11
2000 2080 4.879598 AGATAATGTCGGATTACGGGTTC 58.120 43.478 0.00 0.00 44.45 3.62
2001 2081 2.320745 AATGTCGGATTACGGGTTCC 57.679 50.000 0.00 0.00 44.45 3.62
2013 2093 3.362262 GGTTCCGGCAAAACCCTC 58.638 61.111 11.64 0.00 40.29 4.30
2014 2094 1.529713 GGTTCCGGCAAAACCCTCA 60.530 57.895 11.64 0.00 40.29 3.86
2015 2095 1.110518 GGTTCCGGCAAAACCCTCAA 61.111 55.000 11.64 0.00 40.29 3.02
2016 2096 0.313987 GTTCCGGCAAAACCCTCAAG 59.686 55.000 0.00 0.00 33.26 3.02
2017 2097 0.183971 TTCCGGCAAAACCCTCAAGA 59.816 50.000 0.00 0.00 33.26 3.02
2018 2098 0.404040 TCCGGCAAAACCCTCAAGAT 59.596 50.000 0.00 0.00 33.26 2.40
2019 2099 1.203001 TCCGGCAAAACCCTCAAGATT 60.203 47.619 0.00 0.00 33.26 2.40
2020 2100 1.202348 CCGGCAAAACCCTCAAGATTC 59.798 52.381 0.00 0.00 33.26 2.52
2021 2101 1.885887 CGGCAAAACCCTCAAGATTCA 59.114 47.619 0.00 0.00 33.26 2.57
2022 2102 2.295909 CGGCAAAACCCTCAAGATTCAA 59.704 45.455 0.00 0.00 33.26 2.69
2023 2103 3.243704 CGGCAAAACCCTCAAGATTCAAA 60.244 43.478 0.00 0.00 33.26 2.69
2024 2104 4.058124 GGCAAAACCCTCAAGATTCAAAC 58.942 43.478 0.00 0.00 0.00 2.93
2025 2105 4.442753 GGCAAAACCCTCAAGATTCAAACA 60.443 41.667 0.00 0.00 0.00 2.83
2026 2106 4.507756 GCAAAACCCTCAAGATTCAAACAC 59.492 41.667 0.00 0.00 0.00 3.32
2027 2107 5.682212 GCAAAACCCTCAAGATTCAAACACT 60.682 40.000 0.00 0.00 0.00 3.55
2028 2108 5.520376 AAACCCTCAAGATTCAAACACTG 57.480 39.130 0.00 0.00 0.00 3.66
2029 2109 3.490348 ACCCTCAAGATTCAAACACTGG 58.510 45.455 0.00 0.00 0.00 4.00
2030 2110 2.821969 CCCTCAAGATTCAAACACTGGG 59.178 50.000 0.00 0.00 0.00 4.45
2031 2111 2.821969 CCTCAAGATTCAAACACTGGGG 59.178 50.000 0.00 0.00 0.00 4.96
2032 2112 3.490348 CTCAAGATTCAAACACTGGGGT 58.510 45.455 0.00 0.00 0.00 4.95
2034 2114 1.620822 AGATTCAAACACTGGGGTGC 58.379 50.000 0.00 0.00 46.57 5.01
2035 2115 0.240945 GATTCAAACACTGGGGTGCG 59.759 55.000 0.00 0.00 46.57 5.34
2036 2116 1.805428 ATTCAAACACTGGGGTGCGC 61.805 55.000 0.00 0.00 46.57 6.09
2037 2117 4.326766 CAAACACTGGGGTGCGCG 62.327 66.667 0.00 0.00 46.57 6.86
2047 2127 4.736631 GGTGCGCGCGAAGGTTTC 62.737 66.667 37.18 14.74 0.00 2.78
2048 2128 4.736631 GTGCGCGCGAAGGTTTCC 62.737 66.667 37.18 13.89 0.00 3.13
2049 2129 4.980805 TGCGCGCGAAGGTTTCCT 62.981 61.111 37.18 0.00 33.87 3.36
2050 2130 4.148645 GCGCGCGAAGGTTTCCTC 62.149 66.667 37.18 7.60 30.89 3.71
2051 2131 3.488090 CGCGCGAAGGTTTCCTCC 61.488 66.667 28.94 0.00 30.89 4.30
2052 2132 3.125573 GCGCGAAGGTTTCCTCCC 61.126 66.667 12.10 0.00 30.89 4.30
2053 2133 2.663196 CGCGAAGGTTTCCTCCCT 59.337 61.111 0.00 0.00 30.89 4.20
2054 2134 1.895238 CGCGAAGGTTTCCTCCCTA 59.105 57.895 0.00 0.00 30.89 3.53
2055 2135 0.464452 CGCGAAGGTTTCCTCCCTAT 59.536 55.000 0.00 0.00 30.89 2.57
2056 2136 1.538419 CGCGAAGGTTTCCTCCCTATC 60.538 57.143 0.00 0.00 30.89 2.08
2057 2137 1.538419 GCGAAGGTTTCCTCCCTATCG 60.538 57.143 0.00 0.00 36.53 2.92
2058 2138 2.029623 CGAAGGTTTCCTCCCTATCGA 58.970 52.381 0.00 0.00 36.02 3.59
2059 2139 2.628657 CGAAGGTTTCCTCCCTATCGAT 59.371 50.000 2.16 2.16 36.02 3.59
2060 2140 3.305471 CGAAGGTTTCCTCCCTATCGATC 60.305 52.174 0.00 0.00 36.02 3.69
2061 2141 2.610873 AGGTTTCCTCCCTATCGATCC 58.389 52.381 0.00 0.00 0.00 3.36
2062 2142 2.090719 AGGTTTCCTCCCTATCGATCCA 60.091 50.000 0.00 0.00 0.00 3.41
2063 2143 2.037381 GGTTTCCTCCCTATCGATCCAC 59.963 54.545 0.00 0.00 0.00 4.02
2064 2144 1.617322 TTCCTCCCTATCGATCCACG 58.383 55.000 0.00 0.00 44.09 4.94
2065 2145 0.894184 TCCTCCCTATCGATCCACGC 60.894 60.000 0.00 0.00 42.26 5.34
2066 2146 1.587054 CTCCCTATCGATCCACGCC 59.413 63.158 0.00 0.00 42.26 5.68
2067 2147 1.878656 CTCCCTATCGATCCACGCCC 61.879 65.000 0.00 0.00 42.26 6.13
2068 2148 1.908793 CCCTATCGATCCACGCCCT 60.909 63.158 0.00 0.00 42.26 5.19
2069 2149 0.611062 CCCTATCGATCCACGCCCTA 60.611 60.000 0.00 0.00 42.26 3.53
2070 2150 1.254026 CCTATCGATCCACGCCCTAA 58.746 55.000 0.00 0.00 42.26 2.69
2071 2151 1.067776 CCTATCGATCCACGCCCTAAC 60.068 57.143 0.00 0.00 42.26 2.34
2072 2152 1.887198 CTATCGATCCACGCCCTAACT 59.113 52.381 0.00 0.00 42.26 2.24
2073 2153 0.674534 ATCGATCCACGCCCTAACTC 59.325 55.000 0.00 0.00 42.26 3.01
2074 2154 0.395311 TCGATCCACGCCCTAACTCT 60.395 55.000 0.00 0.00 42.26 3.24
2075 2155 0.030908 CGATCCACGCCCTAACTCTC 59.969 60.000 0.00 0.00 34.51 3.20
2076 2156 1.404843 GATCCACGCCCTAACTCTCT 58.595 55.000 0.00 0.00 0.00 3.10
2077 2157 2.584236 GATCCACGCCCTAACTCTCTA 58.416 52.381 0.00 0.00 0.00 2.43
2078 2158 2.519771 TCCACGCCCTAACTCTCTAA 57.480 50.000 0.00 0.00 0.00 2.10
2079 2159 2.376109 TCCACGCCCTAACTCTCTAAG 58.624 52.381 0.00 0.00 0.00 2.18
2080 2160 1.409427 CCACGCCCTAACTCTCTAAGG 59.591 57.143 0.00 0.00 0.00 2.69
2081 2161 2.100989 CACGCCCTAACTCTCTAAGGT 58.899 52.381 0.00 0.00 0.00 3.50
2082 2162 2.099427 CACGCCCTAACTCTCTAAGGTC 59.901 54.545 0.00 0.00 0.00 3.85
2083 2163 2.025131 ACGCCCTAACTCTCTAAGGTCT 60.025 50.000 0.00 0.00 0.00 3.85
2084 2164 2.619646 CGCCCTAACTCTCTAAGGTCTC 59.380 54.545 0.00 0.00 0.00 3.36
2085 2165 2.619646 GCCCTAACTCTCTAAGGTCTCG 59.380 54.545 0.00 0.00 0.00 4.04
2086 2166 2.619646 CCCTAACTCTCTAAGGTCTCGC 59.380 54.545 0.00 0.00 0.00 5.03
2087 2167 3.280295 CCTAACTCTCTAAGGTCTCGCA 58.720 50.000 0.00 0.00 0.00 5.10
2088 2168 3.314080 CCTAACTCTCTAAGGTCTCGCAG 59.686 52.174 0.00 0.00 0.00 5.18
2089 2169 2.791347 ACTCTCTAAGGTCTCGCAGA 57.209 50.000 0.00 0.00 0.00 4.26
2090 2170 2.361789 ACTCTCTAAGGTCTCGCAGAC 58.638 52.381 7.52 7.52 44.32 3.51
2091 2171 1.329292 CTCTCTAAGGTCTCGCAGACG 59.671 57.143 9.29 0.00 45.96 4.18
2092 2172 1.066358 TCTCTAAGGTCTCGCAGACGA 60.066 52.381 9.29 0.00 45.96 4.20
2101 2181 2.172659 CGCAGACGAACTCGACGA 59.827 61.111 6.05 0.00 43.93 4.20
2102 2182 1.439858 CGCAGACGAACTCGACGAA 60.440 57.895 6.05 0.00 43.93 3.85
2103 2183 1.653920 CGCAGACGAACTCGACGAAC 61.654 60.000 6.05 0.00 43.93 3.95
2104 2184 0.385723 GCAGACGAACTCGACGAACT 60.386 55.000 6.05 0.00 43.02 3.01
2105 2185 1.593426 CAGACGAACTCGACGAACTC 58.407 55.000 6.05 0.00 43.02 3.01
2106 2186 0.163360 AGACGAACTCGACGAACTCG 59.837 55.000 20.57 20.57 44.44 4.18
2107 2187 1.387019 GACGAACTCGACGAACTCGC 61.387 60.000 21.57 13.76 42.62 5.03
2108 2188 1.439858 CGAACTCGACGAACTCGCA 60.440 57.895 13.33 0.00 42.62 5.10
2109 2189 0.995234 CGAACTCGACGAACTCGCAA 60.995 55.000 13.33 0.00 42.62 4.85
2110 2190 0.703466 GAACTCGACGAACTCGCAAG 59.297 55.000 0.00 0.00 42.62 4.01
2112 2192 0.385723 ACTCGACGAACTCGCAAGAC 60.386 55.000 0.00 0.00 45.01 3.01
2113 2193 0.385598 CTCGACGAACTCGCAAGACA 60.386 55.000 0.00 0.00 45.01 3.41
2114 2194 0.029700 TCGACGAACTCGCAAGACAA 59.970 50.000 0.00 0.00 45.01 3.18
2115 2195 0.850217 CGACGAACTCGCAAGACAAA 59.150 50.000 0.00 0.00 45.01 2.83
2116 2196 1.136884 CGACGAACTCGCAAGACAAAG 60.137 52.381 0.00 0.00 45.01 2.77
2117 2197 2.124903 GACGAACTCGCAAGACAAAGA 58.875 47.619 0.00 0.00 45.01 2.52
2118 2198 1.859080 ACGAACTCGCAAGACAAAGAC 59.141 47.619 0.00 0.00 45.01 3.01
2119 2199 1.858458 CGAACTCGCAAGACAAAGACA 59.142 47.619 0.00 0.00 45.01 3.41
2120 2200 2.347661 CGAACTCGCAAGACAAAGACAC 60.348 50.000 0.00 0.00 45.01 3.67
2121 2201 2.309528 ACTCGCAAGACAAAGACACA 57.690 45.000 0.00 0.00 45.01 3.72
2122 2202 2.627945 ACTCGCAAGACAAAGACACAA 58.372 42.857 0.00 0.00 45.01 3.33
2123 2203 2.609459 ACTCGCAAGACAAAGACACAAG 59.391 45.455 0.00 0.00 45.01 3.16
2124 2204 2.866156 CTCGCAAGACAAAGACACAAGA 59.134 45.455 0.00 0.00 45.01 3.02
2125 2205 3.466836 TCGCAAGACAAAGACACAAGAT 58.533 40.909 0.00 0.00 45.01 2.40
2126 2206 3.876914 TCGCAAGACAAAGACACAAGATT 59.123 39.130 0.00 0.00 45.01 2.40
2127 2207 4.335315 TCGCAAGACAAAGACACAAGATTT 59.665 37.500 0.00 0.00 45.01 2.17
2128 2208 5.525745 TCGCAAGACAAAGACACAAGATTTA 59.474 36.000 0.00 0.00 45.01 1.40
2129 2209 6.204688 TCGCAAGACAAAGACACAAGATTTAT 59.795 34.615 0.00 0.00 45.01 1.40
2130 2210 7.386573 TCGCAAGACAAAGACACAAGATTTATA 59.613 33.333 0.00 0.00 45.01 0.98
2131 2211 7.478667 CGCAAGACAAAGACACAAGATTTATAC 59.521 37.037 0.00 0.00 43.02 1.47
2132 2212 8.507249 GCAAGACAAAGACACAAGATTTATACT 58.493 33.333 0.00 0.00 0.00 2.12
2133 2213 9.817365 CAAGACAAAGACACAAGATTTATACTG 57.183 33.333 0.00 0.00 0.00 2.74
2134 2214 8.553459 AGACAAAGACACAAGATTTATACTGG 57.447 34.615 0.00 0.00 0.00 4.00
2135 2215 8.157476 AGACAAAGACACAAGATTTATACTGGT 58.843 33.333 0.00 0.00 0.00 4.00
2136 2216 8.691661 ACAAAGACACAAGATTTATACTGGTT 57.308 30.769 0.00 0.00 0.00 3.67
2137 2217 8.784043 ACAAAGACACAAGATTTATACTGGTTC 58.216 33.333 0.00 0.00 0.00 3.62
2138 2218 7.596749 AAGACACAAGATTTATACTGGTTCG 57.403 36.000 0.00 0.00 0.00 3.95
2139 2219 6.106673 AGACACAAGATTTATACTGGTTCGG 58.893 40.000 0.00 0.00 0.00 4.30
2140 2220 5.183228 ACACAAGATTTATACTGGTTCGGG 58.817 41.667 0.00 0.00 0.00 5.14
2141 2221 4.035208 CACAAGATTTATACTGGTTCGGGC 59.965 45.833 0.00 0.00 0.00 6.13
2142 2222 3.487120 AGATTTATACTGGTTCGGGCC 57.513 47.619 0.00 0.00 0.00 5.80
2143 2223 2.775384 AGATTTATACTGGTTCGGGCCA 59.225 45.455 4.39 0.00 36.97 5.36
2144 2224 2.406596 TTTATACTGGTTCGGGCCAC 57.593 50.000 4.39 0.00 34.36 5.01
2145 2225 0.542805 TTATACTGGTTCGGGCCACC 59.457 55.000 4.39 4.00 34.36 4.61
2172 2252 4.667519 GGTGTAATACCCTACTCCAGTG 57.332 50.000 0.00 0.00 44.15 3.66
2173 2253 4.028825 GGTGTAATACCCTACTCCAGTGT 58.971 47.826 0.00 0.00 44.15 3.55
2174 2254 4.142004 GGTGTAATACCCTACTCCAGTGTG 60.142 50.000 0.00 0.00 44.15 3.82
2175 2255 4.028131 TGTAATACCCTACTCCAGTGTGG 58.972 47.826 0.00 0.00 39.43 4.17
2176 2256 2.942604 ATACCCTACTCCAGTGTGGT 57.057 50.000 7.06 7.06 39.03 4.16
2177 2257 1.933021 TACCCTACTCCAGTGTGGTG 58.067 55.000 10.66 0.00 39.03 4.17
2178 2258 0.836400 ACCCTACTCCAGTGTGGTGG 60.836 60.000 2.18 0.00 39.03 4.61
2179 2259 0.836400 CCCTACTCCAGTGTGGTGGT 60.836 60.000 0.47 1.04 39.03 4.16
2180 2260 0.321671 CCTACTCCAGTGTGGTGGTG 59.678 60.000 0.47 0.00 39.03 4.17
2181 2261 0.321671 CTACTCCAGTGTGGTGGTGG 59.678 60.000 0.47 0.00 39.03 4.61
2182 2262 0.399376 TACTCCAGTGTGGTGGTGGT 60.399 55.000 0.47 0.00 39.03 4.16
2183 2263 1.227943 CTCCAGTGTGGTGGTGGTG 60.228 63.158 0.00 0.00 39.03 4.17
2184 2264 2.203337 CCAGTGTGGTGGTGGTGG 60.203 66.667 0.00 0.00 31.35 4.61
2185 2265 2.751731 CCAGTGTGGTGGTGGTGGA 61.752 63.158 0.00 0.00 31.35 4.02
2186 2266 1.455849 CAGTGTGGTGGTGGTGGAT 59.544 57.895 0.00 0.00 0.00 3.41
2187 2267 0.178992 CAGTGTGGTGGTGGTGGATT 60.179 55.000 0.00 0.00 0.00 3.01
2188 2268 0.178992 AGTGTGGTGGTGGTGGATTG 60.179 55.000 0.00 0.00 0.00 2.67
2189 2269 1.530419 TGTGGTGGTGGTGGATTGC 60.530 57.895 0.00 0.00 0.00 3.56
2190 2270 2.117206 TGGTGGTGGTGGATTGCC 59.883 61.111 0.00 0.00 0.00 4.52
2191 2271 2.440599 GGTGGTGGTGGATTGCCT 59.559 61.111 0.00 0.00 34.31 4.75
2192 2272 1.678970 GGTGGTGGTGGATTGCCTC 60.679 63.158 0.00 0.00 34.31 4.70
2193 2273 1.380302 GTGGTGGTGGATTGCCTCT 59.620 57.895 0.00 0.00 34.31 3.69
2194 2274 0.251341 GTGGTGGTGGATTGCCTCTT 60.251 55.000 0.00 0.00 34.31 2.85
2195 2275 0.251297 TGGTGGTGGATTGCCTCTTG 60.251 55.000 0.00 0.00 34.31 3.02
2196 2276 0.967380 GGTGGTGGATTGCCTCTTGG 60.967 60.000 0.00 0.00 34.31 3.61
2197 2277 0.967380 GTGGTGGATTGCCTCTTGGG 60.967 60.000 0.00 0.00 38.36 4.12
2206 2286 4.469883 CCTCTTGGGCGGATGATG 57.530 61.111 0.00 0.00 0.00 3.07
2207 2287 1.832219 CCTCTTGGGCGGATGATGA 59.168 57.895 0.00 0.00 0.00 2.92
2208 2288 0.181114 CCTCTTGGGCGGATGATGAA 59.819 55.000 0.00 0.00 0.00 2.57
2209 2289 1.303309 CTCTTGGGCGGATGATGAAC 58.697 55.000 0.00 0.00 0.00 3.18
2210 2290 0.617935 TCTTGGGCGGATGATGAACA 59.382 50.000 0.00 0.00 0.00 3.18
2211 2291 1.019673 CTTGGGCGGATGATGAACAG 58.980 55.000 0.00 0.00 0.00 3.16
2212 2292 0.327924 TTGGGCGGATGATGAACAGT 59.672 50.000 0.00 0.00 0.00 3.55
2213 2293 1.199615 TGGGCGGATGATGAACAGTA 58.800 50.000 0.00 0.00 0.00 2.74
2214 2294 1.134521 TGGGCGGATGATGAACAGTAC 60.135 52.381 0.00 0.00 0.00 2.73
2215 2295 1.134521 GGGCGGATGATGAACAGTACA 60.135 52.381 0.00 0.00 0.00 2.90
2216 2296 2.627945 GGCGGATGATGAACAGTACAA 58.372 47.619 0.00 0.00 0.00 2.41
2217 2297 2.609459 GGCGGATGATGAACAGTACAAG 59.391 50.000 0.00 0.00 0.00 3.16
2218 2298 2.609459 GCGGATGATGAACAGTACAAGG 59.391 50.000 0.00 0.00 0.00 3.61
2219 2299 3.678806 GCGGATGATGAACAGTACAAGGA 60.679 47.826 0.00 0.00 0.00 3.36
2220 2300 4.115516 CGGATGATGAACAGTACAAGGAG 58.884 47.826 0.00 0.00 0.00 3.69
2221 2301 4.142160 CGGATGATGAACAGTACAAGGAGA 60.142 45.833 0.00 0.00 0.00 3.71
2222 2302 5.624509 CGGATGATGAACAGTACAAGGAGAA 60.625 44.000 0.00 0.00 0.00 2.87
2223 2303 5.814705 GGATGATGAACAGTACAAGGAGAAG 59.185 44.000 0.00 0.00 0.00 2.85
2224 2304 6.351371 GGATGATGAACAGTACAAGGAGAAGA 60.351 42.308 0.00 0.00 0.00 2.87
2225 2305 6.419484 TGATGAACAGTACAAGGAGAAGAA 57.581 37.500 0.00 0.00 0.00 2.52
2226 2306 6.223852 TGATGAACAGTACAAGGAGAAGAAC 58.776 40.000 0.00 0.00 0.00 3.01
2227 2307 5.607939 TGAACAGTACAAGGAGAAGAACA 57.392 39.130 0.00 0.00 0.00 3.18
2228 2308 5.984725 TGAACAGTACAAGGAGAAGAACAA 58.015 37.500 0.00 0.00 0.00 2.83
2229 2309 5.815740 TGAACAGTACAAGGAGAAGAACAAC 59.184 40.000 0.00 0.00 0.00 3.32
2230 2310 4.704965 ACAGTACAAGGAGAAGAACAACC 58.295 43.478 0.00 0.00 0.00 3.77
2231 2311 4.409247 ACAGTACAAGGAGAAGAACAACCT 59.591 41.667 0.00 0.00 0.00 3.50
2232 2312 4.991687 CAGTACAAGGAGAAGAACAACCTC 59.008 45.833 0.00 0.00 31.89 3.85
2233 2313 3.493767 ACAAGGAGAAGAACAACCTCC 57.506 47.619 0.00 0.00 45.16 4.30
2237 2317 3.326836 GGAGAAGAACAACCTCCTGAG 57.673 52.381 0.00 0.00 42.36 3.35
2247 2327 2.765352 CCTCCTGAGGTTGAGGTGT 58.235 57.895 4.97 0.00 42.67 4.16
2248 2328 1.059913 CCTCCTGAGGTTGAGGTGTT 58.940 55.000 4.97 0.00 42.67 3.32
2249 2329 1.002544 CCTCCTGAGGTTGAGGTGTTC 59.997 57.143 4.97 0.00 42.67 3.18
2250 2330 1.974236 CTCCTGAGGTTGAGGTGTTCT 59.026 52.381 0.00 0.00 31.85 3.01
2251 2331 2.370189 CTCCTGAGGTTGAGGTGTTCTT 59.630 50.000 0.00 0.00 31.85 2.52
2252 2332 2.104792 TCCTGAGGTTGAGGTGTTCTTG 59.895 50.000 0.00 0.00 31.85 3.02
2253 2333 2.158755 CCTGAGGTTGAGGTGTTCTTGT 60.159 50.000 0.00 0.00 0.00 3.16
2254 2334 2.874701 CTGAGGTTGAGGTGTTCTTGTG 59.125 50.000 0.00 0.00 0.00 3.33
2255 2335 1.604278 GAGGTTGAGGTGTTCTTGTGC 59.396 52.381 0.00 0.00 0.00 4.57
2256 2336 1.212935 AGGTTGAGGTGTTCTTGTGCT 59.787 47.619 0.00 0.00 0.00 4.40
2257 2337 2.024414 GGTTGAGGTGTTCTTGTGCTT 58.976 47.619 0.00 0.00 0.00 3.91
2258 2338 2.223572 GGTTGAGGTGTTCTTGTGCTTG 60.224 50.000 0.00 0.00 0.00 4.01
2259 2339 1.679139 TGAGGTGTTCTTGTGCTTGG 58.321 50.000 0.00 0.00 0.00 3.61
2260 2340 0.312102 GAGGTGTTCTTGTGCTTGGC 59.688 55.000 0.00 0.00 0.00 4.52
2261 2341 1.008538 GGTGTTCTTGTGCTTGGCG 60.009 57.895 0.00 0.00 0.00 5.69
2262 2342 1.444119 GGTGTTCTTGTGCTTGGCGA 61.444 55.000 0.00 0.00 0.00 5.54
2263 2343 0.380378 GTGTTCTTGTGCTTGGCGAA 59.620 50.000 0.00 0.00 0.00 4.70
2264 2344 0.380378 TGTTCTTGTGCTTGGCGAAC 59.620 50.000 0.00 0.00 35.69 3.95
2265 2345 0.663153 GTTCTTGTGCTTGGCGAACT 59.337 50.000 0.00 0.00 33.18 3.01
2266 2346 1.065551 GTTCTTGTGCTTGGCGAACTT 59.934 47.619 0.00 0.00 33.18 2.66
2267 2347 0.662619 TCTTGTGCTTGGCGAACTTG 59.337 50.000 0.00 0.00 0.00 3.16
2268 2348 0.381801 CTTGTGCTTGGCGAACTTGT 59.618 50.000 0.00 0.00 0.00 3.16
2269 2349 0.100325 TTGTGCTTGGCGAACTTGTG 59.900 50.000 0.00 0.00 0.00 3.33
2270 2350 1.029408 TGTGCTTGGCGAACTTGTGT 61.029 50.000 0.00 0.00 0.00 3.72
2271 2351 0.592247 GTGCTTGGCGAACTTGTGTG 60.592 55.000 0.00 0.00 0.00 3.82
2272 2352 1.008538 GCTTGGCGAACTTGTGTGG 60.009 57.895 0.00 0.00 0.00 4.17
2273 2353 1.654220 CTTGGCGAACTTGTGTGGG 59.346 57.895 0.00 0.00 0.00 4.61
2274 2354 1.077357 TTGGCGAACTTGTGTGGGT 60.077 52.632 0.00 0.00 0.00 4.51
2275 2355 1.380403 TTGGCGAACTTGTGTGGGTG 61.380 55.000 0.00 0.00 0.00 4.61
2276 2356 1.525077 GGCGAACTTGTGTGGGTGA 60.525 57.895 0.00 0.00 0.00 4.02
2277 2357 1.507141 GGCGAACTTGTGTGGGTGAG 61.507 60.000 0.00 0.00 0.00 3.51
2278 2358 0.531974 GCGAACTTGTGTGGGTGAGA 60.532 55.000 0.00 0.00 0.00 3.27
2279 2359 1.878102 GCGAACTTGTGTGGGTGAGAT 60.878 52.381 0.00 0.00 0.00 2.75
2280 2360 1.800586 CGAACTTGTGTGGGTGAGATG 59.199 52.381 0.00 0.00 0.00 2.90
2281 2361 1.537202 GAACTTGTGTGGGTGAGATGC 59.463 52.381 0.00 0.00 0.00 3.91
2282 2362 0.250901 ACTTGTGTGGGTGAGATGCC 60.251 55.000 0.00 0.00 0.00 4.40
2283 2363 0.037303 CTTGTGTGGGTGAGATGCCT 59.963 55.000 0.00 0.00 0.00 4.75
2284 2364 0.036732 TTGTGTGGGTGAGATGCCTC 59.963 55.000 0.00 0.00 39.86 4.70
2285 2365 0.837691 TGTGTGGGTGAGATGCCTCT 60.838 55.000 0.00 0.00 40.10 3.69
2286 2366 0.392193 GTGTGGGTGAGATGCCTCTG 60.392 60.000 0.00 0.00 40.10 3.35
2287 2367 0.545071 TGTGGGTGAGATGCCTCTGA 60.545 55.000 0.00 0.00 40.10 3.27
2288 2368 0.615331 GTGGGTGAGATGCCTCTGAA 59.385 55.000 0.00 0.00 40.10 3.02
2289 2369 1.211457 GTGGGTGAGATGCCTCTGAAT 59.789 52.381 0.00 0.00 40.10 2.57
2290 2370 1.211212 TGGGTGAGATGCCTCTGAATG 59.789 52.381 0.00 0.00 40.10 2.67
2291 2371 1.487976 GGGTGAGATGCCTCTGAATGA 59.512 52.381 0.00 0.00 40.10 2.57
2292 2372 2.485124 GGGTGAGATGCCTCTGAATGAG 60.485 54.545 0.00 0.00 40.10 2.90
2293 2373 2.170187 GGTGAGATGCCTCTGAATGAGT 59.830 50.000 0.00 0.00 41.11 3.41
2294 2374 3.370315 GGTGAGATGCCTCTGAATGAGTT 60.370 47.826 0.00 0.00 41.11 3.01
2295 2375 3.870419 GTGAGATGCCTCTGAATGAGTTC 59.130 47.826 0.00 0.00 41.11 3.01
2296 2376 3.516700 TGAGATGCCTCTGAATGAGTTCA 59.483 43.478 0.00 0.00 41.11 3.18
2297 2377 3.870419 GAGATGCCTCTGAATGAGTTCAC 59.130 47.826 0.00 0.00 39.36 3.18
2298 2378 3.518705 AGATGCCTCTGAATGAGTTCACT 59.481 43.478 0.00 0.00 39.36 3.41
2299 2379 3.325293 TGCCTCTGAATGAGTTCACTC 57.675 47.619 0.00 0.00 39.36 3.51
2300 2380 2.902486 TGCCTCTGAATGAGTTCACTCT 59.098 45.455 8.41 0.00 43.25 3.24
2301 2381 3.056250 TGCCTCTGAATGAGTTCACTCTC 60.056 47.826 8.41 0.00 43.25 3.20
2302 2382 3.195396 GCCTCTGAATGAGTTCACTCTCT 59.805 47.826 8.41 0.00 43.25 3.10
2303 2383 4.677779 GCCTCTGAATGAGTTCACTCTCTC 60.678 50.000 8.41 5.48 43.25 3.20
2304 2384 4.706476 CCTCTGAATGAGTTCACTCTCTCT 59.294 45.833 8.41 0.00 43.25 3.10
2305 2385 5.163622 CCTCTGAATGAGTTCACTCTCTCTC 60.164 48.000 8.41 1.21 43.25 3.20
2306 2386 5.569355 TCTGAATGAGTTCACTCTCTCTCT 58.431 41.667 8.41 0.00 43.25 3.10
2307 2387 5.647658 TCTGAATGAGTTCACTCTCTCTCTC 59.352 44.000 8.41 0.00 43.25 3.20
2308 2388 5.569355 TGAATGAGTTCACTCTCTCTCTCT 58.431 41.667 8.41 0.00 43.25 3.10
2309 2389 5.647658 TGAATGAGTTCACTCTCTCTCTCTC 59.352 44.000 8.41 0.00 43.25 3.20
2310 2390 4.908601 TGAGTTCACTCTCTCTCTCTCT 57.091 45.455 8.41 0.00 43.25 3.10
2311 2391 4.832248 TGAGTTCACTCTCTCTCTCTCTC 58.168 47.826 8.41 0.00 43.25 3.20
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
74 75 8.999220 ACTCTACAAACAAAGTTATAGCCTAC 57.001 34.615 0.00 0.00 0.00 3.18
84 85 6.781507 AGGGAGTAGTACTCTACAAACAAAGT 59.218 38.462 25.70 3.12 46.30 2.66
107 108 5.186198 CAAAGATACTAAACCCCACTGAGG 58.814 45.833 0.00 0.00 37.03 3.86
108 109 5.805728 ACAAAGATACTAAACCCCACTGAG 58.194 41.667 0.00 0.00 0.00 3.35
109 110 5.836024 ACAAAGATACTAAACCCCACTGA 57.164 39.130 0.00 0.00 0.00 3.41
110 111 5.878669 GGTACAAAGATACTAAACCCCACTG 59.121 44.000 0.00 0.00 0.00 3.66
111 112 5.789054 AGGTACAAAGATACTAAACCCCACT 59.211 40.000 0.00 0.00 0.00 4.00
112 113 5.878669 CAGGTACAAAGATACTAAACCCCAC 59.121 44.000 0.00 0.00 0.00 4.61
113 114 5.548836 ACAGGTACAAAGATACTAAACCCCA 59.451 40.000 0.00 0.00 0.00 4.96
114 115 6.058553 ACAGGTACAAAGATACTAAACCCC 57.941 41.667 0.00 0.00 0.00 4.95
115 116 6.938596 ACAACAGGTACAAAGATACTAAACCC 59.061 38.462 0.00 0.00 0.00 4.11
116 117 7.974482 ACAACAGGTACAAAGATACTAAACC 57.026 36.000 0.00 0.00 0.00 3.27
120 121 9.701098 CAACTTACAACAGGTACAAAGATACTA 57.299 33.333 0.00 0.00 0.00 1.82
121 122 7.660208 CCAACTTACAACAGGTACAAAGATACT 59.340 37.037 0.00 0.00 0.00 2.12
122 123 7.658575 TCCAACTTACAACAGGTACAAAGATAC 59.341 37.037 0.00 0.00 0.00 2.24
145 146 1.734655 AACTTCCAGGCTCTTCTCCA 58.265 50.000 0.00 0.00 0.00 3.86
171 172 9.289303 GAAAAACATGAAAACGTAGCATATCAT 57.711 29.630 0.00 0.00 0.00 2.45
199 201 1.754226 TGAAAACCCCACTGCAGTTTC 59.246 47.619 18.94 17.33 32.73 2.78
204 206 1.859302 AAACTGAAAACCCCACTGCA 58.141 45.000 0.00 0.00 0.00 4.41
213 216 2.102420 CAGGACCCCCAAAACTGAAAAC 59.898 50.000 0.00 0.00 33.88 2.43
263 266 0.613260 ATATACATCCGCGCCACCAT 59.387 50.000 0.00 0.00 0.00 3.55
265 268 2.094390 TCTTATATACATCCGCGCCACC 60.094 50.000 0.00 0.00 0.00 4.61
299 303 2.606108 GAACCCACCAATTTCATTCGC 58.394 47.619 0.00 0.00 0.00 4.70
334 338 1.402456 CGTGTCGAAGATTCTTCGGGT 60.402 52.381 35.63 1.85 40.67 5.28
335 339 1.135489 TCGTGTCGAAGATTCTTCGGG 60.135 52.381 35.63 25.32 40.67 5.14
336 340 2.257974 TCGTGTCGAAGATTCTTCGG 57.742 50.000 35.63 24.50 40.67 4.30
337 341 5.205565 TCATATCGTGTCGAAGATTCTTCG 58.794 41.667 32.89 32.89 39.99 3.79
426 432 1.070577 CAGCTGAGTGTTGCGTTACAC 60.071 52.381 8.42 12.42 46.86 2.90
429 435 2.234613 GCAGCTGAGTGTTGCGTTA 58.765 52.632 20.43 0.00 42.63 3.18
583 608 9.726438 GGTTGGAATAATATTGCTACTGTAGAT 57.274 33.333 18.64 6.63 0.00 1.98
586 611 7.728148 TCGGTTGGAATAATATTGCTACTGTA 58.272 34.615 20.23 9.95 0.00 2.74
587 612 6.588204 TCGGTTGGAATAATATTGCTACTGT 58.412 36.000 20.23 0.00 0.00 3.55
588 613 7.672983 ATCGGTTGGAATAATATTGCTACTG 57.327 36.000 16.96 16.96 0.00 2.74
589 614 8.691661 AAATCGGTTGGAATAATATTGCTACT 57.308 30.769 15.49 0.00 0.00 2.57
590 615 7.744715 CGAAATCGGTTGGAATAATATTGCTAC 59.255 37.037 9.70 9.70 35.37 3.58
620 645 2.924290 GGAGCGAAGAATATATGGACGC 59.076 50.000 14.46 14.46 43.84 5.19
638 665 4.927978 ACCATCTCGAGAATTAGTGGAG 57.072 45.455 29.83 11.66 0.00 3.86
665 692 3.443099 TGATGGACGCAGACAGATAAG 57.557 47.619 0.00 0.00 0.00 1.73
666 693 3.638627 AGATGATGGACGCAGACAGATAA 59.361 43.478 0.00 0.00 0.00 1.75
667 694 3.225940 AGATGATGGACGCAGACAGATA 58.774 45.455 0.00 0.00 0.00 1.98
668 695 2.037901 AGATGATGGACGCAGACAGAT 58.962 47.619 0.00 0.00 0.00 2.90
669 696 1.478631 AGATGATGGACGCAGACAGA 58.521 50.000 0.00 0.00 0.00 3.41
670 697 2.360483 AGTAGATGATGGACGCAGACAG 59.640 50.000 0.00 0.00 0.00 3.51
671 698 2.379005 AGTAGATGATGGACGCAGACA 58.621 47.619 0.00 0.00 0.00 3.41
682 709 7.086376 GTGATTTTGTTGTGCAAGTAGATGAT 58.914 34.615 0.00 0.00 38.47 2.45
684 711 5.630680 GGTGATTTTGTTGTGCAAGTAGATG 59.369 40.000 0.00 0.00 38.47 2.90
687 714 3.974401 CGGTGATTTTGTTGTGCAAGTAG 59.026 43.478 0.00 0.00 38.47 2.57
714 741 6.318144 ACAGATAAGTTAGCAACGACTAGCTA 59.682 38.462 0.28 0.00 42.05 3.32
716 743 5.341617 ACAGATAAGTTAGCAACGACTAGC 58.658 41.667 0.28 0.00 36.23 3.42
717 744 6.552629 TGACAGATAAGTTAGCAACGACTAG 58.447 40.000 0.28 0.00 36.23 2.57
718 745 6.505044 TGACAGATAAGTTAGCAACGACTA 57.495 37.500 0.28 0.00 36.23 2.59
720 747 5.404366 TGTTGACAGATAAGTTAGCAACGAC 59.596 40.000 0.28 2.66 37.53 4.34
722 749 5.839262 TGTTGACAGATAAGTTAGCAACG 57.161 39.130 0.28 0.00 37.53 4.10
724 751 7.102993 TGCTATGTTGACAGATAAGTTAGCAA 58.897 34.615 9.61 0.00 37.26 3.91
725 752 6.639563 TGCTATGTTGACAGATAAGTTAGCA 58.360 36.000 0.28 8.48 37.71 3.49
726 753 7.721286 ATGCTATGTTGACAGATAAGTTAGC 57.279 36.000 0.00 0.00 0.00 3.09
727 754 9.926751 CAAATGCTATGTTGACAGATAAGTTAG 57.073 33.333 0.00 0.00 0.00 2.34
729 756 7.148018 CCCAAATGCTATGTTGACAGATAAGTT 60.148 37.037 0.00 0.00 0.00 2.66
730 757 6.319658 CCCAAATGCTATGTTGACAGATAAGT 59.680 38.462 0.00 0.00 0.00 2.24
732 759 5.067674 GCCCAAATGCTATGTTGACAGATAA 59.932 40.000 0.00 0.00 0.00 1.75
733 760 4.580167 GCCCAAATGCTATGTTGACAGATA 59.420 41.667 0.00 0.00 0.00 1.98
734 761 3.382546 GCCCAAATGCTATGTTGACAGAT 59.617 43.478 0.00 0.00 0.00 2.90
736 763 2.478370 CGCCCAAATGCTATGTTGACAG 60.478 50.000 0.00 0.00 0.00 3.51
740 767 3.128589 ACTTACGCCCAAATGCTATGTTG 59.871 43.478 0.00 0.00 0.00 3.33
743 770 4.370364 AAACTTACGCCCAAATGCTATG 57.630 40.909 0.00 0.00 0.00 2.23
744 771 5.592688 ACATAAACTTACGCCCAAATGCTAT 59.407 36.000 0.00 0.00 0.00 2.97
745 772 4.944930 ACATAAACTTACGCCCAAATGCTA 59.055 37.500 0.00 0.00 0.00 3.49
746 773 3.761752 ACATAAACTTACGCCCAAATGCT 59.238 39.130 0.00 0.00 0.00 3.79
747 774 4.104696 ACATAAACTTACGCCCAAATGC 57.895 40.909 0.00 0.00 0.00 3.56
748 775 6.255215 CAGTACATAAACTTACGCCCAAATG 58.745 40.000 0.00 0.00 0.00 2.32
749 776 5.163693 GCAGTACATAAACTTACGCCCAAAT 60.164 40.000 0.00 0.00 0.00 2.32
750 777 4.154556 GCAGTACATAAACTTACGCCCAAA 59.845 41.667 0.00 0.00 0.00 3.28
751 778 3.685756 GCAGTACATAAACTTACGCCCAA 59.314 43.478 0.00 0.00 0.00 4.12
752 779 3.055675 AGCAGTACATAAACTTACGCCCA 60.056 43.478 0.00 0.00 0.00 5.36
753 780 3.308866 CAGCAGTACATAAACTTACGCCC 59.691 47.826 0.00 0.00 0.00 6.13
754 781 3.930848 ACAGCAGTACATAAACTTACGCC 59.069 43.478 0.00 0.00 0.00 5.68
755 782 6.636666 TTACAGCAGTACATAAACTTACGC 57.363 37.500 0.00 0.00 0.00 4.42
756 783 8.236084 AGTTTACAGCAGTACATAAACTTACG 57.764 34.615 2.93 0.00 42.43 3.18
757 784 9.420551 AGAGTTTACAGCAGTACATAAACTTAC 57.579 33.333 8.66 0.04 44.13 2.34
758 785 9.635520 GAGAGTTTACAGCAGTACATAAACTTA 57.364 33.333 8.66 0.00 44.13 2.24
759 786 7.603024 GGAGAGTTTACAGCAGTACATAAACTT 59.397 37.037 8.66 1.70 44.13 2.66
760 787 7.097834 GGAGAGTTTACAGCAGTACATAAACT 58.902 38.462 7.38 7.38 45.81 2.66
761 788 6.034683 CGGAGAGTTTACAGCAGTACATAAAC 59.965 42.308 0.00 2.70 37.65 2.01
762 789 6.097356 CGGAGAGTTTACAGCAGTACATAAA 58.903 40.000 0.00 0.00 0.00 1.40
763 790 5.184479 ACGGAGAGTTTACAGCAGTACATAA 59.816 40.000 0.00 0.00 0.00 1.90
764 791 4.703575 ACGGAGAGTTTACAGCAGTACATA 59.296 41.667 0.00 0.00 0.00 2.29
765 792 3.510360 ACGGAGAGTTTACAGCAGTACAT 59.490 43.478 0.00 0.00 0.00 2.29
766 793 2.889045 ACGGAGAGTTTACAGCAGTACA 59.111 45.455 0.00 0.00 0.00 2.90
767 794 3.243336 CACGGAGAGTTTACAGCAGTAC 58.757 50.000 0.00 0.00 0.00 2.73
768 795 2.889045 ACACGGAGAGTTTACAGCAGTA 59.111 45.455 0.00 0.00 0.00 2.74
769 796 1.687123 ACACGGAGAGTTTACAGCAGT 59.313 47.619 0.00 0.00 0.00 4.40
770 797 2.440539 ACACGGAGAGTTTACAGCAG 57.559 50.000 0.00 0.00 0.00 4.24
771 798 2.902705 AACACGGAGAGTTTACAGCA 57.097 45.000 0.00 0.00 38.34 4.41
803 830 0.254747 TGCCACCCCCTCTAAATTCG 59.745 55.000 0.00 0.00 0.00 3.34
872 899 3.498397 CGGATCCGTGGGAAGAAATAATG 59.502 47.826 26.35 0.00 34.34 1.90
902 936 1.836383 CGCTTATATATCCGCGGACC 58.164 55.000 33.75 10.11 41.72 4.46
904 938 0.101759 GGCGCTTATATATCCGCGGA 59.898 55.000 33.12 33.12 46.67 5.54
975 1009 2.599659 GCCAAACTGCTATTGTGCTTC 58.400 47.619 0.00 0.00 0.00 3.86
983 1017 0.378257 CATTCGCGCCAAACTGCTAT 59.622 50.000 0.00 0.00 0.00 2.97
985 1019 2.187599 GACATTCGCGCCAAACTGCT 62.188 55.000 0.00 0.00 0.00 4.24
987 1021 1.509787 CGACATTCGCGCCAAACTG 60.510 57.895 0.00 0.00 31.14 3.16
1083 1117 0.462759 GCCGGATCCACTCCTTGAAG 60.463 60.000 13.41 0.00 42.47 3.02
1327 1361 3.462678 GGACCGGACTGGAGGAGC 61.463 72.222 9.46 0.00 42.00 4.70
1330 1364 1.000019 TACTGGACCGGACTGGAGG 60.000 63.158 9.46 0.00 42.00 4.30
1410 1454 2.370281 TCACTTTCCGCATCTGAGAC 57.630 50.000 0.00 0.00 0.00 3.36
1437 1481 7.764443 TCGAGAGAAAAAGAAAAGAAGACAGAA 59.236 33.333 0.00 0.00 37.03 3.02
1452 1507 1.151668 GCTGCAGCTCGAGAGAAAAA 58.848 50.000 31.33 0.00 41.32 1.94
1480 1535 3.570125 GGCCTGCACCTTCTATTATTTCC 59.430 47.826 0.00 0.00 0.00 3.13
1522 1577 2.988570 AGCGAGTACTACAGCACTACT 58.011 47.619 16.50 0.00 0.00 2.57
1550 1609 5.090757 CACATATTATTCCATGCATGCGAC 58.909 41.667 21.69 0.00 0.00 5.19
1632 1710 9.396022 CTACTCCTTTTTCTGCTATAATTTGGA 57.604 33.333 0.00 0.00 0.00 3.53
1634 1712 8.624776 CCCTACTCCTTTTTCTGCTATAATTTG 58.375 37.037 0.00 0.00 0.00 2.32
1636 1714 6.773200 GCCCTACTCCTTTTTCTGCTATAATT 59.227 38.462 0.00 0.00 0.00 1.40
1637 1715 6.299922 GCCCTACTCCTTTTTCTGCTATAAT 58.700 40.000 0.00 0.00 0.00 1.28
1638 1716 5.681639 GCCCTACTCCTTTTTCTGCTATAA 58.318 41.667 0.00 0.00 0.00 0.98
1639 1717 4.202223 CGCCCTACTCCTTTTTCTGCTATA 60.202 45.833 0.00 0.00 0.00 1.31
1641 1719 2.093658 CGCCCTACTCCTTTTTCTGCTA 60.094 50.000 0.00 0.00 0.00 3.49
1643 1721 1.087501 CGCCCTACTCCTTTTTCTGC 58.912 55.000 0.00 0.00 0.00 4.26
1644 1722 2.474410 ACGCCCTACTCCTTTTTCTG 57.526 50.000 0.00 0.00 0.00 3.02
1645 1723 3.503800 AAACGCCCTACTCCTTTTTCT 57.496 42.857 0.00 0.00 0.00 2.52
1646 1724 3.305131 CCAAAACGCCCTACTCCTTTTTC 60.305 47.826 0.00 0.00 0.00 2.29
1788 1866 6.974048 TCGCAATTCAAGGTATTTGATCATTG 59.026 34.615 0.00 0.00 44.90 2.82
1789 1867 7.099266 TCGCAATTCAAGGTATTTGATCATT 57.901 32.000 0.00 0.00 44.90 2.57
1824 1904 7.856145 ATACTGTTCATTCTCAAACTCCATC 57.144 36.000 0.00 0.00 0.00 3.51
1842 1922 4.273480 GTGGCTTTTCATCGCATATACTGT 59.727 41.667 0.00 0.00 0.00 3.55
1847 1927 6.579666 AATATGTGGCTTTTCATCGCATAT 57.420 33.333 0.00 0.00 42.69 1.78
1848 1928 6.183360 ACAAATATGTGGCTTTTCATCGCATA 60.183 34.615 0.00 0.00 38.69 3.14
1882 1962 9.973450 GATGAGATACAGTAAAAATGAGAGCTA 57.027 33.333 0.00 0.00 0.00 3.32
1883 1963 8.703743 AGATGAGATACAGTAAAAATGAGAGCT 58.296 33.333 0.00 0.00 0.00 4.09
1884 1964 8.885494 AGATGAGATACAGTAAAAATGAGAGC 57.115 34.615 0.00 0.00 0.00 4.09
1898 1978 9.832445 GGGTGTAGATTTTTAAGATGAGATACA 57.168 33.333 0.00 0.00 0.00 2.29
1899 1979 9.832445 TGGGTGTAGATTTTTAAGATGAGATAC 57.168 33.333 0.00 0.00 0.00 2.24
1901 1981 9.347240 CATGGGTGTAGATTTTTAAGATGAGAT 57.653 33.333 0.00 0.00 0.00 2.75
1902 1982 8.328758 ACATGGGTGTAGATTTTTAAGATGAGA 58.671 33.333 0.00 0.00 36.63 3.27
1903 1983 8.511604 ACATGGGTGTAGATTTTTAAGATGAG 57.488 34.615 0.00 0.00 36.63 2.90
1904 1984 9.391006 GTACATGGGTGTAGATTTTTAAGATGA 57.609 33.333 0.00 0.00 41.29 2.92
1905 1985 9.396022 AGTACATGGGTGTAGATTTTTAAGATG 57.604 33.333 0.00 0.00 41.29 2.90
1906 1986 9.975218 AAGTACATGGGTGTAGATTTTTAAGAT 57.025 29.630 0.00 0.00 41.29 2.40
1907 1987 9.226606 CAAGTACATGGGTGTAGATTTTTAAGA 57.773 33.333 0.00 0.00 41.29 2.10
1908 1988 7.968405 GCAAGTACATGGGTGTAGATTTTTAAG 59.032 37.037 0.00 0.00 41.29 1.85
1909 1989 7.361371 CGCAAGTACATGGGTGTAGATTTTTAA 60.361 37.037 6.97 0.00 41.29 1.52
1910 1990 6.092944 CGCAAGTACATGGGTGTAGATTTTTA 59.907 38.462 6.97 0.00 41.29 1.52
1911 1991 5.106317 CGCAAGTACATGGGTGTAGATTTTT 60.106 40.000 6.97 0.00 41.29 1.94
1912 1992 4.394920 CGCAAGTACATGGGTGTAGATTTT 59.605 41.667 6.97 0.00 41.29 1.82
1913 1993 3.938963 CGCAAGTACATGGGTGTAGATTT 59.061 43.478 6.97 0.00 41.29 2.17
1914 1994 3.531538 CGCAAGTACATGGGTGTAGATT 58.468 45.455 6.97 0.00 41.29 2.40
1915 1995 2.741878 GCGCAAGTACATGGGTGTAGAT 60.742 50.000 15.36 0.00 41.29 1.98
1916 1996 1.404986 GCGCAAGTACATGGGTGTAGA 60.405 52.381 15.36 0.00 41.29 2.59
1917 1997 1.006832 GCGCAAGTACATGGGTGTAG 58.993 55.000 15.36 0.00 41.29 2.74
1918 1998 0.611200 AGCGCAAGTACATGGGTGTA 59.389 50.000 11.47 0.00 36.73 2.90
1919 1999 0.250727 AAGCGCAAGTACATGGGTGT 60.251 50.000 11.47 2.40 39.27 4.16
1920 2000 0.881118 AAAGCGCAAGTACATGGGTG 59.119 50.000 11.47 0.55 41.68 4.61
1921 2001 1.616159 AAAAGCGCAAGTACATGGGT 58.384 45.000 11.47 1.99 41.68 4.51
1922 2002 2.327568 CAAAAAGCGCAAGTACATGGG 58.672 47.619 11.47 10.48 41.68 4.00
1923 2003 2.030363 TCCAAAAAGCGCAAGTACATGG 60.030 45.455 11.47 8.67 41.68 3.66
1924 2004 3.281341 TCCAAAAAGCGCAAGTACATG 57.719 42.857 11.47 0.00 41.68 3.21
1925 2005 3.255642 ACATCCAAAAAGCGCAAGTACAT 59.744 39.130 11.47 0.00 41.68 2.29
1926 2006 2.621055 ACATCCAAAAAGCGCAAGTACA 59.379 40.909 11.47 0.00 41.68 2.90
1927 2007 3.282831 ACATCCAAAAAGCGCAAGTAC 57.717 42.857 11.47 0.00 41.68 2.73
1928 2008 4.457603 ACATACATCCAAAAAGCGCAAGTA 59.542 37.500 11.47 0.00 41.68 2.24
1929 2009 3.255642 ACATACATCCAAAAAGCGCAAGT 59.744 39.130 11.47 0.00 41.68 3.16
1930 2010 3.609373 CACATACATCCAAAAAGCGCAAG 59.391 43.478 11.47 0.00 43.44 4.01
1931 2011 3.005261 ACACATACATCCAAAAAGCGCAA 59.995 39.130 11.47 0.00 0.00 4.85
1932 2012 2.556189 ACACATACATCCAAAAAGCGCA 59.444 40.909 11.47 0.00 0.00 6.09
1933 2013 3.216147 ACACATACATCCAAAAAGCGC 57.784 42.857 0.00 0.00 0.00 5.92
1934 2014 7.810766 AAAATACACATACATCCAAAAAGCG 57.189 32.000 0.00 0.00 0.00 4.68
1970 2050 9.037737 CCGTAATCCGACATTATCTTTTAGAAA 57.962 33.333 0.00 0.00 39.56 2.52
1971 2051 7.654520 CCCGTAATCCGACATTATCTTTTAGAA 59.345 37.037 0.00 0.00 39.56 2.10
1972 2052 7.149973 CCCGTAATCCGACATTATCTTTTAGA 58.850 38.462 0.00 0.00 39.56 2.10
1973 2053 6.927381 ACCCGTAATCCGACATTATCTTTTAG 59.073 38.462 0.00 0.00 39.56 1.85
1974 2054 6.819284 ACCCGTAATCCGACATTATCTTTTA 58.181 36.000 0.00 0.00 39.56 1.52
1975 2055 5.677567 ACCCGTAATCCGACATTATCTTTT 58.322 37.500 0.00 0.00 39.56 2.27
1976 2056 5.286267 ACCCGTAATCCGACATTATCTTT 57.714 39.130 0.00 0.00 39.56 2.52
1977 2057 4.950205 ACCCGTAATCCGACATTATCTT 57.050 40.909 0.00 0.00 39.56 2.40
1978 2058 4.262335 GGAACCCGTAATCCGACATTATCT 60.262 45.833 0.00 0.00 39.56 1.98
1979 2059 3.992427 GGAACCCGTAATCCGACATTATC 59.008 47.826 0.00 0.00 39.56 1.75
1980 2060 3.999046 GGAACCCGTAATCCGACATTAT 58.001 45.455 0.00 0.00 39.56 1.28
1981 2061 3.457610 GGAACCCGTAATCCGACATTA 57.542 47.619 0.00 0.00 39.56 1.90
1982 2062 2.320745 GGAACCCGTAATCCGACATT 57.679 50.000 0.00 0.00 39.56 2.71
1988 2068 0.677414 TTTGCCGGAACCCGTAATCC 60.677 55.000 5.05 0.00 46.80 3.01
1989 2069 1.135603 GTTTTGCCGGAACCCGTAATC 60.136 52.381 5.05 0.00 46.80 1.75
1990 2070 0.883153 GTTTTGCCGGAACCCGTAAT 59.117 50.000 5.05 0.00 46.80 1.89
1991 2071 1.171549 GGTTTTGCCGGAACCCGTAA 61.172 55.000 5.05 0.00 46.80 3.18
1992 2072 1.600356 GGTTTTGCCGGAACCCGTA 60.600 57.895 5.05 0.00 46.80 4.02
1993 2073 2.908428 GGTTTTGCCGGAACCCGT 60.908 61.111 5.05 0.00 46.80 5.28
1996 2076 1.110518 TTGAGGGTTTTGCCGGAACC 61.111 55.000 13.86 13.86 44.62 3.62
1997 2077 0.313987 CTTGAGGGTTTTGCCGGAAC 59.686 55.000 5.05 0.00 38.44 3.62
1998 2078 0.183971 TCTTGAGGGTTTTGCCGGAA 59.816 50.000 5.05 0.00 38.44 4.30
1999 2079 0.404040 ATCTTGAGGGTTTTGCCGGA 59.596 50.000 5.05 0.00 38.44 5.14
2000 2080 1.202348 GAATCTTGAGGGTTTTGCCGG 59.798 52.381 0.00 0.00 38.44 6.13
2001 2081 1.885887 TGAATCTTGAGGGTTTTGCCG 59.114 47.619 0.00 0.00 38.44 5.69
2002 2082 4.058124 GTTTGAATCTTGAGGGTTTTGCC 58.942 43.478 0.00 0.00 0.00 4.52
2003 2083 4.507756 GTGTTTGAATCTTGAGGGTTTTGC 59.492 41.667 0.00 0.00 0.00 3.68
2004 2084 5.750067 CAGTGTTTGAATCTTGAGGGTTTTG 59.250 40.000 0.00 0.00 0.00 2.44
2005 2085 5.163416 CCAGTGTTTGAATCTTGAGGGTTTT 60.163 40.000 0.00 0.00 0.00 2.43
2006 2086 4.342092 CCAGTGTTTGAATCTTGAGGGTTT 59.658 41.667 0.00 0.00 0.00 3.27
2007 2087 3.891366 CCAGTGTTTGAATCTTGAGGGTT 59.109 43.478 0.00 0.00 0.00 4.11
2008 2088 3.490348 CCAGTGTTTGAATCTTGAGGGT 58.510 45.455 0.00 0.00 0.00 4.34
2009 2089 2.821969 CCCAGTGTTTGAATCTTGAGGG 59.178 50.000 0.00 0.00 0.00 4.30
2010 2090 2.821969 CCCCAGTGTTTGAATCTTGAGG 59.178 50.000 0.00 0.00 0.00 3.86
2011 2091 3.254166 CACCCCAGTGTTTGAATCTTGAG 59.746 47.826 0.00 0.00 39.30 3.02
2012 2092 3.221771 CACCCCAGTGTTTGAATCTTGA 58.778 45.455 0.00 0.00 39.30 3.02
2013 2093 2.288395 GCACCCCAGTGTTTGAATCTTG 60.288 50.000 0.00 0.00 46.35 3.02
2014 2094 1.963515 GCACCCCAGTGTTTGAATCTT 59.036 47.619 0.00 0.00 46.35 2.40
2015 2095 1.620822 GCACCCCAGTGTTTGAATCT 58.379 50.000 0.00 0.00 46.35 2.40
2016 2096 0.240945 CGCACCCCAGTGTTTGAATC 59.759 55.000 0.00 0.00 46.35 2.52
2017 2097 1.805428 GCGCACCCCAGTGTTTGAAT 61.805 55.000 0.30 0.00 46.35 2.57
2018 2098 2.485795 GCGCACCCCAGTGTTTGAA 61.486 57.895 0.30 0.00 46.35 2.69
2019 2099 2.904866 GCGCACCCCAGTGTTTGA 60.905 61.111 0.30 0.00 46.35 2.69
2020 2100 4.326766 CGCGCACCCCAGTGTTTG 62.327 66.667 8.75 0.00 46.35 2.93
2030 2110 4.736631 GAAACCTTCGCGCGCACC 62.737 66.667 32.61 1.16 0.00 5.01
2031 2111 4.736631 GGAAACCTTCGCGCGCAC 62.737 66.667 32.61 10.20 0.00 5.34
2032 2112 4.980805 AGGAAACCTTCGCGCGCA 62.981 61.111 32.61 15.11 0.00 6.09
2033 2113 4.148645 GAGGAAACCTTCGCGCGC 62.149 66.667 27.95 23.91 31.76 6.86
2034 2114 3.488090 GGAGGAAACCTTCGCGCG 61.488 66.667 26.76 26.76 31.76 6.86
2035 2115 2.234913 TAGGGAGGAAACCTTCGCGC 62.235 60.000 0.00 0.00 39.54 6.86
2036 2116 0.464452 ATAGGGAGGAAACCTTCGCG 59.536 55.000 0.00 0.00 39.54 5.87
2037 2117 1.538419 CGATAGGGAGGAAACCTTCGC 60.538 57.143 0.00 0.00 39.54 4.70
2038 2118 2.029623 TCGATAGGGAGGAAACCTTCG 58.970 52.381 0.00 0.00 39.54 3.79
2039 2119 3.007074 GGATCGATAGGGAGGAAACCTTC 59.993 52.174 0.00 0.00 39.54 3.46
2040 2120 2.973406 GGATCGATAGGGAGGAAACCTT 59.027 50.000 0.00 0.00 39.54 3.50
2041 2121 2.090719 TGGATCGATAGGGAGGAAACCT 60.091 50.000 0.00 0.00 42.15 3.50
2042 2122 2.037381 GTGGATCGATAGGGAGGAAACC 59.963 54.545 0.00 0.00 0.00 3.27
2043 2123 2.288273 CGTGGATCGATAGGGAGGAAAC 60.288 54.545 0.00 0.00 42.86 2.78
2044 2124 1.961394 CGTGGATCGATAGGGAGGAAA 59.039 52.381 0.00 0.00 42.86 3.13
2045 2125 1.617322 CGTGGATCGATAGGGAGGAA 58.383 55.000 0.00 0.00 42.86 3.36
2046 2126 0.894184 GCGTGGATCGATAGGGAGGA 60.894 60.000 0.00 0.00 42.86 3.71
2047 2127 1.587054 GCGTGGATCGATAGGGAGG 59.413 63.158 0.00 0.00 42.86 4.30
2048 2128 1.587054 GGCGTGGATCGATAGGGAG 59.413 63.158 0.00 0.00 42.86 4.30
2049 2129 1.906824 GGGCGTGGATCGATAGGGA 60.907 63.158 0.00 0.00 42.86 4.20
2050 2130 0.611062 TAGGGCGTGGATCGATAGGG 60.611 60.000 0.00 0.00 42.86 3.53
2051 2131 1.067776 GTTAGGGCGTGGATCGATAGG 60.068 57.143 0.00 0.00 42.86 2.57
2052 2132 1.887198 AGTTAGGGCGTGGATCGATAG 59.113 52.381 0.00 0.00 42.86 2.08
2053 2133 1.884579 GAGTTAGGGCGTGGATCGATA 59.115 52.381 0.00 0.00 42.86 2.92
2054 2134 0.674534 GAGTTAGGGCGTGGATCGAT 59.325 55.000 0.00 0.00 42.86 3.59
2055 2135 0.395311 AGAGTTAGGGCGTGGATCGA 60.395 55.000 0.00 0.00 42.86 3.59
2056 2136 0.030908 GAGAGTTAGGGCGTGGATCG 59.969 60.000 0.00 0.00 43.12 3.69
2057 2137 1.404843 AGAGAGTTAGGGCGTGGATC 58.595 55.000 0.00 0.00 0.00 3.36
2058 2138 2.750141 TAGAGAGTTAGGGCGTGGAT 57.250 50.000 0.00 0.00 0.00 3.41
2059 2139 2.376109 CTTAGAGAGTTAGGGCGTGGA 58.624 52.381 0.00 0.00 0.00 4.02
2060 2140 1.409427 CCTTAGAGAGTTAGGGCGTGG 59.591 57.143 0.00 0.00 0.00 4.94
2061 2141 2.099427 GACCTTAGAGAGTTAGGGCGTG 59.901 54.545 0.00 0.00 33.22 5.34
2062 2142 2.025131 AGACCTTAGAGAGTTAGGGCGT 60.025 50.000 0.00 0.00 42.19 5.68
2063 2143 2.619646 GAGACCTTAGAGAGTTAGGGCG 59.380 54.545 0.00 0.00 42.19 6.13
2064 2144 2.619646 CGAGACCTTAGAGAGTTAGGGC 59.380 54.545 0.00 0.00 37.34 5.19
2065 2145 2.619646 GCGAGACCTTAGAGAGTTAGGG 59.380 54.545 0.00 0.00 33.22 3.53
2066 2146 3.280295 TGCGAGACCTTAGAGAGTTAGG 58.720 50.000 0.00 0.00 35.14 2.69
2067 2147 4.034742 GTCTGCGAGACCTTAGAGAGTTAG 59.965 50.000 5.33 0.00 39.28 2.34
2068 2148 3.940221 GTCTGCGAGACCTTAGAGAGTTA 59.060 47.826 5.33 0.00 39.28 2.24
2069 2149 2.750712 GTCTGCGAGACCTTAGAGAGTT 59.249 50.000 5.33 0.00 39.28 3.01
2070 2150 2.361789 GTCTGCGAGACCTTAGAGAGT 58.638 52.381 5.33 0.00 39.28 3.24
2071 2151 1.329292 CGTCTGCGAGACCTTAGAGAG 59.671 57.143 9.71 0.00 42.12 3.20
2072 2152 1.066358 TCGTCTGCGAGACCTTAGAGA 60.066 52.381 9.71 0.27 42.12 3.10
2073 2153 1.370609 TCGTCTGCGAGACCTTAGAG 58.629 55.000 9.71 0.00 42.12 2.43
2074 2154 3.545724 TCGTCTGCGAGACCTTAGA 57.454 52.632 9.71 1.10 42.12 2.10
2083 2163 1.834458 TTCGTCGAGTTCGTCTGCGA 61.834 55.000 1.07 5.55 46.36 5.10
2084 2164 1.439858 TTCGTCGAGTTCGTCTGCG 60.440 57.895 1.07 3.52 40.80 5.18
2085 2165 0.385723 AGTTCGTCGAGTTCGTCTGC 60.386 55.000 1.07 0.00 40.80 4.26
2086 2166 1.593426 GAGTTCGTCGAGTTCGTCTG 58.407 55.000 1.07 0.00 40.80 3.51
2097 2177 2.097347 GTCTTTGTCTTGCGAGTTCGTC 60.097 50.000 0.00 0.00 42.22 4.20
2098 2178 1.859080 GTCTTTGTCTTGCGAGTTCGT 59.141 47.619 0.00 0.00 42.22 3.85
2099 2179 1.858458 TGTCTTTGTCTTGCGAGTTCG 59.142 47.619 0.00 0.00 43.27 3.95
2100 2180 2.607635 TGTGTCTTTGTCTTGCGAGTTC 59.392 45.455 0.00 0.00 0.00 3.01
2101 2181 2.627945 TGTGTCTTTGTCTTGCGAGTT 58.372 42.857 0.00 0.00 0.00 3.01
2102 2182 2.309528 TGTGTCTTTGTCTTGCGAGT 57.690 45.000 0.00 0.00 0.00 4.18
2103 2183 2.866156 TCTTGTGTCTTTGTCTTGCGAG 59.134 45.455 0.00 0.00 0.00 5.03
2104 2184 2.899976 TCTTGTGTCTTTGTCTTGCGA 58.100 42.857 0.00 0.00 0.00 5.10
2105 2185 3.885484 ATCTTGTGTCTTTGTCTTGCG 57.115 42.857 0.00 0.00 0.00 4.85
2106 2186 8.507249 AGTATAAATCTTGTGTCTTTGTCTTGC 58.493 33.333 0.00 0.00 0.00 4.01
2107 2187 9.817365 CAGTATAAATCTTGTGTCTTTGTCTTG 57.183 33.333 0.00 0.00 0.00 3.02
2108 2188 9.003658 CCAGTATAAATCTTGTGTCTTTGTCTT 57.996 33.333 0.00 0.00 0.00 3.01
2109 2189 8.157476 ACCAGTATAAATCTTGTGTCTTTGTCT 58.843 33.333 0.00 0.00 0.00 3.41
2110 2190 8.324163 ACCAGTATAAATCTTGTGTCTTTGTC 57.676 34.615 0.00 0.00 0.00 3.18
2111 2191 8.691661 AACCAGTATAAATCTTGTGTCTTTGT 57.308 30.769 0.00 0.00 0.00 2.83
2112 2192 7.957484 CGAACCAGTATAAATCTTGTGTCTTTG 59.043 37.037 0.00 0.00 0.00 2.77
2113 2193 7.119262 CCGAACCAGTATAAATCTTGTGTCTTT 59.881 37.037 0.00 0.00 0.00 2.52
2114 2194 6.594159 CCGAACCAGTATAAATCTTGTGTCTT 59.406 38.462 0.00 0.00 0.00 3.01
2115 2195 6.106673 CCGAACCAGTATAAATCTTGTGTCT 58.893 40.000 0.00 0.00 0.00 3.41
2116 2196 5.293569 CCCGAACCAGTATAAATCTTGTGTC 59.706 44.000 0.00 0.00 0.00 3.67
2117 2197 5.183228 CCCGAACCAGTATAAATCTTGTGT 58.817 41.667 0.00 0.00 0.00 3.72
2118 2198 4.035208 GCCCGAACCAGTATAAATCTTGTG 59.965 45.833 0.00 0.00 0.00 3.33
2119 2199 4.196971 GCCCGAACCAGTATAAATCTTGT 58.803 43.478 0.00 0.00 0.00 3.16
2120 2200 3.564225 GGCCCGAACCAGTATAAATCTTG 59.436 47.826 0.00 0.00 0.00 3.02
2121 2201 3.201266 TGGCCCGAACCAGTATAAATCTT 59.799 43.478 0.00 0.00 33.75 2.40
2122 2202 2.775384 TGGCCCGAACCAGTATAAATCT 59.225 45.455 0.00 0.00 33.75 2.40
2123 2203 2.876550 GTGGCCCGAACCAGTATAAATC 59.123 50.000 0.00 0.00 41.46 2.17
2124 2204 2.422377 GGTGGCCCGAACCAGTATAAAT 60.422 50.000 0.00 0.00 41.46 1.40
2125 2205 1.065272 GGTGGCCCGAACCAGTATAAA 60.065 52.381 0.00 0.00 41.46 1.40
2126 2206 0.542805 GGTGGCCCGAACCAGTATAA 59.457 55.000 0.00 0.00 41.46 0.98
2127 2207 2.214235 GGTGGCCCGAACCAGTATA 58.786 57.895 0.00 0.00 41.46 1.47
2128 2208 2.995547 GGTGGCCCGAACCAGTAT 59.004 61.111 0.00 0.00 41.46 2.12
2151 2231 4.028825 ACACTGGAGTAGGGTATTACACC 58.971 47.826 0.00 0.00 42.62 4.16
2152 2232 4.142004 CCACACTGGAGTAGGGTATTACAC 60.142 50.000 0.00 0.00 42.52 2.90
2153 2233 4.028131 CCACACTGGAGTAGGGTATTACA 58.972 47.826 0.00 0.00 42.52 2.41
2154 2234 4.028825 ACCACACTGGAGTAGGGTATTAC 58.971 47.826 0.00 0.00 42.52 1.89
2155 2235 4.028131 CACCACACTGGAGTAGGGTATTA 58.972 47.826 0.00 0.00 42.52 0.98
2156 2236 2.838202 CACCACACTGGAGTAGGGTATT 59.162 50.000 0.00 0.00 42.52 1.89
2157 2237 2.467880 CACCACACTGGAGTAGGGTAT 58.532 52.381 0.00 0.00 42.52 2.73
2158 2238 1.551560 CCACCACACTGGAGTAGGGTA 60.552 57.143 0.00 0.00 42.52 3.69
2159 2239 0.836400 CCACCACACTGGAGTAGGGT 60.836 60.000 0.00 0.00 46.36 4.34
2160 2240 0.836400 ACCACCACACTGGAGTAGGG 60.836 60.000 0.00 0.00 40.96 3.53
2161 2241 0.321671 CACCACCACACTGGAGTAGG 59.678 60.000 0.00 0.00 40.96 3.18
2162 2242 0.321671 CCACCACCACACTGGAGTAG 59.678 60.000 0.00 0.00 40.96 2.57
2163 2243 0.399376 ACCACCACCACACTGGAGTA 60.399 55.000 0.00 0.00 40.96 2.59
2164 2244 1.692749 ACCACCACCACACTGGAGT 60.693 57.895 0.00 0.00 40.96 3.85
2165 2245 1.227943 CACCACCACCACACTGGAG 60.228 63.158 0.00 0.00 40.96 3.86
2166 2246 2.751731 CCACCACCACCACACTGGA 61.752 63.158 0.00 0.00 40.96 3.86
2167 2247 2.067932 ATCCACCACCACCACACTGG 62.068 60.000 0.00 0.00 45.02 4.00
2168 2248 0.178992 AATCCACCACCACCACACTG 60.179 55.000 0.00 0.00 0.00 3.66
2169 2249 0.178992 CAATCCACCACCACCACACT 60.179 55.000 0.00 0.00 0.00 3.55
2170 2250 1.805428 GCAATCCACCACCACCACAC 61.805 60.000 0.00 0.00 0.00 3.82
2171 2251 1.530419 GCAATCCACCACCACCACA 60.530 57.895 0.00 0.00 0.00 4.17
2172 2252 2.275380 GGCAATCCACCACCACCAC 61.275 63.158 0.00 0.00 0.00 4.16
2173 2253 2.117206 GGCAATCCACCACCACCA 59.883 61.111 0.00 0.00 0.00 4.17
2174 2254 1.678970 GAGGCAATCCACCACCACC 60.679 63.158 0.00 0.00 33.74 4.61
2175 2255 0.251341 AAGAGGCAATCCACCACCAC 60.251 55.000 0.00 0.00 33.74 4.16
2176 2256 0.251297 CAAGAGGCAATCCACCACCA 60.251 55.000 0.00 0.00 33.74 4.17
2177 2257 0.967380 CCAAGAGGCAATCCACCACC 60.967 60.000 0.00 0.00 33.74 4.61
2178 2258 0.967380 CCCAAGAGGCAATCCACCAC 60.967 60.000 0.00 0.00 33.74 4.16
2179 2259 1.383799 CCCAAGAGGCAATCCACCA 59.616 57.895 0.00 0.00 33.74 4.17
2180 2260 4.344237 CCCAAGAGGCAATCCACC 57.656 61.111 0.00 0.00 33.74 4.61
2189 2269 0.181114 TTCATCATCCGCCCAAGAGG 59.819 55.000 0.00 0.00 39.47 3.69
2190 2270 1.303309 GTTCATCATCCGCCCAAGAG 58.697 55.000 0.00 0.00 0.00 2.85
2191 2271 0.617935 TGTTCATCATCCGCCCAAGA 59.382 50.000 0.00 0.00 0.00 3.02
2192 2272 1.019673 CTGTTCATCATCCGCCCAAG 58.980 55.000 0.00 0.00 0.00 3.61
2193 2273 0.327924 ACTGTTCATCATCCGCCCAA 59.672 50.000 0.00 0.00 0.00 4.12
2194 2274 1.134521 GTACTGTTCATCATCCGCCCA 60.135 52.381 0.00 0.00 0.00 5.36
2195 2275 1.134521 TGTACTGTTCATCATCCGCCC 60.135 52.381 0.00 0.00 0.00 6.13
2196 2276 2.309528 TGTACTGTTCATCATCCGCC 57.690 50.000 0.00 0.00 0.00 6.13
2197 2277 2.609459 CCTTGTACTGTTCATCATCCGC 59.391 50.000 0.00 0.00 0.00 5.54
2198 2278 4.115516 CTCCTTGTACTGTTCATCATCCG 58.884 47.826 0.00 0.00 0.00 4.18
2199 2279 5.344743 TCTCCTTGTACTGTTCATCATCC 57.655 43.478 0.00 0.00 0.00 3.51
2200 2280 6.634805 TCTTCTCCTTGTACTGTTCATCATC 58.365 40.000 0.00 0.00 0.00 2.92
2201 2281 6.611613 TCTTCTCCTTGTACTGTTCATCAT 57.388 37.500 0.00 0.00 0.00 2.45
2202 2282 6.183360 TGTTCTTCTCCTTGTACTGTTCATCA 60.183 38.462 0.00 0.00 0.00 3.07
2203 2283 6.223852 TGTTCTTCTCCTTGTACTGTTCATC 58.776 40.000 0.00 0.00 0.00 2.92
2204 2284 6.174720 TGTTCTTCTCCTTGTACTGTTCAT 57.825 37.500 0.00 0.00 0.00 2.57
2205 2285 5.607939 TGTTCTTCTCCTTGTACTGTTCA 57.392 39.130 0.00 0.00 0.00 3.18
2206 2286 5.236695 GGTTGTTCTTCTCCTTGTACTGTTC 59.763 44.000 0.00 0.00 0.00 3.18
2207 2287 5.104485 AGGTTGTTCTTCTCCTTGTACTGTT 60.104 40.000 0.00 0.00 0.00 3.16
2208 2288 4.409247 AGGTTGTTCTTCTCCTTGTACTGT 59.591 41.667 0.00 0.00 0.00 3.55
2209 2289 4.962155 AGGTTGTTCTTCTCCTTGTACTG 58.038 43.478 0.00 0.00 0.00 2.74
2210 2290 4.040584 GGAGGTTGTTCTTCTCCTTGTACT 59.959 45.833 0.00 0.00 42.70 2.73
2211 2291 4.316645 GGAGGTTGTTCTTCTCCTTGTAC 58.683 47.826 0.00 0.00 42.70 2.90
2212 2292 4.618920 GGAGGTTGTTCTTCTCCTTGTA 57.381 45.455 0.00 0.00 42.70 2.41
2213 2293 3.493767 GGAGGTTGTTCTTCTCCTTGT 57.506 47.619 0.00 0.00 42.70 3.16
2217 2297 2.027653 CCTCAGGAGGTTGTTCTTCTCC 60.028 54.545 7.19 0.00 45.46 3.71
2218 2298 3.326836 CCTCAGGAGGTTGTTCTTCTC 57.673 52.381 7.19 0.00 43.61 2.87
2230 2310 1.974236 AGAACACCTCAACCTCAGGAG 59.026 52.381 0.00 0.00 34.75 3.69
2231 2311 2.103153 AGAACACCTCAACCTCAGGA 57.897 50.000 0.00 0.00 34.75 3.86
2232 2312 2.158755 ACAAGAACACCTCAACCTCAGG 60.159 50.000 0.00 0.00 37.03 3.86
2233 2313 2.874701 CACAAGAACACCTCAACCTCAG 59.125 50.000 0.00 0.00 0.00 3.35
2234 2314 2.917933 CACAAGAACACCTCAACCTCA 58.082 47.619 0.00 0.00 0.00 3.86
2235 2315 1.604278 GCACAAGAACACCTCAACCTC 59.396 52.381 0.00 0.00 0.00 3.85
2236 2316 1.212935 AGCACAAGAACACCTCAACCT 59.787 47.619 0.00 0.00 0.00 3.50
2237 2317 1.680338 AGCACAAGAACACCTCAACC 58.320 50.000 0.00 0.00 0.00 3.77
2238 2318 2.223572 CCAAGCACAAGAACACCTCAAC 60.224 50.000 0.00 0.00 0.00 3.18
2239 2319 2.023673 CCAAGCACAAGAACACCTCAA 58.976 47.619 0.00 0.00 0.00 3.02
2240 2320 1.679139 CCAAGCACAAGAACACCTCA 58.321 50.000 0.00 0.00 0.00 3.86
2241 2321 0.312102 GCCAAGCACAAGAACACCTC 59.688 55.000 0.00 0.00 0.00 3.85
2242 2322 1.447317 CGCCAAGCACAAGAACACCT 61.447 55.000 0.00 0.00 0.00 4.00
2243 2323 1.008538 CGCCAAGCACAAGAACACC 60.009 57.895 0.00 0.00 0.00 4.16
2244 2324 0.380378 TTCGCCAAGCACAAGAACAC 59.620 50.000 0.00 0.00 0.00 3.32
2245 2325 0.380378 GTTCGCCAAGCACAAGAACA 59.620 50.000 2.27 0.00 40.41 3.18
2246 2326 0.663153 AGTTCGCCAAGCACAAGAAC 59.337 50.000 0.00 0.00 40.84 3.01
2247 2327 1.065401 CAAGTTCGCCAAGCACAAGAA 59.935 47.619 0.00 0.00 0.00 2.52
2248 2328 0.662619 CAAGTTCGCCAAGCACAAGA 59.337 50.000 0.00 0.00 0.00 3.02
2249 2329 0.381801 ACAAGTTCGCCAAGCACAAG 59.618 50.000 0.00 0.00 0.00 3.16
2250 2330 0.100325 CACAAGTTCGCCAAGCACAA 59.900 50.000 0.00 0.00 0.00 3.33
2251 2331 1.029408 ACACAAGTTCGCCAAGCACA 61.029 50.000 0.00 0.00 0.00 4.57
2252 2332 0.592247 CACACAAGTTCGCCAAGCAC 60.592 55.000 0.00 0.00 0.00 4.40
2253 2333 1.723608 CCACACAAGTTCGCCAAGCA 61.724 55.000 0.00 0.00 0.00 3.91
2254 2334 1.008538 CCACACAAGTTCGCCAAGC 60.009 57.895 0.00 0.00 0.00 4.01
2255 2335 1.101049 ACCCACACAAGTTCGCCAAG 61.101 55.000 0.00 0.00 0.00 3.61
2256 2336 1.077357 ACCCACACAAGTTCGCCAA 60.077 52.632 0.00 0.00 0.00 4.52
2257 2337 1.821759 CACCCACACAAGTTCGCCA 60.822 57.895 0.00 0.00 0.00 5.69
2258 2338 1.507141 CTCACCCACACAAGTTCGCC 61.507 60.000 0.00 0.00 0.00 5.54
2259 2339 0.531974 TCTCACCCACACAAGTTCGC 60.532 55.000 0.00 0.00 0.00 4.70
2260 2340 1.800586 CATCTCACCCACACAAGTTCG 59.199 52.381 0.00 0.00 0.00 3.95
2261 2341 1.537202 GCATCTCACCCACACAAGTTC 59.463 52.381 0.00 0.00 0.00 3.01
2262 2342 1.609208 GCATCTCACCCACACAAGTT 58.391 50.000 0.00 0.00 0.00 2.66
2263 2343 0.250901 GGCATCTCACCCACACAAGT 60.251 55.000 0.00 0.00 0.00 3.16
2264 2344 0.037303 AGGCATCTCACCCACACAAG 59.963 55.000 0.00 0.00 0.00 3.16
2265 2345 0.036732 GAGGCATCTCACCCACACAA 59.963 55.000 0.00 0.00 39.74 3.33
2266 2346 0.837691 AGAGGCATCTCACCCACACA 60.838 55.000 0.00 0.00 42.34 3.72
2267 2347 0.392193 CAGAGGCATCTCACCCACAC 60.392 60.000 0.00 0.00 42.34 3.82
2268 2348 0.545071 TCAGAGGCATCTCACCCACA 60.545 55.000 0.00 0.00 42.34 4.17
2269 2349 0.615331 TTCAGAGGCATCTCACCCAC 59.385 55.000 0.00 0.00 42.34 4.61
2270 2350 1.211212 CATTCAGAGGCATCTCACCCA 59.789 52.381 0.00 0.00 42.34 4.51
2271 2351 1.487976 TCATTCAGAGGCATCTCACCC 59.512 52.381 0.00 0.00 42.34 4.61
2272 2352 2.836262 CTCATTCAGAGGCATCTCACC 58.164 52.381 0.00 0.00 42.34 4.02
2282 2362 5.649395 AGAGAGAGAGTGAACTCATTCAGAG 59.351 44.000 12.76 0.00 45.58 3.35
2283 2363 5.569355 AGAGAGAGAGTGAACTCATTCAGA 58.431 41.667 12.76 0.00 45.58 3.27
2284 2364 5.649395 AGAGAGAGAGAGTGAACTCATTCAG 59.351 44.000 12.76 0.00 45.58 3.02
2285 2365 5.569355 AGAGAGAGAGAGTGAACTCATTCA 58.431 41.667 12.76 0.00 45.21 2.57
2286 2366 5.882557 AGAGAGAGAGAGAGTGAACTCATTC 59.117 44.000 12.76 9.09 45.21 2.67
2287 2367 5.819991 AGAGAGAGAGAGAGTGAACTCATT 58.180 41.667 12.76 0.31 45.21 2.57
2288 2368 5.431765 GAGAGAGAGAGAGAGTGAACTCAT 58.568 45.833 12.76 0.92 45.21 2.90
2289 2369 4.832248 GAGAGAGAGAGAGAGTGAACTCA 58.168 47.826 12.76 0.00 45.21 3.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.