Multiple sequence alignment - TraesCS5A01G191300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G191300 chr5A 100.000 2582 0 0 1 2582 395761282 395758701 0.000000e+00 4769.0
1 TraesCS5A01G191300 chr5B 90.516 1434 64 29 692 2116 345347419 345348789 0.000000e+00 1829.0
2 TraesCS5A01G191300 chr5B 94.922 256 12 1 154 408 345346861 345347116 1.440000e-107 399.0
3 TraesCS5A01G191300 chr5B 90.000 230 12 5 2263 2492 345348873 345349091 1.170000e-73 287.0
4 TraesCS5A01G191300 chr5B 89.583 192 19 1 505 696 666806770 666806580 2.570000e-60 243.0
5 TraesCS5A01G191300 chr5B 88.060 201 23 1 204 403 64626276 64626076 1.190000e-58 237.0
6 TraesCS5A01G191300 chr5B 88.889 90 5 3 2118 2207 632062571 632062655 3.510000e-19 106.0
7 TraesCS5A01G191300 chr5B 93.846 65 4 0 2516 2580 345461426 345461490 5.880000e-17 99.0
8 TraesCS5A01G191300 chr5B 85.556 90 8 3 2118 2207 661634308 661634224 3.540000e-14 89.8
9 TraesCS5A01G191300 chr5D 89.805 1128 55 25 754 1866 302351996 302353078 0.000000e+00 1391.0
10 TraesCS5A01G191300 chr5D 91.892 259 14 3 2248 2506 302353097 302353348 3.160000e-94 355.0
11 TraesCS5A01G191300 chr5D 90.476 63 6 0 2142 2204 450211029 450211091 1.650000e-12 84.2
12 TraesCS5A01G191300 chr6B 90.206 194 19 0 505 698 225881550 225881357 1.190000e-63 254.0
13 TraesCS5A01G191300 chr6B 86.893 206 26 1 204 408 183611867 183611662 2.000000e-56 230.0
14 TraesCS5A01G191300 chr7A 89.500 200 20 1 211 409 383096191 383095992 4.270000e-63 252.0
15 TraesCS5A01G191300 chr7A 90.000 90 3 4 2118 2206 333024733 333024817 7.550000e-21 111.0
16 TraesCS5A01G191300 chr4B 90.052 191 19 0 505 695 68116751 68116561 5.520000e-62 248.0
17 TraesCS5A01G191300 chr4B 90.811 185 17 0 511 695 530234101 530233917 5.520000e-62 248.0
18 TraesCS5A01G191300 chr4B 90.052 191 19 0 505 695 642538366 642538176 5.520000e-62 248.0
19 TraesCS5A01G191300 chr4B 89.286 196 18 3 510 703 634730500 634730306 2.570000e-60 243.0
20 TraesCS5A01G191300 chr4B 86.957 207 23 3 204 406 622110946 622110740 2.000000e-56 230.0
21 TraesCS5A01G191300 chr4B 89.535 86 4 3 2118 2203 250706568 250706488 1.260000e-18 104.0
22 TraesCS5A01G191300 chr4B 87.209 86 6 3 2118 2203 221000776 221000696 2.740000e-15 93.5
23 TraesCS5A01G191300 chr4B 88.571 70 7 1 2142 2210 498537593 498537662 1.650000e-12 84.2
24 TraesCS5A01G191300 chr1A 90.811 185 17 0 511 695 28408710 28408894 5.520000e-62 248.0
25 TraesCS5A01G191300 chr1A 86.829 205 27 0 204 408 256413183 256413387 2.000000e-56 230.0
26 TraesCS5A01G191300 chr1A 94.615 130 5 2 1 129 3212834 3212706 1.570000e-47 200.0
27 TraesCS5A01G191300 chr1A 94.574 129 7 0 1 129 417772629 417772501 1.570000e-47 200.0
28 TraesCS5A01G191300 chr1A 90.323 62 6 0 2142 2203 424762947 424762886 5.920000e-12 82.4
29 TraesCS5A01G191300 chr1A 87.324 71 9 0 2142 2212 528074987 528074917 5.920000e-12 82.4
30 TraesCS5A01G191300 chr7B 89.583 192 20 0 505 696 388176987 388177178 7.140000e-61 244.0
31 TraesCS5A01G191300 chr7B 88.542 96 6 3 2108 2203 100960654 100960564 7.550000e-21 111.0
32 TraesCS5A01G191300 chr7B 89.655 87 4 3 2118 2204 744049440 744049521 3.510000e-19 106.0
33 TraesCS5A01G191300 chr7B 89.535 86 4 3 2118 2203 548479131 548479051 1.260000e-18 104.0
34 TraesCS5A01G191300 chr7B 86.316 95 8 3 2113 2207 75277636 75277547 5.880000e-17 99.0
35 TraesCS5A01G191300 chrUn 89.175 194 21 0 505 698 239743970 239743777 2.570000e-60 243.0
36 TraesCS5A01G191300 chrUn 94.615 130 5 2 1 129 361075299 361075171 1.570000e-47 200.0
37 TraesCS5A01G191300 chrUn 100.000 33 0 0 2140 2172 328264466 328264434 7.710000e-06 62.1
38 TraesCS5A01G191300 chrUn 100.000 29 0 0 2141 2169 24316135 24316107 1.000000e-03 54.7
39 TraesCS5A01G191300 chrUn 100.000 29 0 0 2141 2169 24354367 24354395 1.000000e-03 54.7
40 TraesCS5A01G191300 chrUn 100.000 29 0 0 2141 2169 288298431 288298403 1.000000e-03 54.7
41 TraesCS5A01G191300 chrUn 100.000 29 0 0 2141 2169 293843248 293843220 1.000000e-03 54.7
42 TraesCS5A01G191300 chr7D 86.538 208 27 1 204 410 149980046 149980253 7.190000e-56 228.0
43 TraesCS5A01G191300 chr7D 91.304 69 6 0 2142 2210 591506109 591506041 7.610000e-16 95.3
44 TraesCS5A01G191300 chr7D 88.000 75 8 1 2142 2215 59993025 59992951 1.270000e-13 87.9
45 TraesCS5A01G191300 chr3D 86.893 206 24 3 205 409 407387491 407387288 7.190000e-56 228.0
46 TraesCS5A01G191300 chr2A 87.129 202 24 1 204 405 9107151 9106952 7.190000e-56 228.0
47 TraesCS5A01G191300 chr6D 94.574 129 7 0 1 129 451746418 451746290 1.570000e-47 200.0
48 TraesCS5A01G191300 chr6D 93.548 62 4 0 2142 2203 433724362 433724301 2.740000e-15 93.5
49 TraesCS5A01G191300 chr6D 97.727 44 1 0 2142 2185 374100779 374100822 2.760000e-10 76.8
50 TraesCS5A01G191300 chr6D 80.247 81 12 4 2146 2224 112434728 112434650 9.980000e-05 58.4
51 TraesCS5A01G191300 chr6A 94.615 130 5 2 1 129 32726503 32726631 1.570000e-47 200.0
52 TraesCS5A01G191300 chr6A 94.615 130 5 2 1 129 32731967 32732095 1.570000e-47 200.0
53 TraesCS5A01G191300 chr6A 90.909 66 5 1 2142 2206 438961842 438961777 1.270000e-13 87.9
54 TraesCS5A01G191300 chr4D 94.574 129 7 0 1 129 223220579 223220707 1.570000e-47 200.0
55 TraesCS5A01G191300 chr4D 95.455 44 2 0 2142 2185 450320056 450320099 1.280000e-08 71.3
56 TraesCS5A01G191300 chr4D 97.436 39 1 0 2146 2184 98451621 98451659 1.660000e-07 67.6
57 TraesCS5A01G191300 chr4D 97.297 37 1 0 2140 2176 370369238 370369274 2.140000e-06 63.9
58 TraesCS5A01G191300 chr1D 94.574 129 7 0 1 129 212041337 212041465 1.570000e-47 200.0
59 TraesCS5A01G191300 chr1D 95.455 44 2 0 2142 2185 166630759 166630802 1.280000e-08 71.3
60 TraesCS5A01G191300 chr1D 97.500 40 1 0 2140 2179 479381062 479381101 4.610000e-08 69.4
61 TraesCS5A01G191300 chr3A 90.345 145 12 2 1 145 528532619 528532477 3.390000e-44 189.0
62 TraesCS5A01G191300 chr4A 89.474 95 3 4 2118 2212 665451161 665451074 2.100000e-21 113.0
63 TraesCS5A01G191300 chr4A 83.019 106 10 6 2109 2213 613419901 613419999 3.540000e-14 89.8
64 TraesCS5A01G191300 chr2B 90.698 86 3 4 2118 2203 69158260 69158180 2.720000e-20 110.0
65 TraesCS5A01G191300 chr2B 89.011 91 4 4 2118 2207 793520540 793520455 9.770000e-20 108.0
66 TraesCS5A01G191300 chr1B 89.286 84 4 4 2120 2203 14136619 14136697 1.630000e-17 100.0
67 TraesCS5A01G191300 chr1B 86.667 90 7 3 2118 2207 435679617 435679533 7.610000e-16 95.3
68 TraesCS5A01G191300 chr1B 86.667 90 7 3 2118 2207 561790968 561790884 7.610000e-16 95.3
69 TraesCS5A01G191300 chr1B 86.047 86 7 4 2118 2203 625046168 625046088 1.270000e-13 87.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G191300 chr5A 395758701 395761282 2581 True 4769.000000 4769 100.000000 1 2582 1 chr5A.!!$R1 2581
1 TraesCS5A01G191300 chr5B 345346861 345349091 2230 False 838.333333 1829 91.812667 154 2492 3 chr5B.!!$F3 2338
2 TraesCS5A01G191300 chr5D 302351996 302353348 1352 False 873.000000 1391 90.848500 754 2506 2 chr5D.!!$F2 1752

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
70 71 0.108041 GTGCATGAATGGGCCCAAAG 60.108 55.0 32.58 17.66 0.0 2.77 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1914 2103 0.321671 CTTTGCGGGGAGAGACAAGA 59.678 55.0 0.0 0.0 0.0 3.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.433306 CAACTTCCATGTGGGGACTAA 57.567 47.619 0.00 0.00 36.46 2.24
21 22 3.761897 CAACTTCCATGTGGGGACTAAA 58.238 45.455 0.00 0.00 36.46 1.85
22 23 3.434940 ACTTCCATGTGGGGACTAAAC 57.565 47.619 0.00 0.00 36.46 2.01
23 24 2.986728 ACTTCCATGTGGGGACTAAACT 59.013 45.455 0.00 0.00 36.46 2.66
24 25 3.397955 ACTTCCATGTGGGGACTAAACTT 59.602 43.478 0.00 0.00 36.46 2.66
25 26 4.141018 ACTTCCATGTGGGGACTAAACTTT 60.141 41.667 0.00 0.00 36.46 2.66
26 27 5.073965 ACTTCCATGTGGGGACTAAACTTTA 59.926 40.000 0.00 0.00 36.46 1.85
27 28 5.174037 TCCATGTGGGGACTAAACTTTAG 57.826 43.478 6.96 6.96 37.22 1.85
28 29 4.600111 TCCATGTGGGGACTAAACTTTAGT 59.400 41.667 13.09 13.09 37.22 2.24
29 30 4.941873 CCATGTGGGGACTAAACTTTAGTC 59.058 45.833 24.83 24.83 42.28 2.59
30 31 5.280521 CCATGTGGGGACTAAACTTTAGTCT 60.281 44.000 28.74 13.93 42.54 3.24
31 32 5.479124 TGTGGGGACTAAACTTTAGTCTC 57.521 43.478 28.74 26.92 42.73 3.36
32 33 4.903049 TGTGGGGACTAAACTTTAGTCTCA 59.097 41.667 30.19 25.25 44.67 3.27
33 34 5.221581 TGTGGGGACTAAACTTTAGTCTCAC 60.222 44.000 30.92 30.92 44.67 3.51
34 35 5.011840 GTGGGGACTAAACTTTAGTCTCACT 59.988 44.000 30.19 5.62 44.67 3.41
35 36 5.245526 TGGGGACTAAACTTTAGTCTCACTC 59.754 44.000 30.19 19.37 44.67 3.51
36 37 5.245526 GGGGACTAAACTTTAGTCTCACTCA 59.754 44.000 30.19 0.00 44.67 3.41
37 38 6.157904 GGGACTAAACTTTAGTCTCACTCAC 58.842 44.000 28.74 16.70 42.92 3.51
38 39 6.015265 GGGACTAAACTTTAGTCTCACTCACT 60.015 42.308 28.74 2.38 42.92 3.41
39 40 7.085746 GGACTAAACTTTAGTCTCACTCACTC 58.914 42.308 28.74 13.61 42.54 3.51
40 41 6.983984 ACTAAACTTTAGTCTCACTCACTCC 58.016 40.000 8.19 0.00 0.00 3.85
41 42 5.871396 AAACTTTAGTCTCACTCACTCCA 57.129 39.130 0.00 0.00 0.00 3.86
42 43 4.857509 ACTTTAGTCTCACTCACTCCAC 57.142 45.455 0.00 0.00 0.00 4.02
43 44 4.475345 ACTTTAGTCTCACTCACTCCACT 58.525 43.478 0.00 0.00 0.00 4.00
44 45 4.521256 ACTTTAGTCTCACTCACTCCACTC 59.479 45.833 0.00 0.00 0.00 3.51
45 46 2.666272 AGTCTCACTCACTCCACTCA 57.334 50.000 0.00 0.00 0.00 3.41
46 47 2.235016 AGTCTCACTCACTCCACTCAC 58.765 52.381 0.00 0.00 0.00 3.51
47 48 1.957177 GTCTCACTCACTCCACTCACA 59.043 52.381 0.00 0.00 0.00 3.58
48 49 2.560542 GTCTCACTCACTCCACTCACAT 59.439 50.000 0.00 0.00 0.00 3.21
49 50 2.560105 TCTCACTCACTCCACTCACATG 59.440 50.000 0.00 0.00 0.00 3.21
50 51 2.298446 CTCACTCACTCCACTCACATGT 59.702 50.000 0.00 0.00 0.00 3.21
51 52 2.036346 TCACTCACTCCACTCACATGTG 59.964 50.000 20.18 20.18 37.66 3.21
52 53 2.042464 ACTCACTCCACTCACATGTGT 58.958 47.619 24.63 4.31 36.30 3.72
53 54 2.224137 ACTCACTCCACTCACATGTGTG 60.224 50.000 24.63 23.70 46.91 3.82
54 55 0.870393 CACTCCACTCACATGTGTGC 59.130 55.000 24.63 0.00 45.25 4.57
55 56 0.469494 ACTCCACTCACATGTGTGCA 59.531 50.000 24.63 5.64 45.25 4.57
56 57 1.072806 ACTCCACTCACATGTGTGCAT 59.927 47.619 24.63 5.52 45.25 3.96
65 66 2.204748 ATGTGTGCATGAATGGGCC 58.795 52.632 0.00 0.00 33.37 5.80
66 67 1.332144 ATGTGTGCATGAATGGGCCC 61.332 55.000 17.59 17.59 33.37 5.80
67 68 1.983481 GTGTGCATGAATGGGCCCA 60.983 57.895 30.92 30.92 0.00 5.36
68 69 1.229114 TGTGCATGAATGGGCCCAA 60.229 52.632 32.58 14.13 0.00 4.12
69 70 0.835115 TGTGCATGAATGGGCCCAAA 60.835 50.000 32.58 18.60 0.00 3.28
70 71 0.108041 GTGCATGAATGGGCCCAAAG 60.108 55.000 32.58 17.66 0.00 2.77
71 72 0.252148 TGCATGAATGGGCCCAAAGA 60.252 50.000 32.58 15.99 0.00 2.52
72 73 0.903942 GCATGAATGGGCCCAAAGAA 59.096 50.000 32.58 15.71 0.00 2.52
73 74 1.487558 GCATGAATGGGCCCAAAGAAT 59.512 47.619 32.58 17.41 0.00 2.40
74 75 2.092807 GCATGAATGGGCCCAAAGAATT 60.093 45.455 32.58 19.15 0.00 2.17
75 76 3.622953 GCATGAATGGGCCCAAAGAATTT 60.623 43.478 32.58 18.28 40.26 1.82
76 77 3.979101 TGAATGGGCCCAAAGAATTTC 57.021 42.857 32.58 25.99 35.03 2.17
77 78 3.246301 TGAATGGGCCCAAAGAATTTCA 58.754 40.909 32.58 28.33 35.03 2.69
78 79 3.261390 TGAATGGGCCCAAAGAATTTCAG 59.739 43.478 32.58 0.00 35.03 3.02
79 80 2.692709 TGGGCCCAAAGAATTTCAGA 57.307 45.000 26.33 0.00 35.03 3.27
80 81 2.969628 TGGGCCCAAAGAATTTCAGAA 58.030 42.857 26.33 0.00 35.03 3.02
81 82 3.519667 TGGGCCCAAAGAATTTCAGAAT 58.480 40.909 26.33 0.00 35.03 2.40
82 83 3.909364 TGGGCCCAAAGAATTTCAGAATT 59.091 39.130 26.33 0.00 35.03 2.17
83 84 4.350520 TGGGCCCAAAGAATTTCAGAATTT 59.649 37.500 26.33 0.00 35.03 1.82
84 85 5.163109 TGGGCCCAAAGAATTTCAGAATTTT 60.163 36.000 26.33 0.00 35.03 1.82
85 86 6.043706 TGGGCCCAAAGAATTTCAGAATTTTA 59.956 34.615 26.33 0.00 35.03 1.52
86 87 6.595326 GGGCCCAAAGAATTTCAGAATTTTAG 59.405 38.462 19.95 0.00 35.03 1.85
87 88 7.161404 GGCCCAAAGAATTTCAGAATTTTAGT 58.839 34.615 0.00 0.00 35.03 2.24
88 89 7.661437 GGCCCAAAGAATTTCAGAATTTTAGTT 59.339 33.333 0.00 0.00 35.03 2.24
89 90 8.498358 GCCCAAAGAATTTCAGAATTTTAGTTG 58.502 33.333 0.00 0.00 35.03 3.16
90 91 8.992073 CCCAAAGAATTTCAGAATTTTAGTTGG 58.008 33.333 14.22 14.22 35.03 3.77
91 92 8.992073 CCAAAGAATTTCAGAATTTTAGTTGGG 58.008 33.333 13.79 4.99 35.03 4.12
92 93 8.498358 CAAAGAATTTCAGAATTTTAGTTGGGC 58.502 33.333 0.00 0.00 35.03 5.36
93 94 7.544804 AGAATTTCAGAATTTTAGTTGGGCT 57.455 32.000 0.00 0.00 35.65 5.19
94 95 7.966812 AGAATTTCAGAATTTTAGTTGGGCTT 58.033 30.769 0.00 0.00 35.65 4.35
95 96 8.432013 AGAATTTCAGAATTTTAGTTGGGCTTT 58.568 29.630 0.00 0.00 35.65 3.51
96 97 7.967890 ATTTCAGAATTTTAGTTGGGCTTTG 57.032 32.000 0.00 0.00 0.00 2.77
97 98 5.467035 TCAGAATTTTAGTTGGGCTTTGG 57.533 39.130 0.00 0.00 0.00 3.28
98 99 4.283212 TCAGAATTTTAGTTGGGCTTTGGG 59.717 41.667 0.00 0.00 0.00 4.12
99 100 4.040339 CAGAATTTTAGTTGGGCTTTGGGT 59.960 41.667 0.00 0.00 0.00 4.51
100 101 4.283467 AGAATTTTAGTTGGGCTTTGGGTC 59.717 41.667 0.00 0.00 0.00 4.46
101 102 2.757894 TTTAGTTGGGCTTTGGGTCA 57.242 45.000 0.00 0.00 0.00 4.02
102 103 2.757894 TTAGTTGGGCTTTGGGTCAA 57.242 45.000 0.00 0.00 0.00 3.18
103 104 2.757894 TAGTTGGGCTTTGGGTCAAA 57.242 45.000 0.00 0.00 0.00 2.69
111 112 2.586648 CTTTGGGTCAAAGGCCTACT 57.413 50.000 5.16 0.00 44.75 2.57
112 113 3.713826 CTTTGGGTCAAAGGCCTACTA 57.286 47.619 5.16 0.00 44.75 1.82
113 114 3.610911 CTTTGGGTCAAAGGCCTACTAG 58.389 50.000 5.16 0.00 44.75 2.57
114 115 0.909623 TGGGTCAAAGGCCTACTAGC 59.090 55.000 5.16 3.46 0.00 3.42
115 116 0.909623 GGGTCAAAGGCCTACTAGCA 59.090 55.000 5.16 0.00 0.00 3.49
116 117 1.280998 GGGTCAAAGGCCTACTAGCAA 59.719 52.381 5.16 0.00 0.00 3.91
117 118 2.290705 GGGTCAAAGGCCTACTAGCAAA 60.291 50.000 5.16 0.00 0.00 3.68
118 119 3.418047 GGTCAAAGGCCTACTAGCAAAA 58.582 45.455 5.16 0.00 0.00 2.44
119 120 4.017126 GGTCAAAGGCCTACTAGCAAAAT 58.983 43.478 5.16 0.00 0.00 1.82
120 121 4.462834 GGTCAAAGGCCTACTAGCAAAATT 59.537 41.667 5.16 0.00 0.00 1.82
121 122 5.393135 GGTCAAAGGCCTACTAGCAAAATTC 60.393 44.000 5.16 0.00 0.00 2.17
122 123 5.416013 GTCAAAGGCCTACTAGCAAAATTCT 59.584 40.000 5.16 0.00 0.00 2.40
123 124 6.598064 GTCAAAGGCCTACTAGCAAAATTCTA 59.402 38.462 5.16 0.00 0.00 2.10
124 125 7.120726 GTCAAAGGCCTACTAGCAAAATTCTAA 59.879 37.037 5.16 0.00 0.00 2.10
125 126 7.120726 TCAAAGGCCTACTAGCAAAATTCTAAC 59.879 37.037 5.16 0.00 0.00 2.34
126 127 6.062258 AGGCCTACTAGCAAAATTCTAACA 57.938 37.500 1.29 0.00 0.00 2.41
127 128 6.481643 AGGCCTACTAGCAAAATTCTAACAA 58.518 36.000 1.29 0.00 0.00 2.83
128 129 7.119387 AGGCCTACTAGCAAAATTCTAACAAT 58.881 34.615 1.29 0.00 0.00 2.71
129 130 8.272173 AGGCCTACTAGCAAAATTCTAACAATA 58.728 33.333 1.29 0.00 0.00 1.90
130 131 8.899771 GGCCTACTAGCAAAATTCTAACAATAA 58.100 33.333 0.00 0.00 0.00 1.40
139 140 8.807581 GCAAAATTCTAACAATAATACCTGTGC 58.192 33.333 0.00 0.00 0.00 4.57
140 141 9.853555 CAAAATTCTAACAATAATACCTGTGCA 57.146 29.630 0.00 0.00 0.00 4.57
144 145 8.574251 TTCTAACAATAATACCTGTGCAATGT 57.426 30.769 0.00 0.00 0.00 2.71
145 146 9.674068 TTCTAACAATAATACCTGTGCAATGTA 57.326 29.630 0.00 0.00 0.00 2.29
146 147 9.845740 TCTAACAATAATACCTGTGCAATGTAT 57.154 29.630 0.00 0.00 0.00 2.29
149 150 8.752005 ACAATAATACCTGTGCAATGTATTCT 57.248 30.769 15.88 7.69 36.73 2.40
150 151 8.623903 ACAATAATACCTGTGCAATGTATTCTG 58.376 33.333 15.88 15.77 36.73 3.02
151 152 8.623903 CAATAATACCTGTGCAATGTATTCTGT 58.376 33.333 15.88 5.88 36.73 3.41
152 153 8.752005 ATAATACCTGTGCAATGTATTCTGTT 57.248 30.769 15.88 1.78 36.73 3.16
170 171 8.831715 ATTCTGTTTGTTTGGATTGGTATTTC 57.168 30.769 0.00 0.00 0.00 2.17
199 200 6.404712 GTGCAACAAGTTCTATGGTACTAC 57.595 41.667 0.00 0.00 36.32 2.73
443 612 8.463930 ACTTCTATTTCATGGTTCACTTCAAA 57.536 30.769 0.00 0.00 0.00 2.69
467 636 1.980765 TCAAGACAGACATTGGGAGCT 59.019 47.619 0.00 0.00 0.00 4.09
475 644 0.779997 ACATTGGGAGCTGGTTTCCT 59.220 50.000 0.00 0.00 35.01 3.36
479 648 0.772124 TGGGAGCTGGTTTCCTCCTT 60.772 55.000 0.00 0.00 45.54 3.36
482 651 1.065782 GGAGCTGGTTTCCTCCTTCTC 60.066 57.143 0.00 0.00 43.42 2.87
504 673 1.616159 CCGGTCAACCCTTTGATTGT 58.384 50.000 0.00 0.00 43.72 2.71
507 676 2.350388 CGGTCAACCCTTTGATTGTTCG 60.350 50.000 0.00 0.00 43.72 3.95
508 677 2.621526 GGTCAACCCTTTGATTGTTCGT 59.378 45.455 0.00 0.00 43.72 3.85
509 678 3.550030 GGTCAACCCTTTGATTGTTCGTG 60.550 47.826 0.00 0.00 43.72 4.35
510 679 3.066203 GTCAACCCTTTGATTGTTCGTGT 59.934 43.478 0.00 0.00 43.72 4.49
511 680 4.273969 GTCAACCCTTTGATTGTTCGTGTA 59.726 41.667 0.00 0.00 43.72 2.90
512 681 4.513692 TCAACCCTTTGATTGTTCGTGTAG 59.486 41.667 0.00 0.00 36.79 2.74
513 682 4.081322 ACCCTTTGATTGTTCGTGTAGT 57.919 40.909 0.00 0.00 0.00 2.73
514 683 4.457466 ACCCTTTGATTGTTCGTGTAGTT 58.543 39.130 0.00 0.00 0.00 2.24
515 684 4.885325 ACCCTTTGATTGTTCGTGTAGTTT 59.115 37.500 0.00 0.00 0.00 2.66
516 685 5.358725 ACCCTTTGATTGTTCGTGTAGTTTT 59.641 36.000 0.00 0.00 0.00 2.43
517 686 6.543100 ACCCTTTGATTGTTCGTGTAGTTTTA 59.457 34.615 0.00 0.00 0.00 1.52
518 687 7.075741 CCCTTTGATTGTTCGTGTAGTTTTAG 58.924 38.462 0.00 0.00 0.00 1.85
520 689 7.255001 CCTTTGATTGTTCGTGTAGTTTTAGGT 60.255 37.037 0.00 0.00 0.00 3.08
522 691 5.403166 TGATTGTTCGTGTAGTTTTAGGTCG 59.597 40.000 0.00 0.00 0.00 4.79
523 692 4.305989 TGTTCGTGTAGTTTTAGGTCGT 57.694 40.909 0.00 0.00 0.00 4.34
524 693 4.290155 TGTTCGTGTAGTTTTAGGTCGTC 58.710 43.478 0.00 0.00 0.00 4.20
525 694 4.202000 TGTTCGTGTAGTTTTAGGTCGTCA 60.202 41.667 0.00 0.00 0.00 4.35
526 695 4.566545 TCGTGTAGTTTTAGGTCGTCAA 57.433 40.909 0.00 0.00 0.00 3.18
527 696 5.125100 TCGTGTAGTTTTAGGTCGTCAAT 57.875 39.130 0.00 0.00 0.00 2.57
529 698 5.984926 TCGTGTAGTTTTAGGTCGTCAATTT 59.015 36.000 0.00 0.00 0.00 1.82
530 699 6.068931 CGTGTAGTTTTAGGTCGTCAATTTG 58.931 40.000 0.00 0.00 0.00 2.32
531 700 6.074195 CGTGTAGTTTTAGGTCGTCAATTTGA 60.074 38.462 0.00 0.00 0.00 2.69
532 701 7.288672 GTGTAGTTTTAGGTCGTCAATTTGAG 58.711 38.462 0.00 0.00 0.00 3.02
534 703 7.711772 TGTAGTTTTAGGTCGTCAATTTGAGAA 59.288 33.333 0.00 0.00 0.00 2.87
535 704 7.562454 AGTTTTAGGTCGTCAATTTGAGAAA 57.438 32.000 0.00 0.00 0.00 2.52
536 705 8.166422 AGTTTTAGGTCGTCAATTTGAGAAAT 57.834 30.769 0.00 0.00 0.00 2.17
537 706 8.630037 AGTTTTAGGTCGTCAATTTGAGAAATT 58.370 29.630 0.00 0.00 41.57 1.82
662 831 8.838452 AGTTAAAATGTCGATCTAGAACTACG 57.162 34.615 0.00 1.19 0.00 3.51
663 832 8.457261 AGTTAAAATGTCGATCTAGAACTACGT 58.543 33.333 0.00 0.00 0.00 3.57
664 833 8.521860 GTTAAAATGTCGATCTAGAACTACGTG 58.478 37.037 0.00 0.00 0.00 4.49
665 834 6.432607 AAATGTCGATCTAGAACTACGTGA 57.567 37.500 0.00 0.00 0.00 4.35
666 835 6.432607 AATGTCGATCTAGAACTACGTGAA 57.567 37.500 0.00 0.00 0.00 3.18
667 836 6.621316 ATGTCGATCTAGAACTACGTGAAT 57.379 37.500 0.00 0.00 0.00 2.57
668 837 7.725818 ATGTCGATCTAGAACTACGTGAATA 57.274 36.000 0.00 0.00 0.00 1.75
669 838 7.543947 TGTCGATCTAGAACTACGTGAATAA 57.456 36.000 0.00 0.00 0.00 1.40
670 839 7.404985 TGTCGATCTAGAACTACGTGAATAAC 58.595 38.462 0.00 0.00 0.00 1.89
671 840 7.279536 TGTCGATCTAGAACTACGTGAATAACT 59.720 37.037 0.00 0.00 0.00 2.24
672 841 8.121708 GTCGATCTAGAACTACGTGAATAACTT 58.878 37.037 0.00 0.00 0.00 2.66
673 842 9.317936 TCGATCTAGAACTACGTGAATAACTTA 57.682 33.333 0.00 0.00 0.00 2.24
689 858 9.098355 TGAATAACTTATTCATTGAGACGAAGG 57.902 33.333 16.98 0.00 46.92 3.46
690 859 9.099454 GAATAACTTATTCATTGAGACGAAGGT 57.901 33.333 14.32 0.00 43.12 3.50
695 864 8.915036 ACTTATTCATTGAGACGAAGGTAGTAT 58.085 33.333 0.00 0.00 0.00 2.12
700 869 7.713750 TCATTGAGACGAAGGTAGTATTAAGG 58.286 38.462 0.00 0.00 0.00 2.69
706 875 8.480133 AGACGAAGGTAGTATTAAGGATGATT 57.520 34.615 0.00 0.00 0.00 2.57
749 918 1.850377 CTATCTCACAGGCTCGCTTG 58.150 55.000 0.00 0.00 0.00 4.01
771 940 8.874816 GCTTGTAGGAGTAGTTTCTTATTCTTG 58.125 37.037 0.00 0.00 0.00 3.02
788 957 2.163613 TCTTGCGCTGTCTTCTCGAATA 59.836 45.455 9.73 0.00 0.00 1.75
1083 1255 0.326048 ACCTGGTGGAGATCCTGGAG 60.326 60.000 13.32 0.00 43.71 3.86
1464 1636 3.490759 TACGACGACGGCGAGGTC 61.491 66.667 32.70 18.60 44.46 3.85
1575 1747 2.360475 GGCAGCAAGGTGAGGGTC 60.360 66.667 3.05 0.00 0.00 4.46
1590 1762 1.812922 GGTCAGCTGATGAGTGGCG 60.813 63.158 21.47 0.00 39.07 5.69
1654 1827 6.164176 CCCTTGTGTTACGAGAGATTTTAGT 58.836 40.000 0.00 0.00 31.05 2.24
1730 1906 4.801891 GCTGAATGCAAATTCTGTGAGAA 58.198 39.130 0.00 0.00 42.31 2.87
1743 1919 8.524870 AATTCTGTGAGAAAAACAATGTATGC 57.475 30.769 0.00 0.00 37.82 3.14
1767 1943 5.798434 CAGTTCGAATACATACTCACGTTGA 59.202 40.000 0.00 0.00 0.00 3.18
1775 1951 5.283060 ACATACTCACGTTGAAGCAAATC 57.717 39.130 0.00 0.00 0.00 2.17
1790 1966 1.614903 CAAATCATGTGGTGTGGCAGT 59.385 47.619 0.00 0.00 0.00 4.40
1795 1971 2.011947 CATGTGGTGTGGCAGTATGAG 58.988 52.381 0.00 0.00 39.69 2.90
1803 1980 4.811557 GGTGTGGCAGTATGAGATTTACTC 59.188 45.833 0.00 0.00 45.11 2.59
1807 1984 4.038042 TGGCAGTATGAGATTTACTCCTCG 59.962 45.833 0.00 0.00 44.34 4.63
1810 1990 6.144175 GCAGTATGAGATTTACTCCTCGTAC 58.856 44.000 11.66 11.66 45.42 3.67
1832 2015 8.495949 CGTACACTCATTTTTGTGTAGAGAAAT 58.504 33.333 6.26 0.00 46.21 2.17
1874 2062 4.455533 CCGATATGCTGCTGCCTAAAAATA 59.544 41.667 13.47 3.52 38.71 1.40
1876 2064 6.025896 CGATATGCTGCTGCCTAAAAATATG 58.974 40.000 13.47 1.36 38.71 1.78
1902 2091 7.742556 TGTGAATCAACATAACATCAGAACA 57.257 32.000 0.00 0.00 0.00 3.18
1903 2092 7.809665 TGTGAATCAACATAACATCAGAACAG 58.190 34.615 0.00 0.00 0.00 3.16
1904 2093 7.661027 TGTGAATCAACATAACATCAGAACAGA 59.339 33.333 0.00 0.00 0.00 3.41
1905 2094 8.671921 GTGAATCAACATAACATCAGAACAGAT 58.328 33.333 0.00 0.00 0.00 2.90
1906 2095 9.234827 TGAATCAACATAACATCAGAACAGATT 57.765 29.630 0.00 0.00 0.00 2.40
1910 2099 9.942850 TCAACATAACATCAGAACAGATTAGAA 57.057 29.630 0.00 0.00 0.00 2.10
1933 2122 0.321671 TCTTGTCTCTCCCCGCAAAG 59.678 55.000 0.00 0.00 0.00 2.77
1936 2125 0.762418 TGTCTCTCCCCGCAAAGAAA 59.238 50.000 0.00 0.00 0.00 2.52
1937 2126 1.142060 TGTCTCTCCCCGCAAAGAAAA 59.858 47.619 0.00 0.00 0.00 2.29
1938 2127 2.227194 GTCTCTCCCCGCAAAGAAAAA 58.773 47.619 0.00 0.00 0.00 1.94
1984 2173 2.831333 ACAGAAATCAGATAGCGGCTG 58.169 47.619 13.86 0.00 34.71 4.85
1998 2187 0.583438 CGGCTGATTTGATAGCACCG 59.417 55.000 0.00 0.00 41.63 4.94
2010 2199 3.490890 GCACCGAGCCAAGATGTC 58.509 61.111 0.00 0.00 37.23 3.06
2018 2207 3.419915 CGAGCCAAGATGTCAAATTTCG 58.580 45.455 0.00 0.00 0.00 3.46
2028 2217 3.210227 TGTCAAATTTCGAACCAGAGCA 58.790 40.909 0.00 0.00 0.00 4.26
2040 2229 1.136891 ACCAGAGCAAACAAACCAAGC 59.863 47.619 0.00 0.00 0.00 4.01
2076 2265 6.565234 AGTATCAAGACGGTAACATCTCTTG 58.435 40.000 4.23 4.23 40.62 3.02
2077 2266 4.866508 TCAAGACGGTAACATCTCTTGT 57.133 40.909 8.81 0.00 40.30 3.16
2078 2267 4.806330 TCAAGACGGTAACATCTCTTGTC 58.194 43.478 8.81 0.00 40.30 3.18
2079 2268 4.523173 TCAAGACGGTAACATCTCTTGTCT 59.477 41.667 8.81 0.00 40.30 3.41
2080 2269 4.705337 AGACGGTAACATCTCTTGTCTC 57.295 45.455 0.00 0.00 37.68 3.36
2081 2270 4.337145 AGACGGTAACATCTCTTGTCTCT 58.663 43.478 0.00 0.00 37.68 3.10
2082 2271 4.767928 AGACGGTAACATCTCTTGTCTCTT 59.232 41.667 0.00 0.00 37.68 2.85
2086 2275 7.705214 ACGGTAACATCTCTTGTCTCTTATAC 58.295 38.462 0.00 0.00 37.68 1.47
2090 2279 9.509855 GTAACATCTCTTGTCTCTTATACACAG 57.490 37.037 0.00 0.00 37.68 3.66
2110 2299 3.252215 CAGTCAAACATGGGCTTTACGAA 59.748 43.478 0.00 0.00 0.00 3.85
2116 2305 3.596214 ACATGGGCTTTACGAACTAGTG 58.404 45.455 0.00 0.00 0.00 2.74
2117 2306 2.088950 TGGGCTTTACGAACTAGTGC 57.911 50.000 0.00 0.00 0.00 4.40
2118 2307 1.338389 TGGGCTTTACGAACTAGTGCC 60.338 52.381 9.14 9.14 38.28 5.01
2119 2308 1.066358 GGGCTTTACGAACTAGTGCCT 60.066 52.381 15.42 0.00 38.93 4.75
2120 2309 2.269172 GGCTTTACGAACTAGTGCCTC 58.731 52.381 10.14 0.00 36.32 4.70
2121 2310 2.269172 GCTTTACGAACTAGTGCCTCC 58.731 52.381 0.00 0.00 0.00 4.30
2122 2311 2.527100 CTTTACGAACTAGTGCCTCCG 58.473 52.381 0.00 0.00 0.00 4.63
2123 2312 1.538047 TTACGAACTAGTGCCTCCGT 58.462 50.000 0.00 4.61 0.00 4.69
2124 2313 1.538047 TACGAACTAGTGCCTCCGTT 58.462 50.000 0.00 0.00 0.00 4.44
2125 2314 0.243095 ACGAACTAGTGCCTCCGTTC 59.757 55.000 0.00 0.00 34.07 3.95
2126 2315 0.526662 CGAACTAGTGCCTCCGTTCT 59.473 55.000 0.00 0.00 34.98 3.01
2127 2316 1.732732 CGAACTAGTGCCTCCGTTCTG 60.733 57.143 0.00 0.00 34.98 3.02
2128 2317 1.544691 GAACTAGTGCCTCCGTTCTGA 59.455 52.381 0.00 0.00 34.47 3.27
2129 2318 1.853963 ACTAGTGCCTCCGTTCTGAT 58.146 50.000 0.00 0.00 0.00 2.90
2130 2319 2.180276 ACTAGTGCCTCCGTTCTGATT 58.820 47.619 0.00 0.00 0.00 2.57
2131 2320 2.567615 ACTAGTGCCTCCGTTCTGATTT 59.432 45.455 0.00 0.00 0.00 2.17
2132 2321 3.767673 ACTAGTGCCTCCGTTCTGATTTA 59.232 43.478 0.00 0.00 0.00 1.40
2133 2322 3.914426 AGTGCCTCCGTTCTGATTTAT 57.086 42.857 0.00 0.00 0.00 1.40
2134 2323 4.222124 AGTGCCTCCGTTCTGATTTATT 57.778 40.909 0.00 0.00 0.00 1.40
2135 2324 4.192317 AGTGCCTCCGTTCTGATTTATTC 58.808 43.478 0.00 0.00 0.00 1.75
2136 2325 3.001330 GTGCCTCCGTTCTGATTTATTCG 59.999 47.826 0.00 0.00 0.00 3.34
2137 2326 3.195661 GCCTCCGTTCTGATTTATTCGT 58.804 45.455 0.00 0.00 0.00 3.85
2138 2327 3.245519 GCCTCCGTTCTGATTTATTCGTC 59.754 47.826 0.00 0.00 0.00 4.20
2139 2328 3.486108 CCTCCGTTCTGATTTATTCGTCG 59.514 47.826 0.00 0.00 0.00 5.12
2140 2329 4.100707 TCCGTTCTGATTTATTCGTCGT 57.899 40.909 0.00 0.00 0.00 4.34
2141 2330 3.855379 TCCGTTCTGATTTATTCGTCGTG 59.145 43.478 0.00 0.00 0.00 4.35
2142 2331 3.611113 CCGTTCTGATTTATTCGTCGTGT 59.389 43.478 0.00 0.00 0.00 4.49
2143 2332 4.259292 CCGTTCTGATTTATTCGTCGTGTC 60.259 45.833 0.00 0.00 0.00 3.67
2144 2333 4.543844 CGTTCTGATTTATTCGTCGTGTCG 60.544 45.833 0.00 0.00 0.00 4.35
2145 2334 4.087510 TCTGATTTATTCGTCGTGTCGT 57.912 40.909 0.00 0.00 0.00 4.34
2146 2335 3.849708 TCTGATTTATTCGTCGTGTCGTG 59.150 43.478 0.00 0.00 0.00 4.35
2147 2336 2.918600 TGATTTATTCGTCGTGTCGTGG 59.081 45.455 0.00 0.00 0.00 4.94
2148 2337 2.420628 TTTATTCGTCGTGTCGTGGT 57.579 45.000 0.00 0.00 0.00 4.16
2149 2338 2.420628 TTATTCGTCGTGTCGTGGTT 57.579 45.000 0.00 0.00 0.00 3.67
2150 2339 2.420628 TATTCGTCGTGTCGTGGTTT 57.579 45.000 0.00 0.00 0.00 3.27
2151 2340 1.574134 ATTCGTCGTGTCGTGGTTTT 58.426 45.000 0.00 0.00 0.00 2.43
2152 2341 2.200792 TTCGTCGTGTCGTGGTTTTA 57.799 45.000 0.00 0.00 0.00 1.52
2153 2342 1.757574 TCGTCGTGTCGTGGTTTTAG 58.242 50.000 0.00 0.00 0.00 1.85
2154 2343 1.065401 TCGTCGTGTCGTGGTTTTAGT 59.935 47.619 0.00 0.00 0.00 2.24
2155 2344 1.854126 CGTCGTGTCGTGGTTTTAGTT 59.146 47.619 0.00 0.00 0.00 2.24
2156 2345 2.097733 CGTCGTGTCGTGGTTTTAGTTC 60.098 50.000 0.00 0.00 0.00 3.01
2157 2346 2.859538 GTCGTGTCGTGGTTTTAGTTCA 59.140 45.455 0.00 0.00 0.00 3.18
2158 2347 3.306703 GTCGTGTCGTGGTTTTAGTTCAA 59.693 43.478 0.00 0.00 0.00 2.69
2159 2348 3.931468 TCGTGTCGTGGTTTTAGTTCAAA 59.069 39.130 0.00 0.00 0.00 2.69
2160 2349 4.571580 TCGTGTCGTGGTTTTAGTTCAAAT 59.428 37.500 0.00 0.00 0.00 2.32
2161 2350 5.064962 TCGTGTCGTGGTTTTAGTTCAAATT 59.935 36.000 0.00 0.00 0.00 1.82
2162 2351 5.740099 CGTGTCGTGGTTTTAGTTCAAATTT 59.260 36.000 0.00 0.00 0.00 1.82
2163 2352 6.290851 CGTGTCGTGGTTTTAGTTCAAATTTG 60.291 38.462 12.15 12.15 0.00 2.32
2164 2353 6.748198 GTGTCGTGGTTTTAGTTCAAATTTGA 59.252 34.615 16.91 16.91 34.92 2.69
2165 2354 7.273815 GTGTCGTGGTTTTAGTTCAAATTTGAA 59.726 33.333 26.01 26.01 44.31 2.69
2179 2368 7.383050 TCAAATTTGAATTAAAACCACGACG 57.617 32.000 18.45 0.00 33.55 5.12
2180 2369 7.194278 TCAAATTTGAATTAAAACCACGACGA 58.806 30.769 18.45 0.00 33.55 4.20
2181 2370 7.377397 TCAAATTTGAATTAAAACCACGACGAG 59.623 33.333 18.45 0.00 33.55 4.18
2182 2371 5.738118 TTTGAATTAAAACCACGACGAGT 57.262 34.783 0.00 0.00 0.00 4.18
2183 2372 6.841443 TTTGAATTAAAACCACGACGAGTA 57.159 33.333 0.00 0.00 0.00 2.59
2184 2373 6.841443 TTGAATTAAAACCACGACGAGTAA 57.159 33.333 0.00 0.00 0.00 2.24
2185 2374 6.841443 TGAATTAAAACCACGACGAGTAAA 57.159 33.333 0.00 0.00 0.00 2.01
2186 2375 7.424227 TGAATTAAAACCACGACGAGTAAAT 57.576 32.000 0.00 0.00 0.00 1.40
2187 2376 7.512297 TGAATTAAAACCACGACGAGTAAATC 58.488 34.615 0.00 0.00 0.00 2.17
2188 2377 7.171167 TGAATTAAAACCACGACGAGTAAATCA 59.829 33.333 0.00 0.00 0.00 2.57
2189 2378 4.985044 AAAACCACGACGAGTAAATCAG 57.015 40.909 0.00 0.00 0.00 2.90
2190 2379 3.928727 AACCACGACGAGTAAATCAGA 57.071 42.857 0.00 0.00 0.00 3.27
2191 2380 3.928727 ACCACGACGAGTAAATCAGAA 57.071 42.857 0.00 0.00 0.00 3.02
2192 2381 4.451629 ACCACGACGAGTAAATCAGAAT 57.548 40.909 0.00 0.00 0.00 2.40
2193 2382 4.174009 ACCACGACGAGTAAATCAGAATG 58.826 43.478 0.00 0.00 37.54 2.67
2194 2383 3.551890 CCACGACGAGTAAATCAGAATGG 59.448 47.826 0.00 0.00 36.16 3.16
2195 2384 4.421058 CACGACGAGTAAATCAGAATGGA 58.579 43.478 0.00 0.00 36.16 3.41
2196 2385 4.500837 CACGACGAGTAAATCAGAATGGAG 59.499 45.833 0.00 0.00 36.16 3.86
2197 2386 4.398358 ACGACGAGTAAATCAGAATGGAGA 59.602 41.667 0.00 0.00 36.16 3.71
2198 2387 4.973051 CGACGAGTAAATCAGAATGGAGAG 59.027 45.833 0.00 0.00 36.16 3.20
2199 2388 5.220873 CGACGAGTAAATCAGAATGGAGAGA 60.221 44.000 0.00 0.00 36.16 3.10
2200 2389 6.142818 ACGAGTAAATCAGAATGGAGAGAG 57.857 41.667 0.00 0.00 36.16 3.20
2201 2390 5.654650 ACGAGTAAATCAGAATGGAGAGAGT 59.345 40.000 0.00 0.00 36.16 3.24
2202 2391 6.829298 ACGAGTAAATCAGAATGGAGAGAGTA 59.171 38.462 0.00 0.00 36.16 2.59
2203 2392 7.136119 CGAGTAAATCAGAATGGAGAGAGTAC 58.864 42.308 0.00 0.00 36.16 2.73
2204 2393 7.012894 CGAGTAAATCAGAATGGAGAGAGTACT 59.987 40.741 0.00 0.00 36.16 2.73
2205 2394 9.344772 GAGTAAATCAGAATGGAGAGAGTACTA 57.655 37.037 0.00 0.00 36.16 1.82
2206 2395 9.127277 AGTAAATCAGAATGGAGAGAGTACTAC 57.873 37.037 0.00 0.00 36.16 2.73
2207 2396 9.127277 GTAAATCAGAATGGAGAGAGTACTACT 57.873 37.037 0.00 0.00 36.16 2.57
2210 2399 9.875708 AATCAGAATGGAGAGAGTACTACTAAT 57.124 33.333 0.00 0.00 36.16 1.73
2277 2466 7.417116 GCAGGATCATCAAACCAACATAAAGAT 60.417 37.037 0.00 0.00 0.00 2.40
2282 2471 9.811995 ATCATCAAACCAACATAAAGATTGATG 57.188 29.630 15.72 15.72 46.98 3.07
2284 2473 6.397272 TCAAACCAACATAAAGATTGATGCC 58.603 36.000 0.00 0.00 0.00 4.40
2286 2475 5.841957 ACCAACATAAAGATTGATGCCTC 57.158 39.130 0.00 0.00 0.00 4.70
2287 2476 4.336433 ACCAACATAAAGATTGATGCCTCG 59.664 41.667 0.00 0.00 0.00 4.63
2288 2477 4.336433 CCAACATAAAGATTGATGCCTCGT 59.664 41.667 0.00 0.00 0.00 4.18
2289 2478 5.163622 CCAACATAAAGATTGATGCCTCGTT 60.164 40.000 0.00 0.00 0.00 3.85
2374 2592 2.089980 CAGACTCCTTGGCCAATTGAG 58.910 52.381 29.82 29.82 0.00 3.02
2409 2627 1.831736 ACTGCTACCATAGGACACCAC 59.168 52.381 0.00 0.00 0.00 4.16
2410 2628 2.111384 CTGCTACCATAGGACACCACT 58.889 52.381 0.00 0.00 0.00 4.00
2411 2629 1.831106 TGCTACCATAGGACACCACTG 59.169 52.381 0.00 0.00 0.00 3.66
2412 2630 1.473434 GCTACCATAGGACACCACTGC 60.473 57.143 0.00 0.00 0.00 4.40
2413 2631 1.831106 CTACCATAGGACACCACTGCA 59.169 52.381 0.00 0.00 0.00 4.41
2414 2632 0.615331 ACCATAGGACACCACTGCAG 59.385 55.000 13.48 13.48 0.00 4.41
2420 2638 1.589716 GGACACCACTGCAGGAATGC 61.590 60.000 19.93 8.53 0.00 3.56
2434 2652 0.815615 GAATGCCCCCGTCTCATCAC 60.816 60.000 0.00 0.00 0.00 3.06
2506 2724 6.349445 CCCGTAGATAGAGCGAGATTAACATT 60.349 42.308 0.00 0.00 0.00 2.71
2507 2725 6.743627 CCGTAGATAGAGCGAGATTAACATTC 59.256 42.308 0.00 0.00 0.00 2.67
2508 2726 6.743627 CGTAGATAGAGCGAGATTAACATTCC 59.256 42.308 0.00 0.00 0.00 3.01
2509 2727 6.031751 AGATAGAGCGAGATTAACATTCCC 57.968 41.667 0.00 0.00 0.00 3.97
2510 2728 5.540337 AGATAGAGCGAGATTAACATTCCCA 59.460 40.000 0.00 0.00 0.00 4.37
2511 2729 4.696479 AGAGCGAGATTAACATTCCCAT 57.304 40.909 0.00 0.00 0.00 4.00
2512 2730 4.384056 AGAGCGAGATTAACATTCCCATG 58.616 43.478 0.00 0.00 36.34 3.66
2513 2731 4.130118 GAGCGAGATTAACATTCCCATGT 58.870 43.478 0.00 0.00 46.34 3.21
2514 2732 3.879295 AGCGAGATTAACATTCCCATGTG 59.121 43.478 0.00 0.00 43.34 3.21
2515 2733 3.548818 GCGAGATTAACATTCCCATGTGC 60.549 47.826 0.00 0.00 43.34 4.57
2516 2734 3.003689 CGAGATTAACATTCCCATGTGCC 59.996 47.826 0.00 0.00 43.34 5.01
2517 2735 3.299503 AGATTAACATTCCCATGTGCCC 58.700 45.455 0.00 0.00 43.34 5.36
2518 2736 2.917713 TTAACATTCCCATGTGCCCT 57.082 45.000 0.00 0.00 43.34 5.19
2519 2737 2.917713 TAACATTCCCATGTGCCCTT 57.082 45.000 0.00 0.00 43.34 3.95
2520 2738 2.028561 AACATTCCCATGTGCCCTTT 57.971 45.000 0.00 0.00 43.34 3.11
2521 2739 1.269012 ACATTCCCATGTGCCCTTTG 58.731 50.000 0.00 0.00 42.46 2.77
2522 2740 1.203162 ACATTCCCATGTGCCCTTTGA 60.203 47.619 0.00 0.00 42.46 2.69
2523 2741 1.901159 CATTCCCATGTGCCCTTTGAA 59.099 47.619 0.00 0.00 0.00 2.69
2524 2742 2.323999 TTCCCATGTGCCCTTTGAAT 57.676 45.000 0.00 0.00 0.00 2.57
2525 2743 1.851304 TCCCATGTGCCCTTTGAATC 58.149 50.000 0.00 0.00 0.00 2.52
2526 2744 1.358787 TCCCATGTGCCCTTTGAATCT 59.641 47.619 0.00 0.00 0.00 2.40
2527 2745 1.479323 CCCATGTGCCCTTTGAATCTG 59.521 52.381 0.00 0.00 0.00 2.90
2528 2746 1.134907 CCATGTGCCCTTTGAATCTGC 60.135 52.381 0.00 0.00 0.00 4.26
2529 2747 1.822990 CATGTGCCCTTTGAATCTGCT 59.177 47.619 0.00 0.00 0.00 4.24
2530 2748 1.538047 TGTGCCCTTTGAATCTGCTC 58.462 50.000 0.00 0.00 0.00 4.26
2531 2749 1.202915 TGTGCCCTTTGAATCTGCTCA 60.203 47.619 0.00 0.00 0.00 4.26
2532 2750 1.200948 GTGCCCTTTGAATCTGCTCAC 59.799 52.381 0.00 0.00 0.00 3.51
2533 2751 0.813821 GCCCTTTGAATCTGCTCACC 59.186 55.000 0.00 0.00 0.00 4.02
2534 2752 1.887956 GCCCTTTGAATCTGCTCACCA 60.888 52.381 0.00 0.00 0.00 4.17
2535 2753 2.731572 CCCTTTGAATCTGCTCACCAT 58.268 47.619 0.00 0.00 0.00 3.55
2536 2754 2.426024 CCCTTTGAATCTGCTCACCATG 59.574 50.000 0.00 0.00 0.00 3.66
2537 2755 3.087031 CCTTTGAATCTGCTCACCATGT 58.913 45.455 0.00 0.00 0.00 3.21
2538 2756 3.119602 CCTTTGAATCTGCTCACCATGTG 60.120 47.826 0.00 0.00 34.45 3.21
2539 2757 1.456296 TGAATCTGCTCACCATGTGC 58.544 50.000 0.00 0.00 37.38 4.57
2540 2758 0.737219 GAATCTGCTCACCATGTGCC 59.263 55.000 0.83 0.00 36.15 5.01
2541 2759 0.038599 AATCTGCTCACCATGTGCCA 59.961 50.000 0.83 0.00 36.15 4.92
2542 2760 0.257905 ATCTGCTCACCATGTGCCAT 59.742 50.000 0.83 0.00 36.15 4.40
2543 2761 0.038599 TCTGCTCACCATGTGCCATT 59.961 50.000 0.83 0.00 36.15 3.16
2544 2762 0.892755 CTGCTCACCATGTGCCATTT 59.107 50.000 0.83 0.00 36.15 2.32
2545 2763 0.604073 TGCTCACCATGTGCCATTTG 59.396 50.000 0.83 0.00 36.15 2.32
2546 2764 0.738412 GCTCACCATGTGCCATTTGC 60.738 55.000 0.00 0.00 41.77 3.68
2547 2765 0.108520 CTCACCATGTGCCATTTGCC 60.109 55.000 0.00 0.00 40.16 4.52
2548 2766 0.830866 TCACCATGTGCCATTTGCCA 60.831 50.000 0.00 0.00 40.16 4.92
2549 2767 0.035036 CACCATGTGCCATTTGCCAA 59.965 50.000 0.00 0.00 40.16 4.52
2550 2768 0.035176 ACCATGTGCCATTTGCCAAC 59.965 50.000 0.00 0.00 40.16 3.77
2551 2769 0.035036 CCATGTGCCATTTGCCAACA 59.965 50.000 0.00 0.00 40.16 3.33
2552 2770 1.339247 CCATGTGCCATTTGCCAACAT 60.339 47.619 0.00 0.00 37.14 2.71
2553 2771 2.428491 CATGTGCCATTTGCCAACATT 58.572 42.857 0.00 0.00 35.15 2.71
2554 2772 2.166821 TGTGCCATTTGCCAACATTC 57.833 45.000 0.00 0.00 40.16 2.67
2555 2773 1.270732 TGTGCCATTTGCCAACATTCC 60.271 47.619 0.00 0.00 40.16 3.01
2556 2774 0.324285 TGCCATTTGCCAACATTCCC 59.676 50.000 0.00 0.00 40.16 3.97
2557 2775 0.324285 GCCATTTGCCAACATTCCCA 59.676 50.000 0.00 0.00 0.00 4.37
2558 2776 1.065272 GCCATTTGCCAACATTCCCAT 60.065 47.619 0.00 0.00 0.00 4.00
2559 2777 2.908916 CCATTTGCCAACATTCCCATC 58.091 47.619 0.00 0.00 0.00 3.51
2560 2778 2.236644 CCATTTGCCAACATTCCCATCA 59.763 45.455 0.00 0.00 0.00 3.07
2561 2779 3.307550 CCATTTGCCAACATTCCCATCAA 60.308 43.478 0.00 0.00 0.00 2.57
2562 2780 4.325119 CATTTGCCAACATTCCCATCAAA 58.675 39.130 0.00 0.00 0.00 2.69
2563 2781 4.637387 TTTGCCAACATTCCCATCAAAT 57.363 36.364 0.00 0.00 0.00 2.32
2564 2782 5.752036 TTTGCCAACATTCCCATCAAATA 57.248 34.783 0.00 0.00 0.00 1.40
2565 2783 5.954153 TTGCCAACATTCCCATCAAATAT 57.046 34.783 0.00 0.00 0.00 1.28
2566 2784 7.429374 TTTGCCAACATTCCCATCAAATATA 57.571 32.000 0.00 0.00 0.00 0.86
2567 2785 6.403866 TGCCAACATTCCCATCAAATATAC 57.596 37.500 0.00 0.00 0.00 1.47
2568 2786 5.304101 TGCCAACATTCCCATCAAATATACC 59.696 40.000 0.00 0.00 0.00 2.73
2569 2787 5.304101 GCCAACATTCCCATCAAATATACCA 59.696 40.000 0.00 0.00 0.00 3.25
2570 2788 6.183360 GCCAACATTCCCATCAAATATACCAA 60.183 38.462 0.00 0.00 0.00 3.67
2571 2789 7.209475 CCAACATTCCCATCAAATATACCAAC 58.791 38.462 0.00 0.00 0.00 3.77
2572 2790 7.147759 CCAACATTCCCATCAAATATACCAACA 60.148 37.037 0.00 0.00 0.00 3.33
2573 2791 8.423349 CAACATTCCCATCAAATATACCAACAT 58.577 33.333 0.00 0.00 0.00 2.71
2574 2792 7.954835 ACATTCCCATCAAATATACCAACATG 58.045 34.615 0.00 0.00 0.00 3.21
2575 2793 7.564660 ACATTCCCATCAAATATACCAACATGT 59.435 33.333 0.00 0.00 0.00 3.21
2576 2794 7.581213 TTCCCATCAAATATACCAACATGTC 57.419 36.000 0.00 0.00 0.00 3.06
2577 2795 6.667661 TCCCATCAAATATACCAACATGTCA 58.332 36.000 0.00 0.00 0.00 3.58
2578 2796 6.545666 TCCCATCAAATATACCAACATGTCAC 59.454 38.462 0.00 0.00 0.00 3.67
2579 2797 6.429624 CCATCAAATATACCAACATGTCACG 58.570 40.000 0.00 0.00 0.00 4.35
2580 2798 5.478233 TCAAATATACCAACATGTCACGC 57.522 39.130 0.00 0.00 0.00 5.34
2581 2799 5.182487 TCAAATATACCAACATGTCACGCT 58.818 37.500 0.00 0.00 0.00 5.07
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.433306 TTAGTCCCCACATGGAAGTTG 57.567 47.619 0.00 0.00 35.80 3.16
1 2 3.397955 AGTTTAGTCCCCACATGGAAGTT 59.602 43.478 0.00 0.00 35.80 2.66
2 3 2.986728 AGTTTAGTCCCCACATGGAAGT 59.013 45.455 0.00 0.00 35.80 3.01
3 4 3.721087 AGTTTAGTCCCCACATGGAAG 57.279 47.619 0.00 0.00 35.80 3.46
4 5 4.463050 AAAGTTTAGTCCCCACATGGAA 57.537 40.909 0.00 0.00 35.80 3.53
5 6 4.600111 ACTAAAGTTTAGTCCCCACATGGA 59.400 41.667 20.34 0.00 37.39 3.41
6 7 4.918588 ACTAAAGTTTAGTCCCCACATGG 58.081 43.478 20.34 0.00 0.00 3.66
7 8 5.805728 AGACTAAAGTTTAGTCCCCACATG 58.194 41.667 35.91 9.91 43.61 3.21
8 9 5.546499 TGAGACTAAAGTTTAGTCCCCACAT 59.454 40.000 35.91 24.05 43.61 3.21
9 10 4.903049 TGAGACTAAAGTTTAGTCCCCACA 59.097 41.667 35.91 28.84 43.61 4.17
10 11 5.011840 AGTGAGACTAAAGTTTAGTCCCCAC 59.988 44.000 36.41 36.41 43.61 4.61
11 12 5.152934 AGTGAGACTAAAGTTTAGTCCCCA 58.847 41.667 35.91 31.33 43.61 4.96
12 13 5.245526 TGAGTGAGACTAAAGTTTAGTCCCC 59.754 44.000 35.91 29.84 43.61 4.81
13 14 6.015265 AGTGAGTGAGACTAAAGTTTAGTCCC 60.015 42.308 35.91 29.95 43.61 4.46
14 15 6.983984 AGTGAGTGAGACTAAAGTTTAGTCC 58.016 40.000 35.91 29.29 43.61 3.85
15 16 7.085746 GGAGTGAGTGAGACTAAAGTTTAGTC 58.914 42.308 34.14 34.14 43.08 2.59
16 17 6.550108 TGGAGTGAGTGAGACTAAAGTTTAGT 59.450 38.462 24.91 24.91 0.00 2.24
17 18 6.864165 GTGGAGTGAGTGAGACTAAAGTTTAG 59.136 42.308 19.07 19.07 0.00 1.85
18 19 6.550108 AGTGGAGTGAGTGAGACTAAAGTTTA 59.450 38.462 0.00 0.00 0.00 2.01
19 20 5.364157 AGTGGAGTGAGTGAGACTAAAGTTT 59.636 40.000 0.00 0.00 0.00 2.66
20 21 4.896482 AGTGGAGTGAGTGAGACTAAAGTT 59.104 41.667 0.00 0.00 0.00 2.66
21 22 4.475345 AGTGGAGTGAGTGAGACTAAAGT 58.525 43.478 0.00 0.00 0.00 2.66
22 23 4.520874 TGAGTGGAGTGAGTGAGACTAAAG 59.479 45.833 0.00 0.00 0.00 1.85
23 24 4.278669 GTGAGTGGAGTGAGTGAGACTAAA 59.721 45.833 0.00 0.00 0.00 1.85
24 25 3.821600 GTGAGTGGAGTGAGTGAGACTAA 59.178 47.826 0.00 0.00 0.00 2.24
25 26 3.181443 TGTGAGTGGAGTGAGTGAGACTA 60.181 47.826 0.00 0.00 0.00 2.59
26 27 2.235016 GTGAGTGGAGTGAGTGAGACT 58.765 52.381 0.00 0.00 0.00 3.24
27 28 1.957177 TGTGAGTGGAGTGAGTGAGAC 59.043 52.381 0.00 0.00 0.00 3.36
28 29 2.364972 TGTGAGTGGAGTGAGTGAGA 57.635 50.000 0.00 0.00 0.00 3.27
29 30 2.298446 ACATGTGAGTGGAGTGAGTGAG 59.702 50.000 0.00 0.00 0.00 3.51
30 31 2.036346 CACATGTGAGTGGAGTGAGTGA 59.964 50.000 21.64 0.00 35.88 3.41
31 32 2.224137 ACACATGTGAGTGGAGTGAGTG 60.224 50.000 31.94 0.49 43.72 3.51
32 33 2.042464 ACACATGTGAGTGGAGTGAGT 58.958 47.619 31.94 1.87 43.72 3.41
33 34 2.827800 ACACATGTGAGTGGAGTGAG 57.172 50.000 31.94 1.10 43.72 3.51
47 48 1.332144 GGGCCCATTCATGCACACAT 61.332 55.000 19.95 0.00 36.79 3.21
48 49 1.983481 GGGCCCATTCATGCACACA 60.983 57.895 19.95 0.00 0.00 3.72
49 50 1.543065 TTGGGCCCATTCATGCACAC 61.543 55.000 29.23 0.00 41.39 3.82
50 51 0.835115 TTTGGGCCCATTCATGCACA 60.835 50.000 29.23 3.48 39.59 4.57
51 52 0.108041 CTTTGGGCCCATTCATGCAC 60.108 55.000 29.23 0.00 0.00 4.57
52 53 0.252148 TCTTTGGGCCCATTCATGCA 60.252 50.000 29.23 5.39 0.00 3.96
53 54 0.903942 TTCTTTGGGCCCATTCATGC 59.096 50.000 29.23 0.00 0.00 4.06
54 55 3.918294 AATTCTTTGGGCCCATTCATG 57.082 42.857 29.23 13.56 0.00 3.07
55 56 3.845398 TGAAATTCTTTGGGCCCATTCAT 59.155 39.130 29.23 12.93 0.00 2.57
56 57 3.246301 TGAAATTCTTTGGGCCCATTCA 58.754 40.909 29.23 27.01 0.00 2.57
57 58 3.515104 TCTGAAATTCTTTGGGCCCATTC 59.485 43.478 29.23 24.64 0.00 2.67
58 59 3.519667 TCTGAAATTCTTTGGGCCCATT 58.480 40.909 29.23 16.58 0.00 3.16
59 60 3.188880 TCTGAAATTCTTTGGGCCCAT 57.811 42.857 29.23 8.85 0.00 4.00
60 61 2.692709 TCTGAAATTCTTTGGGCCCA 57.307 45.000 24.45 24.45 0.00 5.36
61 62 4.558226 AATTCTGAAATTCTTTGGGCCC 57.442 40.909 17.59 17.59 28.70 5.80
62 63 7.161404 ACTAAAATTCTGAAATTCTTTGGGCC 58.839 34.615 0.00 0.00 33.93 5.80
63 64 8.498358 CAACTAAAATTCTGAAATTCTTTGGGC 58.502 33.333 0.00 0.00 33.93 5.36
64 65 8.992073 CCAACTAAAATTCTGAAATTCTTTGGG 58.008 33.333 12.92 2.71 33.93 4.12
65 66 8.992073 CCCAACTAAAATTCTGAAATTCTTTGG 58.008 33.333 13.40 13.40 33.93 3.28
66 67 8.498358 GCCCAACTAAAATTCTGAAATTCTTTG 58.502 33.333 0.00 0.00 33.93 2.77
67 68 8.432013 AGCCCAACTAAAATTCTGAAATTCTTT 58.568 29.630 0.00 0.00 33.93 2.52
68 69 7.966812 AGCCCAACTAAAATTCTGAAATTCTT 58.033 30.769 0.00 0.00 33.93 2.52
69 70 7.544804 AGCCCAACTAAAATTCTGAAATTCT 57.455 32.000 0.00 0.00 33.93 2.40
70 71 8.498358 CAAAGCCCAACTAAAATTCTGAAATTC 58.502 33.333 0.00 0.00 33.93 2.17
71 72 7.445096 CCAAAGCCCAACTAAAATTCTGAAATT 59.555 33.333 0.00 0.00 36.64 1.82
72 73 6.936335 CCAAAGCCCAACTAAAATTCTGAAAT 59.064 34.615 0.00 0.00 0.00 2.17
73 74 6.287525 CCAAAGCCCAACTAAAATTCTGAAA 58.712 36.000 0.00 0.00 0.00 2.69
74 75 5.221621 CCCAAAGCCCAACTAAAATTCTGAA 60.222 40.000 0.00 0.00 0.00 3.02
75 76 4.283212 CCCAAAGCCCAACTAAAATTCTGA 59.717 41.667 0.00 0.00 0.00 3.27
76 77 4.040339 ACCCAAAGCCCAACTAAAATTCTG 59.960 41.667 0.00 0.00 0.00 3.02
77 78 4.231273 ACCCAAAGCCCAACTAAAATTCT 58.769 39.130 0.00 0.00 0.00 2.40
78 79 4.039852 TGACCCAAAGCCCAACTAAAATTC 59.960 41.667 0.00 0.00 0.00 2.17
79 80 3.970640 TGACCCAAAGCCCAACTAAAATT 59.029 39.130 0.00 0.00 0.00 1.82
80 81 3.582164 TGACCCAAAGCCCAACTAAAAT 58.418 40.909 0.00 0.00 0.00 1.82
81 82 3.033659 TGACCCAAAGCCCAACTAAAA 57.966 42.857 0.00 0.00 0.00 1.52
82 83 2.757894 TGACCCAAAGCCCAACTAAA 57.242 45.000 0.00 0.00 0.00 1.85
83 84 2.757894 TTGACCCAAAGCCCAACTAA 57.242 45.000 0.00 0.00 0.00 2.24
84 85 2.593026 CTTTGACCCAAAGCCCAACTA 58.407 47.619 6.51 0.00 43.07 2.24
85 86 1.413118 CTTTGACCCAAAGCCCAACT 58.587 50.000 6.51 0.00 43.07 3.16
86 87 0.392706 CCTTTGACCCAAAGCCCAAC 59.607 55.000 12.53 0.00 46.44 3.77
87 88 1.406860 GCCTTTGACCCAAAGCCCAA 61.407 55.000 12.53 0.00 46.44 4.12
88 89 1.836604 GCCTTTGACCCAAAGCCCA 60.837 57.895 12.53 0.00 46.44 5.36
89 90 2.583441 GGCCTTTGACCCAAAGCCC 61.583 63.158 12.53 8.45 46.44 5.19
90 91 0.251608 TAGGCCTTTGACCCAAAGCC 60.252 55.000 12.58 15.28 46.44 4.35
91 92 0.888619 GTAGGCCTTTGACCCAAAGC 59.111 55.000 12.58 8.78 46.44 3.51
93 94 2.290705 GCTAGTAGGCCTTTGACCCAAA 60.291 50.000 12.58 0.00 0.00 3.28
94 95 1.280998 GCTAGTAGGCCTTTGACCCAA 59.719 52.381 12.58 0.00 0.00 4.12
95 96 0.909623 GCTAGTAGGCCTTTGACCCA 59.090 55.000 12.58 0.00 0.00 4.51
96 97 0.909623 TGCTAGTAGGCCTTTGACCC 59.090 55.000 12.58 0.00 0.00 4.46
97 98 2.781681 TTGCTAGTAGGCCTTTGACC 57.218 50.000 12.58 0.00 0.00 4.02
98 99 5.416013 AGAATTTTGCTAGTAGGCCTTTGAC 59.584 40.000 12.58 2.38 0.00 3.18
99 100 5.570320 AGAATTTTGCTAGTAGGCCTTTGA 58.430 37.500 12.58 0.00 0.00 2.69
100 101 5.904362 AGAATTTTGCTAGTAGGCCTTTG 57.096 39.130 12.58 0.00 0.00 2.77
101 102 6.946009 TGTTAGAATTTTGCTAGTAGGCCTTT 59.054 34.615 12.58 1.84 0.00 3.11
102 103 6.481643 TGTTAGAATTTTGCTAGTAGGCCTT 58.518 36.000 12.58 0.00 0.00 4.35
103 104 6.062258 TGTTAGAATTTTGCTAGTAGGCCT 57.938 37.500 11.78 11.78 0.00 5.19
104 105 6.753107 TTGTTAGAATTTTGCTAGTAGGCC 57.247 37.500 0.00 0.00 0.00 5.19
113 114 8.807581 GCACAGGTATTATTGTTAGAATTTTGC 58.192 33.333 0.00 0.00 0.00 3.68
114 115 9.853555 TGCACAGGTATTATTGTTAGAATTTTG 57.146 29.630 0.00 0.00 0.00 2.44
118 119 9.189156 ACATTGCACAGGTATTATTGTTAGAAT 57.811 29.630 0.00 0.00 0.00 2.40
119 120 8.574251 ACATTGCACAGGTATTATTGTTAGAA 57.426 30.769 0.00 0.00 0.00 2.10
120 121 9.845740 ATACATTGCACAGGTATTATTGTTAGA 57.154 29.630 0.00 0.00 0.00 2.10
123 124 9.189156 AGAATACATTGCACAGGTATTATTGTT 57.811 29.630 13.72 0.00 37.72 2.83
124 125 8.623903 CAGAATACATTGCACAGGTATTATTGT 58.376 33.333 13.72 0.00 37.72 2.71
125 126 8.623903 ACAGAATACATTGCACAGGTATTATTG 58.376 33.333 13.72 15.42 37.72 1.90
126 127 8.752005 ACAGAATACATTGCACAGGTATTATT 57.248 30.769 13.72 6.15 37.72 1.40
127 128 8.752005 AACAGAATACATTGCACAGGTATTAT 57.248 30.769 13.72 9.85 37.72 1.28
128 129 8.458052 CAAACAGAATACATTGCACAGGTATTA 58.542 33.333 13.72 0.00 37.72 0.98
129 130 7.039784 ACAAACAGAATACATTGCACAGGTATT 60.040 33.333 13.65 13.65 39.65 1.89
130 131 6.434028 ACAAACAGAATACATTGCACAGGTAT 59.566 34.615 0.00 0.00 0.00 2.73
131 132 5.767665 ACAAACAGAATACATTGCACAGGTA 59.232 36.000 0.00 0.00 0.00 3.08
132 133 4.584325 ACAAACAGAATACATTGCACAGGT 59.416 37.500 0.00 0.00 0.00 4.00
133 134 5.125100 ACAAACAGAATACATTGCACAGG 57.875 39.130 0.00 0.00 0.00 4.00
134 135 6.074195 CCAAACAAACAGAATACATTGCACAG 60.074 38.462 0.00 0.00 0.00 3.66
135 136 5.752472 CCAAACAAACAGAATACATTGCACA 59.248 36.000 0.00 0.00 0.00 4.57
136 137 5.982516 TCCAAACAAACAGAATACATTGCAC 59.017 36.000 0.00 0.00 0.00 4.57
137 138 6.154203 TCCAAACAAACAGAATACATTGCA 57.846 33.333 0.00 0.00 0.00 4.08
138 139 7.360269 CCAATCCAAACAAACAGAATACATTGC 60.360 37.037 0.00 0.00 0.00 3.56
139 140 7.656948 ACCAATCCAAACAAACAGAATACATTG 59.343 33.333 0.00 0.00 0.00 2.82
140 141 7.734942 ACCAATCCAAACAAACAGAATACATT 58.265 30.769 0.00 0.00 0.00 2.71
141 142 7.301868 ACCAATCCAAACAAACAGAATACAT 57.698 32.000 0.00 0.00 0.00 2.29
142 143 6.723298 ACCAATCCAAACAAACAGAATACA 57.277 33.333 0.00 0.00 0.00 2.29
143 144 9.705290 AAATACCAATCCAAACAAACAGAATAC 57.295 29.630 0.00 0.00 0.00 1.89
144 145 9.921637 GAAATACCAATCCAAACAAACAGAATA 57.078 29.630 0.00 0.00 0.00 1.75
145 146 8.650490 AGAAATACCAATCCAAACAAACAGAAT 58.350 29.630 0.00 0.00 0.00 2.40
146 147 8.017418 AGAAATACCAATCCAAACAAACAGAA 57.983 30.769 0.00 0.00 0.00 3.02
147 148 7.595819 AGAAATACCAATCCAAACAAACAGA 57.404 32.000 0.00 0.00 0.00 3.41
170 171 7.792374 ACCATAGAACTTGTTGCACATATAG 57.208 36.000 0.00 0.00 0.00 1.31
174 175 5.560724 AGTACCATAGAACTTGTTGCACAT 58.439 37.500 0.00 0.00 0.00 3.21
187 188 5.163343 GGCACAAATGAGGTAGTACCATAGA 60.163 44.000 21.49 2.34 41.95 1.98
342 344 8.729805 TTTGTGCTTAATTTTGACCAAAGATT 57.270 26.923 0.00 0.00 0.00 2.40
380 382 5.644644 ACTACGTCCGTCCTTGTTTATTAG 58.355 41.667 0.00 0.00 0.00 1.73
382 384 4.525912 ACTACGTCCGTCCTTGTTTATT 57.474 40.909 0.00 0.00 0.00 1.40
434 603 4.876107 GTCTGTCTTGAAGGTTTGAAGTGA 59.124 41.667 0.00 0.00 0.00 3.41
443 612 2.711009 TCCCAATGTCTGTCTTGAAGGT 59.289 45.455 0.00 0.00 0.00 3.50
467 636 0.693049 GGCAGAGAAGGAGGAAACCA 59.307 55.000 0.00 0.00 0.00 3.67
475 644 1.671742 GTTGACCGGCAGAGAAGGA 59.328 57.895 0.00 0.00 0.00 3.36
479 648 1.415672 AAAGGGTTGACCGGCAGAGA 61.416 55.000 0.00 0.00 46.96 3.10
482 651 0.609131 ATCAAAGGGTTGACCGGCAG 60.609 55.000 0.00 0.00 46.40 4.85
504 673 4.566545 TGACGACCTAAAACTACACGAA 57.433 40.909 0.00 0.00 0.00 3.85
507 676 7.170320 TCTCAAATTGACGACCTAAAACTACAC 59.830 37.037 0.00 0.00 0.00 2.90
508 677 7.211573 TCTCAAATTGACGACCTAAAACTACA 58.788 34.615 0.00 0.00 0.00 2.74
509 678 7.647907 TCTCAAATTGACGACCTAAAACTAC 57.352 36.000 0.00 0.00 0.00 2.73
510 679 8.665643 TTTCTCAAATTGACGACCTAAAACTA 57.334 30.769 0.00 0.00 0.00 2.24
511 680 7.562454 TTTCTCAAATTGACGACCTAAAACT 57.438 32.000 0.00 0.00 0.00 2.66
512 681 8.797266 AATTTCTCAAATTGACGACCTAAAAC 57.203 30.769 0.00 0.00 39.50 2.43
636 805 9.926751 CGTAGTTCTAGATCGACATTTTAACTA 57.073 33.333 12.67 0.00 0.00 2.24
637 806 8.457261 ACGTAGTTCTAGATCGACATTTTAACT 58.543 33.333 12.67 0.00 37.78 2.24
638 807 8.521860 CACGTAGTTCTAGATCGACATTTTAAC 58.478 37.037 12.67 0.00 41.61 2.01
639 808 8.453320 TCACGTAGTTCTAGATCGACATTTTAA 58.547 33.333 12.67 0.00 41.61 1.52
640 809 7.977904 TCACGTAGTTCTAGATCGACATTTTA 58.022 34.615 12.67 0.00 41.61 1.52
641 810 6.849502 TCACGTAGTTCTAGATCGACATTTT 58.150 36.000 12.67 0.00 41.61 1.82
642 811 6.432607 TCACGTAGTTCTAGATCGACATTT 57.567 37.500 12.67 0.00 41.61 2.32
643 812 6.432607 TTCACGTAGTTCTAGATCGACATT 57.567 37.500 12.67 0.00 41.61 2.71
644 813 6.621316 ATTCACGTAGTTCTAGATCGACAT 57.379 37.500 12.67 0.00 41.61 3.06
645 814 7.279536 AGTTATTCACGTAGTTCTAGATCGACA 59.720 37.037 12.67 0.00 41.61 4.35
646 815 7.629130 AGTTATTCACGTAGTTCTAGATCGAC 58.371 38.462 11.86 8.46 41.61 4.20
647 816 7.783090 AGTTATTCACGTAGTTCTAGATCGA 57.217 36.000 11.86 0.00 41.61 3.59
664 833 9.099454 ACCTTCGTCTCAATGAATAAGTTATTC 57.901 33.333 23.28 23.28 43.73 1.75
666 835 9.751542 CTACCTTCGTCTCAATGAATAAGTTAT 57.248 33.333 0.00 0.00 30.14 1.89
667 836 8.746530 ACTACCTTCGTCTCAATGAATAAGTTA 58.253 33.333 0.00 0.00 30.14 2.24
668 837 7.612677 ACTACCTTCGTCTCAATGAATAAGTT 58.387 34.615 0.00 0.00 30.14 2.66
669 838 7.171630 ACTACCTTCGTCTCAATGAATAAGT 57.828 36.000 0.00 0.00 30.14 2.24
670 839 9.751542 AATACTACCTTCGTCTCAATGAATAAG 57.248 33.333 0.00 0.00 30.14 1.73
673 842 9.751542 CTTAATACTACCTTCGTCTCAATGAAT 57.248 33.333 0.00 0.00 30.14 2.57
674 843 8.195436 CCTTAATACTACCTTCGTCTCAATGAA 58.805 37.037 0.00 0.00 0.00 2.57
675 844 7.558807 TCCTTAATACTACCTTCGTCTCAATGA 59.441 37.037 0.00 0.00 0.00 2.57
676 845 7.713750 TCCTTAATACTACCTTCGTCTCAATG 58.286 38.462 0.00 0.00 0.00 2.82
677 846 7.893124 TCCTTAATACTACCTTCGTCTCAAT 57.107 36.000 0.00 0.00 0.00 2.57
678 847 7.558807 TCATCCTTAATACTACCTTCGTCTCAA 59.441 37.037 0.00 0.00 0.00 3.02
679 848 7.058525 TCATCCTTAATACTACCTTCGTCTCA 58.941 38.462 0.00 0.00 0.00 3.27
680 849 7.507733 TCATCCTTAATACTACCTTCGTCTC 57.492 40.000 0.00 0.00 0.00 3.36
681 850 8.361139 CAATCATCCTTAATACTACCTTCGTCT 58.639 37.037 0.00 0.00 0.00 4.18
682 851 7.116519 GCAATCATCCTTAATACTACCTTCGTC 59.883 40.741 0.00 0.00 0.00 4.20
683 852 6.929606 GCAATCATCCTTAATACTACCTTCGT 59.070 38.462 0.00 0.00 0.00 3.85
684 853 6.929049 TGCAATCATCCTTAATACTACCTTCG 59.071 38.462 0.00 0.00 0.00 3.79
685 854 8.677148 TTGCAATCATCCTTAATACTACCTTC 57.323 34.615 0.00 0.00 0.00 3.46
686 855 8.275040 ACTTGCAATCATCCTTAATACTACCTT 58.725 33.333 0.00 0.00 0.00 3.50
687 856 7.806180 ACTTGCAATCATCCTTAATACTACCT 58.194 34.615 0.00 0.00 0.00 3.08
688 857 9.555727 TTACTTGCAATCATCCTTAATACTACC 57.444 33.333 0.00 0.00 0.00 3.18
695 864 8.806429 TCTTGATTACTTGCAATCATCCTTAA 57.194 30.769 0.00 0.00 42.83 1.85
698 867 5.826737 CCTCTTGATTACTTGCAATCATCCT 59.173 40.000 0.00 0.00 42.83 3.24
700 869 6.932356 TCCTCTTGATTACTTGCAATCATC 57.068 37.500 0.00 2.69 42.83 2.92
706 875 5.278463 GCAAAGTTCCTCTTGATTACTTGCA 60.278 40.000 0.00 0.00 36.40 4.08
749 918 6.019720 GCGCAAGAATAAGAAACTACTCCTAC 60.020 42.308 0.30 0.00 43.02 3.18
771 940 5.830900 AAATATATTCGAGAAGACAGCGC 57.169 39.130 0.00 0.00 0.00 5.92
803 975 1.129437 GATTTCAGTCTCAAGCGGCAC 59.871 52.381 1.45 0.00 0.00 5.01
1155 1327 2.642254 CGTGGTGCCCTCGAAGGTA 61.642 63.158 1.20 0.00 42.19 3.08
1464 1636 1.153745 CTCGCGGTTCTCCTTCCAG 60.154 63.158 6.13 0.00 0.00 3.86
1575 1747 3.200593 GCCGCCACTCATCAGCTG 61.201 66.667 7.63 7.63 0.00 4.24
1654 1827 3.386726 TCGAACTTCACCTTTCTCTTCCA 59.613 43.478 0.00 0.00 0.00 3.53
1721 1897 6.262944 ACTGCATACATTGTTTTTCTCACAGA 59.737 34.615 0.00 0.00 0.00 3.41
1726 1902 6.370593 TCGAACTGCATACATTGTTTTTCTC 58.629 36.000 0.00 0.00 0.00 2.87
1730 1906 7.589395 TGTATTCGAACTGCATACATTGTTTT 58.411 30.769 0.00 0.00 30.12 2.43
1767 1943 1.001181 GCCACACCACATGATTTGCTT 59.999 47.619 0.00 0.00 0.00 3.91
1775 1951 2.011947 CTCATACTGCCACACCACATG 58.988 52.381 0.00 0.00 0.00 3.21
1790 1966 7.052248 TGAGTGTACGAGGAGTAAATCTCATA 58.948 38.462 0.00 0.00 44.40 2.15
1795 1971 7.829378 AAAATGAGTGTACGAGGAGTAAATC 57.171 36.000 0.00 0.00 37.02 2.17
1803 1980 5.924254 TCTACACAAAAATGAGTGTACGAGG 59.076 40.000 0.00 0.00 46.32 4.63
1810 1990 9.173939 GTGAATTTCTCTACACAAAAATGAGTG 57.826 33.333 0.00 0.00 41.40 3.51
1832 2015 2.161855 GGTTCTGATGCATGGTGTGAA 58.838 47.619 2.46 0.00 0.00 3.18
1901 2090 8.093927 GGGGAGAGACAAGATAATTCTAATCTG 58.906 40.741 0.00 0.00 33.95 2.90
1902 2091 7.039363 CGGGGAGAGACAAGATAATTCTAATCT 60.039 40.741 0.00 0.00 35.17 2.40
1903 2092 7.093992 CGGGGAGAGACAAGATAATTCTAATC 58.906 42.308 0.00 0.00 0.00 1.75
1904 2093 6.519213 GCGGGGAGAGACAAGATAATTCTAAT 60.519 42.308 0.00 0.00 0.00 1.73
1905 2094 5.221461 GCGGGGAGAGACAAGATAATTCTAA 60.221 44.000 0.00 0.00 0.00 2.10
1906 2095 4.281182 GCGGGGAGAGACAAGATAATTCTA 59.719 45.833 0.00 0.00 0.00 2.10
1907 2096 3.070302 GCGGGGAGAGACAAGATAATTCT 59.930 47.826 0.00 0.00 0.00 2.40
1908 2097 3.181465 TGCGGGGAGAGACAAGATAATTC 60.181 47.826 0.00 0.00 0.00 2.17
1909 2098 2.771943 TGCGGGGAGAGACAAGATAATT 59.228 45.455 0.00 0.00 0.00 1.40
1910 2099 2.398588 TGCGGGGAGAGACAAGATAAT 58.601 47.619 0.00 0.00 0.00 1.28
1911 2100 1.860641 TGCGGGGAGAGACAAGATAA 58.139 50.000 0.00 0.00 0.00 1.75
1912 2101 1.860641 TTGCGGGGAGAGACAAGATA 58.139 50.000 0.00 0.00 0.00 1.98
1913 2102 0.984230 TTTGCGGGGAGAGACAAGAT 59.016 50.000 0.00 0.00 0.00 2.40
1914 2103 0.321671 CTTTGCGGGGAGAGACAAGA 59.678 55.000 0.00 0.00 0.00 3.02
1915 2104 0.321671 TCTTTGCGGGGAGAGACAAG 59.678 55.000 0.00 0.00 0.00 3.16
1916 2105 0.762418 TTCTTTGCGGGGAGAGACAA 59.238 50.000 0.00 0.00 0.00 3.18
1936 2125 5.705441 TCAGCCGAGACAACATAATTCTTTT 59.295 36.000 0.00 0.00 0.00 2.27
1937 2126 5.245531 TCAGCCGAGACAACATAATTCTTT 58.754 37.500 0.00 0.00 0.00 2.52
1938 2127 4.832248 TCAGCCGAGACAACATAATTCTT 58.168 39.130 0.00 0.00 0.00 2.52
1939 2128 4.471904 TCAGCCGAGACAACATAATTCT 57.528 40.909 0.00 0.00 0.00 2.40
1976 2165 2.483876 GTGCTATCAAATCAGCCGCTA 58.516 47.619 0.00 0.00 36.95 4.26
1984 2173 1.953559 TGGCTCGGTGCTATCAAATC 58.046 50.000 1.77 0.00 42.39 2.17
1998 2187 4.685169 TCGAAATTTGACATCTTGGCTC 57.315 40.909 0.00 0.00 0.00 4.70
2010 2199 4.358851 TGTTTGCTCTGGTTCGAAATTTG 58.641 39.130 0.00 0.00 0.00 2.32
2018 2207 3.447742 CTTGGTTTGTTTGCTCTGGTTC 58.552 45.455 0.00 0.00 0.00 3.62
2028 2217 4.339814 TCAGGTAATTCGCTTGGTTTGTTT 59.660 37.500 0.00 0.00 0.00 2.83
2040 2229 5.459107 CCGTCTTGATACTTCAGGTAATTCG 59.541 44.000 0.00 0.00 33.74 3.34
2076 2265 6.313905 CCCATGTTTGACTGTGTATAAGAGAC 59.686 42.308 0.00 0.00 0.00 3.36
2077 2266 6.406370 CCCATGTTTGACTGTGTATAAGAGA 58.594 40.000 0.00 0.00 0.00 3.10
2078 2267 5.065218 GCCCATGTTTGACTGTGTATAAGAG 59.935 44.000 0.00 0.00 0.00 2.85
2079 2268 4.941263 GCCCATGTTTGACTGTGTATAAGA 59.059 41.667 0.00 0.00 0.00 2.10
2080 2269 4.943705 AGCCCATGTTTGACTGTGTATAAG 59.056 41.667 0.00 0.00 0.00 1.73
2081 2270 4.917385 AGCCCATGTTTGACTGTGTATAA 58.083 39.130 0.00 0.00 0.00 0.98
2082 2271 4.568072 AGCCCATGTTTGACTGTGTATA 57.432 40.909 0.00 0.00 0.00 1.47
2086 2275 3.609175 CGTAAAGCCCATGTTTGACTGTG 60.609 47.826 0.00 0.00 0.00 3.66
2090 2279 3.252458 AGTTCGTAAAGCCCATGTTTGAC 59.748 43.478 0.00 0.00 0.00 3.18
2110 2299 1.853963 ATCAGAACGGAGGCACTAGT 58.146 50.000 0.00 0.00 41.55 2.57
2116 2305 3.195661 ACGAATAAATCAGAACGGAGGC 58.804 45.455 0.00 0.00 0.00 4.70
2117 2306 3.486108 CGACGAATAAATCAGAACGGAGG 59.514 47.826 0.00 0.00 0.00 4.30
2118 2307 4.027621 CACGACGAATAAATCAGAACGGAG 60.028 45.833 0.00 0.00 0.00 4.63
2119 2308 3.855379 CACGACGAATAAATCAGAACGGA 59.145 43.478 0.00 0.00 0.00 4.69
2120 2309 3.611113 ACACGACGAATAAATCAGAACGG 59.389 43.478 0.00 0.00 0.00 4.44
2121 2310 4.543844 CGACACGACGAATAAATCAGAACG 60.544 45.833 0.00 0.00 35.09 3.95
2122 2311 4.322804 ACGACACGACGAATAAATCAGAAC 59.677 41.667 0.00 0.00 37.03 3.01
2123 2312 4.322539 CACGACACGACGAATAAATCAGAA 59.677 41.667 0.00 0.00 37.03 3.02
2124 2313 3.849708 CACGACACGACGAATAAATCAGA 59.150 43.478 0.00 0.00 37.03 3.27
2125 2314 3.001070 CCACGACACGACGAATAAATCAG 60.001 47.826 0.00 0.00 37.03 2.90
2126 2315 2.918600 CCACGACACGACGAATAAATCA 59.081 45.455 0.00 0.00 37.03 2.57
2127 2316 2.919229 ACCACGACACGACGAATAAATC 59.081 45.455 0.00 0.00 37.03 2.17
2128 2317 2.950433 ACCACGACACGACGAATAAAT 58.050 42.857 0.00 0.00 37.03 1.40
2129 2318 2.420628 ACCACGACACGACGAATAAA 57.579 45.000 0.00 0.00 37.03 1.40
2130 2319 2.420628 AACCACGACACGACGAATAA 57.579 45.000 0.00 0.00 37.03 1.40
2131 2320 2.420628 AAACCACGACACGACGAATA 57.579 45.000 0.00 0.00 37.03 1.75
2132 2321 1.574134 AAAACCACGACACGACGAAT 58.426 45.000 0.00 0.00 37.03 3.34
2133 2322 2.118683 CTAAAACCACGACACGACGAA 58.881 47.619 0.00 0.00 37.03 3.85
2134 2323 1.065401 ACTAAAACCACGACACGACGA 59.935 47.619 0.00 0.00 37.03 4.20
2135 2324 1.480205 ACTAAAACCACGACACGACG 58.520 50.000 0.00 0.00 39.31 5.12
2136 2325 2.859538 TGAACTAAAACCACGACACGAC 59.140 45.455 0.00 0.00 0.00 4.34
2137 2326 3.162202 TGAACTAAAACCACGACACGA 57.838 42.857 0.00 0.00 0.00 4.35
2138 2327 3.929417 TTGAACTAAAACCACGACACG 57.071 42.857 0.00 0.00 0.00 4.49
2139 2328 6.748198 TCAAATTTGAACTAAAACCACGACAC 59.252 34.615 18.45 0.00 33.55 3.67
2140 2329 6.853720 TCAAATTTGAACTAAAACCACGACA 58.146 32.000 18.45 0.00 33.55 4.35
2141 2330 7.743520 TTCAAATTTGAACTAAAACCACGAC 57.256 32.000 26.01 0.00 41.88 4.34
2155 2344 7.194278 TCGTCGTGGTTTTAATTCAAATTTGA 58.806 30.769 16.91 16.91 34.92 2.69
2156 2345 7.166804 ACTCGTCGTGGTTTTAATTCAAATTTG 59.833 33.333 12.15 12.15 0.00 2.32
2157 2346 7.197703 ACTCGTCGTGGTTTTAATTCAAATTT 58.802 30.769 0.00 0.00 0.00 1.82
2158 2347 6.731164 ACTCGTCGTGGTTTTAATTCAAATT 58.269 32.000 0.00 0.00 0.00 1.82
2159 2348 6.308371 ACTCGTCGTGGTTTTAATTCAAAT 57.692 33.333 0.00 0.00 0.00 2.32
2160 2349 5.738118 ACTCGTCGTGGTTTTAATTCAAA 57.262 34.783 0.00 0.00 0.00 2.69
2161 2350 6.841443 TTACTCGTCGTGGTTTTAATTCAA 57.159 33.333 0.00 0.00 0.00 2.69
2162 2351 6.841443 TTTACTCGTCGTGGTTTTAATTCA 57.159 33.333 0.00 0.00 0.00 2.57
2163 2352 7.512297 TGATTTACTCGTCGTGGTTTTAATTC 58.488 34.615 0.00 0.00 0.00 2.17
2164 2353 7.385752 TCTGATTTACTCGTCGTGGTTTTAATT 59.614 33.333 0.00 0.00 0.00 1.40
2165 2354 6.869913 TCTGATTTACTCGTCGTGGTTTTAAT 59.130 34.615 0.00 0.00 0.00 1.40
2166 2355 6.215121 TCTGATTTACTCGTCGTGGTTTTAA 58.785 36.000 0.00 0.00 0.00 1.52
2167 2356 5.771469 TCTGATTTACTCGTCGTGGTTTTA 58.229 37.500 0.00 0.00 0.00 1.52
2168 2357 4.624015 TCTGATTTACTCGTCGTGGTTTT 58.376 39.130 0.00 0.00 0.00 2.43
2169 2358 4.247267 TCTGATTTACTCGTCGTGGTTT 57.753 40.909 0.00 0.00 0.00 3.27
2170 2359 3.928727 TCTGATTTACTCGTCGTGGTT 57.071 42.857 0.00 0.00 0.00 3.67
2171 2360 3.928727 TTCTGATTTACTCGTCGTGGT 57.071 42.857 0.00 0.00 0.00 4.16
2172 2361 3.551890 CCATTCTGATTTACTCGTCGTGG 59.448 47.826 0.00 0.00 0.00 4.94
2173 2362 4.421058 TCCATTCTGATTTACTCGTCGTG 58.579 43.478 0.00 0.00 0.00 4.35
2174 2363 4.398358 TCTCCATTCTGATTTACTCGTCGT 59.602 41.667 0.00 0.00 0.00 4.34
2175 2364 4.921547 TCTCCATTCTGATTTACTCGTCG 58.078 43.478 0.00 0.00 0.00 5.12
2176 2365 6.137794 TCTCTCCATTCTGATTTACTCGTC 57.862 41.667 0.00 0.00 0.00 4.20
2177 2366 5.654650 ACTCTCTCCATTCTGATTTACTCGT 59.345 40.000 0.00 0.00 0.00 4.18
2178 2367 6.142818 ACTCTCTCCATTCTGATTTACTCG 57.857 41.667 0.00 0.00 0.00 4.18
2179 2368 8.232913 AGTACTCTCTCCATTCTGATTTACTC 57.767 38.462 0.00 0.00 0.00 2.59
2180 2369 9.127277 GTAGTACTCTCTCCATTCTGATTTACT 57.873 37.037 0.00 0.00 0.00 2.24
2181 2370 9.127277 AGTAGTACTCTCTCCATTCTGATTTAC 57.873 37.037 0.00 0.00 0.00 2.01
2183 2372 9.702253 TTAGTAGTACTCTCTCCATTCTGATTT 57.298 33.333 5.96 0.00 0.00 2.17
2184 2373 9.875708 ATTAGTAGTACTCTCTCCATTCTGATT 57.124 33.333 5.96 0.00 0.00 2.57
2186 2375 9.781633 GTATTAGTAGTACTCTCTCCATTCTGA 57.218 37.037 5.96 0.00 0.00 3.27
2187 2376 9.787435 AGTATTAGTAGTACTCTCTCCATTCTG 57.213 37.037 5.96 0.00 0.00 3.02
2237 2426 7.596494 TGATGATCCTGCTTACTTTTGAAAAG 58.404 34.615 15.59 15.59 0.00 2.27
2239 2428 7.523293 TTGATGATCCTGCTTACTTTTGAAA 57.477 32.000 0.00 0.00 0.00 2.69
2240 2429 7.370383 GTTTGATGATCCTGCTTACTTTTGAA 58.630 34.615 0.00 0.00 0.00 2.69
2241 2430 6.071952 GGTTTGATGATCCTGCTTACTTTTGA 60.072 38.462 0.00 0.00 0.00 2.69
2277 2466 1.872952 CAGTGTGAAACGAGGCATCAA 59.127 47.619 0.00 0.00 42.39 2.57
2282 2471 0.861837 CAGTCAGTGTGAAACGAGGC 59.138 55.000 0.00 0.00 42.39 4.70
2284 2473 1.570813 TGCAGTCAGTGTGAAACGAG 58.429 50.000 0.00 0.00 42.39 4.18
2286 2475 2.823196 TTTGCAGTCAGTGTGAAACG 57.177 45.000 0.00 0.00 42.39 3.60
2287 2476 4.268405 CCAAATTTGCAGTCAGTGTGAAAC 59.732 41.667 12.92 0.00 37.35 2.78
2288 2477 4.431809 CCAAATTTGCAGTCAGTGTGAAA 58.568 39.130 12.92 0.00 0.00 2.69
2289 2478 3.737663 GCCAAATTTGCAGTCAGTGTGAA 60.738 43.478 12.92 0.00 0.00 3.18
2324 2542 5.576384 GTCTCTGTTGATCACAATCTGAGAC 59.424 44.000 23.37 23.37 43.62 3.36
2400 2618 0.037303 CATTCCTGCAGTGGTGTCCT 59.963 55.000 13.81 0.00 0.00 3.85
2412 2630 1.987807 ATGAGACGGGGGCATTCCTG 61.988 60.000 0.00 0.00 39.08 3.86
2413 2631 1.694169 ATGAGACGGGGGCATTCCT 60.694 57.895 0.00 0.00 35.33 3.36
2414 2632 1.227973 GATGAGACGGGGGCATTCC 60.228 63.158 0.00 0.00 0.00 3.01
2420 2638 2.786495 CCGAGTGATGAGACGGGGG 61.786 68.421 0.00 0.00 41.41 5.40
2434 2652 3.068732 TCAGATTGCTTAGGTGATCCGAG 59.931 47.826 0.00 0.00 39.05 4.63
2506 2724 1.358787 AGATTCAAAGGGCACATGGGA 59.641 47.619 0.00 0.00 0.00 4.37
2507 2725 1.479323 CAGATTCAAAGGGCACATGGG 59.521 52.381 0.00 0.00 0.00 4.00
2508 2726 1.134907 GCAGATTCAAAGGGCACATGG 60.135 52.381 0.00 0.00 0.00 3.66
2509 2727 1.822990 AGCAGATTCAAAGGGCACATG 59.177 47.619 0.00 0.00 0.00 3.21
2510 2728 2.097825 GAGCAGATTCAAAGGGCACAT 58.902 47.619 0.00 0.00 0.00 3.21
2511 2729 1.202915 TGAGCAGATTCAAAGGGCACA 60.203 47.619 0.00 0.00 0.00 4.57
2512 2730 1.200948 GTGAGCAGATTCAAAGGGCAC 59.799 52.381 0.00 0.00 0.00 5.01
2513 2731 1.538047 GTGAGCAGATTCAAAGGGCA 58.462 50.000 0.00 0.00 0.00 5.36
2514 2732 0.813821 GGTGAGCAGATTCAAAGGGC 59.186 55.000 0.00 0.00 0.00 5.19
2515 2733 2.205022 TGGTGAGCAGATTCAAAGGG 57.795 50.000 0.00 0.00 0.00 3.95
2516 2734 3.087031 ACATGGTGAGCAGATTCAAAGG 58.913 45.455 0.00 0.00 0.00 3.11
2517 2735 3.672511 GCACATGGTGAGCAGATTCAAAG 60.673 47.826 0.00 0.00 35.23 2.77
2518 2736 2.229543 GCACATGGTGAGCAGATTCAAA 59.770 45.455 0.00 0.00 35.23 2.69
2519 2737 1.814394 GCACATGGTGAGCAGATTCAA 59.186 47.619 0.00 0.00 35.23 2.69
2520 2738 1.456296 GCACATGGTGAGCAGATTCA 58.544 50.000 0.00 0.00 35.23 2.57
2521 2739 0.737219 GGCACATGGTGAGCAGATTC 59.263 55.000 0.00 0.00 35.63 2.52
2522 2740 0.038599 TGGCACATGGTGAGCAGATT 59.961 50.000 0.00 0.00 35.63 2.40
2523 2741 1.687014 TGGCACATGGTGAGCAGAT 59.313 52.632 0.00 0.00 35.63 2.90
2524 2742 3.159615 TGGCACATGGTGAGCAGA 58.840 55.556 0.00 0.00 35.63 4.26
2538 2756 0.324285 TGGGAATGTTGGCAAATGGC 59.676 50.000 0.00 0.00 43.74 4.40
2539 2757 2.236644 TGATGGGAATGTTGGCAAATGG 59.763 45.455 0.00 0.00 0.00 3.16
2540 2758 3.613494 TGATGGGAATGTTGGCAAATG 57.387 42.857 0.00 0.00 0.00 2.32
2541 2759 4.637387 TTTGATGGGAATGTTGGCAAAT 57.363 36.364 0.00 0.00 0.00 2.32
2542 2760 4.637387 ATTTGATGGGAATGTTGGCAAA 57.363 36.364 0.00 0.00 0.00 3.68
2543 2761 5.954153 ATATTTGATGGGAATGTTGGCAA 57.046 34.783 0.00 0.00 0.00 4.52
2544 2762 5.304101 GGTATATTTGATGGGAATGTTGGCA 59.696 40.000 0.00 0.00 0.00 4.92
2545 2763 5.304101 TGGTATATTTGATGGGAATGTTGGC 59.696 40.000 0.00 0.00 0.00 4.52
2546 2764 6.975196 TGGTATATTTGATGGGAATGTTGG 57.025 37.500 0.00 0.00 0.00 3.77
2547 2765 7.780064 TGTTGGTATATTTGATGGGAATGTTG 58.220 34.615 0.00 0.00 0.00 3.33
2548 2766 7.969690 TGTTGGTATATTTGATGGGAATGTT 57.030 32.000 0.00 0.00 0.00 2.71
2549 2767 7.564660 ACATGTTGGTATATTTGATGGGAATGT 59.435 33.333 0.00 0.00 0.00 2.71
2550 2768 7.954835 ACATGTTGGTATATTTGATGGGAATG 58.045 34.615 0.00 0.00 0.00 2.67
2551 2769 7.784073 TGACATGTTGGTATATTTGATGGGAAT 59.216 33.333 0.00 0.00 0.00 3.01
2552 2770 7.068103 GTGACATGTTGGTATATTTGATGGGAA 59.932 37.037 0.00 0.00 0.00 3.97
2553 2771 6.545666 GTGACATGTTGGTATATTTGATGGGA 59.454 38.462 0.00 0.00 0.00 4.37
2554 2772 6.513230 CGTGACATGTTGGTATATTTGATGGG 60.513 42.308 0.00 0.00 0.00 4.00
2555 2773 6.429624 CGTGACATGTTGGTATATTTGATGG 58.570 40.000 0.00 0.00 0.00 3.51
2556 2774 5.909054 GCGTGACATGTTGGTATATTTGATG 59.091 40.000 0.00 0.00 0.00 3.07
2557 2775 5.822519 AGCGTGACATGTTGGTATATTTGAT 59.177 36.000 0.00 0.00 0.00 2.57
2558 2776 5.182487 AGCGTGACATGTTGGTATATTTGA 58.818 37.500 0.00 0.00 0.00 2.69
2559 2777 5.484173 AGCGTGACATGTTGGTATATTTG 57.516 39.130 0.00 0.00 0.00 2.32


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.