Multiple sequence alignment - TraesCS5A01G234300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G234300 chr5A 100.000 3067 0 0 1 3067 450539873 450542939 0.000000e+00 5664.0
1 TraesCS5A01G234300 chr5A 91.800 1061 69 14 1015 2068 450474859 450473810 0.000000e+00 1461.0
2 TraesCS5A01G234300 chr5A 90.411 803 42 17 405 1186 450507850 450508638 0.000000e+00 1024.0
3 TraesCS5A01G234300 chr5A 83.765 425 50 13 1 413 450507201 450507618 4.800000e-103 385.0
4 TraesCS5A01G234300 chr5D 87.883 2187 134 51 351 2475 350219554 350221671 0.000000e+00 2449.0
5 TraesCS5A01G234300 chr5D 90.798 1065 71 19 1015 2068 349981730 349980682 0.000000e+00 1399.0
6 TraesCS5A01G234300 chr5D 86.010 193 13 5 2498 2680 350221662 350221850 8.680000e-46 195.0
7 TraesCS5A01G234300 chr5B 90.309 1651 77 33 797 2407 410722182 410723789 0.000000e+00 2085.0
8 TraesCS5A01G234300 chr5B 89.888 1068 85 17 1015 2068 410598862 410597804 0.000000e+00 1352.0
9 TraesCS5A01G234300 chr5B 90.411 219 15 2 2437 2652 410724905 410725120 1.800000e-72 283.0
10 TraesCS5A01G234300 chr5B 87.356 174 17 2 336 508 410694357 410694526 8.680000e-46 195.0
11 TraesCS5A01G234300 chr5B 94.595 111 5 1 697 807 410722046 410722155 1.460000e-38 171.0
12 TraesCS5A01G234300 chr6B 81.818 605 76 21 1450 2025 624496390 624495791 7.690000e-131 477.0
13 TraesCS5A01G234300 chr6A 81.773 598 83 16 1450 2025 559132730 559132137 7.690000e-131 477.0
14 TraesCS5A01G234300 chr6A 81.438 598 85 16 1450 2025 559002784 559002191 1.670000e-127 466.0
15 TraesCS5A01G234300 chr6D 81.488 605 78 18 1450 2025 414256784 414256185 1.670000e-127 466.0
16 TraesCS5A01G234300 chr2D 85.455 55 7 1 2884 2937 277047360 277047306 4.270000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G234300 chr5A 450539873 450542939 3066 False 5664.000000 5664 100.000000 1 3067 1 chr5A.!!$F1 3066
1 TraesCS5A01G234300 chr5A 450473810 450474859 1049 True 1461.000000 1461 91.800000 1015 2068 1 chr5A.!!$R1 1053
2 TraesCS5A01G234300 chr5A 450507201 450508638 1437 False 704.500000 1024 87.088000 1 1186 2 chr5A.!!$F2 1185
3 TraesCS5A01G234300 chr5D 349980682 349981730 1048 True 1399.000000 1399 90.798000 1015 2068 1 chr5D.!!$R1 1053
4 TraesCS5A01G234300 chr5D 350219554 350221850 2296 False 1322.000000 2449 86.946500 351 2680 2 chr5D.!!$F1 2329
5 TraesCS5A01G234300 chr5B 410597804 410598862 1058 True 1352.000000 1352 89.888000 1015 2068 1 chr5B.!!$R1 1053
6 TraesCS5A01G234300 chr5B 410722046 410725120 3074 False 846.333333 2085 91.771667 697 2652 3 chr5B.!!$F2 1955
7 TraesCS5A01G234300 chr6B 624495791 624496390 599 True 477.000000 477 81.818000 1450 2025 1 chr6B.!!$R1 575
8 TraesCS5A01G234300 chr6A 559132137 559132730 593 True 477.000000 477 81.773000 1450 2025 1 chr6A.!!$R2 575
9 TraesCS5A01G234300 chr6A 559002191 559002784 593 True 466.000000 466 81.438000 1450 2025 1 chr6A.!!$R1 575
10 TraesCS5A01G234300 chr6D 414256185 414256784 599 True 466.000000 466 81.488000 1450 2025 1 chr6D.!!$R1 575

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
557 807 0.036732 TGCAACGGAAGAGCAGGATT 59.963 50.0 0.0 0.0 39.75 3.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2498 4004 0.24746 TGGTGGCATGTCTCTTCTCG 59.753 55.0 0.0 0.0 0.0 4.04 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
58 59 3.209812 CCGATCGCCTCGTCAGGA 61.210 66.667 10.32 0.00 46.18 3.86
70 71 3.430098 CCTCGTCAGGAAAGGATCTGAAG 60.430 52.174 0.00 0.00 43.65 3.02
86 88 4.606457 CTGAAGAACTTTATTCAGGCCG 57.394 45.455 15.57 0.00 46.98 6.13
87 89 2.747446 TGAAGAACTTTATTCAGGCCGC 59.253 45.455 0.00 0.00 33.88 6.53
88 90 1.751437 AGAACTTTATTCAGGCCGCC 58.249 50.000 0.00 0.00 0.00 6.13
89 91 1.004277 AGAACTTTATTCAGGCCGCCA 59.996 47.619 13.15 0.00 0.00 5.69
90 92 2.024414 GAACTTTATTCAGGCCGCCAT 58.976 47.619 13.15 0.00 0.00 4.40
91 93 1.680338 ACTTTATTCAGGCCGCCATC 58.320 50.000 13.15 0.00 0.00 3.51
92 94 0.588252 CTTTATTCAGGCCGCCATCG 59.412 55.000 13.15 0.00 0.00 3.84
93 95 0.107410 TTTATTCAGGCCGCCATCGT 60.107 50.000 13.15 0.00 0.00 3.73
94 96 0.753867 TTATTCAGGCCGCCATCGTA 59.246 50.000 13.15 0.00 0.00 3.43
95 97 0.317160 TATTCAGGCCGCCATCGTAG 59.683 55.000 13.15 0.00 0.00 3.51
96 98 1.686325 ATTCAGGCCGCCATCGTAGT 61.686 55.000 13.15 0.00 0.00 2.73
99 102 4.203076 GGCCGCCATCGTAGTCGT 62.203 66.667 3.91 0.00 38.33 4.34
104 107 0.521867 CGCCATCGTAGTCGTCGAAA 60.522 55.000 0.00 0.00 40.61 3.46
122 125 4.988540 TCGAAATCAAGACGATGAACAACT 59.011 37.500 0.00 0.00 33.40 3.16
132 135 5.008316 AGACGATGAACAACTTAAAACACCC 59.992 40.000 0.00 0.00 0.00 4.61
136 139 5.570234 TGAACAACTTAAAACACCCAGAC 57.430 39.130 0.00 0.00 0.00 3.51
138 141 6.416415 TGAACAACTTAAAACACCCAGACTA 58.584 36.000 0.00 0.00 0.00 2.59
139 142 6.316890 TGAACAACTTAAAACACCCAGACTAC 59.683 38.462 0.00 0.00 0.00 2.73
140 143 5.747342 ACAACTTAAAACACCCAGACTACA 58.253 37.500 0.00 0.00 0.00 2.74
142 145 6.660094 ACAACTTAAAACACCCAGACTACAAA 59.340 34.615 0.00 0.00 0.00 2.83
154 157 6.184789 CCCAGACTACAAAGGCCTAAAAATA 58.815 40.000 5.16 0.00 0.00 1.40
160 163 9.569167 GACTACAAAGGCCTAAAAATAATTCAC 57.431 33.333 5.16 0.00 0.00 3.18
161 164 8.241367 ACTACAAAGGCCTAAAAATAATTCACG 58.759 33.333 5.16 0.00 0.00 4.35
165 168 3.430931 GCCTAAAAATAATTCACGCGCA 58.569 40.909 5.73 0.00 0.00 6.09
167 170 4.085619 GCCTAAAAATAATTCACGCGCATG 60.086 41.667 5.73 0.97 0.00 4.06
174 177 1.775039 ATTCACGCGCATGGATTCGG 61.775 55.000 5.73 0.00 0.00 4.30
179 182 3.585990 CGCATGGATTCGGTGCCC 61.586 66.667 0.00 0.00 35.51 5.36
196 200 4.065281 CCCCTCACCGTCGACCAC 62.065 72.222 10.58 0.00 0.00 4.16
197 201 2.989824 CCCTCACCGTCGACCACT 60.990 66.667 10.58 0.00 0.00 4.00
221 225 3.338250 ATTTGCGGAGGGGAGCCA 61.338 61.111 0.00 0.00 0.00 4.75
227 231 3.787001 GGAGGGGAGCCACCGAAG 61.787 72.222 0.00 0.00 40.11 3.79
248 252 1.603171 TGGCGCTGAAAGATTGGCA 60.603 52.632 7.64 0.00 35.86 4.92
251 255 0.248784 GCGCTGAAAGATTGGCATCC 60.249 55.000 0.00 0.00 34.07 3.51
252 256 1.386533 CGCTGAAAGATTGGCATCCT 58.613 50.000 0.00 0.00 34.07 3.24
253 257 1.332997 CGCTGAAAGATTGGCATCCTC 59.667 52.381 0.00 0.00 34.07 3.71
254 258 2.652590 GCTGAAAGATTGGCATCCTCT 58.347 47.619 0.00 0.00 34.07 3.69
256 260 2.950309 CTGAAAGATTGGCATCCTCTGG 59.050 50.000 0.00 0.00 34.07 3.86
293 302 0.607489 CAGGCACCCACAGGAAAGAG 60.607 60.000 0.00 0.00 36.73 2.85
296 305 1.371183 CACCCACAGGAAAGAGCGA 59.629 57.895 0.00 0.00 36.73 4.93
322 331 0.606096 GTTTGCCAAGGCCGGTTTAT 59.394 50.000 8.89 0.00 41.09 1.40
323 332 1.819903 GTTTGCCAAGGCCGGTTTATA 59.180 47.619 8.89 0.00 41.09 0.98
333 342 6.350277 CCAAGGCCGGTTTATAGATACTCTAG 60.350 46.154 1.90 0.00 31.67 2.43
381 390 6.099125 TCCTCCCATCGACTGACATTAATTTA 59.901 38.462 0.00 0.00 0.00 1.40
385 394 5.333339 CCATCGACTGACATTAATTTAGGCG 60.333 44.000 10.76 10.76 41.06 5.52
413 422 6.730175 TCACTCGTCTCAGATTAATCTTAGC 58.270 40.000 15.49 11.64 34.22 3.09
488 738 2.099592 ACGATTTCAATGCCAATGCGAT 59.900 40.909 0.00 0.00 41.78 4.58
505 755 0.227234 GATATGCACGTGCTTCGACG 59.773 55.000 37.59 0.95 45.09 5.12
532 782 3.243334 GCGTACTACCTCTGGATAACCAC 60.243 52.174 0.00 0.00 41.77 4.16
534 784 2.385803 ACTACCTCTGGATAACCACCG 58.614 52.381 0.00 0.00 41.77 4.94
537 787 0.179073 CCTCTGGATAACCACCGCTG 60.179 60.000 0.00 0.00 41.77 5.18
555 805 1.301716 GTGCAACGGAAGAGCAGGA 60.302 57.895 0.00 0.00 43.58 3.86
556 806 0.674895 GTGCAACGGAAGAGCAGGAT 60.675 55.000 0.00 0.00 43.58 3.24
557 807 0.036732 TGCAACGGAAGAGCAGGATT 59.963 50.000 0.00 0.00 39.75 3.01
829 1130 2.285602 GCGCATCAATACGTACACTTGG 60.286 50.000 0.30 0.00 0.00 3.61
940 1259 1.138464 TGCAGAGAAGCCATAGAGCTG 59.862 52.381 0.00 0.00 44.11 4.24
943 1262 0.250252 GAGAAGCCATAGAGCTGCCC 60.250 60.000 0.00 0.00 44.11 5.36
950 1269 0.109365 CATAGAGCTGCCCGAGATCG 60.109 60.000 0.00 0.00 42.35 3.69
1124 1454 3.432326 GGATTCTTCCAGGTGAATACGCT 60.432 47.826 9.42 0.00 42.12 5.07
1125 1455 2.672961 TCTTCCAGGTGAATACGCTG 57.327 50.000 0.00 0.00 31.06 5.18
1126 1456 1.207089 TCTTCCAGGTGAATACGCTGG 59.793 52.381 0.00 0.00 42.16 4.85
1128 1458 1.496060 TCCAGGTGAATACGCTGGAT 58.504 50.000 0.00 0.00 43.37 3.41
1134 1495 3.134623 AGGTGAATACGCTGGATCATGAA 59.865 43.478 0.00 0.00 0.00 2.57
1136 1497 3.060272 GTGAATACGCTGGATCATGAACG 60.060 47.826 0.00 1.69 0.00 3.95
1201 1562 4.389890 TGATTTTGCTTTGCTCTTGTGT 57.610 36.364 0.00 0.00 0.00 3.72
1202 1563 4.114073 TGATTTTGCTTTGCTCTTGTGTG 58.886 39.130 0.00 0.00 0.00 3.82
1279 1655 1.065126 GGTGGAGAAGATGACCAAGGG 60.065 57.143 0.00 0.00 35.40 3.95
1424 1800 0.389391 CCAACATCGCCGAGATACCT 59.611 55.000 0.00 0.00 37.52 3.08
1529 1905 3.527641 GAGAACCTCGGCCTCGAT 58.472 61.111 0.00 0.00 45.04 3.59
1714 2090 4.486503 GCTCCAGCTGCTCAGGGG 62.487 72.222 8.66 0.00 38.21 4.79
1812 2188 1.741770 GGCAGGTACAAGAGCGTGG 60.742 63.158 0.00 0.00 0.00 4.94
1877 2253 1.265454 CCTCCTTCTACAACCCGGCT 61.265 60.000 0.00 0.00 0.00 5.52
2033 2448 0.329596 AGGCCTTCAAGTCCATGGAC 59.670 55.000 33.72 33.72 44.86 4.02
2068 2483 0.872021 CTCATCGCCACCGCTTAGAC 60.872 60.000 0.00 0.00 0.00 2.59
2069 2484 1.883084 CATCGCCACCGCTTAGACC 60.883 63.158 0.00 0.00 0.00 3.85
2077 2492 0.763035 ACCGCTTAGACCCAACAACT 59.237 50.000 0.00 0.00 0.00 3.16
2081 2496 2.608752 CGCTTAGACCCAACAACTACGT 60.609 50.000 0.00 0.00 0.00 3.57
2082 2497 3.366273 CGCTTAGACCCAACAACTACGTA 60.366 47.826 0.00 0.00 0.00 3.57
2083 2498 3.922850 GCTTAGACCCAACAACTACGTAC 59.077 47.826 0.00 0.00 0.00 3.67
2106 2521 2.354401 CCCTTGCTCTGCTCTCCGA 61.354 63.158 0.00 0.00 0.00 4.55
2160 2575 3.683847 GCACATAGGATGCTCCAGAGTTT 60.684 47.826 0.00 0.00 39.61 2.66
2190 2605 2.450609 ACGTACTAAACCACTGGCTG 57.549 50.000 0.00 0.00 0.00 4.85
2246 2663 0.594110 GTGCTACGCCTAGCTAGGAG 59.406 60.000 38.74 36.36 46.63 3.69
2247 2664 0.537600 TGCTACGCCTAGCTAGGAGG 60.538 60.000 38.74 29.92 46.08 4.30
2248 2665 0.250814 GCTACGCCTAGCTAGGAGGA 60.251 60.000 38.74 32.01 46.08 3.71
2249 2666 1.614850 GCTACGCCTAGCTAGGAGGAT 60.615 57.143 38.74 24.10 46.08 3.24
2250 2667 2.355920 GCTACGCCTAGCTAGGAGGATA 60.356 54.545 38.74 23.94 46.08 2.59
2251 2668 3.686120 GCTACGCCTAGCTAGGAGGATAT 60.686 52.174 38.74 23.11 46.08 1.63
2255 2672 3.880490 CGCCTAGCTAGGAGGATATGTAG 59.120 52.174 38.74 11.78 46.63 2.74
2340 2758 4.894784 TCTGTGTCTGTTCTTATTCCCAC 58.105 43.478 0.00 0.00 0.00 4.61
2360 2778 1.601914 CGGGCATCGTATCGATTGTCA 60.602 52.381 1.71 0.00 44.59 3.58
2361 2779 2.479837 GGGCATCGTATCGATTGTCAA 58.520 47.619 1.71 0.00 44.59 3.18
2403 2824 3.162666 CTCCTTGTGTGAGGGTACTACA 58.837 50.000 0.00 0.00 37.41 2.74
2411 2832 4.015084 TGTGAGGGTACTACAGCTTCTAC 58.985 47.826 0.00 0.00 32.28 2.59
2412 2833 3.380954 GTGAGGGTACTACAGCTTCTACC 59.619 52.174 0.00 0.00 32.28 3.18
2414 2835 3.363627 AGGGTACTACAGCTTCTACCAC 58.636 50.000 7.75 0.28 31.73 4.16
2417 2838 3.429135 GGTACTACAGCTTCTACCACTGC 60.429 52.174 0.00 0.00 34.72 4.40
2418 2839 1.202582 ACTACAGCTTCTACCACTGCG 59.797 52.381 0.00 0.00 34.72 5.18
2419 2840 0.108804 TACAGCTTCTACCACTGCGC 60.109 55.000 0.00 0.00 34.72 6.09
2420 2841 1.079543 CAGCTTCTACCACTGCGCT 60.080 57.895 9.73 0.00 0.00 5.92
2424 2845 0.320771 CTTCTACCACTGCGCTGGTT 60.321 55.000 24.42 10.46 42.29 3.67
2425 2846 0.602638 TTCTACCACTGCGCTGGTTG 60.603 55.000 24.42 21.72 42.29 3.77
2426 2847 2.031919 TACCACTGCGCTGGTTGG 59.968 61.111 24.42 21.23 42.29 3.77
2454 3960 2.030412 AGCATCACGCCAACACGA 59.970 55.556 0.00 0.00 44.04 4.35
2475 3981 2.813179 GCATCGCGGCGAACTGAAT 61.813 57.895 29.93 8.80 39.99 2.57
2487 3993 4.546570 GCGAACTGAATTTTTACTTGCCT 58.453 39.130 0.00 0.00 0.00 4.75
2488 3994 4.617223 GCGAACTGAATTTTTACTTGCCTC 59.383 41.667 0.00 0.00 0.00 4.70
2553 4066 5.230726 CGAGAACATTGCCAATATTTTCTGC 59.769 40.000 11.01 0.00 0.00 4.26
2560 4073 2.796032 GCCAATATTTTCTGCGTCAGGC 60.796 50.000 6.95 0.00 43.96 4.85
2568 4081 4.393155 TGCGTCAGGCTTGCCGAT 62.393 61.111 2.56 0.00 44.05 4.18
2569 4082 3.567797 GCGTCAGGCTTGCCGATC 61.568 66.667 2.56 0.20 39.11 3.69
2570 4083 3.257561 CGTCAGGCTTGCCGATCG 61.258 66.667 8.51 8.51 0.00 3.69
2578 4091 2.125310 TTGCCGATCGACCGCATT 60.125 55.556 18.66 0.00 0.00 3.56
2680 4199 2.496341 GGCCGTACTTCCGTACCC 59.504 66.667 0.00 0.00 42.38 3.69
2681 4200 2.350458 GGCCGTACTTCCGTACCCA 61.350 63.158 0.00 0.00 42.38 4.51
2682 4201 1.591183 GCCGTACTTCCGTACCCAA 59.409 57.895 0.00 0.00 42.38 4.12
2683 4202 0.037419 GCCGTACTTCCGTACCCAAA 60.037 55.000 0.00 0.00 42.38 3.28
2684 4203 1.607767 GCCGTACTTCCGTACCCAAAA 60.608 52.381 0.00 0.00 42.38 2.44
2685 4204 2.765122 CCGTACTTCCGTACCCAAAAA 58.235 47.619 0.00 0.00 42.38 1.94
2686 4205 3.337358 CCGTACTTCCGTACCCAAAAAT 58.663 45.455 0.00 0.00 42.38 1.82
2687 4206 3.125658 CCGTACTTCCGTACCCAAAAATG 59.874 47.826 0.00 0.00 42.38 2.32
2688 4207 3.425227 CGTACTTCCGTACCCAAAAATGC 60.425 47.826 0.00 0.00 42.38 3.56
2689 4208 2.871453 ACTTCCGTACCCAAAAATGCT 58.129 42.857 0.00 0.00 0.00 3.79
2690 4209 4.023726 ACTTCCGTACCCAAAAATGCTA 57.976 40.909 0.00 0.00 0.00 3.49
2691 4210 4.400120 ACTTCCGTACCCAAAAATGCTAA 58.600 39.130 0.00 0.00 0.00 3.09
2692 4211 4.828387 ACTTCCGTACCCAAAAATGCTAAA 59.172 37.500 0.00 0.00 0.00 1.85
2693 4212 4.769859 TCCGTACCCAAAAATGCTAAAC 57.230 40.909 0.00 0.00 0.00 2.01
2694 4213 4.400120 TCCGTACCCAAAAATGCTAAACT 58.600 39.130 0.00 0.00 0.00 2.66
2695 4214 4.456566 TCCGTACCCAAAAATGCTAAACTC 59.543 41.667 0.00 0.00 0.00 3.01
2696 4215 4.216687 CCGTACCCAAAAATGCTAAACTCA 59.783 41.667 0.00 0.00 0.00 3.41
2697 4216 5.151389 CGTACCCAAAAATGCTAAACTCAC 58.849 41.667 0.00 0.00 0.00 3.51
2698 4217 4.600692 ACCCAAAAATGCTAAACTCACC 57.399 40.909 0.00 0.00 0.00 4.02
2699 4218 3.005367 ACCCAAAAATGCTAAACTCACCG 59.995 43.478 0.00 0.00 0.00 4.94
2700 4219 3.254657 CCCAAAAATGCTAAACTCACCGA 59.745 43.478 0.00 0.00 0.00 4.69
2701 4220 4.226761 CCAAAAATGCTAAACTCACCGAC 58.773 43.478 0.00 0.00 0.00 4.79
2702 4221 4.261405 CCAAAAATGCTAAACTCACCGACA 60.261 41.667 0.00 0.00 0.00 4.35
2703 4222 5.460646 CAAAAATGCTAAACTCACCGACAT 58.539 37.500 0.00 0.00 0.00 3.06
2704 4223 5.705609 AAAATGCTAAACTCACCGACATT 57.294 34.783 0.00 0.00 0.00 2.71
2705 4224 5.705609 AAATGCTAAACTCACCGACATTT 57.294 34.783 0.00 0.00 32.89 2.32
2706 4225 5.705609 AATGCTAAACTCACCGACATTTT 57.294 34.783 0.00 0.00 0.00 1.82
2707 4226 6.811253 AATGCTAAACTCACCGACATTTTA 57.189 33.333 0.00 0.00 0.00 1.52
2708 4227 5.600908 TGCTAAACTCACCGACATTTTAC 57.399 39.130 0.00 0.00 0.00 2.01
2709 4228 5.302360 TGCTAAACTCACCGACATTTTACT 58.698 37.500 0.00 0.00 0.00 2.24
2710 4229 5.761234 TGCTAAACTCACCGACATTTTACTT 59.239 36.000 0.00 0.00 0.00 2.24
2711 4230 6.077838 GCTAAACTCACCGACATTTTACTTG 58.922 40.000 0.00 0.00 0.00 3.16
2712 4231 4.483476 AACTCACCGACATTTTACTTGC 57.517 40.909 0.00 0.00 0.00 4.01
2713 4232 3.740115 ACTCACCGACATTTTACTTGCT 58.260 40.909 0.00 0.00 0.00 3.91
2714 4233 4.134563 ACTCACCGACATTTTACTTGCTT 58.865 39.130 0.00 0.00 0.00 3.91
2715 4234 4.578928 ACTCACCGACATTTTACTTGCTTT 59.421 37.500 0.00 0.00 0.00 3.51
2716 4235 5.067283 ACTCACCGACATTTTACTTGCTTTT 59.933 36.000 0.00 0.00 0.00 2.27
2717 4236 6.261381 ACTCACCGACATTTTACTTGCTTTTA 59.739 34.615 0.00 0.00 0.00 1.52
2718 4237 6.432107 TCACCGACATTTTACTTGCTTTTAC 58.568 36.000 0.00 0.00 0.00 2.01
2719 4238 5.338559 CACCGACATTTTACTTGCTTTTACG 59.661 40.000 0.00 0.00 0.00 3.18
2720 4239 4.849383 CCGACATTTTACTTGCTTTTACGG 59.151 41.667 0.00 0.00 0.00 4.02
2721 4240 4.849383 CGACATTTTACTTGCTTTTACGGG 59.151 41.667 0.00 0.00 0.00 5.28
2722 4241 5.128992 ACATTTTACTTGCTTTTACGGGG 57.871 39.130 0.00 0.00 0.00 5.73
2723 4242 3.646611 TTTTACTTGCTTTTACGGGGC 57.353 42.857 0.00 0.00 0.00 5.80
2724 4243 2.273538 TTACTTGCTTTTACGGGGCA 57.726 45.000 0.00 0.00 0.00 5.36
2725 4244 2.500392 TACTTGCTTTTACGGGGCAT 57.500 45.000 0.00 0.00 35.84 4.40
2726 4245 2.500392 ACTTGCTTTTACGGGGCATA 57.500 45.000 0.00 0.00 35.84 3.14
2727 4246 2.365582 ACTTGCTTTTACGGGGCATAG 58.634 47.619 0.00 0.00 35.84 2.23
2728 4247 1.065551 CTTGCTTTTACGGGGCATAGC 59.934 52.381 0.00 0.00 35.84 2.97
2729 4248 1.092921 TGCTTTTACGGGGCATAGCG 61.093 55.000 0.00 0.00 0.00 4.26
2730 4249 1.093496 GCTTTTACGGGGCATAGCGT 61.093 55.000 0.00 0.00 0.00 5.07
2731 4250 1.807377 GCTTTTACGGGGCATAGCGTA 60.807 52.381 0.00 0.00 0.00 4.42
2732 4251 2.553086 CTTTTACGGGGCATAGCGTAA 58.447 47.619 0.00 0.00 0.00 3.18
2733 4252 2.914695 TTTACGGGGCATAGCGTAAT 57.085 45.000 0.00 0.00 0.00 1.89
2734 4253 4.309099 CTTTTACGGGGCATAGCGTAATA 58.691 43.478 0.00 0.00 0.00 0.98
2735 4254 3.581024 TTACGGGGCATAGCGTAATAG 57.419 47.619 0.00 0.00 0.00 1.73
2736 4255 0.606604 ACGGGGCATAGCGTAATAGG 59.393 55.000 0.00 0.00 0.00 2.57
2737 4256 0.892755 CGGGGCATAGCGTAATAGGA 59.107 55.000 0.00 0.00 0.00 2.94
2738 4257 1.403780 CGGGGCATAGCGTAATAGGAC 60.404 57.143 0.00 0.00 0.00 3.85
2739 4258 1.403780 GGGGCATAGCGTAATAGGACG 60.404 57.143 0.00 0.00 45.70 4.79
2740 4259 1.403780 GGGCATAGCGTAATAGGACGG 60.404 57.143 0.00 0.00 43.13 4.79
2741 4260 1.403780 GGCATAGCGTAATAGGACGGG 60.404 57.143 0.00 0.00 43.13 5.28
2742 4261 1.992170 CATAGCGTAATAGGACGGGC 58.008 55.000 0.00 0.00 43.13 6.13
2743 4262 0.524862 ATAGCGTAATAGGACGGGCG 59.475 55.000 0.00 0.00 43.13 6.13
2744 4263 0.819259 TAGCGTAATAGGACGGGCGT 60.819 55.000 0.00 0.00 43.13 5.68
2745 4264 1.947642 GCGTAATAGGACGGGCGTG 60.948 63.158 0.00 0.00 43.13 5.34
2746 4265 1.299620 CGTAATAGGACGGGCGTGG 60.300 63.158 0.00 0.00 39.19 4.94
2747 4266 1.727511 CGTAATAGGACGGGCGTGGA 61.728 60.000 0.00 0.00 39.19 4.02
2748 4267 0.677842 GTAATAGGACGGGCGTGGAT 59.322 55.000 0.00 0.00 0.00 3.41
2749 4268 0.677288 TAATAGGACGGGCGTGGATG 59.323 55.000 0.00 0.00 0.00 3.51
2750 4269 1.335132 AATAGGACGGGCGTGGATGT 61.335 55.000 0.00 0.00 0.00 3.06
2751 4270 0.468585 ATAGGACGGGCGTGGATGTA 60.469 55.000 0.00 0.00 0.00 2.29
2752 4271 1.386525 TAGGACGGGCGTGGATGTAC 61.387 60.000 0.00 0.00 0.00 2.90
2753 4272 2.718073 GGACGGGCGTGGATGTACT 61.718 63.158 0.00 0.00 0.00 2.73
2754 4273 1.518572 GACGGGCGTGGATGTACTG 60.519 63.158 0.00 0.00 0.00 2.74
2755 4274 2.221906 GACGGGCGTGGATGTACTGT 62.222 60.000 0.00 0.00 0.00 3.55
2756 4275 1.079405 CGGGCGTGGATGTACTGTT 60.079 57.895 0.00 0.00 0.00 3.16
2757 4276 0.672401 CGGGCGTGGATGTACTGTTT 60.672 55.000 0.00 0.00 0.00 2.83
2758 4277 0.802494 GGGCGTGGATGTACTGTTTG 59.198 55.000 0.00 0.00 0.00 2.93
2759 4278 1.519408 GGCGTGGATGTACTGTTTGT 58.481 50.000 0.00 0.00 0.00 2.83
2760 4279 2.613474 GGGCGTGGATGTACTGTTTGTA 60.613 50.000 0.00 0.00 0.00 2.41
2761 4280 2.671396 GGCGTGGATGTACTGTTTGTAG 59.329 50.000 0.00 0.00 0.00 2.74
2762 4281 3.323243 GCGTGGATGTACTGTTTGTAGT 58.677 45.455 0.00 0.00 34.71 2.73
2763 4282 3.122948 GCGTGGATGTACTGTTTGTAGTG 59.877 47.826 0.00 0.00 32.19 2.74
2764 4283 3.122948 CGTGGATGTACTGTTTGTAGTGC 59.877 47.826 0.00 0.00 34.39 4.40
2765 4284 4.315803 GTGGATGTACTGTTTGTAGTGCT 58.684 43.478 0.00 0.00 34.81 4.40
2766 4285 4.755123 GTGGATGTACTGTTTGTAGTGCTT 59.245 41.667 0.00 0.00 34.81 3.91
2767 4286 4.994852 TGGATGTACTGTTTGTAGTGCTTC 59.005 41.667 0.00 0.00 37.01 3.86
2768 4287 4.392138 GGATGTACTGTTTGTAGTGCTTCC 59.608 45.833 11.16 11.16 44.22 3.46
2769 4288 4.682778 TGTACTGTTTGTAGTGCTTCCT 57.317 40.909 0.00 0.00 34.81 3.36
2770 4289 5.031066 TGTACTGTTTGTAGTGCTTCCTT 57.969 39.130 0.00 0.00 34.81 3.36
2771 4290 5.433526 TGTACTGTTTGTAGTGCTTCCTTT 58.566 37.500 0.00 0.00 34.81 3.11
2772 4291 5.526111 TGTACTGTTTGTAGTGCTTCCTTTC 59.474 40.000 0.00 0.00 34.81 2.62
2773 4292 3.560068 ACTGTTTGTAGTGCTTCCTTTCG 59.440 43.478 0.00 0.00 0.00 3.46
2774 4293 2.289547 TGTTTGTAGTGCTTCCTTTCGC 59.710 45.455 0.00 0.00 0.00 4.70
2775 4294 1.519408 TTGTAGTGCTTCCTTTCGCC 58.481 50.000 0.00 0.00 0.00 5.54
2776 4295 0.669318 TGTAGTGCTTCCTTTCGCCG 60.669 55.000 0.00 0.00 0.00 6.46
2777 4296 1.079405 TAGTGCTTCCTTTCGCCGG 60.079 57.895 0.00 0.00 0.00 6.13
2778 4297 1.537814 TAGTGCTTCCTTTCGCCGGA 61.538 55.000 5.05 0.00 0.00 5.14
2779 4298 2.358247 TGCTTCCTTTCGCCGGAC 60.358 61.111 5.05 0.00 0.00 4.79
2780 4299 2.047179 GCTTCCTTTCGCCGGACT 60.047 61.111 5.05 0.00 0.00 3.85
2781 4300 1.671379 GCTTCCTTTCGCCGGACTT 60.671 57.895 5.05 0.00 0.00 3.01
2782 4301 1.235281 GCTTCCTTTCGCCGGACTTT 61.235 55.000 5.05 0.00 0.00 2.66
2783 4302 0.517316 CTTCCTTTCGCCGGACTTTG 59.483 55.000 5.05 0.00 0.00 2.77
2784 4303 0.107081 TTCCTTTCGCCGGACTTTGA 59.893 50.000 5.05 0.00 0.00 2.69
2785 4304 0.320421 TCCTTTCGCCGGACTTTGAG 60.320 55.000 5.05 0.00 0.00 3.02
2786 4305 1.497722 CTTTCGCCGGACTTTGAGC 59.502 57.895 5.05 0.00 0.00 4.26
2787 4306 1.227704 TTTCGCCGGACTTTGAGCA 60.228 52.632 5.05 0.00 0.00 4.26
2788 4307 0.605319 TTTCGCCGGACTTTGAGCAT 60.605 50.000 5.05 0.00 0.00 3.79
2789 4308 1.019278 TTCGCCGGACTTTGAGCATC 61.019 55.000 5.05 0.00 0.00 3.91
2790 4309 1.448540 CGCCGGACTTTGAGCATCT 60.449 57.895 5.05 0.00 34.92 2.90
2791 4310 0.179111 CGCCGGACTTTGAGCATCTA 60.179 55.000 5.05 0.00 34.92 1.98
2792 4311 1.291132 GCCGGACTTTGAGCATCTAC 58.709 55.000 5.05 0.00 34.92 2.59
2793 4312 1.405526 GCCGGACTTTGAGCATCTACA 60.406 52.381 5.05 0.00 34.92 2.74
2794 4313 2.935238 GCCGGACTTTGAGCATCTACAA 60.935 50.000 5.05 0.00 34.92 2.41
2795 4314 2.673368 CCGGACTTTGAGCATCTACAAC 59.327 50.000 0.00 0.00 34.92 3.32
2796 4315 2.345641 CGGACTTTGAGCATCTACAACG 59.654 50.000 0.00 0.00 34.92 4.10
2797 4316 2.673368 GGACTTTGAGCATCTACAACGG 59.327 50.000 0.00 0.00 34.92 4.44
2798 4317 2.076863 ACTTTGAGCATCTACAACGGC 58.923 47.619 0.00 0.00 34.92 5.68
2799 4318 2.076100 CTTTGAGCATCTACAACGGCA 58.924 47.619 0.00 0.00 34.92 5.69
2800 4319 2.177394 TTGAGCATCTACAACGGCAA 57.823 45.000 0.00 0.00 34.92 4.52
2801 4320 1.438651 TGAGCATCTACAACGGCAAC 58.561 50.000 0.00 0.00 34.92 4.17
2802 4321 1.001974 TGAGCATCTACAACGGCAACT 59.998 47.619 0.00 0.00 34.92 3.16
2803 4322 1.661112 GAGCATCTACAACGGCAACTC 59.339 52.381 0.00 0.00 0.00 3.01
2804 4323 1.001974 AGCATCTACAACGGCAACTCA 59.998 47.619 0.00 0.00 0.00 3.41
2805 4324 1.128692 GCATCTACAACGGCAACTCAC 59.871 52.381 0.00 0.00 0.00 3.51
2806 4325 2.412870 CATCTACAACGGCAACTCACA 58.587 47.619 0.00 0.00 0.00 3.58
2807 4326 2.605837 TCTACAACGGCAACTCACAA 57.394 45.000 0.00 0.00 0.00 3.33
2808 4327 2.907634 TCTACAACGGCAACTCACAAA 58.092 42.857 0.00 0.00 0.00 2.83
2809 4328 3.472652 TCTACAACGGCAACTCACAAAT 58.527 40.909 0.00 0.00 0.00 2.32
2810 4329 2.490328 ACAACGGCAACTCACAAATG 57.510 45.000 0.00 0.00 0.00 2.32
2811 4330 1.748493 ACAACGGCAACTCACAAATGT 59.252 42.857 0.00 0.00 0.00 2.71
2812 4331 2.118683 CAACGGCAACTCACAAATGTG 58.881 47.619 7.22 7.22 46.91 3.21
2813 4332 0.030638 ACGGCAACTCACAAATGTGC 59.969 50.000 8.67 0.00 45.25 4.57
2814 4333 0.664166 CGGCAACTCACAAATGTGCC 60.664 55.000 8.67 5.42 45.25 5.01
2815 4334 0.319813 GGCAACTCACAAATGTGCCC 60.320 55.000 8.67 1.13 45.25 5.36
2816 4335 0.319813 GCAACTCACAAATGTGCCCC 60.320 55.000 8.67 0.00 45.25 5.80
2817 4336 0.318120 CAACTCACAAATGTGCCCCC 59.682 55.000 8.67 0.00 45.25 5.40
2818 4337 0.188342 AACTCACAAATGTGCCCCCT 59.812 50.000 8.67 0.00 45.25 4.79
2819 4338 0.251341 ACTCACAAATGTGCCCCCTC 60.251 55.000 8.67 0.00 45.25 4.30
2820 4339 0.038744 CTCACAAATGTGCCCCCTCT 59.961 55.000 8.67 0.00 45.25 3.69
2821 4340 1.281867 CTCACAAATGTGCCCCCTCTA 59.718 52.381 8.67 0.00 45.25 2.43
2822 4341 1.922447 TCACAAATGTGCCCCCTCTAT 59.078 47.619 8.67 0.00 45.25 1.98
2823 4342 3.119319 TCACAAATGTGCCCCCTCTATA 58.881 45.455 8.67 0.00 45.25 1.31
2824 4343 3.721575 TCACAAATGTGCCCCCTCTATAT 59.278 43.478 8.67 0.00 45.25 0.86
2825 4344 4.167892 TCACAAATGTGCCCCCTCTATATT 59.832 41.667 8.67 0.00 45.25 1.28
2826 4345 4.895297 CACAAATGTGCCCCCTCTATATTT 59.105 41.667 0.00 0.00 39.39 1.40
2827 4346 5.010012 CACAAATGTGCCCCCTCTATATTTC 59.990 44.000 0.00 0.00 39.39 2.17
2828 4347 5.103515 ACAAATGTGCCCCCTCTATATTTCT 60.104 40.000 0.00 0.00 0.00 2.52
2829 4348 4.917906 ATGTGCCCCCTCTATATTTCTC 57.082 45.455 0.00 0.00 0.00 2.87
2830 4349 2.979678 TGTGCCCCCTCTATATTTCTCC 59.020 50.000 0.00 0.00 0.00 3.71
2831 4350 2.028020 GTGCCCCCTCTATATTTCTCCG 60.028 54.545 0.00 0.00 0.00 4.63
2832 4351 2.258109 GCCCCCTCTATATTTCTCCGT 58.742 52.381 0.00 0.00 0.00 4.69
2833 4352 2.028020 GCCCCCTCTATATTTCTCCGTG 60.028 54.545 0.00 0.00 0.00 4.94
2834 4353 2.567615 CCCCCTCTATATTTCTCCGTGG 59.432 54.545 0.00 0.00 0.00 4.94
2835 4354 3.507411 CCCCTCTATATTTCTCCGTGGA 58.493 50.000 0.00 0.00 0.00 4.02
2836 4355 3.258622 CCCCTCTATATTTCTCCGTGGAC 59.741 52.174 0.00 0.00 0.00 4.02
2837 4356 3.895656 CCCTCTATATTTCTCCGTGGACA 59.104 47.826 0.00 0.00 0.00 4.02
2838 4357 4.021894 CCCTCTATATTTCTCCGTGGACAG 60.022 50.000 0.00 0.00 0.00 3.51
2839 4358 4.551388 CTCTATATTTCTCCGTGGACAGC 58.449 47.826 0.00 0.00 0.00 4.40
2840 4359 3.958147 TCTATATTTCTCCGTGGACAGCA 59.042 43.478 0.00 0.00 0.00 4.41
2841 4360 3.627395 ATATTTCTCCGTGGACAGCAA 57.373 42.857 0.00 0.00 0.00 3.91
2842 4361 1.523758 ATTTCTCCGTGGACAGCAAC 58.476 50.000 0.00 0.00 0.00 4.17
2843 4362 0.534203 TTTCTCCGTGGACAGCAACC 60.534 55.000 0.00 0.00 0.00 3.77
2844 4363 2.709125 TTCTCCGTGGACAGCAACCG 62.709 60.000 0.00 0.00 0.00 4.44
2845 4364 4.308458 TCCGTGGACAGCAACCGG 62.308 66.667 0.00 0.00 39.98 5.28
2846 4365 4.619227 CCGTGGACAGCAACCGGT 62.619 66.667 0.00 0.00 34.10 5.28
2847 4366 3.041940 CGTGGACAGCAACCGGTC 61.042 66.667 8.04 0.00 35.73 4.79
2848 4367 2.110213 GTGGACAGCAACCGGTCA 59.890 61.111 8.04 0.00 37.82 4.02
2849 4368 1.302511 GTGGACAGCAACCGGTCAT 60.303 57.895 8.04 0.00 37.82 3.06
2850 4369 1.003839 TGGACAGCAACCGGTCATC 60.004 57.895 8.04 0.00 37.82 2.92
2851 4370 1.745489 GGACAGCAACCGGTCATCC 60.745 63.158 8.04 7.19 37.82 3.51
2852 4371 1.745489 GACAGCAACCGGTCATCCC 60.745 63.158 8.04 0.00 36.37 3.85
2853 4372 2.185310 GACAGCAACCGGTCATCCCT 62.185 60.000 8.04 0.00 36.37 4.20
2854 4373 1.746615 CAGCAACCGGTCATCCCTG 60.747 63.158 8.04 1.51 0.00 4.45
2855 4374 2.438434 GCAACCGGTCATCCCTGG 60.438 66.667 8.04 0.00 34.31 4.45
2856 4375 2.438434 CAACCGGTCATCCCTGGC 60.438 66.667 8.04 0.00 32.17 4.85
2857 4376 2.610859 AACCGGTCATCCCTGGCT 60.611 61.111 8.04 0.00 32.17 4.75
2858 4377 2.231380 AACCGGTCATCCCTGGCTT 61.231 57.895 8.04 0.00 32.17 4.35
2859 4378 2.190578 CCGGTCATCCCTGGCTTC 59.809 66.667 0.00 0.00 0.00 3.86
2860 4379 2.370445 CCGGTCATCCCTGGCTTCT 61.370 63.158 0.00 0.00 0.00 2.85
2861 4380 1.604378 CGGTCATCCCTGGCTTCTT 59.396 57.895 0.00 0.00 0.00 2.52
2862 4381 0.462759 CGGTCATCCCTGGCTTCTTC 60.463 60.000 0.00 0.00 0.00 2.87
2863 4382 0.620556 GGTCATCCCTGGCTTCTTCA 59.379 55.000 0.00 0.00 0.00 3.02
2864 4383 1.213926 GGTCATCCCTGGCTTCTTCAT 59.786 52.381 0.00 0.00 0.00 2.57
2865 4384 2.295885 GTCATCCCTGGCTTCTTCATG 58.704 52.381 0.00 0.00 0.00 3.07
2866 4385 1.918262 TCATCCCTGGCTTCTTCATGT 59.082 47.619 0.00 0.00 0.00 3.21
2867 4386 2.092753 TCATCCCTGGCTTCTTCATGTC 60.093 50.000 0.00 0.00 0.00 3.06
2868 4387 0.620556 TCCCTGGCTTCTTCATGTCC 59.379 55.000 0.00 0.00 0.00 4.02
2869 4388 0.745845 CCCTGGCTTCTTCATGTCCG 60.746 60.000 0.00 0.00 0.00 4.79
2870 4389 1.372087 CCTGGCTTCTTCATGTCCGC 61.372 60.000 0.00 0.00 0.00 5.54
2871 4390 0.674581 CTGGCTTCTTCATGTCCGCA 60.675 55.000 0.00 0.00 0.00 5.69
2872 4391 0.250684 TGGCTTCTTCATGTCCGCAA 60.251 50.000 0.00 0.00 0.00 4.85
2873 4392 0.169009 GGCTTCTTCATGTCCGCAAC 59.831 55.000 0.00 0.00 0.00 4.17
2874 4393 0.169009 GCTTCTTCATGTCCGCAACC 59.831 55.000 0.00 0.00 0.00 3.77
2875 4394 0.443869 CTTCTTCATGTCCGCAACCG 59.556 55.000 0.00 0.00 0.00 4.44
2876 4395 0.250124 TTCTTCATGTCCGCAACCGT 60.250 50.000 0.00 0.00 0.00 4.83
2877 4396 0.669318 TCTTCATGTCCGCAACCGTC 60.669 55.000 0.00 0.00 0.00 4.79
2878 4397 1.635663 CTTCATGTCCGCAACCGTCC 61.636 60.000 0.00 0.00 0.00 4.79
2879 4398 3.124921 CATGTCCGCAACCGTCCC 61.125 66.667 0.00 0.00 0.00 4.46
2880 4399 3.319198 ATGTCCGCAACCGTCCCT 61.319 61.111 0.00 0.00 0.00 4.20
2881 4400 3.310860 ATGTCCGCAACCGTCCCTC 62.311 63.158 0.00 0.00 0.00 4.30
2882 4401 3.998672 GTCCGCAACCGTCCCTCA 61.999 66.667 0.00 0.00 0.00 3.86
2883 4402 3.998672 TCCGCAACCGTCCCTCAC 61.999 66.667 0.00 0.00 0.00 3.51
2884 4403 4.308458 CCGCAACCGTCCCTCACA 62.308 66.667 0.00 0.00 0.00 3.58
2885 4404 2.280524 CGCAACCGTCCCTCACAA 60.281 61.111 0.00 0.00 0.00 3.33
2886 4405 1.890041 CGCAACCGTCCCTCACAAA 60.890 57.895 0.00 0.00 0.00 2.83
2887 4406 1.234615 CGCAACCGTCCCTCACAAAT 61.235 55.000 0.00 0.00 0.00 2.32
2888 4407 0.521735 GCAACCGTCCCTCACAAATC 59.478 55.000 0.00 0.00 0.00 2.17
2889 4408 1.165270 CAACCGTCCCTCACAAATCC 58.835 55.000 0.00 0.00 0.00 3.01
2890 4409 0.768622 AACCGTCCCTCACAAATCCA 59.231 50.000 0.00 0.00 0.00 3.41
2891 4410 0.991920 ACCGTCCCTCACAAATCCAT 59.008 50.000 0.00 0.00 0.00 3.41
2892 4411 1.340017 ACCGTCCCTCACAAATCCATG 60.340 52.381 0.00 0.00 0.00 3.66
2893 4412 0.734889 CGTCCCTCACAAATCCATGC 59.265 55.000 0.00 0.00 0.00 4.06
2894 4413 1.679944 CGTCCCTCACAAATCCATGCT 60.680 52.381 0.00 0.00 0.00 3.79
2895 4414 2.419990 CGTCCCTCACAAATCCATGCTA 60.420 50.000 0.00 0.00 0.00 3.49
2896 4415 3.745480 CGTCCCTCACAAATCCATGCTAT 60.745 47.826 0.00 0.00 0.00 2.97
2897 4416 3.817647 GTCCCTCACAAATCCATGCTATC 59.182 47.826 0.00 0.00 0.00 2.08
2898 4417 3.152341 CCCTCACAAATCCATGCTATCC 58.848 50.000 0.00 0.00 0.00 2.59
2899 4418 3.435457 CCCTCACAAATCCATGCTATCCA 60.435 47.826 0.00 0.00 0.00 3.41
2900 4419 4.404640 CCTCACAAATCCATGCTATCCAT 58.595 43.478 0.00 0.00 33.39 3.41
2908 4427 2.394545 CATGCTATCCATGCAACGTG 57.605 50.000 0.00 0.00 44.34 4.49
2909 4428 1.941975 CATGCTATCCATGCAACGTGA 59.058 47.619 0.00 0.00 44.34 4.35
2910 4429 2.330440 TGCTATCCATGCAACGTGAT 57.670 45.000 0.00 0.00 37.51 3.06
2911 4430 2.212652 TGCTATCCATGCAACGTGATC 58.787 47.619 0.00 0.00 37.51 2.92
2912 4431 2.212652 GCTATCCATGCAACGTGATCA 58.787 47.619 0.00 0.00 0.00 2.92
2913 4432 2.613595 GCTATCCATGCAACGTGATCAA 59.386 45.455 0.00 0.00 0.00 2.57
2914 4433 3.546815 GCTATCCATGCAACGTGATCAAC 60.547 47.826 0.00 0.00 0.00 3.18
2915 4434 2.183478 TCCATGCAACGTGATCAACT 57.817 45.000 0.00 0.00 0.00 3.16
2916 4435 2.503331 TCCATGCAACGTGATCAACTT 58.497 42.857 0.00 0.00 0.00 2.66
2917 4436 3.669536 TCCATGCAACGTGATCAACTTA 58.330 40.909 0.00 0.00 0.00 2.24
2918 4437 3.435327 TCCATGCAACGTGATCAACTTAC 59.565 43.478 0.00 0.00 0.00 2.34
2919 4438 3.436704 CCATGCAACGTGATCAACTTACT 59.563 43.478 0.00 0.00 0.00 2.24
2920 4439 4.083324 CCATGCAACGTGATCAACTTACTT 60.083 41.667 0.00 0.00 0.00 2.24
2921 4440 5.121611 CCATGCAACGTGATCAACTTACTTA 59.878 40.000 0.00 0.00 0.00 2.24
2922 4441 5.839262 TGCAACGTGATCAACTTACTTAG 57.161 39.130 0.00 0.00 0.00 2.18
2923 4442 5.534407 TGCAACGTGATCAACTTACTTAGA 58.466 37.500 0.00 0.00 0.00 2.10
2924 4443 6.163476 TGCAACGTGATCAACTTACTTAGAT 58.837 36.000 0.00 0.00 0.00 1.98
2925 4444 7.317390 TGCAACGTGATCAACTTACTTAGATA 58.683 34.615 0.00 0.00 0.00 1.98
2926 4445 7.488150 TGCAACGTGATCAACTTACTTAGATAG 59.512 37.037 0.00 0.00 0.00 2.08
2927 4446 7.701078 GCAACGTGATCAACTTACTTAGATAGA 59.299 37.037 0.00 0.00 0.00 1.98
2928 4447 9.569167 CAACGTGATCAACTTACTTAGATAGAA 57.431 33.333 0.00 0.00 0.00 2.10
2998 4517 9.624697 CATATATGTTGGGGATAACAAATTTCG 57.375 33.333 4.43 0.00 43.13 3.46
2999 4518 5.993748 ATGTTGGGGATAACAAATTTCGT 57.006 34.783 0.00 0.00 43.13 3.85
3000 4519 5.379732 TGTTGGGGATAACAAATTTCGTC 57.620 39.130 0.00 0.00 37.60 4.20
3001 4520 4.218852 TGTTGGGGATAACAAATTTCGTCC 59.781 41.667 0.00 0.00 37.60 4.79
3002 4521 3.011119 TGGGGATAACAAATTTCGTCCG 58.989 45.455 0.00 0.00 0.00 4.79
3003 4522 2.356695 GGGGATAACAAATTTCGTCCGG 59.643 50.000 0.00 0.00 0.00 5.14
3004 4523 3.272581 GGGATAACAAATTTCGTCCGGA 58.727 45.455 0.00 0.00 0.00 5.14
3005 4524 3.064408 GGGATAACAAATTTCGTCCGGAC 59.936 47.826 25.28 25.28 0.00 4.79
3006 4525 3.685756 GGATAACAAATTTCGTCCGGACA 59.314 43.478 32.80 17.85 0.00 4.02
3007 4526 4.436451 GGATAACAAATTTCGTCCGGACAC 60.436 45.833 32.80 9.47 0.00 3.67
3008 4527 1.956297 ACAAATTTCGTCCGGACACA 58.044 45.000 32.80 16.95 0.00 3.72
3009 4528 2.290464 ACAAATTTCGTCCGGACACAA 58.710 42.857 32.80 23.87 0.00 3.33
3010 4529 2.683867 ACAAATTTCGTCCGGACACAAA 59.316 40.909 32.80 27.83 0.00 2.83
3011 4530 3.128938 ACAAATTTCGTCCGGACACAAAA 59.871 39.130 32.80 26.53 0.00 2.44
3012 4531 4.202070 ACAAATTTCGTCCGGACACAAAAT 60.202 37.500 32.80 27.37 0.00 1.82
3013 4532 3.552604 ATTTCGTCCGGACACAAAATG 57.447 42.857 32.80 15.53 0.00 2.32
3015 4534 1.956297 TCGTCCGGACACAAAATGTT 58.044 45.000 32.80 0.00 43.56 2.71
3016 4535 1.868498 TCGTCCGGACACAAAATGTTC 59.132 47.619 32.80 2.68 43.56 3.18
3017 4536 1.600013 CGTCCGGACACAAAATGTTCA 59.400 47.619 32.80 0.00 43.56 3.18
3018 4537 2.225491 CGTCCGGACACAAAATGTTCAT 59.775 45.455 32.80 0.00 43.56 2.57
3019 4538 3.666902 CGTCCGGACACAAAATGTTCATC 60.667 47.826 32.80 1.29 43.56 2.92
3020 4539 3.252215 GTCCGGACACAAAATGTTCATCA 59.748 43.478 29.75 0.00 43.56 3.07
3021 4540 4.078537 TCCGGACACAAAATGTTCATCAT 58.921 39.130 0.00 0.00 43.56 2.45
3022 4541 4.155826 TCCGGACACAAAATGTTCATCATC 59.844 41.667 0.00 0.00 43.56 2.92
3023 4542 4.082841 CCGGACACAAAATGTTCATCATCA 60.083 41.667 0.00 0.00 43.56 3.07
3024 4543 4.853196 CGGACACAAAATGTTCATCATCAC 59.147 41.667 0.00 0.00 43.56 3.06
3025 4544 5.163513 GGACACAAAATGTTCATCATCACC 58.836 41.667 0.00 0.00 43.56 4.02
3026 4545 5.047802 GGACACAAAATGTTCATCATCACCT 60.048 40.000 0.00 0.00 43.56 4.00
3027 4546 6.150976 GGACACAAAATGTTCATCATCACCTA 59.849 38.462 0.00 0.00 43.56 3.08
3028 4547 7.149569 ACACAAAATGTTCATCATCACCTAG 57.850 36.000 0.00 0.00 38.98 3.02
3029 4548 6.151648 ACACAAAATGTTCATCATCACCTAGG 59.848 38.462 7.41 7.41 38.98 3.02
3030 4549 6.151648 CACAAAATGTTCATCATCACCTAGGT 59.848 38.462 9.21 9.21 35.48 3.08
3031 4550 7.336679 CACAAAATGTTCATCATCACCTAGGTA 59.663 37.037 15.80 0.00 35.48 3.08
3032 4551 7.336931 ACAAAATGTTCATCATCACCTAGGTAC 59.663 37.037 15.80 7.19 35.48 3.34
3033 4552 6.560003 AATGTTCATCATCACCTAGGTACA 57.440 37.500 15.80 13.11 35.48 2.90
3034 4553 6.560003 ATGTTCATCATCACCTAGGTACAA 57.440 37.500 15.80 3.50 29.76 2.41
3035 4554 6.560003 TGTTCATCATCACCTAGGTACAAT 57.440 37.500 15.80 5.94 0.00 2.71
3036 4555 7.669089 TGTTCATCATCACCTAGGTACAATA 57.331 36.000 15.80 0.00 0.00 1.90
3037 4556 8.084985 TGTTCATCATCACCTAGGTACAATAA 57.915 34.615 15.80 0.77 0.00 1.40
3038 4557 8.204160 TGTTCATCATCACCTAGGTACAATAAG 58.796 37.037 15.80 0.00 0.00 1.73
3039 4558 6.759272 TCATCATCACCTAGGTACAATAAGC 58.241 40.000 15.80 0.00 0.00 3.09
3040 4559 6.326323 TCATCATCACCTAGGTACAATAAGCA 59.674 38.462 15.80 0.00 0.00 3.91
3041 4560 6.747414 TCATCACCTAGGTACAATAAGCAT 57.253 37.500 15.80 0.00 0.00 3.79
3042 4561 7.849322 TCATCACCTAGGTACAATAAGCATA 57.151 36.000 15.80 0.00 0.00 3.14
3043 4562 7.896811 TCATCACCTAGGTACAATAAGCATAG 58.103 38.462 15.80 0.00 0.00 2.23
3044 4563 7.728532 TCATCACCTAGGTACAATAAGCATAGA 59.271 37.037 15.80 2.98 0.00 1.98
3045 4564 7.286215 TCACCTAGGTACAATAAGCATAGAC 57.714 40.000 15.80 0.00 0.00 2.59
3046 4565 6.016527 TCACCTAGGTACAATAAGCATAGACG 60.017 42.308 15.80 0.00 0.00 4.18
3047 4566 6.016527 CACCTAGGTACAATAAGCATAGACGA 60.017 42.308 15.80 0.00 0.00 4.20
3048 4567 6.720288 ACCTAGGTACAATAAGCATAGACGAT 59.280 38.462 14.41 0.00 0.00 3.73
3049 4568 7.886970 ACCTAGGTACAATAAGCATAGACGATA 59.113 37.037 14.41 0.00 0.00 2.92
3050 4569 8.399425 CCTAGGTACAATAAGCATAGACGATAG 58.601 40.741 0.00 0.00 46.19 2.08
3051 4570 7.997773 AGGTACAATAAGCATAGACGATAGA 57.002 36.000 0.00 0.00 41.38 1.98
3052 4571 8.582657 AGGTACAATAAGCATAGACGATAGAT 57.417 34.615 0.00 0.00 41.38 1.98
3053 4572 9.682465 AGGTACAATAAGCATAGACGATAGATA 57.318 33.333 0.00 0.00 41.38 1.98
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 34 2.642425 GAGGCGATCGGTCCTATGA 58.358 57.895 18.30 0.00 31.71 2.15
46 47 0.528684 GATCCTTTCCTGACGAGGCG 60.529 60.000 0.00 0.00 39.57 5.52
70 71 1.459450 TGGCGGCCTGAATAAAGTTC 58.541 50.000 21.46 0.00 0.00 3.01
83 85 2.654404 GACGACTACGATGGCGGC 60.654 66.667 0.00 0.00 43.17 6.53
84 86 2.313717 TTCGACGACTACGATGGCGG 62.314 60.000 11.63 0.00 43.17 6.13
86 88 1.779724 GATTTCGACGACTACGATGGC 59.220 52.381 0.00 0.00 42.66 4.40
87 89 3.060978 TGATTTCGACGACTACGATGG 57.939 47.619 0.00 0.00 42.66 3.51
88 90 4.202558 GTCTTGATTTCGACGACTACGATG 59.797 45.833 0.00 0.00 42.66 3.84
89 91 4.341099 GTCTTGATTTCGACGACTACGAT 58.659 43.478 0.00 0.00 42.66 3.73
90 92 3.740590 GTCTTGATTTCGACGACTACGA 58.259 45.455 0.00 0.00 42.66 3.43
99 102 4.988540 AGTTGTTCATCGTCTTGATTTCGA 59.011 37.500 0.00 0.00 34.13 3.71
104 107 7.855904 GTGTTTTAAGTTGTTCATCGTCTTGAT 59.144 33.333 0.00 0.00 38.01 2.57
117 120 5.747342 TGTAGTCTGGGTGTTTTAAGTTGT 58.253 37.500 0.00 0.00 0.00 3.32
122 125 4.581409 GCCTTTGTAGTCTGGGTGTTTTAA 59.419 41.667 0.00 0.00 0.00 1.52
132 135 9.788960 GAATTATTTTTAGGCCTTTGTAGTCTG 57.211 33.333 12.58 0.00 0.00 3.51
136 139 7.220108 GCGTGAATTATTTTTAGGCCTTTGTAG 59.780 37.037 12.58 0.00 0.00 2.74
138 141 5.867174 GCGTGAATTATTTTTAGGCCTTTGT 59.133 36.000 12.58 0.00 0.00 2.83
139 142 5.004345 CGCGTGAATTATTTTTAGGCCTTTG 59.996 40.000 12.58 0.00 0.00 2.77
140 143 5.099575 CGCGTGAATTATTTTTAGGCCTTT 58.900 37.500 12.58 0.00 0.00 3.11
142 145 3.488553 GCGCGTGAATTATTTTTAGGCCT 60.489 43.478 11.78 11.78 0.00 5.19
154 157 0.027979 CGAATCCATGCGCGTGAATT 59.972 50.000 30.68 22.94 0.00 2.17
160 163 4.596180 GCACCGAATCCATGCGCG 62.596 66.667 0.00 0.00 0.00 6.86
161 164 4.256090 GGCACCGAATCCATGCGC 62.256 66.667 0.00 0.00 40.37 6.09
179 182 4.065281 GTGGTCGACGGTGAGGGG 62.065 72.222 9.92 0.00 0.00 4.79
194 198 1.081892 CTCCGCAAATGACCTCAGTG 58.918 55.000 0.00 0.00 0.00 3.66
196 200 0.745845 CCCTCCGCAAATGACCTCAG 60.746 60.000 0.00 0.00 0.00 3.35
197 201 1.299648 CCCTCCGCAAATGACCTCA 59.700 57.895 0.00 0.00 0.00 3.86
204 208 3.338250 TGGCTCCCCTCCGCAAAT 61.338 61.111 0.00 0.00 0.00 2.32
227 231 1.508088 CAATCTTTCAGCGCCACCC 59.492 57.895 2.29 0.00 0.00 4.61
248 252 2.525381 CCCTAGCCGCCAGAGGAT 60.525 66.667 5.35 0.00 31.45 3.24
333 342 3.465296 CTGGCAAGCTAGCATGCGC 62.465 63.158 31.72 25.29 41.00 6.09
344 353 0.548031 TGGGAGGATAAGCTGGCAAG 59.452 55.000 0.00 0.00 0.00 4.01
349 358 1.967066 AGTCGATGGGAGGATAAGCTG 59.033 52.381 0.00 0.00 0.00 4.24
381 390 0.393132 TGAGACGAGTGAGATCGCCT 60.393 55.000 0.00 0.00 46.60 5.52
385 394 7.202016 AGATTAATCTGAGACGAGTGAGATC 57.798 40.000 17.26 0.00 35.42 2.75
488 738 3.761995 CGTCGAAGCACGTGCATA 58.238 55.556 39.21 19.97 45.16 3.14
508 758 3.243334 GGTTATCCAGAGGTAGTACGCAC 60.243 52.174 0.00 0.00 0.00 5.34
509 759 2.954318 GGTTATCCAGAGGTAGTACGCA 59.046 50.000 0.00 0.00 0.00 5.24
510 760 2.954318 TGGTTATCCAGAGGTAGTACGC 59.046 50.000 0.00 0.00 39.03 4.42
534 784 2.180131 CTGCTCTTCCGTTGCACAGC 62.180 60.000 0.00 0.00 32.91 4.40
537 787 0.674895 ATCCTGCTCTTCCGTTGCAC 60.675 55.000 0.00 0.00 32.91 4.57
555 805 2.093341 ACCCGACGGCAGTGTTAATAAT 60.093 45.455 8.86 0.00 0.00 1.28
556 806 1.275856 ACCCGACGGCAGTGTTAATAA 59.724 47.619 8.86 0.00 0.00 1.40
557 807 0.896923 ACCCGACGGCAGTGTTAATA 59.103 50.000 8.86 0.00 0.00 0.98
645 897 2.222729 CGGACGTTTCGGACAATCATTC 60.223 50.000 0.00 0.00 0.00 2.67
829 1130 2.485122 CGCCGATCAAAAGGTGCC 59.515 61.111 0.00 0.00 0.00 5.01
943 1262 1.519455 GGTGCTGGAACCGATCTCG 60.519 63.158 0.00 0.00 39.44 4.04
973 1300 0.944311 TCTCGAACTTGTTCTGCGGC 60.944 55.000 11.11 0.00 0.00 6.53
974 1301 1.063806 CTCTCGAACTTGTTCTGCGG 58.936 55.000 11.11 0.00 0.00 5.69
975 1302 0.436531 GCTCTCGAACTTGTTCTGCG 59.563 55.000 11.11 0.30 0.00 5.18
976 1303 1.789506 AGCTCTCGAACTTGTTCTGC 58.210 50.000 11.11 9.55 0.00 4.26
977 1304 4.427096 TCTAGCTCTCGAACTTGTTCTG 57.573 45.455 11.11 5.73 0.00 3.02
978 1305 5.455056 TTTCTAGCTCTCGAACTTGTTCT 57.545 39.130 11.11 0.00 0.00 3.01
979 1306 5.062809 CCATTTCTAGCTCTCGAACTTGTTC 59.937 44.000 0.00 3.60 0.00 3.18
980 1307 4.932200 CCATTTCTAGCTCTCGAACTTGTT 59.068 41.667 0.00 0.00 0.00 2.83
1124 1454 0.249955 TGCAGCTCGTTCATGATCCA 59.750 50.000 0.00 0.00 0.00 3.41
1125 1455 1.263484 CATGCAGCTCGTTCATGATCC 59.737 52.381 0.00 0.00 39.80 3.36
1126 1456 2.207590 TCATGCAGCTCGTTCATGATC 58.792 47.619 11.31 0.00 40.91 2.92
1128 1458 2.097680 TTCATGCAGCTCGTTCATGA 57.902 45.000 11.31 11.31 43.17 3.07
1134 1495 2.604914 CGAAACTATTCATGCAGCTCGT 59.395 45.455 0.00 0.00 35.15 4.18
1136 1497 3.933031 CACGAAACTATTCATGCAGCTC 58.067 45.455 0.00 0.00 35.15 4.09
1424 1800 1.016130 GGTAGTCGTCGTCGAGGTCA 61.016 60.000 14.08 0.00 46.96 4.02
1529 1905 1.216178 GCGCGTGAGGTACCCTTTA 59.784 57.895 8.74 0.00 31.76 1.85
1877 2253 3.982372 GAAGATCACCGCGTCGCCA 62.982 63.158 12.44 0.00 0.00 5.69
2068 2483 2.253603 GCGTAGTACGTAGTTGTTGGG 58.746 52.381 22.81 0.00 44.73 4.12
2069 2484 2.253603 GGCGTAGTACGTAGTTGTTGG 58.746 52.381 22.81 0.00 44.73 3.77
2087 2502 2.124778 GGAGAGCAGAGCAAGGGC 60.125 66.667 0.00 0.00 41.61 5.19
2106 2521 1.671054 CATTGACCGAGGCCACGTT 60.671 57.895 21.30 7.17 0.00 3.99
2120 2535 0.734889 GCCATCGTCCTCAACCATTG 59.265 55.000 0.00 0.00 0.00 2.82
2175 2590 0.474184 ACAGCAGCCAGTGGTTTAGT 59.526 50.000 11.74 0.00 33.38 2.24
2179 2594 1.394266 CCAAACAGCAGCCAGTGGTT 61.394 55.000 11.74 0.44 33.38 3.67
2190 2605 2.324860 GTTTATTCGGCACCAAACAGC 58.675 47.619 0.00 0.00 32.43 4.40
2246 2663 5.128827 TGACAAACACTCCTCCTACATATCC 59.871 44.000 0.00 0.00 0.00 2.59
2247 2664 6.222038 TGACAAACACTCCTCCTACATATC 57.778 41.667 0.00 0.00 0.00 1.63
2248 2665 6.814954 ATGACAAACACTCCTCCTACATAT 57.185 37.500 0.00 0.00 0.00 1.78
2249 2666 6.620877 AATGACAAACACTCCTCCTACATA 57.379 37.500 0.00 0.00 0.00 2.29
2250 2667 5.505181 AATGACAAACACTCCTCCTACAT 57.495 39.130 0.00 0.00 0.00 2.29
2251 2668 4.974645 AATGACAAACACTCCTCCTACA 57.025 40.909 0.00 0.00 0.00 2.74
2255 2672 3.609409 GCGAAAATGACAAACACTCCTCC 60.609 47.826 0.00 0.00 0.00 4.30
2340 2758 1.060713 GACAATCGATACGATGCCCG 58.939 55.000 0.00 0.00 46.30 6.13
2360 2778 5.827666 AGGCAGCGCGTAAATATTAAAATT 58.172 33.333 8.43 0.00 0.00 1.82
2361 2779 5.432885 AGGCAGCGCGTAAATATTAAAAT 57.567 34.783 8.43 0.00 0.00 1.82
2376 2797 2.031012 TCACACAAGGAGGCAGCG 59.969 61.111 0.00 0.00 0.00 5.18
2395 2816 3.429135 GCAGTGGTAGAAGCTGTAGTACC 60.429 52.174 0.00 6.99 36.27 3.34
2403 2824 1.079543 CAGCGCAGTGGTAGAAGCT 60.080 57.895 11.47 0.00 35.06 3.74
2427 2848 4.450122 GTGATGCTGCCACACGCG 62.450 66.667 3.53 3.53 42.08 6.01
2435 2856 2.126734 GTGTTGGCGTGATGCTGC 60.127 61.111 0.00 0.00 45.43 5.25
2438 3944 2.173382 GTCGTGTTGGCGTGATGC 59.827 61.111 0.00 0.00 45.38 3.91
2454 3960 4.742201 AGTTCGCCGCGATGCTGT 62.742 61.111 17.62 0.00 35.23 4.40
2487 3993 0.667487 CTCTTCTCGCACGCCAAAGA 60.667 55.000 0.00 0.00 0.00 2.52
2488 3994 0.667487 TCTCTTCTCGCACGCCAAAG 60.667 55.000 0.00 0.00 0.00 2.77
2498 4004 0.247460 TGGTGGCATGTCTCTTCTCG 59.753 55.000 0.00 0.00 0.00 4.04
2566 4079 2.408704 GCACTACATAATGCGGTCGATC 59.591 50.000 0.00 0.00 30.97 3.69
2567 4080 2.223947 TGCACTACATAATGCGGTCGAT 60.224 45.455 0.00 0.00 45.13 3.59
2568 4081 1.135333 TGCACTACATAATGCGGTCGA 59.865 47.619 0.00 0.00 45.13 4.20
2569 4082 1.522676 CTGCACTACATAATGCGGTCG 59.477 52.381 0.00 0.00 45.13 4.79
2680 4199 4.854399 TGTCGGTGAGTTTAGCATTTTTG 58.146 39.130 0.00 0.00 0.00 2.44
2681 4200 5.705609 ATGTCGGTGAGTTTAGCATTTTT 57.294 34.783 0.00 0.00 0.00 1.94
2682 4201 5.705609 AATGTCGGTGAGTTTAGCATTTT 57.294 34.783 0.00 0.00 0.00 1.82
2683 4202 5.705609 AAATGTCGGTGAGTTTAGCATTT 57.294 34.783 0.00 0.00 32.41 2.32
2684 4203 5.705609 AAAATGTCGGTGAGTTTAGCATT 57.294 34.783 0.00 0.00 0.00 3.56
2685 4204 5.938125 AGTAAAATGTCGGTGAGTTTAGCAT 59.062 36.000 0.00 0.00 0.00 3.79
2686 4205 5.302360 AGTAAAATGTCGGTGAGTTTAGCA 58.698 37.500 0.00 0.00 0.00 3.49
2687 4206 5.857822 AGTAAAATGTCGGTGAGTTTAGC 57.142 39.130 0.00 0.00 0.00 3.09
2688 4207 6.073222 AGCAAGTAAAATGTCGGTGAGTTTAG 60.073 38.462 0.00 0.00 0.00 1.85
2689 4208 5.761234 AGCAAGTAAAATGTCGGTGAGTTTA 59.239 36.000 0.00 0.00 0.00 2.01
2690 4209 4.578928 AGCAAGTAAAATGTCGGTGAGTTT 59.421 37.500 0.00 0.00 0.00 2.66
2691 4210 4.134563 AGCAAGTAAAATGTCGGTGAGTT 58.865 39.130 0.00 0.00 0.00 3.01
2692 4211 3.740115 AGCAAGTAAAATGTCGGTGAGT 58.260 40.909 0.00 0.00 0.00 3.41
2693 4212 4.749245 AAGCAAGTAAAATGTCGGTGAG 57.251 40.909 0.00 0.00 0.00 3.51
2694 4213 5.508200 AAAAGCAAGTAAAATGTCGGTGA 57.492 34.783 0.00 0.00 0.00 4.02
2695 4214 5.338559 CGTAAAAGCAAGTAAAATGTCGGTG 59.661 40.000 0.00 0.00 0.00 4.94
2696 4215 5.445845 CGTAAAAGCAAGTAAAATGTCGGT 58.554 37.500 0.00 0.00 0.00 4.69
2697 4216 4.849383 CCGTAAAAGCAAGTAAAATGTCGG 59.151 41.667 0.00 0.00 0.00 4.79
2698 4217 4.849383 CCCGTAAAAGCAAGTAAAATGTCG 59.151 41.667 0.00 0.00 0.00 4.35
2699 4218 5.158494 CCCCGTAAAAGCAAGTAAAATGTC 58.842 41.667 0.00 0.00 0.00 3.06
2700 4219 4.559906 GCCCCGTAAAAGCAAGTAAAATGT 60.560 41.667 0.00 0.00 0.00 2.71
2701 4220 3.924073 GCCCCGTAAAAGCAAGTAAAATG 59.076 43.478 0.00 0.00 0.00 2.32
2702 4221 3.574826 TGCCCCGTAAAAGCAAGTAAAAT 59.425 39.130 0.00 0.00 32.56 1.82
2703 4222 2.957006 TGCCCCGTAAAAGCAAGTAAAA 59.043 40.909 0.00 0.00 32.56 1.52
2704 4223 2.584236 TGCCCCGTAAAAGCAAGTAAA 58.416 42.857 0.00 0.00 32.56 2.01
2705 4224 2.273538 TGCCCCGTAAAAGCAAGTAA 57.726 45.000 0.00 0.00 32.56 2.24
2706 4225 2.500392 ATGCCCCGTAAAAGCAAGTA 57.500 45.000 0.00 0.00 40.46 2.24
2707 4226 2.365582 CTATGCCCCGTAAAAGCAAGT 58.634 47.619 0.00 0.00 40.46 3.16
2708 4227 1.065551 GCTATGCCCCGTAAAAGCAAG 59.934 52.381 0.00 0.00 40.46 4.01
2709 4228 1.099689 GCTATGCCCCGTAAAAGCAA 58.900 50.000 0.00 0.00 40.46 3.91
2710 4229 1.092921 CGCTATGCCCCGTAAAAGCA 61.093 55.000 0.00 0.00 41.50 3.91
2711 4230 1.093496 ACGCTATGCCCCGTAAAAGC 61.093 55.000 0.00 0.00 35.69 3.51
2712 4231 2.228138 TACGCTATGCCCCGTAAAAG 57.772 50.000 0.00 0.00 37.04 2.27
2713 4232 2.687700 TTACGCTATGCCCCGTAAAA 57.312 45.000 3.50 0.00 44.09 1.52
2716 4235 1.820519 CCTATTACGCTATGCCCCGTA 59.179 52.381 0.00 0.00 38.75 4.02
2717 4236 0.606604 CCTATTACGCTATGCCCCGT 59.393 55.000 0.00 0.00 41.11 5.28
2718 4237 0.892755 TCCTATTACGCTATGCCCCG 59.107 55.000 0.00 0.00 0.00 5.73
2719 4238 1.403780 CGTCCTATTACGCTATGCCCC 60.404 57.143 0.00 0.00 35.87 5.80
2720 4239 1.403780 CCGTCCTATTACGCTATGCCC 60.404 57.143 0.00 0.00 41.51 5.36
2721 4240 1.403780 CCCGTCCTATTACGCTATGCC 60.404 57.143 0.00 0.00 41.51 4.40
2722 4241 1.992170 CCCGTCCTATTACGCTATGC 58.008 55.000 0.00 0.00 41.51 3.14
2723 4242 1.731424 CGCCCGTCCTATTACGCTATG 60.731 57.143 0.00 0.00 41.51 2.23
2724 4243 0.524862 CGCCCGTCCTATTACGCTAT 59.475 55.000 0.00 0.00 41.51 2.97
2725 4244 0.819259 ACGCCCGTCCTATTACGCTA 60.819 55.000 0.00 0.00 41.51 4.26
2726 4245 2.123428 ACGCCCGTCCTATTACGCT 61.123 57.895 0.00 0.00 41.51 5.07
2727 4246 1.947642 CACGCCCGTCCTATTACGC 60.948 63.158 0.00 0.00 41.51 4.42
2728 4247 1.299620 CCACGCCCGTCCTATTACG 60.300 63.158 0.00 0.00 42.49 3.18
2729 4248 0.677842 ATCCACGCCCGTCCTATTAC 59.322 55.000 0.00 0.00 0.00 1.89
2730 4249 0.677288 CATCCACGCCCGTCCTATTA 59.323 55.000 0.00 0.00 0.00 0.98
2731 4250 1.335132 ACATCCACGCCCGTCCTATT 61.335 55.000 0.00 0.00 0.00 1.73
2732 4251 0.468585 TACATCCACGCCCGTCCTAT 60.469 55.000 0.00 0.00 0.00 2.57
2733 4252 1.076850 TACATCCACGCCCGTCCTA 60.077 57.895 0.00 0.00 0.00 2.94
2734 4253 2.363276 TACATCCACGCCCGTCCT 60.363 61.111 0.00 0.00 0.00 3.85
2735 4254 2.202837 GTACATCCACGCCCGTCC 60.203 66.667 0.00 0.00 0.00 4.79
2736 4255 1.518572 CAGTACATCCACGCCCGTC 60.519 63.158 0.00 0.00 0.00 4.79
2737 4256 1.823169 AACAGTACATCCACGCCCGT 61.823 55.000 0.00 0.00 0.00 5.28
2738 4257 0.672401 AAACAGTACATCCACGCCCG 60.672 55.000 0.00 0.00 0.00 6.13
2739 4258 0.802494 CAAACAGTACATCCACGCCC 59.198 55.000 0.00 0.00 0.00 6.13
2740 4259 1.519408 ACAAACAGTACATCCACGCC 58.481 50.000 0.00 0.00 0.00 5.68
2741 4260 3.122948 CACTACAAACAGTACATCCACGC 59.877 47.826 0.00 0.00 0.00 5.34
2742 4261 3.122948 GCACTACAAACAGTACATCCACG 59.877 47.826 0.00 0.00 0.00 4.94
2743 4262 4.315803 AGCACTACAAACAGTACATCCAC 58.684 43.478 0.00 0.00 0.00 4.02
2744 4263 4.617253 AGCACTACAAACAGTACATCCA 57.383 40.909 0.00 0.00 0.00 3.41
2745 4264 4.392138 GGAAGCACTACAAACAGTACATCC 59.608 45.833 0.00 0.00 0.00 3.51
2746 4265 5.238583 AGGAAGCACTACAAACAGTACATC 58.761 41.667 0.00 0.00 0.00 3.06
2747 4266 5.228945 AGGAAGCACTACAAACAGTACAT 57.771 39.130 0.00 0.00 0.00 2.29
2748 4267 4.682778 AGGAAGCACTACAAACAGTACA 57.317 40.909 0.00 0.00 0.00 2.90
2749 4268 5.333111 CGAAAGGAAGCACTACAAACAGTAC 60.333 44.000 0.00 0.00 0.00 2.73
2750 4269 4.748102 CGAAAGGAAGCACTACAAACAGTA 59.252 41.667 0.00 0.00 0.00 2.74
2751 4270 3.560068 CGAAAGGAAGCACTACAAACAGT 59.440 43.478 0.00 0.00 0.00 3.55
2752 4271 3.607078 GCGAAAGGAAGCACTACAAACAG 60.607 47.826 0.00 0.00 0.00 3.16
2753 4272 2.289547 GCGAAAGGAAGCACTACAAACA 59.710 45.455 0.00 0.00 0.00 2.83
2754 4273 2.350484 GGCGAAAGGAAGCACTACAAAC 60.350 50.000 0.00 0.00 34.54 2.93
2755 4274 1.877443 GGCGAAAGGAAGCACTACAAA 59.123 47.619 0.00 0.00 34.54 2.83
2756 4275 1.519408 GGCGAAAGGAAGCACTACAA 58.481 50.000 0.00 0.00 34.54 2.41
2757 4276 0.669318 CGGCGAAAGGAAGCACTACA 60.669 55.000 0.00 0.00 34.54 2.74
2758 4277 1.359459 CCGGCGAAAGGAAGCACTAC 61.359 60.000 9.30 0.00 34.54 2.73
2759 4278 1.079405 CCGGCGAAAGGAAGCACTA 60.079 57.895 9.30 0.00 34.54 2.74
2760 4279 2.358737 CCGGCGAAAGGAAGCACT 60.359 61.111 9.30 0.00 34.54 4.40
2761 4280 2.358247 TCCGGCGAAAGGAAGCAC 60.358 61.111 9.30 0.00 34.33 4.40
2762 4281 2.358247 GTCCGGCGAAAGGAAGCA 60.358 61.111 9.30 0.00 39.84 3.91
2763 4282 1.235281 AAAGTCCGGCGAAAGGAAGC 61.235 55.000 9.30 0.00 39.84 3.86
2764 4283 0.517316 CAAAGTCCGGCGAAAGGAAG 59.483 55.000 9.30 0.00 39.84 3.46
2765 4284 0.107081 TCAAAGTCCGGCGAAAGGAA 59.893 50.000 9.30 0.00 39.84 3.36
2766 4285 0.320421 CTCAAAGTCCGGCGAAAGGA 60.320 55.000 9.30 0.00 34.99 3.36
2767 4286 1.912371 GCTCAAAGTCCGGCGAAAGG 61.912 60.000 9.30 0.00 0.00 3.11
2768 4287 1.227999 TGCTCAAAGTCCGGCGAAAG 61.228 55.000 9.30 0.00 0.00 2.62
2769 4288 0.605319 ATGCTCAAAGTCCGGCGAAA 60.605 50.000 9.30 0.00 0.00 3.46
2770 4289 1.003839 ATGCTCAAAGTCCGGCGAA 60.004 52.632 9.30 0.00 0.00 4.70
2771 4290 1.447838 GATGCTCAAAGTCCGGCGA 60.448 57.895 9.30 0.00 0.00 5.54
2772 4291 0.179111 TAGATGCTCAAAGTCCGGCG 60.179 55.000 0.00 0.00 0.00 6.46
2773 4292 1.291132 GTAGATGCTCAAAGTCCGGC 58.709 55.000 0.00 0.00 0.00 6.13
2774 4293 2.672961 TGTAGATGCTCAAAGTCCGG 57.327 50.000 0.00 0.00 0.00 5.14
2775 4294 2.345641 CGTTGTAGATGCTCAAAGTCCG 59.654 50.000 0.00 0.00 0.00 4.79
2776 4295 2.673368 CCGTTGTAGATGCTCAAAGTCC 59.327 50.000 0.00 0.00 0.00 3.85
2777 4296 2.094417 GCCGTTGTAGATGCTCAAAGTC 59.906 50.000 0.00 0.00 0.00 3.01
2778 4297 2.076863 GCCGTTGTAGATGCTCAAAGT 58.923 47.619 0.00 0.00 0.00 2.66
2779 4298 2.076100 TGCCGTTGTAGATGCTCAAAG 58.924 47.619 0.00 0.00 0.00 2.77
2780 4299 2.177394 TGCCGTTGTAGATGCTCAAA 57.823 45.000 0.00 0.00 0.00 2.69
2781 4300 1.804151 GTTGCCGTTGTAGATGCTCAA 59.196 47.619 0.00 0.00 0.00 3.02
2782 4301 1.001974 AGTTGCCGTTGTAGATGCTCA 59.998 47.619 0.00 0.00 0.00 4.26
2783 4302 1.661112 GAGTTGCCGTTGTAGATGCTC 59.339 52.381 0.00 0.00 0.00 4.26
2784 4303 1.001974 TGAGTTGCCGTTGTAGATGCT 59.998 47.619 0.00 0.00 0.00 3.79
2785 4304 1.128692 GTGAGTTGCCGTTGTAGATGC 59.871 52.381 0.00 0.00 0.00 3.91
2786 4305 2.412870 TGTGAGTTGCCGTTGTAGATG 58.587 47.619 0.00 0.00 0.00 2.90
2787 4306 2.831685 TGTGAGTTGCCGTTGTAGAT 57.168 45.000 0.00 0.00 0.00 1.98
2788 4307 2.605837 TTGTGAGTTGCCGTTGTAGA 57.394 45.000 0.00 0.00 0.00 2.59
2789 4308 3.003275 ACATTTGTGAGTTGCCGTTGTAG 59.997 43.478 0.00 0.00 0.00 2.74
2790 4309 2.946329 ACATTTGTGAGTTGCCGTTGTA 59.054 40.909 0.00 0.00 0.00 2.41
2791 4310 1.748493 ACATTTGTGAGTTGCCGTTGT 59.252 42.857 0.00 0.00 0.00 3.32
2792 4311 2.490328 ACATTTGTGAGTTGCCGTTG 57.510 45.000 0.00 0.00 0.00 4.10
2804 4323 4.814224 AATATAGAGGGGGCACATTTGT 57.186 40.909 0.00 0.00 0.00 2.83
2805 4324 5.388654 AGAAATATAGAGGGGGCACATTTG 58.611 41.667 0.00 0.00 0.00 2.32
2806 4325 5.458215 GGAGAAATATAGAGGGGGCACATTT 60.458 44.000 0.00 0.00 0.00 2.32
2807 4326 4.043435 GGAGAAATATAGAGGGGGCACATT 59.957 45.833 0.00 0.00 0.00 2.71
2808 4327 3.589288 GGAGAAATATAGAGGGGGCACAT 59.411 47.826 0.00 0.00 0.00 3.21
2809 4328 2.979678 GGAGAAATATAGAGGGGGCACA 59.020 50.000 0.00 0.00 0.00 4.57
2810 4329 2.028020 CGGAGAAATATAGAGGGGGCAC 60.028 54.545 0.00 0.00 0.00 5.01
2811 4330 2.257207 CGGAGAAATATAGAGGGGGCA 58.743 52.381 0.00 0.00 0.00 5.36
2812 4331 2.028020 CACGGAGAAATATAGAGGGGGC 60.028 54.545 0.00 0.00 0.00 5.80
2813 4332 2.567615 CCACGGAGAAATATAGAGGGGG 59.432 54.545 0.00 0.00 0.00 5.40
2814 4333 3.258622 GTCCACGGAGAAATATAGAGGGG 59.741 52.174 0.00 0.00 0.00 4.79
2815 4334 3.895656 TGTCCACGGAGAAATATAGAGGG 59.104 47.826 0.00 0.00 0.00 4.30
2816 4335 4.559704 GCTGTCCACGGAGAAATATAGAGG 60.560 50.000 0.00 0.00 0.00 3.69
2817 4336 4.038042 TGCTGTCCACGGAGAAATATAGAG 59.962 45.833 0.00 0.00 0.00 2.43
2818 4337 3.958147 TGCTGTCCACGGAGAAATATAGA 59.042 43.478 0.00 0.00 0.00 1.98
2819 4338 4.322080 TGCTGTCCACGGAGAAATATAG 57.678 45.455 0.00 0.00 0.00 1.31
2820 4339 4.439057 GTTGCTGTCCACGGAGAAATATA 58.561 43.478 0.00 0.00 0.00 0.86
2821 4340 3.270877 GTTGCTGTCCACGGAGAAATAT 58.729 45.455 0.00 0.00 0.00 1.28
2822 4341 2.614481 GGTTGCTGTCCACGGAGAAATA 60.614 50.000 0.00 0.00 0.00 1.40
2823 4342 1.523758 GTTGCTGTCCACGGAGAAAT 58.476 50.000 0.00 0.00 0.00 2.17
2824 4343 0.534203 GGTTGCTGTCCACGGAGAAA 60.534 55.000 0.00 0.00 0.00 2.52
2825 4344 1.070786 GGTTGCTGTCCACGGAGAA 59.929 57.895 0.00 0.00 0.00 2.87
2826 4345 2.741092 GGTTGCTGTCCACGGAGA 59.259 61.111 0.00 0.00 0.00 3.71
2827 4346 2.738521 CGGTTGCTGTCCACGGAG 60.739 66.667 0.00 0.00 0.00 4.63
2830 4349 3.041940 GACCGGTTGCTGTCCACG 61.042 66.667 9.42 0.00 0.00 4.94
2831 4350 1.298859 GATGACCGGTTGCTGTCCAC 61.299 60.000 9.42 0.00 0.00 4.02
2832 4351 1.003839 GATGACCGGTTGCTGTCCA 60.004 57.895 9.42 0.00 0.00 4.02
2833 4352 1.745489 GGATGACCGGTTGCTGTCC 60.745 63.158 9.42 8.69 0.00 4.02
2834 4353 1.745489 GGGATGACCGGTTGCTGTC 60.745 63.158 9.42 2.74 36.97 3.51
2835 4354 2.224159 AGGGATGACCGGTTGCTGT 61.224 57.895 9.42 0.00 46.96 4.40
2836 4355 1.746615 CAGGGATGACCGGTTGCTG 60.747 63.158 9.42 0.00 46.96 4.41
2837 4356 2.671070 CAGGGATGACCGGTTGCT 59.329 61.111 9.42 0.00 46.96 3.91
2838 4357 2.438434 CCAGGGATGACCGGTTGC 60.438 66.667 9.42 0.00 46.96 4.17
2839 4358 2.438434 GCCAGGGATGACCGGTTG 60.438 66.667 9.42 0.56 46.96 3.77
2840 4359 2.198304 GAAGCCAGGGATGACCGGTT 62.198 60.000 9.42 0.00 46.96 4.44
2841 4360 2.610859 AAGCCAGGGATGACCGGT 60.611 61.111 6.92 6.92 46.96 5.28
2842 4361 1.915078 AAGAAGCCAGGGATGACCGG 61.915 60.000 0.00 0.00 46.96 5.28
2843 4362 0.462759 GAAGAAGCCAGGGATGACCG 60.463 60.000 0.00 0.00 46.96 4.79
2844 4363 0.620556 TGAAGAAGCCAGGGATGACC 59.379 55.000 0.00 0.00 40.67 4.02
2845 4364 2.295885 CATGAAGAAGCCAGGGATGAC 58.704 52.381 0.00 0.00 0.00 3.06
2846 4365 1.918262 ACATGAAGAAGCCAGGGATGA 59.082 47.619 0.00 0.00 0.00 2.92
2847 4366 2.295885 GACATGAAGAAGCCAGGGATG 58.704 52.381 0.00 0.00 0.00 3.51
2848 4367 1.213926 GGACATGAAGAAGCCAGGGAT 59.786 52.381 0.00 0.00 0.00 3.85
2849 4368 0.620556 GGACATGAAGAAGCCAGGGA 59.379 55.000 0.00 0.00 0.00 4.20
2850 4369 0.745845 CGGACATGAAGAAGCCAGGG 60.746 60.000 0.00 0.00 0.00 4.45
2851 4370 1.372087 GCGGACATGAAGAAGCCAGG 61.372 60.000 0.00 0.00 0.00 4.45
2852 4371 0.674581 TGCGGACATGAAGAAGCCAG 60.675 55.000 0.00 0.00 0.00 4.85
2853 4372 0.250684 TTGCGGACATGAAGAAGCCA 60.251 50.000 0.00 0.00 0.00 4.75
2854 4373 0.169009 GTTGCGGACATGAAGAAGCC 59.831 55.000 0.00 0.00 0.00 4.35
2855 4374 0.169009 GGTTGCGGACATGAAGAAGC 59.831 55.000 0.00 0.00 0.00 3.86
2856 4375 0.443869 CGGTTGCGGACATGAAGAAG 59.556 55.000 0.00 0.00 0.00 2.85
2857 4376 0.250124 ACGGTTGCGGACATGAAGAA 60.250 50.000 0.00 0.00 0.00 2.52
2858 4377 0.669318 GACGGTTGCGGACATGAAGA 60.669 55.000 0.00 0.00 0.00 2.87
2859 4378 1.635663 GGACGGTTGCGGACATGAAG 61.636 60.000 0.00 0.00 0.00 3.02
2860 4379 1.669760 GGACGGTTGCGGACATGAA 60.670 57.895 0.00 0.00 0.00 2.57
2861 4380 2.047655 GGACGGTTGCGGACATGA 60.048 61.111 0.00 0.00 0.00 3.07
2862 4381 3.124921 GGGACGGTTGCGGACATG 61.125 66.667 0.00 0.00 0.00 3.21
2863 4382 3.310860 GAGGGACGGTTGCGGACAT 62.311 63.158 0.00 0.00 0.00 3.06
2864 4383 3.998672 GAGGGACGGTTGCGGACA 61.999 66.667 0.00 0.00 0.00 4.02
2865 4384 3.998672 TGAGGGACGGTTGCGGAC 61.999 66.667 0.00 0.00 0.00 4.79
2866 4385 3.998672 GTGAGGGACGGTTGCGGA 61.999 66.667 0.00 0.00 0.00 5.54
2867 4386 3.818121 TTGTGAGGGACGGTTGCGG 62.818 63.158 0.00 0.00 0.00 5.69
2868 4387 1.234615 ATTTGTGAGGGACGGTTGCG 61.235 55.000 0.00 0.00 0.00 4.85
2869 4388 0.521735 GATTTGTGAGGGACGGTTGC 59.478 55.000 0.00 0.00 0.00 4.17
2870 4389 1.165270 GGATTTGTGAGGGACGGTTG 58.835 55.000 0.00 0.00 0.00 3.77
2871 4390 0.768622 TGGATTTGTGAGGGACGGTT 59.231 50.000 0.00 0.00 0.00 4.44
2872 4391 0.991920 ATGGATTTGTGAGGGACGGT 59.008 50.000 0.00 0.00 0.00 4.83
2873 4392 1.382522 CATGGATTTGTGAGGGACGG 58.617 55.000 0.00 0.00 0.00 4.79
2874 4393 0.734889 GCATGGATTTGTGAGGGACG 59.265 55.000 0.00 0.00 0.00 4.79
2875 4394 2.134789 AGCATGGATTTGTGAGGGAC 57.865 50.000 0.00 0.00 0.00 4.46
2876 4395 3.181440 GGATAGCATGGATTTGTGAGGGA 60.181 47.826 0.00 0.00 0.00 4.20
2877 4396 3.152341 GGATAGCATGGATTTGTGAGGG 58.848 50.000 0.00 0.00 0.00 4.30
2878 4397 3.824133 TGGATAGCATGGATTTGTGAGG 58.176 45.455 0.00 0.00 0.00 3.86
2879 4398 4.321008 GCATGGATAGCATGGATTTGTGAG 60.321 45.833 0.00 0.00 0.00 3.51
2880 4399 3.570975 GCATGGATAGCATGGATTTGTGA 59.429 43.478 0.00 0.00 0.00 3.58
2881 4400 3.319689 TGCATGGATAGCATGGATTTGTG 59.680 43.478 0.00 0.00 37.02 3.33
2882 4401 3.568443 TGCATGGATAGCATGGATTTGT 58.432 40.909 0.00 0.00 37.02 2.83
2883 4402 4.304110 GTTGCATGGATAGCATGGATTTG 58.696 43.478 0.00 0.00 42.33 2.32
2884 4403 3.005050 CGTTGCATGGATAGCATGGATTT 59.995 43.478 0.00 0.00 42.33 2.17
2885 4404 2.555325 CGTTGCATGGATAGCATGGATT 59.445 45.455 0.00 0.00 42.33 3.01
2886 4405 2.156917 CGTTGCATGGATAGCATGGAT 58.843 47.619 0.00 0.00 42.33 3.41
2887 4406 1.134128 ACGTTGCATGGATAGCATGGA 60.134 47.619 0.00 0.00 42.33 3.41
2888 4407 1.002142 CACGTTGCATGGATAGCATGG 60.002 52.381 0.00 0.00 42.33 3.66
2889 4408 1.941975 TCACGTTGCATGGATAGCATG 59.058 47.619 0.00 0.00 42.33 4.06
2890 4409 2.330440 TCACGTTGCATGGATAGCAT 57.670 45.000 0.00 0.00 42.33 3.79
2891 4410 2.212652 GATCACGTTGCATGGATAGCA 58.787 47.619 0.00 0.00 40.85 3.49
2892 4411 2.212652 TGATCACGTTGCATGGATAGC 58.787 47.619 0.00 0.00 0.00 2.97
2893 4412 3.873361 AGTTGATCACGTTGCATGGATAG 59.127 43.478 0.00 0.00 0.00 2.08
2894 4413 3.872696 AGTTGATCACGTTGCATGGATA 58.127 40.909 0.00 0.00 0.00 2.59
2895 4414 2.715046 AGTTGATCACGTTGCATGGAT 58.285 42.857 0.00 0.00 0.00 3.41
2896 4415 2.183478 AGTTGATCACGTTGCATGGA 57.817 45.000 0.00 0.00 0.00 3.41
2897 4416 2.995466 AAGTTGATCACGTTGCATGG 57.005 45.000 0.00 0.00 0.00 3.66
2898 4417 4.668576 AGTAAGTTGATCACGTTGCATG 57.331 40.909 0.00 0.00 0.00 4.06
2899 4418 6.163476 TCTAAGTAAGTTGATCACGTTGCAT 58.837 36.000 0.00 0.00 0.00 3.96
2900 4419 5.534407 TCTAAGTAAGTTGATCACGTTGCA 58.466 37.500 0.00 0.00 0.00 4.08
2901 4420 6.648725 ATCTAAGTAAGTTGATCACGTTGC 57.351 37.500 0.00 0.00 0.00 4.17
2902 4421 9.569167 TTCTATCTAAGTAAGTTGATCACGTTG 57.431 33.333 0.00 0.00 0.00 4.10
2972 4491 9.624697 CGAAATTTGTTATCCCCAACATATATG 57.375 33.333 11.29 11.29 38.18 1.78
2973 4492 9.362151 ACGAAATTTGTTATCCCCAACATATAT 57.638 29.630 0.00 0.00 38.18 0.86
2974 4493 8.754991 ACGAAATTTGTTATCCCCAACATATA 57.245 30.769 0.00 0.00 38.18 0.86
2975 4494 7.201875 GGACGAAATTTGTTATCCCCAACATAT 60.202 37.037 0.00 0.00 38.18 1.78
2976 4495 6.095720 GGACGAAATTTGTTATCCCCAACATA 59.904 38.462 0.00 0.00 38.18 2.29
2977 4496 5.105513 GGACGAAATTTGTTATCCCCAACAT 60.106 40.000 0.00 0.00 38.18 2.71
2978 4497 4.218852 GGACGAAATTTGTTATCCCCAACA 59.781 41.667 0.00 0.00 36.65 3.33
2979 4498 4.673320 CGGACGAAATTTGTTATCCCCAAC 60.673 45.833 0.00 0.00 0.00 3.77
2980 4499 3.440872 CGGACGAAATTTGTTATCCCCAA 59.559 43.478 0.00 0.00 0.00 4.12
2981 4500 3.011119 CGGACGAAATTTGTTATCCCCA 58.989 45.455 0.00 0.00 0.00 4.96
2982 4501 2.356695 CCGGACGAAATTTGTTATCCCC 59.643 50.000 0.00 0.00 0.00 4.81
2983 4502 3.064408 GTCCGGACGAAATTTGTTATCCC 59.936 47.826 20.85 0.00 0.00 3.85
2984 4503 3.685756 TGTCCGGACGAAATTTGTTATCC 59.314 43.478 28.70 0.11 0.00 2.59
2985 4504 4.152759 TGTGTCCGGACGAAATTTGTTATC 59.847 41.667 28.70 0.81 0.00 1.75
2986 4505 4.066490 TGTGTCCGGACGAAATTTGTTAT 58.934 39.130 28.70 0.00 0.00 1.89
2987 4506 3.464907 TGTGTCCGGACGAAATTTGTTA 58.535 40.909 28.70 4.91 0.00 2.41
2988 4507 2.290464 TGTGTCCGGACGAAATTTGTT 58.710 42.857 28.70 0.00 0.00 2.83
2989 4508 1.956297 TGTGTCCGGACGAAATTTGT 58.044 45.000 28.70 0.00 0.00 2.83
2990 4509 3.341857 TTTGTGTCCGGACGAAATTTG 57.658 42.857 28.70 0.00 0.00 2.32
2991 4510 4.202070 ACATTTTGTGTCCGGACGAAATTT 60.202 37.500 28.70 21.61 37.69 1.82
2992 4511 3.316868 ACATTTTGTGTCCGGACGAAATT 59.683 39.130 28.70 20.76 37.69 1.82
2993 4512 2.882137 ACATTTTGTGTCCGGACGAAAT 59.118 40.909 28.70 26.71 39.54 2.17
2994 4513 2.290464 ACATTTTGTGTCCGGACGAAA 58.710 42.857 28.70 25.85 35.77 3.46
2995 4514 1.956297 ACATTTTGTGTCCGGACGAA 58.044 45.000 28.70 20.63 35.77 3.85
2996 4515 1.868498 GAACATTTTGTGTCCGGACGA 59.132 47.619 28.70 15.77 41.14 4.20
2997 4516 1.600013 TGAACATTTTGTGTCCGGACG 59.400 47.619 28.70 15.23 41.14 4.79
2998 4517 3.252215 TGATGAACATTTTGTGTCCGGAC 59.748 43.478 28.17 28.17 41.14 4.79
2999 4518 3.481453 TGATGAACATTTTGTGTCCGGA 58.519 40.909 0.00 0.00 41.14 5.14
3000 4519 3.913548 TGATGAACATTTTGTGTCCGG 57.086 42.857 0.00 0.00 41.14 5.14
3001 4520 4.853196 GTGATGATGAACATTTTGTGTCCG 59.147 41.667 0.00 0.00 41.14 4.79
3002 4521 5.047802 AGGTGATGATGAACATTTTGTGTCC 60.048 40.000 0.00 0.00 41.14 4.02
3003 4522 6.017400 AGGTGATGATGAACATTTTGTGTC 57.983 37.500 0.00 0.00 41.14 3.67
3004 4523 6.151648 CCTAGGTGATGATGAACATTTTGTGT 59.848 38.462 0.00 0.00 44.84 3.72
3005 4524 6.151648 ACCTAGGTGATGATGAACATTTTGTG 59.848 38.462 15.42 0.00 39.56 3.33
3006 4525 6.248433 ACCTAGGTGATGATGAACATTTTGT 58.752 36.000 15.42 0.00 39.56 2.83
3007 4526 6.764308 ACCTAGGTGATGATGAACATTTTG 57.236 37.500 15.42 0.00 39.56 2.44
3008 4527 7.402054 TGTACCTAGGTGATGATGAACATTTT 58.598 34.615 25.33 0.00 39.56 1.82
3009 4528 6.957631 TGTACCTAGGTGATGATGAACATTT 58.042 36.000 25.33 0.00 39.56 2.32
3010 4529 6.560003 TGTACCTAGGTGATGATGAACATT 57.440 37.500 25.33 0.00 39.56 2.71
3011 4530 6.560003 TTGTACCTAGGTGATGATGAACAT 57.440 37.500 25.33 0.00 42.47 2.71
3012 4531 6.560003 ATTGTACCTAGGTGATGATGAACA 57.440 37.500 25.33 14.75 0.00 3.18
3013 4532 7.171678 GCTTATTGTACCTAGGTGATGATGAAC 59.828 40.741 25.33 12.19 0.00 3.18
3014 4533 7.147567 TGCTTATTGTACCTAGGTGATGATGAA 60.148 37.037 25.33 8.67 0.00 2.57
3015 4534 6.326323 TGCTTATTGTACCTAGGTGATGATGA 59.674 38.462 25.33 8.76 0.00 2.92
3016 4535 6.524734 TGCTTATTGTACCTAGGTGATGATG 58.475 40.000 25.33 9.93 0.00 3.07
3017 4536 6.747414 TGCTTATTGTACCTAGGTGATGAT 57.253 37.500 25.33 14.39 0.00 2.45
3018 4537 6.747414 ATGCTTATTGTACCTAGGTGATGA 57.253 37.500 25.33 11.03 0.00 2.92
3019 4538 7.815068 GTCTATGCTTATTGTACCTAGGTGATG 59.185 40.741 25.33 8.33 0.00 3.07
3020 4539 7.309255 CGTCTATGCTTATTGTACCTAGGTGAT 60.309 40.741 25.33 16.71 0.00 3.06
3021 4540 6.016527 CGTCTATGCTTATTGTACCTAGGTGA 60.017 42.308 25.33 10.62 0.00 4.02
3022 4541 6.016527 TCGTCTATGCTTATTGTACCTAGGTG 60.017 42.308 25.33 6.74 0.00 4.00
3023 4542 6.066690 TCGTCTATGCTTATTGTACCTAGGT 58.933 40.000 20.57 20.57 0.00 3.08
3024 4543 6.570672 TCGTCTATGCTTATTGTACCTAGG 57.429 41.667 7.41 7.41 0.00 3.02
3025 4544 9.163899 TCTATCGTCTATGCTTATTGTACCTAG 57.836 37.037 0.00 0.00 0.00 3.02
3026 4545 9.682465 ATCTATCGTCTATGCTTATTGTACCTA 57.318 33.333 0.00 0.00 0.00 3.08
3027 4546 7.997773 TCTATCGTCTATGCTTATTGTACCT 57.002 36.000 0.00 0.00 0.00 3.08


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.