Multiple sequence alignment - TraesCS5A01G195200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G195200 chr5A 100.000 2467 0 0 1 2467 398410149 398412615 0.000000e+00 4556
1 TraesCS5A01G195200 chr5D 86.336 1471 117 41 617 2032 301488500 301487059 0.000000e+00 1526
2 TraesCS5A01G195200 chr5D 85.851 629 73 12 1 622 396285499 396284880 0.000000e+00 654
3 TraesCS5A01G195200 chr5D 85.113 618 68 12 23 622 510828910 510828299 5.830000e-171 610
4 TraesCS5A01G195200 chr5D 83.617 647 71 20 1 622 497020363 497019727 2.130000e-160 575
5 TraesCS5A01G195200 chr5D 82.308 650 68 32 3 629 423508862 423508237 1.010000e-143 520
6 TraesCS5A01G195200 chr5B 88.181 1193 74 35 889 2032 344537092 344535918 0.000000e+00 1360
7 TraesCS5A01G195200 chr5B 92.222 900 37 10 721 1591 345855339 345854444 0.000000e+00 1243
8 TraesCS5A01G195200 chr5B 86.538 260 28 6 625 880 344537764 344537508 1.870000e-71 279
9 TraesCS5A01G195200 chr3A 87.362 633 66 5 1 622 182616608 182617237 0.000000e+00 713
10 TraesCS5A01G195200 chr7D 84.796 638 70 18 1 617 575591734 575592365 1.250000e-172 616
11 TraesCS5A01G195200 chr7D 84.932 219 32 1 2250 2467 421170874 421171092 1.150000e-53 220
12 TraesCS5A01G195200 chr7D 82.648 219 37 1 2250 2467 474355322 474355104 2.500000e-45 193
13 TraesCS5A01G195200 chr7D 83.173 208 33 2 2256 2462 142048600 142048394 3.240000e-44 189
14 TraesCS5A01G195200 chr6D 83.975 649 72 13 1 626 402888256 402887617 5.870000e-166 593
15 TraesCS5A01G195200 chr1D 83.179 648 76 17 5 629 254691057 254690420 1.660000e-156 562
16 TraesCS5A01G195200 chr1D 82.226 647 78 22 1 630 395886174 395885548 7.820000e-145 523
17 TraesCS5A01G195200 chr3D 82.188 640 88 13 1 626 564127381 564128008 6.040000e-146 527
18 TraesCS5A01G195200 chr3D 83.710 221 31 5 2250 2467 303792244 303792026 1.160000e-48 204
19 TraesCS5A01G195200 chr7B 81.818 638 86 16 1 622 720343156 720343779 2.190000e-140 508
20 TraesCS5A01G195200 chr6B 80.671 626 102 15 1 619 152018802 152019415 3.710000e-128 468
21 TraesCS5A01G195200 chr4D 80.492 651 80 28 1 622 351674633 351674001 2.890000e-124 455
22 TraesCS5A01G195200 chr4D 76.818 660 96 36 1 622 505324012 505324652 3.960000e-83 318
23 TraesCS5A01G195200 chr4D 84.343 198 27 3 2250 2443 327286742 327286939 9.000000e-45 191
24 TraesCS5A01G195200 chr2D 77.190 662 91 35 1 622 142672849 142672208 5.090000e-87 331
25 TraesCS5A01G195200 chr1A 81.337 359 48 12 276 622 34154909 34154558 8.690000e-70 274
26 TraesCS5A01G195200 chr3B 85.167 209 29 2 2250 2457 606284523 606284730 1.920000e-51 213
27 TraesCS5A01G195200 chr3B 84.236 203 31 1 2261 2462 381056768 381056566 1.940000e-46 196
28 TraesCS5A01G195200 chr1B 84.422 199 29 2 2249 2446 151568450 151568647 6.960000e-46 195
29 TraesCS5A01G195200 chr6A 83.254 209 33 2 2250 2457 609026734 609026941 9.000000e-45 191


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G195200 chr5A 398410149 398412615 2466 False 4556.0 4556 100.0000 1 2467 1 chr5A.!!$F1 2466
1 TraesCS5A01G195200 chr5D 301487059 301488500 1441 True 1526.0 1526 86.3360 617 2032 1 chr5D.!!$R1 1415
2 TraesCS5A01G195200 chr5D 396284880 396285499 619 True 654.0 654 85.8510 1 622 1 chr5D.!!$R2 621
3 TraesCS5A01G195200 chr5D 510828299 510828910 611 True 610.0 610 85.1130 23 622 1 chr5D.!!$R5 599
4 TraesCS5A01G195200 chr5D 497019727 497020363 636 True 575.0 575 83.6170 1 622 1 chr5D.!!$R4 621
5 TraesCS5A01G195200 chr5D 423508237 423508862 625 True 520.0 520 82.3080 3 629 1 chr5D.!!$R3 626
6 TraesCS5A01G195200 chr5B 345854444 345855339 895 True 1243.0 1243 92.2220 721 1591 1 chr5B.!!$R1 870
7 TraesCS5A01G195200 chr5B 344535918 344537764 1846 True 819.5 1360 87.3595 625 2032 2 chr5B.!!$R2 1407
8 TraesCS5A01G195200 chr3A 182616608 182617237 629 False 713.0 713 87.3620 1 622 1 chr3A.!!$F1 621
9 TraesCS5A01G195200 chr7D 575591734 575592365 631 False 616.0 616 84.7960 1 617 1 chr7D.!!$F2 616
10 TraesCS5A01G195200 chr6D 402887617 402888256 639 True 593.0 593 83.9750 1 626 1 chr6D.!!$R1 625
11 TraesCS5A01G195200 chr1D 254690420 254691057 637 True 562.0 562 83.1790 5 629 1 chr1D.!!$R1 624
12 TraesCS5A01G195200 chr1D 395885548 395886174 626 True 523.0 523 82.2260 1 630 1 chr1D.!!$R2 629
13 TraesCS5A01G195200 chr3D 564127381 564128008 627 False 527.0 527 82.1880 1 626 1 chr3D.!!$F1 625
14 TraesCS5A01G195200 chr7B 720343156 720343779 623 False 508.0 508 81.8180 1 622 1 chr7B.!!$F1 621
15 TraesCS5A01G195200 chr6B 152018802 152019415 613 False 468.0 468 80.6710 1 619 1 chr6B.!!$F1 618
16 TraesCS5A01G195200 chr4D 351674001 351674633 632 True 455.0 455 80.4920 1 622 1 chr4D.!!$R1 621
17 TraesCS5A01G195200 chr4D 505324012 505324652 640 False 318.0 318 76.8180 1 622 1 chr4D.!!$F2 621
18 TraesCS5A01G195200 chr2D 142672208 142672849 641 True 331.0 331 77.1900 1 622 1 chr2D.!!$R1 621

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
594 754 0.317479 AAAACGTCTGGAGAGGGTCG 59.683 55.0 0.0 0.0 34.5 4.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2230 2893 0.035176 CCTTCCAAACCCGTTCCGTA 59.965 55.0 0.0 0.0 0.0 4.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
56 57 1.856265 CTCGAAAAGCAGCCACACCC 61.856 60.000 0.00 0.00 0.00 4.61
143 147 2.439104 ATCGCTGGAGAGGGAAGGC 61.439 63.158 0.00 0.00 43.82 4.35
231 295 2.272146 GATTTGGGCTCGGGCTGA 59.728 61.111 7.48 0.00 38.73 4.26
244 311 2.870372 GCTGATGTGGCCAACGAC 59.130 61.111 7.24 0.00 0.00 4.34
246 313 1.374125 CTGATGTGGCCAACGACGA 60.374 57.895 7.24 0.00 0.00 4.20
272 347 4.545929 GGGTTTTATAGCCCGCGT 57.454 55.556 4.92 0.00 38.54 6.01
402 511 1.305381 CTCTGGGGGAAGACGAGGT 60.305 63.158 0.00 0.00 0.00 3.85
448 576 2.549633 CGGCTCTTTCGCATGAAAAT 57.450 45.000 0.00 0.00 43.21 1.82
450 578 2.159531 CGGCTCTTTCGCATGAAAATCA 60.160 45.455 0.00 0.00 43.21 2.57
530 687 1.270041 GCCCAAGCCGATGAAAAACAA 60.270 47.619 0.00 0.00 0.00 2.83
560 718 1.748493 GCATGACTGGGCCGATTTTTA 59.252 47.619 0.00 0.00 0.00 1.52
572 731 1.199097 CGATTTTTAGGCGTTGGCACT 59.801 47.619 0.00 0.00 42.47 4.40
594 754 0.317479 AAAACGTCTGGAGAGGGTCG 59.683 55.000 0.00 0.00 34.50 4.79
595 755 0.826672 AAACGTCTGGAGAGGGTCGT 60.827 55.000 0.00 0.00 34.50 4.34
596 756 1.524863 AACGTCTGGAGAGGGTCGTG 61.525 60.000 0.00 0.00 34.50 4.35
634 794 4.470602 TGGAGATGCTATAAGGAAGACGA 58.529 43.478 0.00 0.00 0.00 4.20
650 810 1.068753 CGATGCTGAGTAGGCAGGG 59.931 63.158 0.00 0.00 43.15 4.45
665 825 1.961435 GCAGGGAATGAAAGGGCATCA 60.961 52.381 0.00 0.00 0.00 3.07
753 916 4.672409 AGAAAGGACGCAACTTTTTCTTG 58.328 39.130 1.85 0.00 38.21 3.02
779 942 2.758736 TGGAAAATCCAAAATGGCCG 57.241 45.000 0.00 0.00 45.00 6.13
781 944 1.406751 GGAAAATCCAAAATGGCCGGG 60.407 52.381 2.18 0.00 37.47 5.73
796 961 2.030262 GGGCAAAAACGGCATGCA 59.970 55.556 21.36 0.00 41.80 3.96
868 1053 3.552890 GGGCTGCAAAAGAAAGAAATCGT 60.553 43.478 0.50 0.00 0.00 3.73
875 1060 6.076557 GCAAAAGAAAGAAATCGTCTCAGAG 58.923 40.000 0.00 0.00 34.56 3.35
938 1530 2.631160 ACAACACCTTGATCCGAACA 57.369 45.000 0.00 0.00 0.00 3.18
1071 1681 1.369091 CCATCGTCTTTGGAAGCCCG 61.369 60.000 0.00 0.00 36.26 6.13
1102 1715 0.862283 GCTCTAGCGAACGAACTCGG 60.862 60.000 3.88 0.00 44.95 4.63
1103 1716 0.862283 CTCTAGCGAACGAACTCGGC 60.862 60.000 3.88 0.00 44.95 5.54
1104 1717 2.202388 TAGCGAACGAACTCGGCG 60.202 61.111 0.00 0.00 44.95 6.46
1111 1724 2.278857 CGAACTCGGCGAGGGATG 60.279 66.667 36.81 21.13 33.35 3.51
1113 1726 4.162690 AACTCGGCGAGGGATGGC 62.163 66.667 36.81 0.00 33.35 4.40
1172 1785 2.429930 CGGACCTGGCCAAGTTCA 59.570 61.111 13.41 0.00 0.00 3.18
1173 1786 1.228124 CGGACCTGGCCAAGTTCAA 60.228 57.895 13.41 0.00 0.00 2.69
1509 2122 0.031178 AGGCGCAGTGAAGCTTTTTG 59.969 50.000 10.83 0.75 0.00 2.44
1531 2144 5.577835 TGCTTGATTAGTTTGTGTGTTGAC 58.422 37.500 0.00 0.00 0.00 3.18
1546 2159 4.638421 TGTGTTGACCGAGTGAAATTTTCT 59.362 37.500 10.33 0.00 0.00 2.52
1568 2184 3.947910 TTTTCTCCTTGTACCGACGAT 57.052 42.857 0.00 0.00 0.00 3.73
1615 2234 5.242393 GCCATATACTCCTCCGTAAACTGTA 59.758 44.000 0.00 0.00 0.00 2.74
1623 2242 6.817140 ACTCCTCCGTAAACTGTATTGATTTC 59.183 38.462 0.00 0.00 0.00 2.17
1627 2246 6.110707 TCCGTAAACTGTATTGATTTCCTCC 58.889 40.000 0.00 0.00 0.00 4.30
1637 2256 6.599244 TGTATTGATTTCCTCCTGTGATGAAC 59.401 38.462 0.00 0.00 0.00 3.18
1638 2257 4.916041 TGATTTCCTCCTGTGATGAACT 57.084 40.909 0.00 0.00 0.00 3.01
1639 2258 6.373005 TTGATTTCCTCCTGTGATGAACTA 57.627 37.500 0.00 0.00 0.00 2.24
1640 2259 5.982356 TGATTTCCTCCTGTGATGAACTAG 58.018 41.667 0.00 0.00 0.00 2.57
1641 2260 5.485353 TGATTTCCTCCTGTGATGAACTAGT 59.515 40.000 0.00 0.00 0.00 2.57
1647 2266 6.071334 TCCTCCTGTGATGAACTAGTAGTTTG 60.071 42.308 16.56 2.78 38.80 2.93
1663 2282 6.373779 AGTAGTTTGCATTGTCTTGATTTCG 58.626 36.000 0.00 0.00 0.00 3.46
1668 2287 4.009002 TGCATTGTCTTGATTTCGATCCA 58.991 39.130 0.00 0.00 0.00 3.41
1669 2288 4.142622 TGCATTGTCTTGATTTCGATCCAC 60.143 41.667 0.00 0.00 0.00 4.02
1676 2295 4.162131 TCTTGATTTCGATCCACTGATCCA 59.838 41.667 0.00 0.00 43.82 3.41
1678 2297 2.293677 TTTCGATCCACTGATCCACG 57.706 50.000 0.00 0.00 43.82 4.94
1679 2298 0.179111 TTCGATCCACTGATCCACGC 60.179 55.000 0.00 0.00 43.82 5.34
1681 2300 1.592669 GATCCACTGATCCACGCCG 60.593 63.158 0.00 0.00 41.37 6.46
1683 2302 2.298158 ATCCACTGATCCACGCCGTC 62.298 60.000 0.00 0.00 0.00 4.79
1693 2312 2.733593 ACGCCGTCTCGCTTTGTC 60.734 61.111 0.00 0.00 0.00 3.18
1703 2322 1.270826 CTCGCTTTGTCTGAGACTCCA 59.729 52.381 14.42 0.00 33.15 3.86
1716 2335 2.996621 GAGACTCCATCACAACGGAAAG 59.003 50.000 0.00 0.00 0.00 2.62
1718 2337 3.071023 AGACTCCATCACAACGGAAAGAA 59.929 43.478 0.00 0.00 0.00 2.52
1720 2339 2.744202 CTCCATCACAACGGAAAGAAGG 59.256 50.000 0.00 0.00 0.00 3.46
1721 2340 2.105821 TCCATCACAACGGAAAGAAGGT 59.894 45.455 0.00 0.00 0.00 3.50
1722 2341 2.884639 CCATCACAACGGAAAGAAGGTT 59.115 45.455 0.00 0.00 0.00 3.50
1769 2388 1.276421 ACAGGACCAATGGAGACGAAG 59.724 52.381 6.16 0.00 0.00 3.79
1779 2398 2.048127 AGACGAAGCCAAGGTCGC 60.048 61.111 0.00 0.00 40.95 5.19
1791 2410 2.413634 CCAAGGTCGCGGACAAAAATAC 60.414 50.000 6.13 0.00 33.68 1.89
1794 2413 3.256558 AGGTCGCGGACAAAAATACTAC 58.743 45.455 6.13 0.00 33.68 2.73
1874 2501 2.393764 GATGCACAAGAAACCCAAACG 58.606 47.619 0.00 0.00 0.00 3.60
1877 2504 2.159310 TGCACAAGAAACCCAAACGAAG 60.159 45.455 0.00 0.00 0.00 3.79
1898 2551 2.264480 CATCGGCCACAACGAGGA 59.736 61.111 2.24 0.00 43.93 3.71
1914 2567 3.380004 ACGAGGAATTGCTTTGAACACAA 59.620 39.130 0.00 0.00 0.00 3.33
1915 2568 4.142271 ACGAGGAATTGCTTTGAACACAAA 60.142 37.500 0.00 0.00 33.37 2.83
1919 2572 6.273071 AGGAATTGCTTTGAACACAAAGTAC 58.727 36.000 19.12 8.27 46.81 2.73
1934 2589 7.312899 ACACAAAGTACAAGGAAAGAACAAAG 58.687 34.615 0.00 0.00 0.00 2.77
1947 2602 1.940613 GAACAAAGACAGTTCCGCAGT 59.059 47.619 0.00 0.00 39.48 4.40
1955 2610 0.370273 CAGTTCCGCAGTACAATCGC 59.630 55.000 0.00 0.00 0.00 4.58
1962 2617 1.668419 GCAGTACAATCGCCCAAGAT 58.332 50.000 0.00 0.00 0.00 2.40
1963 2618 2.017049 GCAGTACAATCGCCCAAGATT 58.983 47.619 0.00 0.00 41.12 2.40
1965 2620 3.119495 GCAGTACAATCGCCCAAGATTTT 60.119 43.478 0.00 0.00 38.66 1.82
1966 2621 4.662145 CAGTACAATCGCCCAAGATTTTC 58.338 43.478 0.00 0.00 38.66 2.29
1967 2622 3.694566 AGTACAATCGCCCAAGATTTTCC 59.305 43.478 0.00 0.00 38.66 3.13
1969 2624 3.165071 ACAATCGCCCAAGATTTTCCTT 58.835 40.909 0.00 0.00 38.66 3.36
1971 2626 4.040339 ACAATCGCCCAAGATTTTCCTTTT 59.960 37.500 0.00 0.00 38.66 2.27
1972 2627 3.934457 TCGCCCAAGATTTTCCTTTTC 57.066 42.857 0.00 0.00 0.00 2.29
1977 2632 5.050159 CGCCCAAGATTTTCCTTTTCTTTTG 60.050 40.000 0.00 0.00 0.00 2.44
1994 2657 4.098654 TCTTTTGAAAGGCAATCGACCAAA 59.901 37.500 3.83 0.00 36.15 3.28
2009 2672 6.352682 TCGACCAAAAATTACGGATACATG 57.647 37.500 0.00 0.00 0.00 3.21
2020 2683 1.869754 CGGATACATGAAGGGCGTGAG 60.870 57.143 0.00 0.00 36.97 3.51
2046 2709 3.849951 CGCCGGGCTACATGAGGT 61.850 66.667 18.34 0.00 0.00 3.85
2047 2710 2.109181 GCCGGGCTACATGAGGTC 59.891 66.667 12.87 0.00 0.00 3.85
2048 2711 2.435693 GCCGGGCTACATGAGGTCT 61.436 63.158 12.87 0.00 0.00 3.85
2049 2712 1.443407 CCGGGCTACATGAGGTCTG 59.557 63.158 0.00 0.00 0.00 3.51
2050 2713 1.330655 CCGGGCTACATGAGGTCTGT 61.331 60.000 0.00 0.00 0.00 3.41
2051 2714 0.179100 CGGGCTACATGAGGTCTGTG 60.179 60.000 0.00 0.00 0.00 3.66
2052 2715 0.179000 GGGCTACATGAGGTCTGTGG 59.821 60.000 0.00 0.00 0.00 4.17
2053 2716 0.179000 GGCTACATGAGGTCTGTGGG 59.821 60.000 0.00 0.00 0.00 4.61
2054 2717 1.195115 GCTACATGAGGTCTGTGGGA 58.805 55.000 0.00 0.00 0.00 4.37
2055 2718 1.137872 GCTACATGAGGTCTGTGGGAG 59.862 57.143 0.00 0.00 0.00 4.30
2056 2719 2.461695 CTACATGAGGTCTGTGGGAGT 58.538 52.381 0.00 0.00 0.00 3.85
2057 2720 0.979665 ACATGAGGTCTGTGGGAGTG 59.020 55.000 0.00 0.00 0.00 3.51
2058 2721 0.392193 CATGAGGTCTGTGGGAGTGC 60.392 60.000 0.00 0.00 0.00 4.40
2059 2722 1.892819 ATGAGGTCTGTGGGAGTGCG 61.893 60.000 0.00 0.00 0.00 5.34
2060 2723 3.941657 GAGGTCTGTGGGAGTGCGC 62.942 68.421 0.00 0.00 0.00 6.09
2073 2736 4.912485 TGCGCGGTGGGACGAAAA 62.912 61.111 8.83 0.00 35.47 2.29
2074 2737 3.652000 GCGCGGTGGGACGAAAAA 61.652 61.111 8.83 0.00 35.47 1.94
2075 2738 2.973316 GCGCGGTGGGACGAAAAAT 61.973 57.895 8.83 0.00 35.47 1.82
2076 2739 1.133869 CGCGGTGGGACGAAAAATC 59.866 57.895 0.00 0.00 35.47 2.17
2077 2740 1.504900 GCGGTGGGACGAAAAATCC 59.495 57.895 0.00 0.00 35.47 3.01
2082 2745 3.489391 GGGACGAAAAATCCCGGAT 57.511 52.632 0.73 0.00 46.51 4.18
2083 2746 1.021968 GGGACGAAAAATCCCGGATG 58.978 55.000 0.73 0.00 46.51 3.51
2084 2747 0.380733 GGACGAAAAATCCCGGATGC 59.619 55.000 0.73 0.00 0.00 3.91
2085 2748 1.091537 GACGAAAAATCCCGGATGCA 58.908 50.000 0.73 0.00 0.00 3.96
2086 2749 1.676006 GACGAAAAATCCCGGATGCAT 59.324 47.619 0.73 0.00 0.00 3.96
2087 2750 1.676006 ACGAAAAATCCCGGATGCATC 59.324 47.619 18.81 18.81 0.00 3.91
2088 2751 1.675483 CGAAAAATCCCGGATGCATCA 59.325 47.619 27.25 7.98 0.00 3.07
2089 2752 2.287188 CGAAAAATCCCGGATGCATCAG 60.287 50.000 27.25 22.95 0.00 2.90
2090 2753 2.442236 AAAATCCCGGATGCATCAGT 57.558 45.000 27.25 5.84 0.00 3.41
2091 2754 1.683943 AAATCCCGGATGCATCAGTG 58.316 50.000 27.25 15.56 0.00 3.66
2092 2755 0.548031 AATCCCGGATGCATCAGTGT 59.452 50.000 27.25 9.17 0.00 3.55
2093 2756 1.423584 ATCCCGGATGCATCAGTGTA 58.576 50.000 27.25 11.46 0.00 2.90
2094 2757 0.464036 TCCCGGATGCATCAGTGTAC 59.536 55.000 27.25 8.53 0.00 2.90
2095 2758 0.532862 CCCGGATGCATCAGTGTACC 60.533 60.000 27.25 8.58 0.00 3.34
2096 2759 0.177836 CCGGATGCATCAGTGTACCA 59.822 55.000 27.25 0.00 0.00 3.25
2097 2760 1.406751 CCGGATGCATCAGTGTACCAA 60.407 52.381 27.25 0.00 0.00 3.67
2098 2761 1.665679 CGGATGCATCAGTGTACCAAC 59.334 52.381 27.25 5.69 0.00 3.77
2099 2762 2.677902 CGGATGCATCAGTGTACCAACT 60.678 50.000 27.25 0.00 0.00 3.16
2100 2763 2.939103 GGATGCATCAGTGTACCAACTC 59.061 50.000 27.25 2.16 0.00 3.01
2101 2764 2.472695 TGCATCAGTGTACCAACTCC 57.527 50.000 0.00 0.00 0.00 3.85
2102 2765 1.003118 TGCATCAGTGTACCAACTCCC 59.997 52.381 0.00 0.00 0.00 4.30
2103 2766 1.679032 GCATCAGTGTACCAACTCCCC 60.679 57.143 0.00 0.00 0.00 4.81
2104 2767 1.909302 CATCAGTGTACCAACTCCCCT 59.091 52.381 0.00 0.00 0.00 4.79
2105 2768 2.112279 TCAGTGTACCAACTCCCCTT 57.888 50.000 0.00 0.00 0.00 3.95
2106 2769 2.414612 TCAGTGTACCAACTCCCCTTT 58.585 47.619 0.00 0.00 0.00 3.11
2107 2770 3.589641 TCAGTGTACCAACTCCCCTTTA 58.410 45.455 0.00 0.00 0.00 1.85
2108 2771 3.581332 TCAGTGTACCAACTCCCCTTTAG 59.419 47.826 0.00 0.00 0.00 1.85
2109 2772 3.581332 CAGTGTACCAACTCCCCTTTAGA 59.419 47.826 0.00 0.00 0.00 2.10
2110 2773 3.838903 AGTGTACCAACTCCCCTTTAGAG 59.161 47.826 0.00 0.00 37.39 2.43
2111 2774 2.570302 TGTACCAACTCCCCTTTAGAGC 59.430 50.000 0.00 0.00 34.56 4.09
2112 2775 1.742308 ACCAACTCCCCTTTAGAGCA 58.258 50.000 0.00 0.00 34.56 4.26
2113 2776 2.279173 ACCAACTCCCCTTTAGAGCAT 58.721 47.619 0.00 0.00 34.56 3.79
2114 2777 2.239907 ACCAACTCCCCTTTAGAGCATC 59.760 50.000 0.00 0.00 34.56 3.91
2128 2791 3.238108 GAGCATCTATACATCCGGGTG 57.762 52.381 14.80 14.80 0.00 4.61
2129 2792 1.902508 AGCATCTATACATCCGGGTGG 59.097 52.381 21.19 0.16 0.00 4.61
2130 2793 1.676014 GCATCTATACATCCGGGTGGC 60.676 57.143 21.19 6.90 34.14 5.01
2131 2794 1.066143 CATCTATACATCCGGGTGGCC 60.066 57.143 21.19 0.00 34.14 5.36
2132 2795 0.834687 TCTATACATCCGGGTGGCCC 60.835 60.000 21.19 0.00 41.09 5.80
2133 2796 1.074395 TATACATCCGGGTGGCCCA 60.074 57.895 21.19 0.90 45.83 5.36
2134 2797 0.694783 TATACATCCGGGTGGCCCAA 60.695 55.000 21.19 0.00 45.83 4.12
2135 2798 1.576368 ATACATCCGGGTGGCCCAAA 61.576 55.000 21.19 0.00 45.83 3.28
2136 2799 2.487274 TACATCCGGGTGGCCCAAAC 62.487 60.000 21.19 0.00 45.83 2.93
2137 2800 4.376170 ATCCGGGTGGCCCAAACC 62.376 66.667 0.00 0.00 45.83 3.27
2142 2805 4.280019 GGTGGCCCAAACCCGTCT 62.280 66.667 0.00 0.00 0.00 4.18
2143 2806 2.751688 GTGGCCCAAACCCGTCTA 59.248 61.111 0.00 0.00 0.00 2.59
2144 2807 1.073548 GTGGCCCAAACCCGTCTAA 59.926 57.895 0.00 0.00 0.00 2.10
2145 2808 0.537828 GTGGCCCAAACCCGTCTAAA 60.538 55.000 0.00 0.00 0.00 1.85
2146 2809 0.185416 TGGCCCAAACCCGTCTAAAA 59.815 50.000 0.00 0.00 0.00 1.52
2147 2810 0.599558 GGCCCAAACCCGTCTAAAAC 59.400 55.000 0.00 0.00 0.00 2.43
2148 2811 1.320507 GCCCAAACCCGTCTAAAACA 58.679 50.000 0.00 0.00 0.00 2.83
2149 2812 1.890489 GCCCAAACCCGTCTAAAACAT 59.110 47.619 0.00 0.00 0.00 2.71
2150 2813 2.297880 GCCCAAACCCGTCTAAAACATT 59.702 45.455 0.00 0.00 0.00 2.71
2151 2814 3.613193 GCCCAAACCCGTCTAAAACATTC 60.613 47.826 0.00 0.00 0.00 2.67
2152 2815 3.365565 CCCAAACCCGTCTAAAACATTCG 60.366 47.826 0.00 0.00 0.00 3.34
2153 2816 3.365565 CCAAACCCGTCTAAAACATTCGG 60.366 47.826 0.00 0.00 40.72 4.30
2154 2817 3.405823 AACCCGTCTAAAACATTCGGA 57.594 42.857 3.45 0.00 43.22 4.55
2155 2818 2.691927 ACCCGTCTAAAACATTCGGAC 58.308 47.619 3.45 0.00 43.22 4.79
2156 2819 1.657094 CCCGTCTAAAACATTCGGACG 59.343 52.381 0.00 0.00 45.92 4.79
2158 2821 2.331194 CGTCTAAAACATTCGGACGGT 58.669 47.619 0.00 0.00 43.69 4.83
2159 2822 2.343544 CGTCTAAAACATTCGGACGGTC 59.656 50.000 0.00 0.00 43.69 4.79
2160 2823 2.669924 GTCTAAAACATTCGGACGGTCC 59.330 50.000 17.38 17.38 0.00 4.46
2161 2824 2.299582 TCTAAAACATTCGGACGGTCCA 59.700 45.455 25.80 8.80 35.91 4.02
2162 2825 2.194201 AAAACATTCGGACGGTCCAT 57.806 45.000 25.80 10.80 35.91 3.41
2163 2826 1.734163 AAACATTCGGACGGTCCATC 58.266 50.000 25.80 0.41 35.91 3.51
2164 2827 0.107848 AACATTCGGACGGTCCATCC 60.108 55.000 25.80 0.00 35.91 3.51
2165 2828 0.976073 ACATTCGGACGGTCCATCCT 60.976 55.000 25.80 5.45 35.91 3.24
2166 2829 0.530650 CATTCGGACGGTCCATCCTG 60.531 60.000 25.80 13.36 35.91 3.86
2167 2830 0.976073 ATTCGGACGGTCCATCCTGT 60.976 55.000 25.80 3.65 35.91 4.00
2168 2831 1.601419 TTCGGACGGTCCATCCTGTC 61.601 60.000 25.80 0.00 35.91 3.51
2169 2832 2.348104 CGGACGGTCCATCCTGTCA 61.348 63.158 25.80 0.00 39.58 3.58
2170 2833 1.676678 CGGACGGTCCATCCTGTCAT 61.677 60.000 25.80 0.00 39.58 3.06
2171 2834 0.541863 GGACGGTCCATCCTGTCATT 59.458 55.000 22.10 0.00 39.58 2.57
2172 2835 1.656652 GACGGTCCATCCTGTCATTG 58.343 55.000 0.00 0.00 38.56 2.82
2173 2836 1.207089 GACGGTCCATCCTGTCATTGA 59.793 52.381 0.00 0.00 38.56 2.57
2174 2837 1.066143 ACGGTCCATCCTGTCATTGAC 60.066 52.381 9.93 9.93 0.00 3.18
2175 2838 1.743772 CGGTCCATCCTGTCATTGACC 60.744 57.143 14.05 0.00 35.91 4.02
2176 2839 1.561542 GGTCCATCCTGTCATTGACCT 59.438 52.381 14.05 0.00 36.21 3.85
2177 2840 2.636830 GTCCATCCTGTCATTGACCTG 58.363 52.381 14.05 7.06 0.00 4.00
2178 2841 2.026822 GTCCATCCTGTCATTGACCTGT 60.027 50.000 14.05 0.00 0.00 4.00
2179 2842 2.237143 TCCATCCTGTCATTGACCTGTC 59.763 50.000 14.05 0.00 0.00 3.51
2180 2843 2.026915 CCATCCTGTCATTGACCTGTCA 60.027 50.000 14.05 0.00 37.91 3.58
2181 2844 2.839486 TCCTGTCATTGACCTGTCAC 57.161 50.000 14.05 0.00 39.66 3.67
2182 2845 1.000843 TCCTGTCATTGACCTGTCACG 59.999 52.381 14.05 0.00 39.66 4.35
2183 2846 1.432514 CTGTCATTGACCTGTCACGG 58.567 55.000 14.05 0.00 39.66 4.94
2184 2847 1.000843 CTGTCATTGACCTGTCACGGA 59.999 52.381 14.05 0.00 39.66 4.69
2185 2848 1.414550 TGTCATTGACCTGTCACGGAA 59.585 47.619 14.05 0.00 39.66 4.30
2186 2849 2.038426 TGTCATTGACCTGTCACGGAAT 59.962 45.455 14.05 0.00 39.66 3.01
2187 2850 3.074412 GTCATTGACCTGTCACGGAATT 58.926 45.455 5.44 0.00 39.66 2.17
2188 2851 3.502211 GTCATTGACCTGTCACGGAATTT 59.498 43.478 5.44 0.00 39.66 1.82
2189 2852 3.751175 TCATTGACCTGTCACGGAATTTC 59.249 43.478 0.00 0.00 39.66 2.17
2190 2853 1.790755 TGACCTGTCACGGAATTTCG 58.209 50.000 4.10 4.10 34.14 3.46
2191 2854 1.341852 TGACCTGTCACGGAATTTCGA 59.658 47.619 14.41 0.00 34.14 3.71
2192 2855 1.725164 GACCTGTCACGGAATTTCGAC 59.275 52.381 14.41 1.67 0.00 4.20
2193 2856 1.343465 ACCTGTCACGGAATTTCGACT 59.657 47.619 14.41 0.00 0.00 4.18
2194 2857 2.224209 ACCTGTCACGGAATTTCGACTT 60.224 45.455 14.41 0.00 0.00 3.01
2195 2858 3.006110 ACCTGTCACGGAATTTCGACTTA 59.994 43.478 14.41 0.00 0.00 2.24
2196 2859 3.612860 CCTGTCACGGAATTTCGACTTAG 59.387 47.826 14.41 5.78 0.00 2.18
2197 2860 4.482386 CTGTCACGGAATTTCGACTTAGA 58.518 43.478 14.41 0.00 0.00 2.10
2198 2861 4.232221 TGTCACGGAATTTCGACTTAGAC 58.768 43.478 14.41 12.10 0.00 2.59
2199 2862 4.232221 GTCACGGAATTTCGACTTAGACA 58.768 43.478 14.41 0.00 0.00 3.41
2200 2863 4.323868 GTCACGGAATTTCGACTTAGACAG 59.676 45.833 14.41 0.00 0.00 3.51
2201 2864 3.612860 CACGGAATTTCGACTTAGACAGG 59.387 47.826 14.41 0.00 0.00 4.00
2202 2865 2.603560 CGGAATTTCGACTTAGACAGGC 59.396 50.000 0.00 0.00 0.00 4.85
2203 2866 3.676324 CGGAATTTCGACTTAGACAGGCT 60.676 47.826 0.00 0.00 0.00 4.58
2204 2867 4.254492 GGAATTTCGACTTAGACAGGCTT 58.746 43.478 0.00 0.00 0.00 4.35
2205 2868 4.330347 GGAATTTCGACTTAGACAGGCTTC 59.670 45.833 0.00 0.00 0.00 3.86
2206 2869 4.810191 ATTTCGACTTAGACAGGCTTCT 57.190 40.909 0.00 0.00 0.00 2.85
2207 2870 4.602340 TTTCGACTTAGACAGGCTTCTT 57.398 40.909 4.87 0.00 0.00 2.52
2208 2871 5.717078 TTTCGACTTAGACAGGCTTCTTA 57.283 39.130 4.87 0.00 0.00 2.10
2209 2872 5.717078 TTCGACTTAGACAGGCTTCTTAA 57.283 39.130 4.87 0.00 0.00 1.85
2210 2873 5.717078 TCGACTTAGACAGGCTTCTTAAA 57.283 39.130 4.87 0.00 0.00 1.52
2211 2874 6.282199 TCGACTTAGACAGGCTTCTTAAAT 57.718 37.500 4.87 0.00 0.00 1.40
2212 2875 7.400599 TCGACTTAGACAGGCTTCTTAAATA 57.599 36.000 4.87 0.00 0.00 1.40
2213 2876 8.008513 TCGACTTAGACAGGCTTCTTAAATAT 57.991 34.615 4.87 0.00 0.00 1.28
2214 2877 7.921214 TCGACTTAGACAGGCTTCTTAAATATG 59.079 37.037 4.87 0.00 0.00 1.78
2215 2878 7.306866 CGACTTAGACAGGCTTCTTAAATATGC 60.307 40.741 4.87 0.00 0.00 3.14
2216 2879 6.768381 ACTTAGACAGGCTTCTTAAATATGCC 59.232 38.462 4.87 0.00 43.52 4.40
2224 2887 5.693555 GGCTTCTTAAATATGCCTCAAATGC 59.306 40.000 0.00 0.00 40.36 3.56
2225 2888 6.462067 GGCTTCTTAAATATGCCTCAAATGCT 60.462 38.462 0.00 0.00 40.36 3.79
2226 2889 6.640092 GCTTCTTAAATATGCCTCAAATGCTC 59.360 38.462 0.00 0.00 0.00 4.26
2227 2890 7.643569 TTCTTAAATATGCCTCAAATGCTCA 57.356 32.000 0.00 0.00 0.00 4.26
2228 2891 7.643569 TCTTAAATATGCCTCAAATGCTCAA 57.356 32.000 0.00 0.00 0.00 3.02
2229 2892 8.065473 TCTTAAATATGCCTCAAATGCTCAAA 57.935 30.769 0.00 0.00 0.00 2.69
2230 2893 8.698210 TCTTAAATATGCCTCAAATGCTCAAAT 58.302 29.630 0.00 0.00 0.00 2.32
2231 2894 9.970395 CTTAAATATGCCTCAAATGCTCAAATA 57.030 29.630 0.00 0.00 0.00 1.40
2232 2895 9.748708 TTAAATATGCCTCAAATGCTCAAATAC 57.251 29.630 0.00 0.00 0.00 1.89
2233 2896 3.763097 TGCCTCAAATGCTCAAATACG 57.237 42.857 0.00 0.00 0.00 3.06
2234 2897 2.423185 TGCCTCAAATGCTCAAATACGG 59.577 45.455 0.00 0.00 0.00 4.02
2235 2898 2.682856 GCCTCAAATGCTCAAATACGGA 59.317 45.455 0.00 0.00 0.00 4.69
2236 2899 3.128589 GCCTCAAATGCTCAAATACGGAA 59.871 43.478 0.00 0.00 0.00 4.30
2237 2900 4.662145 CCTCAAATGCTCAAATACGGAAC 58.338 43.478 0.00 0.00 0.00 3.62
2250 2913 4.090723 GGAACGGGTTTGGAAGGG 57.909 61.111 0.00 0.00 0.00 3.95
2251 2914 1.605451 GGAACGGGTTTGGAAGGGG 60.605 63.158 0.00 0.00 0.00 4.79
2252 2915 2.203582 AACGGGTTTGGAAGGGGC 60.204 61.111 0.00 0.00 0.00 5.80
2253 2916 4.653888 ACGGGTTTGGAAGGGGCG 62.654 66.667 0.00 0.00 0.00 6.13
2289 2952 4.530857 CGACAGCCCGACCCCATC 62.531 72.222 0.00 0.00 0.00 3.51
2299 2962 2.880770 GACCCCATCGGAAATTGCA 58.119 52.632 0.00 0.00 34.64 4.08
2300 2963 1.402787 GACCCCATCGGAAATTGCAT 58.597 50.000 0.00 0.00 34.64 3.96
2301 2964 1.338020 GACCCCATCGGAAATTGCATC 59.662 52.381 0.00 0.00 34.64 3.91
2302 2965 1.341877 ACCCCATCGGAAATTGCATCA 60.342 47.619 0.00 0.00 34.64 3.07
2303 2966 1.755959 CCCCATCGGAAATTGCATCAA 59.244 47.619 0.00 0.00 0.00 2.57
2304 2967 2.168106 CCCCATCGGAAATTGCATCAAA 59.832 45.455 0.00 0.00 0.00 2.69
2305 2968 3.181463 CCCCATCGGAAATTGCATCAAAT 60.181 43.478 0.00 0.00 0.00 2.32
2306 2969 4.053295 CCCATCGGAAATTGCATCAAATC 58.947 43.478 0.00 0.00 0.00 2.17
2307 2970 4.202182 CCCATCGGAAATTGCATCAAATCT 60.202 41.667 0.00 0.00 0.00 2.40
2308 2971 5.009911 CCCATCGGAAATTGCATCAAATCTA 59.990 40.000 0.00 0.00 0.00 1.98
2309 2972 6.294899 CCCATCGGAAATTGCATCAAATCTAT 60.295 38.462 0.00 0.00 0.00 1.98
2310 2973 6.805271 CCATCGGAAATTGCATCAAATCTATC 59.195 38.462 0.00 0.00 0.00 2.08
2311 2974 6.940831 TCGGAAATTGCATCAAATCTATCA 57.059 33.333 0.00 0.00 0.00 2.15
2312 2975 7.332213 TCGGAAATTGCATCAAATCTATCAA 57.668 32.000 0.00 0.00 0.00 2.57
2313 2976 7.770201 TCGGAAATTGCATCAAATCTATCAAA 58.230 30.769 0.00 0.00 0.00 2.69
2314 2977 7.701924 TCGGAAATTGCATCAAATCTATCAAAC 59.298 33.333 0.00 0.00 0.00 2.93
2315 2978 7.043192 CGGAAATTGCATCAAATCTATCAAACC 60.043 37.037 0.00 0.00 0.00 3.27
2316 2979 7.225341 GGAAATTGCATCAAATCTATCAAACCC 59.775 37.037 0.00 0.00 0.00 4.11
2317 2980 7.427989 AATTGCATCAAATCTATCAAACCCT 57.572 32.000 0.00 0.00 0.00 4.34
2318 2981 6.855763 TTGCATCAAATCTATCAAACCCTT 57.144 33.333 0.00 0.00 0.00 3.95
2319 2982 6.455360 TGCATCAAATCTATCAAACCCTTC 57.545 37.500 0.00 0.00 0.00 3.46
2320 2983 5.360714 TGCATCAAATCTATCAAACCCTTCC 59.639 40.000 0.00 0.00 0.00 3.46
2321 2984 5.595952 GCATCAAATCTATCAAACCCTTCCT 59.404 40.000 0.00 0.00 0.00 3.36
2322 2985 6.238869 GCATCAAATCTATCAAACCCTTCCTC 60.239 42.308 0.00 0.00 0.00 3.71
2323 2986 5.755849 TCAAATCTATCAAACCCTTCCTCC 58.244 41.667 0.00 0.00 0.00 4.30
2324 2987 5.492524 TCAAATCTATCAAACCCTTCCTCCT 59.507 40.000 0.00 0.00 0.00 3.69
2325 2988 5.638530 AATCTATCAAACCCTTCCTCCTC 57.361 43.478 0.00 0.00 0.00 3.71
2326 2989 3.385115 TCTATCAAACCCTTCCTCCTCC 58.615 50.000 0.00 0.00 0.00 4.30
2327 2990 2.367947 ATCAAACCCTTCCTCCTCCT 57.632 50.000 0.00 0.00 0.00 3.69
2328 2991 1.657804 TCAAACCCTTCCTCCTCCTC 58.342 55.000 0.00 0.00 0.00 3.71
2329 2992 0.621082 CAAACCCTTCCTCCTCCTCC 59.379 60.000 0.00 0.00 0.00 4.30
2330 2993 0.550393 AAACCCTTCCTCCTCCTCCC 60.550 60.000 0.00 0.00 0.00 4.30
2331 2994 1.465189 AACCCTTCCTCCTCCTCCCT 61.465 60.000 0.00 0.00 0.00 4.20
2332 2995 1.074850 CCCTTCCTCCTCCTCCCTC 60.075 68.421 0.00 0.00 0.00 4.30
2333 2996 1.074850 CCTTCCTCCTCCTCCCTCC 60.075 68.421 0.00 0.00 0.00 4.30
2334 2997 1.074850 CTTCCTCCTCCTCCCTCCC 60.075 68.421 0.00 0.00 0.00 4.30
2335 2998 2.613576 CTTCCTCCTCCTCCCTCCCC 62.614 70.000 0.00 0.00 0.00 4.81
2336 2999 4.179599 CCTCCTCCTCCCTCCCCC 62.180 77.778 0.00 0.00 0.00 5.40
2337 3000 3.039526 CTCCTCCTCCCTCCCCCT 61.040 72.222 0.00 0.00 0.00 4.79
2338 3001 3.036959 TCCTCCTCCCTCCCCCTC 61.037 72.222 0.00 0.00 0.00 4.30
2339 3002 4.179599 CCTCCTCCCTCCCCCTCC 62.180 77.778 0.00 0.00 0.00 4.30
2340 3003 3.368501 CTCCTCCCTCCCCCTCCA 61.369 72.222 0.00 0.00 0.00 3.86
2341 3004 2.879490 TCCTCCCTCCCCCTCCAA 60.879 66.667 0.00 0.00 0.00 3.53
2342 3005 2.692741 CCTCCCTCCCCCTCCAAC 60.693 72.222 0.00 0.00 0.00 3.77
2343 3006 2.692741 CTCCCTCCCCCTCCAACC 60.693 72.222 0.00 0.00 0.00 3.77
2344 3007 3.216371 TCCCTCCCCCTCCAACCT 61.216 66.667 0.00 0.00 0.00 3.50
2345 3008 2.204306 CCCTCCCCCTCCAACCTT 60.204 66.667 0.00 0.00 0.00 3.50
2346 3009 1.857348 CCCTCCCCCTCCAACCTTT 60.857 63.158 0.00 0.00 0.00 3.11
2347 3010 1.691823 CCTCCCCCTCCAACCTTTC 59.308 63.158 0.00 0.00 0.00 2.62
2348 3011 1.691823 CTCCCCCTCCAACCTTTCC 59.308 63.158 0.00 0.00 0.00 3.13
2349 3012 1.855451 TCCCCCTCCAACCTTTCCC 60.855 63.158 0.00 0.00 0.00 3.97
2350 3013 2.355115 CCCCTCCAACCTTTCCCG 59.645 66.667 0.00 0.00 0.00 5.14
2351 3014 2.361230 CCCTCCAACCTTTCCCGC 60.361 66.667 0.00 0.00 0.00 6.13
2352 3015 2.746277 CCTCCAACCTTTCCCGCG 60.746 66.667 0.00 0.00 0.00 6.46
2353 3016 3.431725 CTCCAACCTTTCCCGCGC 61.432 66.667 0.00 0.00 0.00 6.86
2354 3017 3.901797 CTCCAACCTTTCCCGCGCT 62.902 63.158 5.56 0.00 0.00 5.92
2355 3018 3.431725 CCAACCTTTCCCGCGCTC 61.432 66.667 5.56 0.00 0.00 5.03
2356 3019 3.788766 CAACCTTTCCCGCGCTCG 61.789 66.667 5.56 0.00 0.00 5.03
2357 3020 3.998672 AACCTTTCCCGCGCTCGA 61.999 61.111 5.56 0.00 38.10 4.04
2358 3021 3.934391 AACCTTTCCCGCGCTCGAG 62.934 63.158 8.45 8.45 38.10 4.04
2382 3045 4.335647 CCGTCTGCCACCCTTGCT 62.336 66.667 0.00 0.00 0.00 3.91
2383 3046 2.743928 CGTCTGCCACCCTTGCTC 60.744 66.667 0.00 0.00 0.00 4.26
2384 3047 2.360475 GTCTGCCACCCTTGCTCC 60.360 66.667 0.00 0.00 0.00 4.70
2385 3048 3.650950 TCTGCCACCCTTGCTCCC 61.651 66.667 0.00 0.00 0.00 4.30
2386 3049 4.748144 CTGCCACCCTTGCTCCCC 62.748 72.222 0.00 0.00 0.00 4.81
2388 3051 4.066139 GCCACCCTTGCTCCCCAT 62.066 66.667 0.00 0.00 0.00 4.00
2389 3052 2.276740 CCACCCTTGCTCCCCATC 59.723 66.667 0.00 0.00 0.00 3.51
2390 3053 2.276740 CACCCTTGCTCCCCATCC 59.723 66.667 0.00 0.00 0.00 3.51
2391 3054 2.128226 ACCCTTGCTCCCCATCCT 59.872 61.111 0.00 0.00 0.00 3.24
2392 3055 2.003548 ACCCTTGCTCCCCATCCTC 61.004 63.158 0.00 0.00 0.00 3.71
2393 3056 2.002977 CCCTTGCTCCCCATCCTCA 61.003 63.158 0.00 0.00 0.00 3.86
2394 3057 1.358830 CCCTTGCTCCCCATCCTCAT 61.359 60.000 0.00 0.00 0.00 2.90
2395 3058 0.110104 CCTTGCTCCCCATCCTCATC 59.890 60.000 0.00 0.00 0.00 2.92
2396 3059 0.841961 CTTGCTCCCCATCCTCATCA 59.158 55.000 0.00 0.00 0.00 3.07
2397 3060 0.548031 TTGCTCCCCATCCTCATCAC 59.452 55.000 0.00 0.00 0.00 3.06
2398 3061 0.621280 TGCTCCCCATCCTCATCACA 60.621 55.000 0.00 0.00 0.00 3.58
2399 3062 0.108207 GCTCCCCATCCTCATCACAG 59.892 60.000 0.00 0.00 0.00 3.66
2400 3063 0.763652 CTCCCCATCCTCATCACAGG 59.236 60.000 0.00 0.00 34.40 4.00
2401 3064 0.044702 TCCCCATCCTCATCACAGGT 59.955 55.000 0.00 0.00 34.76 4.00
2402 3065 0.471617 CCCCATCCTCATCACAGGTC 59.528 60.000 0.00 0.00 34.76 3.85
2403 3066 1.504912 CCCATCCTCATCACAGGTCT 58.495 55.000 0.00 0.00 34.76 3.85
2404 3067 1.415659 CCCATCCTCATCACAGGTCTC 59.584 57.143 0.00 0.00 34.76 3.36
2405 3068 1.068281 CCATCCTCATCACAGGTCTCG 59.932 57.143 0.00 0.00 34.76 4.04
2406 3069 2.027385 CATCCTCATCACAGGTCTCGA 58.973 52.381 0.00 0.00 34.76 4.04
2407 3070 2.443958 TCCTCATCACAGGTCTCGAT 57.556 50.000 0.00 0.00 34.76 3.59
2408 3071 2.302260 TCCTCATCACAGGTCTCGATC 58.698 52.381 0.00 0.00 34.76 3.69
2409 3072 1.339610 CCTCATCACAGGTCTCGATCC 59.660 57.143 0.00 0.00 0.00 3.36
2410 3073 2.027385 CTCATCACAGGTCTCGATCCA 58.973 52.381 9.02 0.00 0.00 3.41
2411 3074 2.627221 CTCATCACAGGTCTCGATCCAT 59.373 50.000 9.02 0.00 0.00 3.41
2412 3075 2.625314 TCATCACAGGTCTCGATCCATC 59.375 50.000 9.02 0.00 0.00 3.51
2424 3087 2.988343 CGATCCATCGCCGTAGATATC 58.012 52.381 0.00 0.00 43.84 1.63
2425 3088 2.600084 CGATCCATCGCCGTAGATATCG 60.600 54.545 0.00 7.59 43.84 2.92
2426 3089 1.817357 TCCATCGCCGTAGATATCGT 58.183 50.000 0.00 0.00 0.00 3.73
2427 3090 1.736126 TCCATCGCCGTAGATATCGTC 59.264 52.381 0.00 0.00 0.00 4.20
2428 3091 1.202154 CCATCGCCGTAGATATCGTCC 60.202 57.143 0.00 0.00 0.00 4.79
2429 3092 1.467342 CATCGCCGTAGATATCGTCCA 59.533 52.381 0.00 0.00 0.00 4.02
2430 3093 1.154197 TCGCCGTAGATATCGTCCAG 58.846 55.000 0.00 0.00 0.00 3.86
2431 3094 0.454620 CGCCGTAGATATCGTCCAGC 60.455 60.000 0.00 0.00 0.00 4.85
2432 3095 0.109226 GCCGTAGATATCGTCCAGCC 60.109 60.000 0.00 0.00 0.00 4.85
2433 3096 0.526662 CCGTAGATATCGTCCAGCCC 59.473 60.000 0.00 0.00 0.00 5.19
2434 3097 0.168348 CGTAGATATCGTCCAGCCCG 59.832 60.000 0.00 0.00 0.00 6.13
2435 3098 1.245732 GTAGATATCGTCCAGCCCGT 58.754 55.000 0.00 0.00 0.00 5.28
2436 3099 1.199558 GTAGATATCGTCCAGCCCGTC 59.800 57.143 0.00 0.00 0.00 4.79
2437 3100 1.179814 AGATATCGTCCAGCCCGTCC 61.180 60.000 0.00 0.00 0.00 4.79
2438 3101 2.156051 GATATCGTCCAGCCCGTCCC 62.156 65.000 0.00 0.00 0.00 4.46
2463 3126 4.578913 CGTGACGGAGATGCAGTT 57.421 55.556 0.00 0.00 0.00 3.16
2464 3127 2.363807 CGTGACGGAGATGCAGTTC 58.636 57.895 0.00 0.00 0.00 3.01
2465 3128 1.406219 CGTGACGGAGATGCAGTTCG 61.406 60.000 0.00 0.00 0.00 3.95
2466 3129 1.446099 TGACGGAGATGCAGTTCGC 60.446 57.895 0.00 0.00 42.89 4.70
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
122 123 1.306141 TTCCCTCTCCAGCGATGGT 60.306 57.895 20.97 0.00 0.00 3.55
143 147 1.997874 CTCCCCTGTCCTCCCCTTG 60.998 68.421 0.00 0.00 0.00 3.61
184 229 4.219999 GCCTCTGCTCTCTCCCGC 62.220 72.222 0.00 0.00 33.53 6.13
231 295 2.047274 CCTCGTCGTTGGCCACAT 60.047 61.111 3.88 0.00 0.00 3.21
244 311 2.918230 ATAAAACCCGCCGCTCCTCG 62.918 60.000 0.00 0.00 38.08 4.63
246 313 0.106149 CTATAAAACCCGCCGCTCCT 59.894 55.000 0.00 0.00 0.00 3.69
321 428 3.016736 CGGTCAGCCTTACCATTGATTT 58.983 45.455 0.00 0.00 36.78 2.17
406 524 2.507102 CAGCCGCGTCAACGAGAT 60.507 61.111 4.92 0.00 41.67 2.75
441 559 0.748005 CCGGGGCGAGTGATTTTCAT 60.748 55.000 0.00 0.00 0.00 2.57
442 560 1.376683 CCGGGGCGAGTGATTTTCA 60.377 57.895 0.00 0.00 0.00 2.69
475 631 2.036098 TACTCAGGCCGAACCCGA 59.964 61.111 0.00 0.00 40.58 5.14
530 687 0.252479 CCAGTCATGCCTCAGAAGCT 59.748 55.000 0.00 0.00 0.00 3.74
560 718 0.102300 GTTTTTCAGTGCCAACGCCT 59.898 50.000 0.00 0.00 0.00 5.52
566 724 1.021202 CCAGACGTTTTTCAGTGCCA 58.979 50.000 0.00 0.00 0.00 4.92
572 731 1.766496 ACCCTCTCCAGACGTTTTTCA 59.234 47.619 0.00 0.00 0.00 2.69
634 794 1.142465 CATTCCCTGCCTACTCAGCAT 59.858 52.381 0.00 0.00 40.04 3.79
650 810 7.064253 CAGAAAAGAAATGATGCCCTTTCATTC 59.936 37.037 0.00 0.00 41.69 2.67
695 856 7.164803 AGGTTACATTCTCTCTCTTTTGGAAG 58.835 38.462 0.00 0.00 0.00 3.46
699 860 9.061435 AGAAAAGGTTACATTCTCTCTCTTTTG 57.939 33.333 0.00 0.00 34.60 2.44
737 900 3.434637 TGCTTCAAGAAAAAGTTGCGTC 58.565 40.909 0.00 0.00 0.00 5.19
779 942 2.030262 TGCATGCCGTTTTTGCCC 59.970 55.556 16.68 0.00 35.51 5.36
781 944 1.486644 AACGTGCATGCCGTTTTTGC 61.487 50.000 29.21 2.00 45.46 3.68
796 961 4.208460 CCGTATCGATGATGCTTTAAACGT 59.792 41.667 8.54 0.00 0.00 3.99
833 1000 3.626924 AGCCCGTCTGTTTCGCCT 61.627 61.111 0.00 0.00 0.00 5.52
875 1060 2.398554 TGATCGGAAAAGCGGCAGC 61.399 57.895 0.00 0.00 45.58 5.25
938 1530 1.531423 AGAGGACGTACGTGTCATGT 58.469 50.000 28.16 5.53 40.72 3.21
1071 1681 4.498520 TAGAGCTCTGCGTGCGCC 62.499 66.667 26.78 0.00 41.09 6.53
1081 1691 1.817609 GAGTTCGTTCGCTAGAGCTC 58.182 55.000 5.27 5.27 37.51 4.09
1104 1717 4.996434 CCATCGCCGCCATCCCTC 62.996 72.222 0.00 0.00 0.00 4.30
1162 1775 2.919494 CGGCACCTTGAACTTGGCC 61.919 63.158 0.00 0.00 38.04 5.36
1474 2087 2.866762 GCGCCTCTTATAGAACCAACTG 59.133 50.000 0.00 0.00 0.00 3.16
1509 2122 4.976116 GGTCAACACACAAACTAATCAAGC 59.024 41.667 0.00 0.00 0.00 4.01
1518 2131 2.004017 TCACTCGGTCAACACACAAAC 58.996 47.619 0.00 0.00 0.00 2.93
1561 2177 2.492019 TCACAAGATAGCATCGTCGG 57.508 50.000 0.00 0.00 0.00 4.79
1562 2178 7.796958 TTATAATCACAAGATAGCATCGTCG 57.203 36.000 0.00 0.00 33.08 5.12
1568 2184 9.737844 TGGCATAATTATAATCACAAGATAGCA 57.262 29.630 0.00 0.00 33.08 3.49
1592 2211 5.786264 ACAGTTTACGGAGGAGTATATGG 57.214 43.478 0.00 0.00 0.00 2.74
1597 2216 7.414222 AATCAATACAGTTTACGGAGGAGTA 57.586 36.000 0.00 0.00 0.00 2.59
1599 2218 6.258068 GGAAATCAATACAGTTTACGGAGGAG 59.742 42.308 0.00 0.00 0.00 3.69
1600 2219 6.070424 AGGAAATCAATACAGTTTACGGAGGA 60.070 38.462 0.00 0.00 0.00 3.71
1601 2220 6.113411 AGGAAATCAATACAGTTTACGGAGG 58.887 40.000 0.00 0.00 0.00 4.30
1602 2221 6.258068 GGAGGAAATCAATACAGTTTACGGAG 59.742 42.308 0.00 0.00 0.00 4.63
1603 2222 6.070424 AGGAGGAAATCAATACAGTTTACGGA 60.070 38.462 0.00 0.00 0.00 4.69
1604 2223 6.037172 CAGGAGGAAATCAATACAGTTTACGG 59.963 42.308 0.00 0.00 0.00 4.02
1615 2234 5.824421 AGTTCATCACAGGAGGAAATCAAT 58.176 37.500 0.00 0.00 44.49 2.57
1623 2242 5.923733 AACTACTAGTTCATCACAGGAGG 57.076 43.478 0.00 0.00 31.77 4.30
1627 2246 6.974932 ATGCAAACTACTAGTTCATCACAG 57.025 37.500 0.00 0.00 37.47 3.66
1637 2256 7.689812 CGAAATCAAGACAATGCAAACTACTAG 59.310 37.037 0.00 0.00 0.00 2.57
1638 2257 7.386573 TCGAAATCAAGACAATGCAAACTACTA 59.613 33.333 0.00 0.00 0.00 1.82
1639 2258 6.204688 TCGAAATCAAGACAATGCAAACTACT 59.795 34.615 0.00 0.00 0.00 2.57
1640 2259 6.370593 TCGAAATCAAGACAATGCAAACTAC 58.629 36.000 0.00 0.00 0.00 2.73
1641 2260 6.552859 TCGAAATCAAGACAATGCAAACTA 57.447 33.333 0.00 0.00 0.00 2.24
1647 2266 4.095483 AGTGGATCGAAATCAAGACAATGC 59.905 41.667 0.00 0.00 33.21 3.56
1668 2287 2.885861 GAGACGGCGTGGATCAGT 59.114 61.111 21.19 0.00 0.00 3.41
1669 2288 2.278206 CGAGACGGCGTGGATCAG 60.278 66.667 21.19 5.70 0.00 2.90
1676 2295 2.733593 GACAAAGCGAGACGGCGT 60.734 61.111 14.65 14.65 38.18 5.68
1678 2297 1.347817 CTCAGACAAAGCGAGACGGC 61.348 60.000 0.00 0.00 0.00 5.68
1679 2298 0.241213 TCTCAGACAAAGCGAGACGG 59.759 55.000 0.00 0.00 30.94 4.79
1683 2302 1.270826 TGGAGTCTCAGACAAAGCGAG 59.729 52.381 7.77 0.00 34.60 5.03
1693 2312 1.546029 TCCGTTGTGATGGAGTCTCAG 59.454 52.381 1.47 0.00 36.01 3.35
1700 2319 2.105821 ACCTTCTTTCCGTTGTGATGGA 59.894 45.455 0.00 0.00 39.22 3.41
1703 2322 6.702716 TTTTAACCTTCTTTCCGTTGTGAT 57.297 33.333 0.00 0.00 0.00 3.06
1729 2348 1.039068 TTTTGGTGCTCCATGGTGTG 58.961 50.000 12.58 4.75 43.91 3.82
1734 2353 1.962807 TCCTGTTTTTGGTGCTCCATG 59.037 47.619 8.61 0.00 43.91 3.66
1737 2356 0.673985 GGTCCTGTTTTTGGTGCTCC 59.326 55.000 0.00 0.00 0.00 4.70
1769 2388 2.065906 TTTTTGTCCGCGACCTTGGC 62.066 55.000 8.23 0.00 0.00 4.52
1779 2398 5.232414 GCTGCTAGAGTAGTATTTTTGTCCG 59.768 44.000 0.00 0.00 0.00 4.79
1791 2410 1.133216 TGCTTGTCGCTGCTAGAGTAG 59.867 52.381 0.00 0.00 40.11 2.57
1794 2413 1.409227 CGTGCTTGTCGCTGCTAGAG 61.409 60.000 0.00 0.00 40.11 2.43
1891 2521 3.380004 TGTGTTCAAAGCAATTCCTCGTT 59.620 39.130 0.00 0.00 0.00 3.85
1892 2522 2.948979 TGTGTTCAAAGCAATTCCTCGT 59.051 40.909 0.00 0.00 0.00 4.18
1914 2567 6.884836 ACTGTCTTTGTTCTTTCCTTGTACTT 59.115 34.615 0.00 0.00 0.00 2.24
1915 2568 6.415573 ACTGTCTTTGTTCTTTCCTTGTACT 58.584 36.000 0.00 0.00 0.00 2.73
1919 2572 5.582550 GGAACTGTCTTTGTTCTTTCCTTG 58.417 41.667 0.00 0.00 42.27 3.61
1934 2589 1.654105 CGATTGTACTGCGGAACTGTC 59.346 52.381 0.00 0.00 0.00 3.51
1947 2602 3.963129 AGGAAAATCTTGGGCGATTGTA 58.037 40.909 0.00 0.00 34.07 2.41
1955 2610 8.504812 TTTCAAAAGAAAAGGAAAATCTTGGG 57.495 30.769 0.00 0.00 33.86 4.12
1967 2622 5.175673 GGTCGATTGCCTTTCAAAAGAAAAG 59.824 40.000 4.06 0.00 38.34 2.27
1969 2624 4.098654 TGGTCGATTGCCTTTCAAAAGAAA 59.901 37.500 4.06 0.00 38.34 2.52
1971 2626 3.218453 TGGTCGATTGCCTTTCAAAAGA 58.782 40.909 4.06 0.00 38.34 2.52
1972 2627 3.641437 TGGTCGATTGCCTTTCAAAAG 57.359 42.857 0.00 0.00 38.34 2.27
1977 2632 5.060446 CGTAATTTTTGGTCGATTGCCTTTC 59.940 40.000 0.00 0.00 0.00 2.62
1989 2652 6.096282 CCCTTCATGTATCCGTAATTTTTGGT 59.904 38.462 0.00 0.00 0.00 3.67
1994 2657 3.813166 CGCCCTTCATGTATCCGTAATTT 59.187 43.478 0.00 0.00 0.00 1.82
2009 2672 1.352156 CTAACACGCTCACGCCCTTC 61.352 60.000 0.00 0.00 45.53 3.46
2029 2692 3.792053 GACCTCATGTAGCCCGGCG 62.792 68.421 3.05 0.00 0.00 6.46
2032 2695 0.179100 CACAGACCTCATGTAGCCCG 60.179 60.000 0.00 0.00 0.00 6.13
2033 2696 0.179000 CCACAGACCTCATGTAGCCC 59.821 60.000 0.00 0.00 0.00 5.19
2034 2697 0.179000 CCCACAGACCTCATGTAGCC 59.821 60.000 0.00 0.00 0.00 3.93
2035 2698 1.137872 CTCCCACAGACCTCATGTAGC 59.862 57.143 0.00 0.00 0.00 3.58
2036 2699 2.167281 CACTCCCACAGACCTCATGTAG 59.833 54.545 0.00 0.00 0.00 2.74
2037 2700 2.179427 CACTCCCACAGACCTCATGTA 58.821 52.381 0.00 0.00 0.00 2.29
2038 2701 0.979665 CACTCCCACAGACCTCATGT 59.020 55.000 0.00 0.00 0.00 3.21
2039 2702 0.392193 GCACTCCCACAGACCTCATG 60.392 60.000 0.00 0.00 0.00 3.07
2040 2703 1.892819 CGCACTCCCACAGACCTCAT 61.893 60.000 0.00 0.00 0.00 2.90
2041 2704 2.574018 CGCACTCCCACAGACCTCA 61.574 63.158 0.00 0.00 0.00 3.86
2042 2705 2.262915 CGCACTCCCACAGACCTC 59.737 66.667 0.00 0.00 0.00 3.85
2043 2706 4.008933 GCGCACTCCCACAGACCT 62.009 66.667 0.30 0.00 0.00 3.85
2056 2719 4.912485 TTTTCGTCCCACCGCGCA 62.912 61.111 8.75 0.00 0.00 6.09
2057 2720 2.844224 GATTTTTCGTCCCACCGCGC 62.844 60.000 0.00 0.00 0.00 6.86
2058 2721 1.133869 GATTTTTCGTCCCACCGCG 59.866 57.895 0.00 0.00 0.00 6.46
2059 2722 1.504900 GGATTTTTCGTCCCACCGC 59.495 57.895 0.00 0.00 0.00 5.68
2065 2728 0.380733 GCATCCGGGATTTTTCGTCC 59.619 55.000 6.84 0.00 34.92 4.79
2066 2729 1.091537 TGCATCCGGGATTTTTCGTC 58.908 50.000 6.84 0.00 0.00 4.20
2067 2730 1.676006 GATGCATCCGGGATTTTTCGT 59.324 47.619 16.23 0.00 0.00 3.85
2068 2731 1.675483 TGATGCATCCGGGATTTTTCG 59.325 47.619 23.67 0.00 0.00 3.46
2069 2732 2.689983 ACTGATGCATCCGGGATTTTTC 59.310 45.455 23.67 4.98 0.00 2.29
2070 2733 2.428171 CACTGATGCATCCGGGATTTTT 59.572 45.455 23.67 0.00 0.00 1.94
2071 2734 2.026641 CACTGATGCATCCGGGATTTT 58.973 47.619 23.67 0.00 0.00 1.82
2072 2735 1.064463 ACACTGATGCATCCGGGATTT 60.064 47.619 25.06 1.87 0.00 2.17
2073 2736 0.548031 ACACTGATGCATCCGGGATT 59.452 50.000 25.06 2.60 0.00 3.01
2074 2737 1.070758 GTACACTGATGCATCCGGGAT 59.929 52.381 25.06 12.57 0.00 3.85
2075 2738 0.464036 GTACACTGATGCATCCGGGA 59.536 55.000 25.06 8.60 0.00 5.14
2076 2739 0.532862 GGTACACTGATGCATCCGGG 60.533 60.000 23.67 20.65 0.00 5.73
2077 2740 0.177836 TGGTACACTGATGCATCCGG 59.822 55.000 23.67 17.73 0.00 5.14
2078 2741 1.665679 GTTGGTACACTGATGCATCCG 59.334 52.381 23.67 19.58 39.29 4.18
2079 2742 2.939103 GAGTTGGTACACTGATGCATCC 59.061 50.000 23.67 7.79 39.29 3.51
2080 2743 2.939103 GGAGTTGGTACACTGATGCATC 59.061 50.000 20.14 20.14 39.29 3.91
2081 2744 2.356125 GGGAGTTGGTACACTGATGCAT 60.356 50.000 0.00 0.00 39.29 3.96
2082 2745 1.003118 GGGAGTTGGTACACTGATGCA 59.997 52.381 0.00 0.00 39.29 3.96
2083 2746 1.679032 GGGGAGTTGGTACACTGATGC 60.679 57.143 0.00 0.00 39.29 3.91
2084 2747 1.909302 AGGGGAGTTGGTACACTGATG 59.091 52.381 0.00 0.00 39.29 3.07
2085 2748 2.344093 AGGGGAGTTGGTACACTGAT 57.656 50.000 0.00 0.00 39.29 2.90
2086 2749 2.112279 AAGGGGAGTTGGTACACTGA 57.888 50.000 0.00 0.00 39.29 3.41
2087 2750 2.951229 AAAGGGGAGTTGGTACACTG 57.049 50.000 0.00 0.00 39.29 3.66
2088 2751 3.838903 CTCTAAAGGGGAGTTGGTACACT 59.161 47.826 0.00 0.00 39.29 3.55
2089 2752 3.619242 GCTCTAAAGGGGAGTTGGTACAC 60.619 52.174 0.00 0.00 39.29 2.90
2090 2753 2.570302 GCTCTAAAGGGGAGTTGGTACA 59.430 50.000 0.00 0.00 33.73 2.90
2091 2754 2.570302 TGCTCTAAAGGGGAGTTGGTAC 59.430 50.000 0.00 0.00 33.73 3.34
2092 2755 2.910544 TGCTCTAAAGGGGAGTTGGTA 58.089 47.619 0.00 0.00 33.73 3.25
2093 2756 1.742308 TGCTCTAAAGGGGAGTTGGT 58.258 50.000 0.00 0.00 33.73 3.67
2094 2757 2.507471 AGATGCTCTAAAGGGGAGTTGG 59.493 50.000 0.00 0.00 33.73 3.77
2095 2758 3.922171 AGATGCTCTAAAGGGGAGTTG 57.078 47.619 0.00 0.00 33.73 3.16
2096 2759 6.143915 TGTATAGATGCTCTAAAGGGGAGTT 58.856 40.000 0.00 0.00 31.96 3.01
2097 2760 5.716979 TGTATAGATGCTCTAAAGGGGAGT 58.283 41.667 0.00 0.00 31.96 3.85
2098 2761 6.127196 GGATGTATAGATGCTCTAAAGGGGAG 60.127 46.154 0.00 0.00 31.96 4.30
2099 2762 5.721960 GGATGTATAGATGCTCTAAAGGGGA 59.278 44.000 0.00 0.00 31.96 4.81
2100 2763 5.394663 CGGATGTATAGATGCTCTAAAGGGG 60.395 48.000 0.00 0.00 31.96 4.79
2101 2764 5.394663 CCGGATGTATAGATGCTCTAAAGGG 60.395 48.000 0.00 0.00 31.96 3.95
2102 2765 5.394663 CCCGGATGTATAGATGCTCTAAAGG 60.395 48.000 0.73 0.00 31.96 3.11
2103 2766 5.186021 ACCCGGATGTATAGATGCTCTAAAG 59.814 44.000 0.73 0.00 31.96 1.85
2104 2767 5.047306 CACCCGGATGTATAGATGCTCTAAA 60.047 44.000 0.73 0.00 31.96 1.85
2105 2768 4.462834 CACCCGGATGTATAGATGCTCTAA 59.537 45.833 0.73 0.00 31.96 2.10
2106 2769 4.017126 CACCCGGATGTATAGATGCTCTA 58.983 47.826 0.73 0.00 32.87 2.43
2107 2770 2.828520 CACCCGGATGTATAGATGCTCT 59.171 50.000 0.73 0.00 0.00 4.09
2108 2771 2.093973 CCACCCGGATGTATAGATGCTC 60.094 54.545 0.73 0.00 0.00 4.26
2109 2772 1.902508 CCACCCGGATGTATAGATGCT 59.097 52.381 0.73 0.00 0.00 3.79
2110 2773 1.676014 GCCACCCGGATGTATAGATGC 60.676 57.143 0.73 0.00 0.00 3.91
2111 2774 1.066143 GGCCACCCGGATGTATAGATG 60.066 57.143 0.73 0.00 0.00 2.90
2112 2775 1.276622 GGCCACCCGGATGTATAGAT 58.723 55.000 0.73 0.00 0.00 1.98
2113 2776 0.834687 GGGCCACCCGGATGTATAGA 60.835 60.000 0.73 0.00 32.13 1.98
2114 2777 1.677552 GGGCCACCCGGATGTATAG 59.322 63.158 0.73 0.00 32.13 1.31
2115 2778 3.894832 GGGCCACCCGGATGTATA 58.105 61.111 0.73 0.00 32.13 1.47
2125 2788 2.414658 TTAGACGGGTTTGGGCCACC 62.415 60.000 5.23 4.84 37.24 4.61
2126 2789 0.537828 TTTAGACGGGTTTGGGCCAC 60.538 55.000 5.23 0.00 0.00 5.01
2127 2790 0.185416 TTTTAGACGGGTTTGGGCCA 59.815 50.000 0.00 0.00 0.00 5.36
2128 2791 0.599558 GTTTTAGACGGGTTTGGGCC 59.400 55.000 0.00 0.00 0.00 5.80
2129 2792 1.320507 TGTTTTAGACGGGTTTGGGC 58.679 50.000 0.00 0.00 0.00 5.36
2130 2793 3.365565 CGAATGTTTTAGACGGGTTTGGG 60.366 47.826 0.00 0.00 0.00 4.12
2131 2794 3.365565 CCGAATGTTTTAGACGGGTTTGG 60.366 47.826 0.00 0.00 39.92 3.28
2132 2795 3.499157 TCCGAATGTTTTAGACGGGTTTG 59.501 43.478 0.00 0.00 43.14 2.93
2133 2796 3.499537 GTCCGAATGTTTTAGACGGGTTT 59.500 43.478 0.00 0.00 43.14 3.27
2134 2797 3.069289 GTCCGAATGTTTTAGACGGGTT 58.931 45.455 0.00 0.00 43.14 4.11
2135 2798 2.691927 GTCCGAATGTTTTAGACGGGT 58.308 47.619 0.00 0.00 43.14 5.28
2136 2799 1.657094 CGTCCGAATGTTTTAGACGGG 59.343 52.381 0.00 0.00 44.86 5.28
2139 2802 2.669924 GGACCGTCCGAATGTTTTAGAC 59.330 50.000 0.65 0.00 0.00 2.59
2140 2803 2.299582 TGGACCGTCCGAATGTTTTAGA 59.700 45.455 13.02 0.00 40.17 2.10
2141 2804 2.690786 TGGACCGTCCGAATGTTTTAG 58.309 47.619 13.02 0.00 40.17 1.85
2142 2805 2.835580 TGGACCGTCCGAATGTTTTA 57.164 45.000 13.02 0.00 40.17 1.52
2143 2806 2.081462 GATGGACCGTCCGAATGTTTT 58.919 47.619 13.02 0.00 40.17 2.43
2144 2807 1.677820 GGATGGACCGTCCGAATGTTT 60.678 52.381 17.19 0.00 40.17 2.83
2145 2808 0.107848 GGATGGACCGTCCGAATGTT 60.108 55.000 17.19 0.00 40.17 2.71
2146 2809 0.976073 AGGATGGACCGTCCGAATGT 60.976 55.000 24.37 6.37 43.76 2.71
2147 2810 0.530650 CAGGATGGACCGTCCGAATG 60.531 60.000 24.37 15.05 43.76 2.67
2148 2811 0.976073 ACAGGATGGACCGTCCGAAT 60.976 55.000 24.37 12.74 43.76 3.34
2149 2812 1.601419 GACAGGATGGACCGTCCGAA 61.601 60.000 24.37 0.00 43.76 4.30
2150 2813 2.036731 ACAGGATGGACCGTCCGA 59.963 61.111 24.37 2.86 43.76 4.55
2151 2814 1.676678 ATGACAGGATGGACCGTCCG 61.677 60.000 24.37 20.67 43.76 4.79
2152 2815 0.541863 AATGACAGGATGGACCGTCC 59.458 55.000 23.53 23.53 43.62 4.79
2153 2816 1.207089 TCAATGACAGGATGGACCGTC 59.793 52.381 4.99 4.99 43.62 4.79
2154 2817 1.066143 GTCAATGACAGGATGGACCGT 60.066 52.381 8.74 0.00 43.62 4.83
2155 2818 1.656652 GTCAATGACAGGATGGACCG 58.343 55.000 8.74 0.00 43.62 4.79
2156 2819 1.561542 AGGTCAATGACAGGATGGACC 59.438 52.381 15.86 0.00 43.62 4.46
2157 2820 2.026822 ACAGGTCAATGACAGGATGGAC 60.027 50.000 15.86 0.00 43.62 4.02
2158 2821 2.237143 GACAGGTCAATGACAGGATGGA 59.763 50.000 15.86 0.00 43.62 3.41
2159 2822 2.026915 TGACAGGTCAATGACAGGATGG 60.027 50.000 15.86 0.35 37.19 3.51
2160 2823 3.005554 GTGACAGGTCAATGACAGGATG 58.994 50.000 15.86 10.05 41.85 3.51
2161 2824 2.354103 CGTGACAGGTCAATGACAGGAT 60.354 50.000 15.86 0.00 41.85 3.24
2162 2825 1.000843 CGTGACAGGTCAATGACAGGA 59.999 52.381 15.86 0.00 41.85 3.86
2163 2826 1.432514 CGTGACAGGTCAATGACAGG 58.567 55.000 15.86 8.69 41.85 4.00
2164 2827 1.000843 TCCGTGACAGGTCAATGACAG 59.999 52.381 15.86 9.40 41.85 3.51
2165 2828 1.044611 TCCGTGACAGGTCAATGACA 58.955 50.000 15.86 0.00 41.85 3.58
2166 2829 2.163818 TTCCGTGACAGGTCAATGAC 57.836 50.000 4.51 4.51 41.85 3.06
2167 2830 3.417069 AATTCCGTGACAGGTCAATGA 57.583 42.857 3.28 1.19 41.85 2.57
2168 2831 3.424829 CGAAATTCCGTGACAGGTCAATG 60.425 47.826 3.28 0.13 41.85 2.82
2169 2832 2.742053 CGAAATTCCGTGACAGGTCAAT 59.258 45.455 3.28 0.00 41.85 2.57
2170 2833 2.139917 CGAAATTCCGTGACAGGTCAA 58.860 47.619 3.28 0.00 41.85 3.18
2171 2834 1.341852 TCGAAATTCCGTGACAGGTCA 59.658 47.619 0.00 0.00 37.24 4.02
2172 2835 1.725164 GTCGAAATTCCGTGACAGGTC 59.275 52.381 0.00 0.00 0.00 3.85
2173 2836 1.343465 AGTCGAAATTCCGTGACAGGT 59.657 47.619 0.00 0.00 33.83 4.00
2174 2837 2.080286 AGTCGAAATTCCGTGACAGG 57.920 50.000 0.00 0.00 33.83 4.00
2175 2838 4.323868 GTCTAAGTCGAAATTCCGTGACAG 59.676 45.833 0.00 0.00 33.83 3.51
2176 2839 4.232221 GTCTAAGTCGAAATTCCGTGACA 58.768 43.478 0.00 0.00 33.83 3.58
2177 2840 4.232221 TGTCTAAGTCGAAATTCCGTGAC 58.768 43.478 0.00 0.00 0.00 3.67
2178 2841 4.482386 CTGTCTAAGTCGAAATTCCGTGA 58.518 43.478 0.00 0.00 0.00 4.35
2179 2842 3.612860 CCTGTCTAAGTCGAAATTCCGTG 59.387 47.826 0.00 0.00 0.00 4.94
2180 2843 3.846360 CCTGTCTAAGTCGAAATTCCGT 58.154 45.455 0.00 0.00 0.00 4.69
2181 2844 2.603560 GCCTGTCTAAGTCGAAATTCCG 59.396 50.000 0.00 0.00 0.00 4.30
2182 2845 3.863041 AGCCTGTCTAAGTCGAAATTCC 58.137 45.455 0.00 0.00 0.00 3.01
2183 2846 5.172205 AGAAGCCTGTCTAAGTCGAAATTC 58.828 41.667 0.00 0.00 0.00 2.17
2184 2847 5.153950 AGAAGCCTGTCTAAGTCGAAATT 57.846 39.130 0.00 0.00 0.00 1.82
2185 2848 4.810191 AGAAGCCTGTCTAAGTCGAAAT 57.190 40.909 0.00 0.00 0.00 2.17
2186 2849 4.602340 AAGAAGCCTGTCTAAGTCGAAA 57.398 40.909 0.00 0.00 0.00 3.46
2187 2850 5.717078 TTAAGAAGCCTGTCTAAGTCGAA 57.283 39.130 0.00 0.00 0.00 3.71
2188 2851 5.717078 TTTAAGAAGCCTGTCTAAGTCGA 57.283 39.130 0.00 0.00 0.00 4.20
2189 2852 7.306866 GCATATTTAAGAAGCCTGTCTAAGTCG 60.307 40.741 0.00 0.00 0.00 4.18
2190 2853 7.041712 GGCATATTTAAGAAGCCTGTCTAAGTC 60.042 40.741 0.00 0.00 42.01 3.01
2191 2854 6.768381 GGCATATTTAAGAAGCCTGTCTAAGT 59.232 38.462 0.00 0.00 42.01 2.24
2192 2855 7.195839 GGCATATTTAAGAAGCCTGTCTAAG 57.804 40.000 0.00 0.00 42.01 2.18
2200 2863 5.693555 GCATTTGAGGCATATTTAAGAAGCC 59.306 40.000 0.00 0.00 45.54 4.35
2201 2864 6.510536 AGCATTTGAGGCATATTTAAGAAGC 58.489 36.000 0.00 0.00 0.00 3.86
2202 2865 7.709947 TGAGCATTTGAGGCATATTTAAGAAG 58.290 34.615 0.00 0.00 0.00 2.85
2203 2866 7.643569 TGAGCATTTGAGGCATATTTAAGAA 57.356 32.000 0.00 0.00 0.00 2.52
2204 2867 7.643569 TTGAGCATTTGAGGCATATTTAAGA 57.356 32.000 0.00 0.00 0.00 2.10
2205 2868 8.882415 ATTTGAGCATTTGAGGCATATTTAAG 57.118 30.769 0.00 0.00 0.00 1.85
2206 2869 9.748708 GTATTTGAGCATTTGAGGCATATTTAA 57.251 29.630 0.00 0.00 0.00 1.52
2207 2870 8.075574 CGTATTTGAGCATTTGAGGCATATTTA 58.924 33.333 0.00 0.00 0.00 1.40
2208 2871 6.919662 CGTATTTGAGCATTTGAGGCATATTT 59.080 34.615 0.00 0.00 0.00 1.40
2209 2872 6.441274 CGTATTTGAGCATTTGAGGCATATT 58.559 36.000 0.00 0.00 0.00 1.28
2210 2873 5.048504 CCGTATTTGAGCATTTGAGGCATAT 60.049 40.000 0.00 0.00 0.00 1.78
2211 2874 4.275689 CCGTATTTGAGCATTTGAGGCATA 59.724 41.667 0.00 0.00 0.00 3.14
2212 2875 3.067180 CCGTATTTGAGCATTTGAGGCAT 59.933 43.478 0.00 0.00 0.00 4.40
2213 2876 2.423185 CCGTATTTGAGCATTTGAGGCA 59.577 45.455 0.00 0.00 0.00 4.75
2214 2877 2.682856 TCCGTATTTGAGCATTTGAGGC 59.317 45.455 0.00 0.00 0.00 4.70
2215 2878 4.662145 GTTCCGTATTTGAGCATTTGAGG 58.338 43.478 0.00 0.00 0.00 3.86
2216 2879 4.334443 CGTTCCGTATTTGAGCATTTGAG 58.666 43.478 0.00 0.00 0.00 3.02
2217 2880 3.126171 CCGTTCCGTATTTGAGCATTTGA 59.874 43.478 0.00 0.00 0.00 2.69
2218 2881 3.425404 CCGTTCCGTATTTGAGCATTTG 58.575 45.455 0.00 0.00 0.00 2.32
2219 2882 2.422127 CCCGTTCCGTATTTGAGCATTT 59.578 45.455 0.00 0.00 0.00 2.32
2220 2883 2.014128 CCCGTTCCGTATTTGAGCATT 58.986 47.619 0.00 0.00 0.00 3.56
2221 2884 1.065709 ACCCGTTCCGTATTTGAGCAT 60.066 47.619 0.00 0.00 0.00 3.79
2222 2885 0.322322 ACCCGTTCCGTATTTGAGCA 59.678 50.000 0.00 0.00 0.00 4.26
2223 2886 1.445871 AACCCGTTCCGTATTTGAGC 58.554 50.000 0.00 0.00 0.00 4.26
2224 2887 2.160813 CCAAACCCGTTCCGTATTTGAG 59.839 50.000 9.88 0.81 34.18 3.02
2225 2888 2.152830 CCAAACCCGTTCCGTATTTGA 58.847 47.619 9.88 0.00 34.18 2.69
2226 2889 2.152830 TCCAAACCCGTTCCGTATTTG 58.847 47.619 0.00 0.00 33.01 2.32
2227 2890 2.565046 TCCAAACCCGTTCCGTATTT 57.435 45.000 0.00 0.00 0.00 1.40
2228 2891 2.429478 CTTCCAAACCCGTTCCGTATT 58.571 47.619 0.00 0.00 0.00 1.89
2229 2892 1.339342 CCTTCCAAACCCGTTCCGTAT 60.339 52.381 0.00 0.00 0.00 3.06
2230 2893 0.035176 CCTTCCAAACCCGTTCCGTA 59.965 55.000 0.00 0.00 0.00 4.02
2231 2894 1.228033 CCTTCCAAACCCGTTCCGT 60.228 57.895 0.00 0.00 0.00 4.69
2232 2895 1.969589 CCCTTCCAAACCCGTTCCG 60.970 63.158 0.00 0.00 0.00 4.30
2233 2896 1.605451 CCCCTTCCAAACCCGTTCC 60.605 63.158 0.00 0.00 0.00 3.62
2234 2897 2.273179 GCCCCTTCCAAACCCGTTC 61.273 63.158 0.00 0.00 0.00 3.95
2235 2898 2.203582 GCCCCTTCCAAACCCGTT 60.204 61.111 0.00 0.00 0.00 4.44
2236 2899 4.653888 CGCCCCTTCCAAACCCGT 62.654 66.667 0.00 0.00 0.00 5.28
2272 2935 4.530857 GATGGGGTCGGGCTGTCG 62.531 72.222 0.00 0.00 0.00 4.35
2273 2936 4.530857 CGATGGGGTCGGGCTGTC 62.531 72.222 0.00 0.00 46.47 3.51
2281 2944 1.338020 GATGCAATTTCCGATGGGGTC 59.662 52.381 0.00 0.00 37.00 4.46
2282 2945 1.341877 TGATGCAATTTCCGATGGGGT 60.342 47.619 0.00 0.00 37.00 4.95
2283 2946 1.401761 TGATGCAATTTCCGATGGGG 58.598 50.000 0.00 0.00 37.02 4.96
2284 2947 3.523606 TTTGATGCAATTTCCGATGGG 57.476 42.857 0.00 0.00 0.00 4.00
2285 2948 4.940463 AGATTTGATGCAATTTCCGATGG 58.060 39.130 0.00 0.00 0.00 3.51
2286 2949 7.364970 TGATAGATTTGATGCAATTTCCGATG 58.635 34.615 0.00 0.00 0.00 3.84
2287 2950 7.514784 TGATAGATTTGATGCAATTTCCGAT 57.485 32.000 0.00 0.00 0.00 4.18
2288 2951 6.940831 TGATAGATTTGATGCAATTTCCGA 57.059 33.333 0.00 0.00 0.00 4.55
2289 2952 7.043192 GGTTTGATAGATTTGATGCAATTTCCG 60.043 37.037 0.00 0.00 0.00 4.30
2290 2953 7.225341 GGGTTTGATAGATTTGATGCAATTTCC 59.775 37.037 0.00 0.00 0.00 3.13
2291 2954 7.983484 AGGGTTTGATAGATTTGATGCAATTTC 59.017 33.333 0.00 0.00 0.00 2.17
2292 2955 7.854337 AGGGTTTGATAGATTTGATGCAATTT 58.146 30.769 0.00 0.00 0.00 1.82
2293 2956 7.427989 AGGGTTTGATAGATTTGATGCAATT 57.572 32.000 0.00 0.00 0.00 2.32
2294 2957 7.418254 GGAAGGGTTTGATAGATTTGATGCAAT 60.418 37.037 0.00 0.00 0.00 3.56
2295 2958 6.127366 GGAAGGGTTTGATAGATTTGATGCAA 60.127 38.462 0.00 0.00 0.00 4.08
2296 2959 5.360714 GGAAGGGTTTGATAGATTTGATGCA 59.639 40.000 0.00 0.00 0.00 3.96
2297 2960 5.595952 AGGAAGGGTTTGATAGATTTGATGC 59.404 40.000 0.00 0.00 0.00 3.91
2298 2961 6.264067 GGAGGAAGGGTTTGATAGATTTGATG 59.736 42.308 0.00 0.00 0.00 3.07
2299 2962 6.161170 AGGAGGAAGGGTTTGATAGATTTGAT 59.839 38.462 0.00 0.00 0.00 2.57
2300 2963 5.492524 AGGAGGAAGGGTTTGATAGATTTGA 59.507 40.000 0.00 0.00 0.00 2.69
2301 2964 5.760131 AGGAGGAAGGGTTTGATAGATTTG 58.240 41.667 0.00 0.00 0.00 2.32
2302 2965 5.103898 GGAGGAGGAAGGGTTTGATAGATTT 60.104 44.000 0.00 0.00 0.00 2.17
2303 2966 4.413851 GGAGGAGGAAGGGTTTGATAGATT 59.586 45.833 0.00 0.00 0.00 2.40
2304 2967 3.977326 GGAGGAGGAAGGGTTTGATAGAT 59.023 47.826 0.00 0.00 0.00 1.98
2305 2968 3.014110 AGGAGGAGGAAGGGTTTGATAGA 59.986 47.826 0.00 0.00 0.00 1.98
2306 2969 3.388913 AGGAGGAGGAAGGGTTTGATAG 58.611 50.000 0.00 0.00 0.00 2.08
2307 2970 3.385115 GAGGAGGAGGAAGGGTTTGATA 58.615 50.000 0.00 0.00 0.00 2.15
2308 2971 2.200955 GAGGAGGAGGAAGGGTTTGAT 58.799 52.381 0.00 0.00 0.00 2.57
2309 2972 1.657804 GAGGAGGAGGAAGGGTTTGA 58.342 55.000 0.00 0.00 0.00 2.69
2310 2973 0.621082 GGAGGAGGAGGAAGGGTTTG 59.379 60.000 0.00 0.00 0.00 2.93
2311 2974 0.550393 GGGAGGAGGAGGAAGGGTTT 60.550 60.000 0.00 0.00 0.00 3.27
2312 2975 1.083141 GGGAGGAGGAGGAAGGGTT 59.917 63.158 0.00 0.00 0.00 4.11
2313 2976 1.869452 AGGGAGGAGGAGGAAGGGT 60.869 63.158 0.00 0.00 0.00 4.34
2314 2977 1.074850 GAGGGAGGAGGAGGAAGGG 60.075 68.421 0.00 0.00 0.00 3.95
2315 2978 1.074850 GGAGGGAGGAGGAGGAAGG 60.075 68.421 0.00 0.00 0.00 3.46
2316 2979 1.074850 GGGAGGGAGGAGGAGGAAG 60.075 68.421 0.00 0.00 0.00 3.46
2317 2980 2.647949 GGGGAGGGAGGAGGAGGAA 61.648 68.421 0.00 0.00 0.00 3.36
2318 2981 3.036959 GGGGAGGGAGGAGGAGGA 61.037 72.222 0.00 0.00 0.00 3.71
2319 2982 4.179599 GGGGGAGGGAGGAGGAGG 62.180 77.778 0.00 0.00 0.00 4.30
2320 2983 3.039526 AGGGGGAGGGAGGAGGAG 61.040 72.222 0.00 0.00 0.00 3.69
2321 2984 3.036959 GAGGGGGAGGGAGGAGGA 61.037 72.222 0.00 0.00 0.00 3.71
2322 2985 4.179599 GGAGGGGGAGGGAGGAGG 62.180 77.778 0.00 0.00 0.00 4.30
2323 2986 2.960879 TTGGAGGGGGAGGGAGGAG 61.961 68.421 0.00 0.00 0.00 3.69
2324 2987 2.879490 TTGGAGGGGGAGGGAGGA 60.879 66.667 0.00 0.00 0.00 3.71
2325 2988 2.692741 GTTGGAGGGGGAGGGAGG 60.693 72.222 0.00 0.00 0.00 4.30
2326 2989 2.692741 GGTTGGAGGGGGAGGGAG 60.693 72.222 0.00 0.00 0.00 4.30
2327 2990 2.370257 AAAGGTTGGAGGGGGAGGGA 62.370 60.000 0.00 0.00 0.00 4.20
2328 2991 1.857348 AAAGGTTGGAGGGGGAGGG 60.857 63.158 0.00 0.00 0.00 4.30
2329 2992 1.691823 GAAAGGTTGGAGGGGGAGG 59.308 63.158 0.00 0.00 0.00 4.30
2330 2993 1.691823 GGAAAGGTTGGAGGGGGAG 59.308 63.158 0.00 0.00 0.00 4.30
2331 2994 1.855451 GGGAAAGGTTGGAGGGGGA 60.855 63.158 0.00 0.00 0.00 4.81
2332 2995 2.770827 GGGAAAGGTTGGAGGGGG 59.229 66.667 0.00 0.00 0.00 5.40
2333 2996 2.355115 CGGGAAAGGTTGGAGGGG 59.645 66.667 0.00 0.00 0.00 4.79
2334 2997 2.361230 GCGGGAAAGGTTGGAGGG 60.361 66.667 0.00 0.00 0.00 4.30
2335 2998 2.746277 CGCGGGAAAGGTTGGAGG 60.746 66.667 0.00 0.00 0.00 4.30
2336 2999 3.431725 GCGCGGGAAAGGTTGGAG 61.432 66.667 8.83 0.00 0.00 3.86
2337 3000 3.894547 GAGCGCGGGAAAGGTTGGA 62.895 63.158 8.83 0.00 0.00 3.53
2338 3001 3.431725 GAGCGCGGGAAAGGTTGG 61.432 66.667 8.83 0.00 0.00 3.77
2339 3002 3.788766 CGAGCGCGGGAAAGGTTG 61.789 66.667 8.83 0.00 0.00 3.77
2340 3003 3.934391 CTCGAGCGCGGGAAAGGTT 62.934 63.158 2.50 0.00 41.67 3.50
2341 3004 4.436998 CTCGAGCGCGGGAAAGGT 62.437 66.667 2.50 0.00 41.67 3.50
2365 3028 4.335647 AGCAAGGGTGGCAGACGG 62.336 66.667 0.00 0.00 0.00 4.79
2366 3029 2.743928 GAGCAAGGGTGGCAGACG 60.744 66.667 0.00 0.00 0.00 4.18
2367 3030 2.360475 GGAGCAAGGGTGGCAGAC 60.360 66.667 0.00 0.00 0.00 3.51
2368 3031 3.650950 GGGAGCAAGGGTGGCAGA 61.651 66.667 0.00 0.00 0.00 4.26
2369 3032 4.748144 GGGGAGCAAGGGTGGCAG 62.748 72.222 0.00 0.00 0.00 4.85
2371 3034 4.066139 ATGGGGAGCAAGGGTGGC 62.066 66.667 0.00 0.00 0.00 5.01
2372 3035 2.276740 GATGGGGAGCAAGGGTGG 59.723 66.667 0.00 0.00 0.00 4.61
2373 3036 2.276309 GAGGATGGGGAGCAAGGGTG 62.276 65.000 0.00 0.00 0.00 4.61
2374 3037 2.003548 GAGGATGGGGAGCAAGGGT 61.004 63.158 0.00 0.00 0.00 4.34
2375 3038 1.358830 ATGAGGATGGGGAGCAAGGG 61.359 60.000 0.00 0.00 0.00 3.95
2376 3039 0.110104 GATGAGGATGGGGAGCAAGG 59.890 60.000 0.00 0.00 0.00 3.61
2377 3040 0.841961 TGATGAGGATGGGGAGCAAG 59.158 55.000 0.00 0.00 0.00 4.01
2378 3041 0.548031 GTGATGAGGATGGGGAGCAA 59.452 55.000 0.00 0.00 0.00 3.91
2379 3042 0.621280 TGTGATGAGGATGGGGAGCA 60.621 55.000 0.00 0.00 0.00 4.26
2380 3043 0.108207 CTGTGATGAGGATGGGGAGC 59.892 60.000 0.00 0.00 0.00 4.70
2381 3044 0.763652 CCTGTGATGAGGATGGGGAG 59.236 60.000 0.00 0.00 34.69 4.30
2382 3045 0.044702 ACCTGTGATGAGGATGGGGA 59.955 55.000 0.00 0.00 36.51 4.81
2383 3046 0.471617 GACCTGTGATGAGGATGGGG 59.528 60.000 0.00 0.00 36.51 4.96
2384 3047 1.415659 GAGACCTGTGATGAGGATGGG 59.584 57.143 0.00 0.00 36.51 4.00
2385 3048 1.068281 CGAGACCTGTGATGAGGATGG 59.932 57.143 0.00 0.00 36.51 3.51
2386 3049 2.027385 TCGAGACCTGTGATGAGGATG 58.973 52.381 0.00 0.00 36.51 3.51
2387 3050 2.443958 TCGAGACCTGTGATGAGGAT 57.556 50.000 0.00 0.00 36.51 3.24
2388 3051 2.302260 GATCGAGACCTGTGATGAGGA 58.698 52.381 0.00 0.00 36.51 3.71
2389 3052 1.339610 GGATCGAGACCTGTGATGAGG 59.660 57.143 4.47 0.00 39.28 3.86
2390 3053 2.027385 TGGATCGAGACCTGTGATGAG 58.973 52.381 11.72 0.00 0.00 2.90
2391 3054 2.143876 TGGATCGAGACCTGTGATGA 57.856 50.000 11.72 0.00 0.00 2.92
2392 3055 3.023946 GATGGATCGAGACCTGTGATG 57.976 52.381 11.72 0.00 0.00 3.07
2405 3068 2.355132 ACGATATCTACGGCGATGGATC 59.645 50.000 16.62 8.57 34.93 3.36
2406 3069 2.355132 GACGATATCTACGGCGATGGAT 59.645 50.000 16.62 15.53 34.93 3.41
2407 3070 1.736126 GACGATATCTACGGCGATGGA 59.264 52.381 16.62 8.84 34.93 3.41
2408 3071 1.202154 GGACGATATCTACGGCGATGG 60.202 57.143 16.62 0.00 39.91 3.51
2409 3072 1.467342 TGGACGATATCTACGGCGATG 59.533 52.381 16.62 5.64 39.91 3.84
2410 3073 1.738350 CTGGACGATATCTACGGCGAT 59.262 52.381 16.62 0.00 39.91 4.58
2411 3074 1.154197 CTGGACGATATCTACGGCGA 58.846 55.000 16.62 0.00 39.91 5.54
2412 3075 0.454620 GCTGGACGATATCTACGGCG 60.455 60.000 4.80 4.80 39.91 6.46
2413 3076 0.109226 GGCTGGACGATATCTACGGC 60.109 60.000 11.38 11.38 38.12 5.68
2414 3077 0.526662 GGGCTGGACGATATCTACGG 59.473 60.000 0.34 0.00 34.93 4.02
2415 3078 0.168348 CGGGCTGGACGATATCTACG 59.832 60.000 0.34 0.00 0.00 3.51
2416 3079 1.199558 GACGGGCTGGACGATATCTAC 59.800 57.143 0.34 0.00 34.93 2.59
2417 3080 1.531423 GACGGGCTGGACGATATCTA 58.469 55.000 0.34 0.00 34.93 1.98
2418 3081 1.179814 GGACGGGCTGGACGATATCT 61.180 60.000 0.34 0.00 34.93 1.98
2419 3082 1.289380 GGACGGGCTGGACGATATC 59.711 63.158 0.00 0.00 34.93 1.63
2420 3083 2.207924 GGGACGGGCTGGACGATAT 61.208 63.158 0.00 0.00 34.93 1.63
2421 3084 2.836360 GGGACGGGCTGGACGATA 60.836 66.667 0.00 0.00 34.93 2.92
2446 3109 1.406219 CGAACTGCATCTCCGTCACG 61.406 60.000 0.00 0.00 0.00 4.35
2447 3110 1.687494 GCGAACTGCATCTCCGTCAC 61.687 60.000 0.00 0.00 45.45 3.67
2448 3111 1.446099 GCGAACTGCATCTCCGTCA 60.446 57.895 0.00 0.00 45.45 4.35
2449 3112 3.389206 GCGAACTGCATCTCCGTC 58.611 61.111 0.00 0.00 45.45 4.79


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.