>input_sequence_61743
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-------------------------------------------------ATGGCGCCGGCTTCGTCGTTCCCGATCATCG
ACATGGGGCTGCTGGCCGGGGAGGAGCGACCCGCGGCCATGGACCTGCTGCATGACGCATGCGAGAACTGGGGATTCTTC
CAGGTGAATACGCTGGAT-------------------------------CATGAACGAGCTGCATGAATAGTTTCGTGCC
GTTCTTGTTGACTTGTACGTTGATTTTGCTTTGCTCTTGTGTG--GTGCGTGC-------------GCGCGTGCAGGTCC
TGGACCACGGCATCTCGACGGAGCTGATGGACGAGGTGGAGAAGATGACCAAGGGGCACTACAAGAGGGTGCGCGAGCAG
AGGTTCCTCGAGTTCGCGAGCAAGACGCTGCAGGACGGCGGCAGGGCGGCGGAGAACCTGGACTGGGAGAGCACCTTCTT
CGTGCGCCACCTCCCGGAGCCCAACATCGCCGAGATACCTGACCTCGACGACGACTACCGGCGGGTGATGAAGCAGTTCG
CGTCGGAGCTGGAGAGGCTGGCGGAGCGGCTGCTGGACCTGCTCTGCGAGAACCTCGGCCTCGATAAAGGGTACCTCACG
CGCGCGTTCCGGGGCTCCAACGGCGCCCCCACCTTCGGCACCAAGGTCAGCAGCTACCCGCCGTGCCCGCGCCCGGACCT
CGTCAAGGGCCTCCGCGCCCACACCGACGCCGGCGGCATCATCCTGCTCTTCCAGGACGACCGCGTCGGCGGGCTCCAGC
TGCTCAGGGGCGGCGAGTGGGTGGACGTGCCGCCCACGCGCCACTCCATCGTGGTCAACCTGGGCGACCAGCTGGAGGTG
ATCACCAACGGCAGGTACAAGAGCGTGGTCCACCGCGTGGTCGCGCAGGCCGACGGCAACCGGATGTCCATCGCCTCCTT
CTACAACCCGGCTGGCGACGCGGTGATCTTCCCGGCGCCGGCGCTGGT------GGAGGC--------------------
-GGAGGCGGCGGGCGGGGC------------GTACCCCAGGTTCGTGTTCGAGGACTACATGAAGCTGTACGTGCGCCAC
AAGTTCGAGGACAAGGAGCCCAGGTTCGAGGCCTTCAAGTCCATGGACAGCCACAGCTCCAACCTCATCGCCACCGCTTA
G-------------------------------------------------------------------------------
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-------------------------
>chr5A_1_TraesCS5A01G234300
CTTTAATAGACTGGTTTTTAAATTCATTCCTAATCATAGGACCGATCGCCTCGTCAGGAAAGGATCTGAAGAA-CTTTAT
TCAGGCCGCCATCGTAGT-CGTCGAAATCAAGACGATGAACAACTTAAAACACCCAGACTACAAAGGCCTAAAAATAATT
CACGCGCATGGATTCGGTGCCCC-CCTCACCGTCGACCACTGAGGTCATTTGCGGAGGGGAGCCACCGAAGGGTGGCGCT
GAAAGATTGGCATCCTCTGGCGGCTAGGG--GCAGCCGCCAGGCACCCAC---AGGAAAGAGCGACCGCGGGTTTGCCAA
GGCCGGTTTATAGATACTCTAGCGCATGCTAGCTTGCCAGCTTATCCTCCCATCGACTGACATTAATTTAGGCGATCTCA
CTCGTCTCAGATTAATCTTAGC----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------CGCTACGTTAGCCAGCCGTGGGGACGGACGACCGCCACCCAACATTTCGCACGACGAT
TTCAATGCCAAT-GCGATATGCACGTGCTTCGACGTAGTGCGTACTACCTCTGGATAACCACCGCTGTGCAACGGAAGAG
CAGGATTATTAACACTGCCGTCGGGTGCCCCAGGGAGCGG--CGCCGCCGCCGGGGAGCTGGAGCCAAGGTGACCAATGG
GCGATACGGCGGGGCCGAATGATTGTCCGAAACGTCCGTGGTCGCTGGATCATTGCCCAAATAATTC--------ACGAC
AGATCCACGATCCAGCACGCGGATATCCCACATGGCCTCGTCTCCGCCCGGTCAACCACCCCAGTT----AACAATCCCC
AGCACTGATACGCTCAGGTTACA-------------------------------------GTTACGGCGCGCATCAATAC
GTACACTTGGGCACCTTTTGATCGG-------------CGGCGAGCCTATAAATTCGCACCCGCCCTGCTGCATTTTCAC
TCACACTGACTACTCAAACGCACAGCAAGCGCTTGCA-----GAGAAGCCATAGAGCTGCCCGAGATCGG--------TT
CCAGCACCAGGCGCCGCAGGCCGCAGAACAA---GTTCGAGAGCTAGAAATGGCGCCGGCTTCGTCGTTCCCGATCATCG
ACATGGGGCTGCTGGCCGGGGAGGAGCGACCCGCGGCCATGGACCTGCTGCATGACGCATGCGAGAACTGGGGATTCTTC
CAGGTGAATACGCTGGAT-------------------------------CATGAACGAGCTGCATGAATAGTTTCGTGCC
GTTCTTGTTGACTTGTACGTTGATTTTGCTTTGCTCTTGTGTG--GTGCGTGC-------------GCGCGTGCAGGTCC
TGGACCACGGCATCTCGACGGAGCTGATGGACGAGGTGGAGAAGATGACCAAGGGGCACTACAAGAGGGTGCGCGAGCAG
AGGTTCCTCGAGTTCGCGAGCAAGACGCTGCAGGACGGCGGCAGGGCGGCGGAGAACCTGGACTGGGAGAGCACCTTCTT
CGTGCGCCACCTCCCGGAGCCCAACATCGCCGAGATACCTGACCTCGACGACGACTACCGGCGGGTGATGAAGCAGTTCG
CGTCGGAGCTGGAGAGGCTGGCGGAGCGGCTGCTGGACCTGCTCTGCGAGAACCTCGGCCTCGATAAAGGGTACCTCACG
CGCGCGTTCCGGGGCTCCAACGGCGCCCCCACCTTCGGCACCAAGGTCAGCAGCTACCCGCCGTGCCCGCGCCCGGACCT
CGTCAAGGGCCTCCGCGCCCACACCGACGCCGGCGGCATCATCCTGCTCTTCCAGGACGACCGCGTCGGCGGGCTCCAGC
TGCTCAGGGGCGGCGAGTGGGTGGACGTGCCGCCCACGCGCCACTCCATCGTGGTCAACCTGGGCGACCAGCTGGAGGTG
ATCACCAACGGCAGGTACAAGAGCGTGGTCCACCGCGTGGTCGCGCAGGCCGACGGCAACCGGATGTCCATCGCCTCCTT
CTACAACCCGGCTGGCGACGCGGTGATCTTCCCGGCGCCGGCGCTGGT------GGAGGC--------------------
-GGAGGCGGCGGGCGGGGC------------GTACCCCAGGTTCGTGTTCGAGGACTACATGAAGCTGTACGTGCGCCAC
AAGTTCGAGGACAAGGAGCCCAGGTTCGAGGCCTTCAAGTCCATGGACAGCCACAGCTCCAACCTCATCGCCACCGCTTA
GACCCAACAACTACGTACTACGCCCTTGCTCTGCTCTCCGAACGTGGCCTCGGTCAATGGTTGAGGACGATGGCACATAG
GATGCTCCAGAGTTTGTACGTACGTACGTACTAAACCACTGGCTGCTGTTTGGTGCCGAATAAACGAGCC--TGCTGGCT
TGTGTGCTACGCCTAGCTAGGAGGATATGTAGG-AGGAGTGTTTGTCATTTTCGCTGTGTTGTGCTGCTTCCGACCAGCA
TGAGAGCTGTACTGTTCTGTGTCTGTTCTTATTCCCACGGGCATCGTATCGATTGTCAATTTTAATATT---TACGCGCT
GCCTCCTTGTGTGAGGGTACTACAGCTTCTACCACTGCGCTGGTTGGCGCGTGTGG------------------------
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---------------------CAGCATCACGCCAACACGACAGCATCGCGGCGAACTGAATTTTTACTTGCCTCTTTGGC
GTGCGAGAAGAGACATGCCACCACTTGTGTTATTCGAGAACA-------TTGCCAATATTTTCTGCGTCAGGCTTGCCGA
TCGACCGCATTATGTAGTGCAGTGTGCACAACGGTGCCGGAATTATTAC---TCTTCCCAGAGGTGGTCACCCCTTTTCT
CGCGCTAAGAAAGCCTAGGGCCG---TACTTCCGTACCCAAAAATGCTAAACTCACCGACATTTTACTTGCTTTTACGGG
GCATAGCGTAATAGGACGGGCGTGGATGTACTGTTTGTAGTGCTTCCTTTCGCCGGACTTTGAGCATCTACAACGGCAAC
TCACAAATGTGCCCCCTCTATATTTCTCCGTGGACAGCAACCGGTCATCCCTGGCTTCTTCATGTCCGCAACCGTCCCTC
ACAAATCCATGCTATCCATGCAACGTGATCAACTTACTTAGATAGAAAAAAAAACTTACTTAGATAGAACTTGAACATAA
AAATAGCAAACATATATGTTGGGGATAACAAATTTCGTCCGGACACAAAATGTTCATCATCACCTAGGTACAATAAGCAT
AGACGATAGATAAACTAGAATATTT
>chr5A_1
CTTGAATAGACTGATTTTTAAATTCATCCCTAACCATAGGACCGATAGCCTCGTCAGGGAAGGATCTGAAAAATCTTTAT
TCAGCGCCGTCATCACCGCCGCCGAAGTCAAGACGATGAGCAACCTAAAACACCTAGATTGTGAGGGCCTAAAAATGATT
CAAACGCGTAGATTCGATGCCTCTCCTCACCTCCAACAATCGAGGTCGTCAGCGGAGGGGAGCCGCCGAA-GGTGGCGCT
GAAAGATTGGCCTCTGGCGACGGCCAGGGTTGCAGCCGCCAGGCACCCACCACAGGAAAGAACGCCCGCGGGTTTGCCAA
GTCCGATTTA--GATACTCTAACGCATGCCGGTTTGCTAGCTTATCCTCCCATCGACTGACATTAATTTTGGCAATCTCC
CTCATCTCAGATTAATCTTAGACTACCCACAATGAAAGTAACATAGGTAGTAACATCACACATATCTAGATAAAAATAGA
TGATGTGGCAAGCAATAAATGAAGAAAGAGAGTCATGTTGTAACATAACTAGTTACTACTAGTATGAGTAACATCACACA
TATCAAGGCAAGATGAGTCTATAGCATAATAAATAAAGTGTTGCATGTTACCACACATATGTTACTCCCCACTATAGAGG
TAGTAACATAGCTAGTCTTACTCGCTACGTTAGCCAGCCGTGGGGACGGACGACCGCCACCCAACATTTCGCATGATGA-
TTCAATGCCAATGGCGACATGCACGTGCTTCGACATA---CGTACTACCTCTGGATAACCATCACTATGCAACGGAAGAG
CAGG---ATTAACACTGTCGTCGGGTGCCCCAGGGAGCGGGCCGCCGCCGCTGGGGAGCTGGAGCCAAGGTGACCCATGG
GCGATACGGCGGGGCCAAATGATTGTCCGAAACATCCGTGGTCTCTAGATCATTGCCCAAATAATTC--------ACAAC
AGATCCACGATCCAGCACGTGGATATCCCACATGGCCTCGTCTCCACCCGGTCAACCACCCCAGTT----AACAATCCCC
AGCACTGATACGCTCAGGTTACA-------------------------------------ATTACGGCGCACATCAATAC
GTACACTTGAGCACCTTTTGATCGG-------------CGGCGAGCCTATAAATTCGCACCCGCCCTGCTGCATTTTCAC
TCACACTGACTACTCAAACGCACAGCAAGCGCTTGCA-----GAGAAGCCATAGAGCGACCTGAGATAAG--------TT
CTAGCACTAGGCGCCGCAGC-------ACAG---GCTCGAGGGCTAGAAATGGGGCCGGCTTCGTCGTTCCCGATCATCG
ACATGGGGCTGCTGGCCGGGGAGGAGCGGCCCGCGGCCATGGACCGGCTGCATGACGCATGCGAGAACTGGGGATTCTTC
CAGGTGAATATGCAACTCCATAACTCGATATATAGTCGACAACAATT-------------TGCATGAATAGTTTTGTGCC
GTTCTTGTTGACTTGTACGTTGATTT------------------------------------------------------
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>chr5D_351
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--------------------------------------AGCTTATCCTCCCATCGACTGGCATTAACTTTGGCAATCTCA
CTCGTCTCAGATTAATCTTA------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------CTCGCTACGTTAGCCAGCCGTGGGGACGGACGACCGCCACCCAACATTTCGCACGACGAT
TTCAATGCCAATGGCGACATGCACGTGCTTCCACATA---CCACTGGAAAACC----------------------AAGAG
CGGG---AGTAACAC------CGGGTGCCACAGGGGAGGGGAGCGGGGCGGCGGCGAGTGGGAGCCGGGGTGACCAATGG
GCGATA--------CCAAATGATTGTCCGAAACGTCCGTGGTCGCTGGATTATTGTCCAAATAATTCCGTGCTGGACGAC
AGATCCACGATCCAGCACGCGGATATCCCACATGGCCCGGTCTCCGCCCGGTCAACCACCCGAGTT----ATT-----CC
AACACTGATACGCTCAGGTTACAGTTACGGTTAGCGGCAAAAAAACTGGT------TACTGTTACGGCGCGCATCAATAC
GTACACTTGAT----------TGGCGCGACCGCCCGGCCGGCGAGCCTATAAATTCGCACCCGCCCTGCTGCATTTTCAC
TCACACTGACTACTCAAACGCACAGCAAGCGCTTGCATTGCAGAGAAGCCATAGAGCAACCTGAGATCAG--------TT
CCAGCACCAGGCGCCGCAGC-------ACAAGCAGCTCGAGAGCTAGAAATGGCGCCGGCTTCGTCGTTCCCGATCATCG
ACATGGGGCTGCTGGCCGGGGAGGAGCGGCCGGCGGCGATGGACCTGCTGCATGACGCATGCGAGAACTGGGGGTTCTTC
CAGGTGAATAAGCAACTCCATAACTCGAT----------CAACAACT-------------TGCATGAATAGTTTCGTGCC
CTTCTTATTGAGCTGTACGTTGATTTTGCTCTGCTCTTGTGGTGCGTGCGATC-------------GTGCGAGCAGGTCC
TGGACCACGGCATCTCCACGGAGCTGATGGACGAGGTGGAGAAGATGACCAAGGAGCACTACAAGAGGGTGCGCGAGCAG
AGGTTCCTCGAGTTCGCCAGCAAGACGCTGGAGGACGGCGGCAGGGCGGCGGAGAACCTGGACTGGGAGAGCACCTTCTT
CGTGCGCCACCTCCCGGAGCCCAACATCGCCGAGATACCCGACCTCGACGAGGAGTACAGGCGGGTGATGAAGCAGTTCG
CGGCGGAGCTGGAGAGGCTGGCGGAGCGGCTGCTGGACCTGCTCTGCGAGAACCTCGGCCTCGAGAAGGGGTACCTCACG
CGGGCGTTCCGGGGCTCCAAGGGCGTCCCCACCTTCGGCACCAAGGTCAGCAGCTACCCTCCCTGCCCGCGCCCCGACCT
CGTGAAGGGCCTCCGCGCCCACACCGACGCCGGCGGCATCATCCTGCTCTTCCAGGACGACCGCGTCGGCGGGCTCCAGC
TGCTCAGGGACGGCGAGTGGGTGGACGTGCCGCCCACGCGCCACTCCATCGTCGTCAACCTGGGCGACCAGCTGGAGGTG
ATCACCAACGGCCGGTACAAGAGCGTGCTCCACCGCGTGGTCGCGCAGGCCGACGGCAACCGGATGTCCATCGCCTCCTT
CTACAACCCGGCCAGCGACGCGGTGATCTTCCCGGCGCCGGCGCTGG------CGGAGGC--------------------
-GGAGGCGGCCGGCGGGGC------------GTACCCCAGGTTCGTGTTCGAGGACTACATGAAGCTGTACGTGCGCCAC
AAGTTCGAGGACAAGGAGCCCAGGTTCGAGGCCTTCAAGTCCATGGAGAGCCAGAGCACCAAGCTCATCGCCACCGCTTA
GAAGCAAC---------------CCTTGCTCTGCTCTCCGTACGTGGCCTCGGTTAATGGTTGAGGACGATGGCACATAG
GATGCTCCAGAGTTCGTACGTACGTACGTGCTAGACCACTGGCTACTGTTTGGTGCCGAATAAACGAGCCTGTGCTGGCT
TGTGTGCTACGCCTAGCTAGGATCTGTAGTAAGTAGGAGTGTTTGTCATTTTCGCTGTGTTGTGCTGCTTCCGACCAGCA
TGAGAGCTGTATTGTTCTGTGTCTGTTCTTATTCCCAGGGGCATCGTATCGGTTGTCTCTTTTAATATGTACTACGTGCT
GCCTCCTTGTGTGAGAGTACTACCGCTTCTATGAGTGTTGCCAACTTG--------------------------------
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--------------------CCACCATCACGCCAACACGGCAGCATCGCAGCGAGCTGAACT------------------
---------------TGCCACCATTTGTGTTATTCGCGCAGAACATGCCTTGCCAATATTTCCCGGGTCAGGTTTGCCCC
---ACCGCATAATGTAGTTCAGTGTGCACAACGGTGCCGGAATTATTAC---TCTTCCCAGAAGTGGTCACCACTTTTCT
CGCGCTAAGAAAGCCTAGGGCCGTAGTACTTCCGTACC------------------------------------------
--------------------------------------------------------------------------------
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-------------------------
>chr5B_697
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---------------------------------------------------------------------------ACGAC
AGATCCACGATCCAGCACGCGGATATCCCACATGGCCTGGTCTCCGCCCGGTCAACCACCCGAGTTAATAATT-----CC
AACACTGATACGCTCAGGTTACAGTTACGGTTAGCCGCAAAAAAAGAGAGGTTACATACAGTTACGGCGCGCATCAATAC
GTACACTTGAGCACCTTTTGATGGCGCGACCGCCCGGCCGGCGAGCCTATAAATTCGCACCCGCCCTGCTGCATTTTCAC
TCACACTGACTACTCAAACACGCAGCAAGCGCTTGCA-----GAGAAGCCATAAAGCAACCTGAGATCAGTTCCAGGCTT
CCAGCACCAGGCGCCGCAGC-------ACAAG---TTCGAGAGCTAGAAATGGCGCCGGCTTCGTCCTTCCCGATCATCG
ACATGGGGCTGCTGGCCGGGGAGGAGAGGCCCGTGGCGATGGACCTGCTGCATGACGCATGCGTGAACTGGGGATTCTTC
CAGGTGAATATGCAACTCCATAACTCAAT----------CAACAACTTGCATGACCAAGCTGCATGAATAGTTTCATGCC
GTTCTTTTCAAGTTGTACGCTGATTTTGCTTTGCTCTTGTG--------GTGC-------------GCGCGTGCAGGTTC
TGGACCACGGCATCTCAACGGAGCTGATGGACGAGGTGGAGAAGATGACCAAGGAGCACTACAAGAGGGTGCGCGAGCAG
AGGTTCCTCGAGTTCGCCAGCAAGACGCTGGAGGGCGGCGGCAGGGCGGCGGAGAACCTGGACTGGGAGAGCACCTTCTT
CGTGCGCCACCTCCCGGAGGCCAACATCGCCGAGATACCCGACCTCGACGACGACTACAGGCGGGTGATGAAGCAGTTCG
CGGCGGAGCTGGAGAGGCTGGCGGAGCGGCTGCTGGACCTGCTCTGCGAGAACCTCGGCCTGGAGAAGGGGTACCTCACG
CGGGCGTTCCGGGGCTCCAAGGGCGTCCCCACCTTCGGCACCAAGGTCAGCAGCTACCCGCCGTGCCCGCGCCCGGACCT
CGTCAAGGGCCTCCGCGCGCACACCGACGCCGGCGGCATCATCCTGCTCTTCCAGGACGACTGCGTCGGCGGGCTCCAGC
TCCTCAAGGACGGCGAGTGGGTGGACGTGCCGCCCACGCGCCACTCCATCGTCGTCAACCTGGGCGACCAGCTGGAGGTG
ATCACCAACGGCAGGTACAAGAGCGTGCTCCACCGCGTGGTCGCGCAGGCCGACGGCAACCGGATGTCCATCGCCTCCTT
CTACAACCCGGCCAGCGACGCGGTCATCTTCCCGGCGCCGGCGCTGG------CGGAGG---------------------
------CGGCCGGCGGTGC------------GTACCCCAGGTTCGTGTTCGAGGACTACATGAAGCTGTACGTGCGCCAC
AAGTTCGATGACAAGGAGCCCAGGTTCGAGGCCTTCAAGTCCATGGAGAGCCAGAGCACCAAGCTCATCGCCACCGCTTG
ACAACAACAACCACGG--TACTCCGTTGCTCTGCTCTCCGTACGTGGCCTCGGTTATGGTC-GAGGACGATAGCACATAG
GATGCTTGAGAGTTCGTACGTCTAG------------------TACTGTTTGGTGCCGAATAAACGAGCCTGCTGGC---
TGTGTGCTACGCCTAGCTAGGATATGTAGTA----GGAGTGTTTGTCATTTTCGCTGTGTTGTGCTGCTTCCGACCAGCA
TGAGAGCTGTACTGTTCTGTGCCTGTTCTTATTCCCAGGGGCATCGTATCGATTGTCTCTTTTAATATT---TACGTGCT
GCCTCCTTGTGTGAGAGTACACAGCTCTTCATACTTGACAGGGTGTTAGGGCATCTCCAGCCGTTCGGCCCCCAGGGCGC
CTAAATAGAGCGGCCTTGGGGCGTGACGGCGCTAGTTCGGCCCCTGGGGGCGACCTAGCTCCCAGTCACGCCCTCACGCG
TCGGCCCCAGGATGCGGGAAATTTAAACTTGGTCGTTCCTGCTCCCAAAAGACGCCGCAAATCCGGCGATCGGACGTAGT
CTGGCGTTACAAAAAACAGAGCGCCGCCGCCGCAAGTTCGCGTGTGCAACGATTCACTCGGCGGGGTCGGCTCCAGGCGT
TGGCGGAGTCGGCGTGCGCGGGCTCGTCGGTGTCGGAGCTGCTTCGGTGCTGGGCTGCGTCGGCGCGGCTTCGGCACTGC
TGGGCGGCGATGTAGAGGCGTCGTTCGGGCTTGGCGTCCGTGTGGTCGTGGGCGTCGTCGGCGTTGCCGTCGGCAGCTCG
TTTAGGATGAGGCCGCGCTGCACCAGGTACCACGCCTTGAGCTTCTCGTCGTTGCTCTGGAGCATGTCCGCCCCGCCCAT
CAGAAAAGCCATGTCGGTGTTCCTCTTCTTCGCGGCGACGTTCGTCCGAAGCAGGTCGAACTTGATGGCGTTGTTCTTCA
TTAGCGACGACCACCGCGCCTCGGTCTTCTCTTCGCGTAGGACGGCCCGGGCCTGGGCGTCGGCGAGGCAATGCTCGATG
GACTCCTGCACTCGCGCGGTTGCCGCGTCAGCGTTTTTCCCCTTCTTTGCCAATTTGTGGCCGCCCGGCCGCCCCTCTGA
CGCGCCCGGAGTCGTCGCGTCCGGCGAGCGGGAGGGGGTTTGGCGGGAGAAAGGGAGAGAATGGCGAGAGAAAGGCGAGC
GAGCGGGAGAGATGCGAGGGAAAAGCGTCAAGAAACGGCGGGAAAAGGCCCTCGGGTCGCCTTCAGGGCGGGCCCACGCG
CCTTTTTCGCTTGTGCCGGCTCCCCAAGCGCCGGGTTCGGCCTGGATCCGCCGACACCAGTTTTGACCCGAGCCGGAGAA
AAACGGACTTCTGGGGGCGCGACTGGGGCTTTTTTTTGGCGCTAGCGCGGCAAAATCACCTGGGAAGGGCCTGTTGGGGG
CGCGGCTGGAGATACCCTTACCACCATCACGCCAACACGGCAGCATGGCGGCGAACTGAACTTTTACTTGCCGTTTTGGC
GTGGGAGAAGAGACATGCCACCACTTGTGTTATTCGAGAACA-------TTGCCAATAGTTTCTGTGTCAGGTTTGCCCG
---GCCGCATAATGTAGTGCAGTGTGCATACCGGTGCCGGAATTATTACTCTTCTTCCCAGAAGTGGTCACCCCTTTTCT
CGCGCTA-------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------
>chr5A_1015
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---------------------------------------------------------------GTCATTCCCCATCATCG
ACATGGGTCTGCTCCGCGGGGACGAGCGGCCGGCGGCGATGAACCTTCTGCACGATGCATGCGAGAACTGGGGCTTCTTC
CAGGTGAATACAC---AGCAGTAACA--------------------TGGCATGATCTGACAGGATGAATCTCCTTGTCGA
TCTAT------------CCTTAATGCTGATCTGCTCTCTCT---------------TTTTCCGGTGGTGCGTGCAGGTCC
TGGACCACGGCATCTCGACGGAGCTGATGGACGAGGTGGAGAAGATGACCAAGGAGCACTACAAGAGGGTGCGGGAGCAG
AGGTTCCTCGAGTTCGCGAGCAAGACGCTGGAGGACGGCGGCAAGGCGGCGGAGAACCTGGACTGGGAGAGCACCTTCTT
CGTGCGCCACCTCCCGGAGCCCAACATCGCCGAGATACCCGACCTCGACGACGACTACAGGCGGGTGATGAAGCAGTTCG
CGTCGGAGCTGGAGAGGCTGGCGGAGCGGCTGCTGGACCTGCTCTGCGAGAACCTCGGCCTGGAAAAGGGGTACCTCACG
CGCGCGTTCCGTGGCTCCAAGGGCGCCCCCACCTTCGGCACCAAGGTCAGCAGCTACCCTCCCTGCCCGCGCCCGGACCT
CGTCAAGGGCCTCCGCGCCCACACCGACGCCGGCGGCATCATCCTGCTCTTCCAGGACGACCGCGTCGGCGGGCTCCAGC
TGCTCAGGGACGGCGAGTGGGTGGACGTGCCGCCCACGCGCCACTCCATCGTCGTCAACCTGGGCGACCAGCTGGAGGTG
ATCACCAACGGCAGGTACAAGAGCGTGCTCCACCGCGTGGTCGCGCAGACCGACGGCAACCGTATGTCCATCGCATCCTT
CTACAACCCGGCCAGCGACGCGGTCATCTTCCCGGCGGCGGCGCTGGTGGAGGCGGAGG---------------------
------CGGCCGGCGGGGC------------GTACCCGAGGTTCGTGTTCGAGGACTACATGAAGCTGTACGTGCGCCAC
AAGTTCGAGGACAAGGAGCCCAGGTTCGAGGCCTTCAAGTCCATGGAGACCCACAGCTCCAATCTCATCGCTACTGCATA
GA------------------------------------------------------------------------------
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>chr5D_1015
--------------------------------------------------------------------------------
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---------------------------------------------------------------GTCATTCCCGATCATCG
ACATGGGTCTGCTCCGCGGGGAGGAGCGGCCGGCGGCGATGAACCTTCTGCACGATGCATGCCAGAACTGGGGCTTCTTC
CAGGTGAATACACCACAGTAGTAATA--------------------TGGCATAATCTGACAAGATGAATCTCCTCATCGA
CCCAT------------CCTTAATGTTGATTTGCTCTCTCTCTG-------------TTTTCGGCGGTGCGTGCAGGTTC
TGGACCACGGCATCTCGACGGAGCTGATGGACGAGGTGGAGAAGATGACCAAGGAGCACTACAAGAGGGTGCGCGAGCAG
AGGTTCCTCGAGTTCGCCAGCAAGACGCTGCAGGACGGCGACAAGGCGGCGGAGAACCTGGACTGGGAGAGCACCTTCTT
CGTGCGCCACCTCCCGGAGCCCAACATCGCCGAGATACCCGACCTCGACGACGAGTACCGGCGGGTGATGAAGCAGTTCG
CGGCGGAGCTGGAGAGGCTGGCGGAGCGGCTGCTGGACCTGCTCTGCGAGAACCTCGGCCTCGAGAAAGGGTACCTCACG
CGGGCGTTCCGGGGCTCCAAGGGCGTCCCCACCTTCGGCACCAAGGTCAGCAGCTACCCGCCGTGCCCGCGCCCCGACCT
CGTCAAGGGCCTCCGCGCCCACACCGACGCCGGCGGCATCATCCTGCTCTTCCAGGACGACCGCGTCGGCGGCCTCCAGC
TGCTCAAGGACGGCGAGTGGGTGGATGTGCCGCCCACGCGCCACTCCATCGTCGTCAACCTGGGCGACCAGCTGGAGGTG
ATCACCAACGGCAGGTACAAGAGCGTGCTCCACCGCGTGGTCGCGCAGGCCGACGGCAACCGGATGTCCATCGCCTCCTT
CTACAACCCGGCCAGCGACGCGGTGATCTTCCCGGCGCCGGCGCTGG------CGGAGG---------------------
------CGGCCGGCGGGGC------------GTACCCCAGGTTCGTGTTCGAGGACTACATGAAGCTGTACGTGCGCCAC
AAGTTCGAGGACAAGGAGCCGAGGTTCGAAGCCTTCAAGTCCATGGGGAGCCAGACCTCCAACCCCATCGCTACTGCATA
GA------------------------------------------------------------------------------
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-------------------------
>chr5B_1015
--------------------------------------------------------------------------------
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---------------------------------------------------------------GTCATTCCCGATCATCG
ACATGGGTCTGCTCCGCGGGGAGGAGCGGCCCGCGGCGATGAACCTTCTGCACGATGCATGCGAGAACTGGGGCTTCTTC
CAGGTGAATACAC---AGCACTAACA--------------------TGGCATAATCTGACAGGATAAATCTCCTTATCGA
TCTAT------------CCTTAATGCTCATCTGCTCTCTCTCTCTCTCTCTCTCTCTTTTTCGGTGGTGCGTGCAGGTCC
TGGACCACGGCATCTCGACGGAGCTGATGGACAAGGTGGAGAAGATGACCAAGGAGCACTACAAGAGGGTGCGCGAGCAG
AGGTTCCTCGAGTTCGCCAGCAAGACGCTGGAGGACGGCGGCAAGGCGGCGGAGAACCTGGACTGGGAGAGCACCTTCTT
CGTGCGCCACCTCCCGGAGGCCAACATCGCCGAGATACCCGACCTCGACGAGGAGTACAGGCGGGTGATGAAGCAGTTCG
CGTCAGAGCTGGAGAAGCTGGCGGAGCGGCTGCTCGACCTGCTCTGTGAGAACCTCGGCCTCGAGAAAGGGTACCTCACG
CGGGCCTTCCGTGGCTCCAAGGGCGCCCCCACCTTCGGCACCAAGGTCAGCAGCTACCCGCCGTGCCCGCGGCCCGACCT
CGTCAAGGGCCTCCGCGCCCACACCGACGCGGGCGGCATCATCCTGCTCTTCCAGGACGACCGCGTCGGCGGGCTCCAGC
TGCTCAAGGACGGCGAGTGGGTGGACGTGCCGCCCACGCGCCACTCCATCGTCGTCAACCTGGGCGACCAGCTGGAGGTG
ATCACCAACGGCAGGTACAAGAGCGTGCTCCACCGCGTGGTCGCGCAGACCGACGGCAACCGTATGTCCATCGCATCCTT
CTACAACCCTGGCAGCGACGCCGTCATCTTCCCGGCGCCGGCGCT------GGCGGAGG---------------------
------CGGCTGGCGGGGC------------GTACCCCAGGTTCGTGTTCGAGGACTACATGAAGCTGTACGTGCGCCAC
AAGTTCGAGGACAAGGAACCCAGGTTCGAGGCCTTCAAGTCCATGGAGAGCCAGAGCTCCAACCTCATCGCTACTGCATA
GA------------------------------------------------------------------------------
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-------------------------
>chr6B_1450
--------------------------------------------------------------------------------
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----------------------------------------------------------------GTGATGAAGGAATTCG
CGTCCGAGATCGAGAAGCTGGCGGAGAAGGTGCTGGACCTGCTGTGCGAGAACCTGGGTCTGGAGCCGGGCTACCTGAAG
CGGGCGTTCGCCGGTTCCAGGGG---CCCGACGTTCGGCACCAAGGTCAGCAGCTACCCGCCGTGCCCGCGGCCGGACCT
GGTGGACGGCCTCCGCGCGCACACGGACGCCGGCGGCGTGATCCTGCTGTTTCAGGACGACCAGGTCAGCGGGCTGCAGC
TGCTCAAGGACGGGGCCTGGGTGGACGTGCCGCCCATGCGCCACGCCATCGTCGTCAACATCGGCGACCAGCTGGAGGTG
ATCACCAACGGGCGGTACAAGAGCGTGATGCACCGCGTGCTCACCCGCCACGACGGCAACCGCATGTCCATCGCCTCCTT
CTACAACCCCGGCGCCGACGCCGTCATATTCCCGGCCCCGGCGCT------CGTGGGCGCTGCCGACGCTGCTGAGAGGA
ACGAGGGCGAGGAGGGCAC------CGCCGTGTACCCAAGGTTCGTGTTCGAGGACTACATGAACCTGTACGTGCGCCAC
AAGTTCGAGGCCAAGGAGCCACGGTTCAAGGCCATGAAG-----------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-------------------------
>chr6A_1450
--------------------------------------------------------------------------------
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----------------------------------------------------------------GTGATGAAGGAATTCG
CGGCGGAGATCGAGAAGCTGGCGGAGAAGGTGCTGGACCTGCTGTGCGAGAACCTGGGCCTGGAGCAGGGCTACCTGAAG
CGAGCATTCGCCGGTTCAAGGGG---CCCGACGTTCGGCACCAAGGTGAGCAGCTACCCACCGTGCCCACGCCCCGACCT
GGTCGCCGGCCTCCGCGCGCACACCGACGCCGGCGGCGTCATCCTGCTGTTCCAGGACGACCAGGTGAGCGGGCTCCAGC
TCCTCAAGGATGGAGCATGGGTGGACGTGCCGCCCATGCGCCACGCCATCGTCGTCAACATCGGCGACCAGCTGGAGGTG
ATCACCAACGGGCGGTACAAGAGCGTGATGCACCGCGTGCTCACCCGCCCCGACGGCAACCGCATGTCCCTCGCCTCCTT
CTACAACCCCGGCGCGGACGCCGTCATCTTCCCTGCCCCGGCGCT------TGTCGAGGAGCTGTC------------GG
AGGAGGAGGCGGAGCGCGCCGGGAGCGCCGTGTACCCGAGGTTCGTGTTCGAGGACTACATGAACCTGTACATGCGCCAC
AAGTTCGAGGCCAAGGAGCCGCGCTTCGAGGCCATGAAG-----------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------
>chr6A_1450
--------------------------------------------------------------------------------
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----------------------------------------------------------------GTGATGAAGGAATTCG
CGGCGGAGATCGAGAAGCTGGCGGAGAAGGTGCTGGACCTGCTGTGCGAGAACCTGGGCCTGGAGCAGGGCTACCTGAAG
CGAGCATTCGCCGGTTCAAGGGG---CCCGACGTTCGGCACCAAGGTGAGCAGCTACCCACCGTGCCCACGCCCCGACCT
GGTCGCCGGCCTCCGCGCGCACACCGACGCCGGCGGCGTCATCCTGCTGTTCCAGGACGACCAGGTGAGCGGGCTCCAGC
TCCTCAAGGATGGAGCATGGGTGGACGTGCCGCCCATGCGCCACGCCATCGTCGTCAACATCGGCGACCAGCTGGAGGTG
ATCACCAACGGGCGGTACAAGAGCGTGATGCACCGCGTGCTCACCCGCCCCGACGGCAACCGCATGTCCCTCGCCTCCTT
CTACAACCCCGGCGCGGACGCCGTCATCTTCCCTGCCCCGGCGCT------TGTCGAGGAGCTGTC------------GG
AGGAGGAGGCGGAGCGTGCCGGGAGCGCCGTGTACCCGAGGTTCGTGTTCGAGGACTACATGAACCTGTACTTGCTCCAC
AAGTTCGAGGCCAAGGAGCCGCGCTTCCAGGCCATGAAG-----------------------------------------
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-------------------------
>chr6D_1450
--------------------------------------------------------------------------------
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----------------------------------------------------------------GTGATGAAGGAATTCG
CGTCGGAGATCGAGAAGCTGGCGGAGAAGGTGCTGGACCTGCTGTGCGAGAACCTGGGTCTGGAGCAGGGCTACCTGAAG
CGGGCCTTCGCCGGGTCCAGGGG---CCCGACGTTCGGCACCAAGGTCAGCAGCTACCCGCCGTGCCCGCGGCCGGACAT
GGTGGACGGACTCCGCGCGCACACCGACGCCGGCGGCGTCATCCTGCTGTTCCAGGACGACCAGGTGAGCGGGTTGCAGC
TGCTCAAGGACGGGGCATGGGTGGACGTGCCGCCCATGCGCCACGCCATCGTCGTCAACATCGGCGACCAGCTGGAGGTG
ATCACCAACGGGCGGTACAAGAGCGTGATGCACCGCGTGCTCACCCGCCCCGACGGCAACCGCATGTCCATCGCCTCCTT
CTACAACCCCGGCGCCGACGCCATCATATTCCCGGCCCCGGCGCT------CGTGGGCGCCGCCGACGCTGCTGAGAGGA
ACGAGGGCGAGGAGGGCAC------CGCCGTGTACCCGAGGTTCGTGTTCGAGGACTACATGAACCTGTACGTGCGCTAC
AAGTTCGAGGCCAAGGAGCCACGGTTCAAGGCCATGAAG-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------
>SNPs
---S---------S-------------S-----S------------S-----------S-----------S---------
----SS-SSSSSSSSSSS---S----S------------S----S---------S---S-SSS-S-----------S---
--SS---S-S------S----S---------SS-S--S-SS------S-SS-------------S-----S---------
-----------S--SSSS-S----S------------------------------------S--S---------------
-S---S----SS---------S-------SS-S----S-------------------------------S---S------
---------------------S----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------S----------------S--SSS---------------------S-S--S-------------
----SSS----------S--------------------------------------------------------------
----------------S---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------S----------------------------------------------------------------------
---------------------------------------------------------SS--S------S-----------
-------------------SSSSSSSS-----------------------------------------------------
----------------------------S---------------------------------------------------
-------------SSS-S------------------------------------S-S-----------------------
-----------------------------------------SS-------------------------------------
------------------------------------------------------S-------------------------
--------------------------------------------------------------------------------
---------------------------------------S----------------------------------------
----------------------------------------------------------------S---------------
--------------------S-----------------------------------------------------------
--------------------------------------------------------------------------------
---------S------------------------------------------S---------------------------
---------------------------S----------------------------------------------------
------------S-------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------S--------------------------------
--SS-------S---SSS---S------------------S-------------S-------------------------
--------------S--------------S---S----------S-----------------------------------
----------------------SSSSSS---S------------------------------------------------
-------------------------------------S-------------------SS-----------------S---
---------------S-------S-------SS-S--SSSS---SSSS-S-SS-SS------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------S---------------S--------------------S-----------SS------
---S-------------------------------------------------------------S------S-----SS
SSS-------S---------------------------------------------------S-----------------
--------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSS
>forward_807
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-------------------------------------------------------------------TGCAACGGAAGAG
CAGGATT-------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------
>reverse_4004
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---CGAGAAGAGACATGCCACCA---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------
