Multiple sequence alignment - TraesCS5A01G153400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G153400 chr5A 100.000 2492 0 0 1 2492 330963051 330965542 0.000000e+00 4602.0
1 TraesCS5A01G153400 chr5B 89.878 1146 67 26 839 1956 281644901 281643777 0.000000e+00 1428.0
2 TraesCS5A01G153400 chr5B 89.542 612 36 5 6 590 281645684 281645074 0.000000e+00 750.0
3 TraesCS5A01G153400 chr5B 91.954 174 8 3 633 802 281645079 281644908 3.200000e-59 239.0
4 TraesCS5A01G153400 chr5B 93.043 115 8 0 1967 2081 281643285 281643171 4.260000e-38 169.0
5 TraesCS5A01G153400 chr5D 91.246 674 34 11 839 1492 246766189 246766857 0.000000e+00 894.0
6 TraesCS5A01G153400 chr5D 85.578 839 59 25 6 802 246765364 246766182 0.000000e+00 822.0
7 TraesCS5A01G153400 chr1B 90.441 408 37 2 2086 2492 312551620 312552026 1.010000e-148 536.0
8 TraesCS5A01G153400 chr2D 89.268 410 42 2 2083 2491 348972140 348971732 1.710000e-141 512.0
9 TraesCS5A01G153400 chr2D 87.167 413 47 4 2084 2491 638405334 638405745 4.850000e-127 464.0
10 TraesCS5A01G153400 chr7B 89.027 401 41 2 2094 2492 15772649 15773048 6.190000e-136 494.0
11 TraesCS5A01G153400 chr7B 77.560 459 76 16 1029 1482 700630362 700629926 4.110000e-63 252.0
12 TraesCS5A01G153400 chr2B 88.164 414 43 4 2082 2492 789613883 789614293 2.880000e-134 488.0
13 TraesCS5A01G153400 chr3A 89.091 385 41 1 2107 2491 516074432 516074049 6.240000e-131 477.0
14 TraesCS5A01G153400 chr3A 87.685 406 47 3 2086 2489 712868599 712869003 1.040000e-128 470.0
15 TraesCS5A01G153400 chr1A 87.010 408 50 3 2086 2491 500357915 500358321 8.120000e-125 457.0
16 TraesCS5A01G153400 chr6A 86.308 409 52 2 2086 2491 69127435 69127842 2.270000e-120 442.0
17 TraesCS5A01G153400 chr6A 86.567 67 7 2 1412 1477 529048056 529047991 3.440000e-09 73.1
18 TraesCS5A01G153400 chr7D 78.947 456 67 21 1029 1483 611442146 611441719 1.460000e-72 283.0
19 TraesCS5A01G153400 chr7D 77.802 455 71 19 1029 1483 611468075 611467651 1.140000e-63 254.0
20 TraesCS5A01G153400 chr4D 78.091 461 68 24 1029 1483 117663028 117662595 6.840000e-66 261.0
21 TraesCS5A01G153400 chr4D 77.560 459 68 15 1029 1483 117706350 117705923 6.880000e-61 244.0
22 TraesCS5A01G153400 chr4B 77.609 460 72 19 1029 1483 179751167 179751600 1.480000e-62 250.0
23 TraesCS5A01G153400 chr4A 77.223 461 72 18 1029 1483 456336334 456336767 3.200000e-59 239.0
24 TraesCS5A01G153400 chr4A 77.007 461 73 18 1029 1483 457568322 457568755 1.490000e-57 233.0
25 TraesCS5A01G153400 chr6D 86.567 67 7 2 1412 1477 384533975 384533910 3.440000e-09 73.1
26 TraesCS5A01G153400 chr6B 81.818 88 10 4 1393 1477 574735919 574735835 4.450000e-08 69.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G153400 chr5A 330963051 330965542 2491 False 4602.0 4602 100.00000 1 2492 1 chr5A.!!$F1 2491
1 TraesCS5A01G153400 chr5B 281643171 281645684 2513 True 646.5 1428 91.10425 6 2081 4 chr5B.!!$R1 2075
2 TraesCS5A01G153400 chr5D 246765364 246766857 1493 False 858.0 894 88.41200 6 1492 2 chr5D.!!$F1 1486

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
854 901 0.24912 TGACATTCTGCCCGTACAGG 59.751 55.0 2.48 0.0 38.26 4.0 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1809 1887 0.032813 CCCCATGAGAAGGCCAACAT 60.033 55.0 5.01 1.54 0.0 2.71 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
78 79 8.204836 GGAGAACTTAAGCATGGAATACTCTAA 58.795 37.037 1.29 0.00 0.00 2.10
317 321 2.364970 TGGAACCATGGCAAAACAGAAG 59.635 45.455 13.04 0.00 0.00 2.85
325 329 4.122143 TGGCAAAACAGAAGAAACTTGG 57.878 40.909 0.00 0.00 0.00 3.61
398 404 6.183360 ACACAATCTTGAAAACAATGACCCAT 60.183 34.615 0.00 0.00 0.00 4.00
432 438 5.061560 GCATGAAACGAGAGACTCTTAACAG 59.938 44.000 6.40 0.00 0.00 3.16
441 467 6.120507 AGAGACTCTTAACAGAATTGCCTT 57.879 37.500 0.00 0.00 0.00 4.35
474 500 6.946340 ACCCAAAAAGATTTCTGTGAGTTTT 58.054 32.000 0.00 0.00 0.00 2.43
605 636 4.390603 TGTTTGACGTGAAATATTCCCTCG 59.609 41.667 2.88 9.33 0.00 4.63
622 653 3.751175 CCCTCGAAGTCAAGTAATGCAAA 59.249 43.478 0.00 0.00 0.00 3.68
733 775 1.170919 AGCACACAGAAAGCTGCTGG 61.171 55.000 18.01 10.94 46.26 4.85
760 807 2.372690 CGGCTACGCGCATATCCAC 61.373 63.158 5.73 0.00 41.67 4.02
802 849 3.041940 GTTGCCACGGTCACGGAG 61.042 66.667 0.00 0.00 46.48 4.63
803 850 3.228017 TTGCCACGGTCACGGAGA 61.228 61.111 0.00 0.00 46.48 3.71
804 851 2.798364 TTGCCACGGTCACGGAGAA 61.798 57.895 0.00 0.00 46.48 2.87
807 854 2.571216 CCACGGTCACGGAGAAGGT 61.571 63.158 0.00 0.00 46.48 3.50
808 855 1.366366 CACGGTCACGGAGAAGGTT 59.634 57.895 0.00 0.00 46.48 3.50
809 856 0.666577 CACGGTCACGGAGAAGGTTC 60.667 60.000 0.00 0.00 46.48 3.62
810 857 0.826672 ACGGTCACGGAGAAGGTTCT 60.827 55.000 0.00 0.00 46.48 3.01
811 858 1.171308 CGGTCACGGAGAAGGTTCTA 58.829 55.000 0.00 0.00 37.73 2.10
812 859 1.542915 CGGTCACGGAGAAGGTTCTAA 59.457 52.381 0.00 0.00 37.73 2.10
813 860 2.415625 CGGTCACGGAGAAGGTTCTAAG 60.416 54.545 0.00 0.00 37.73 2.18
814 861 2.608268 GTCACGGAGAAGGTTCTAAGC 58.392 52.381 0.00 0.00 37.73 3.09
815 862 1.549170 TCACGGAGAAGGTTCTAAGCC 59.451 52.381 0.00 0.00 37.73 4.35
816 863 1.550976 CACGGAGAAGGTTCTAAGCCT 59.449 52.381 0.00 0.00 37.73 4.58
817 864 1.550976 ACGGAGAAGGTTCTAAGCCTG 59.449 52.381 0.00 0.00 37.73 4.85
818 865 1.825474 CGGAGAAGGTTCTAAGCCTGA 59.175 52.381 0.00 0.00 37.73 3.86
819 866 2.233922 CGGAGAAGGTTCTAAGCCTGAA 59.766 50.000 0.00 0.00 37.73 3.02
820 867 3.601435 GGAGAAGGTTCTAAGCCTGAAC 58.399 50.000 5.76 5.76 42.00 3.18
821 868 3.262151 GGAGAAGGTTCTAAGCCTGAACT 59.738 47.826 11.90 0.00 42.27 3.01
822 869 4.500127 GAGAAGGTTCTAAGCCTGAACTC 58.500 47.826 11.90 5.24 42.27 3.01
823 870 4.164204 AGAAGGTTCTAAGCCTGAACTCT 58.836 43.478 11.90 6.90 42.27 3.24
824 871 4.221924 AGAAGGTTCTAAGCCTGAACTCTC 59.778 45.833 11.90 9.35 42.27 3.20
825 872 3.785364 AGGTTCTAAGCCTGAACTCTCT 58.215 45.455 11.90 1.73 42.27 3.10
826 873 3.513515 AGGTTCTAAGCCTGAACTCTCTG 59.486 47.826 11.90 0.00 42.27 3.35
827 874 3.368948 GGTTCTAAGCCTGAACTCTCTGG 60.369 52.174 11.90 0.00 42.27 3.86
828 875 3.458044 TCTAAGCCTGAACTCTCTGGA 57.542 47.619 2.53 0.00 41.99 3.86
829 876 3.779444 TCTAAGCCTGAACTCTCTGGAA 58.221 45.455 2.53 0.00 41.99 3.53
830 877 4.357325 TCTAAGCCTGAACTCTCTGGAAT 58.643 43.478 2.53 0.00 41.99 3.01
831 878 4.780021 TCTAAGCCTGAACTCTCTGGAATT 59.220 41.667 2.53 0.00 41.99 2.17
832 879 5.958380 TCTAAGCCTGAACTCTCTGGAATTA 59.042 40.000 2.53 0.99 41.99 1.40
833 880 5.707066 AAGCCTGAACTCTCTGGAATTAT 57.293 39.130 2.53 0.00 41.99 1.28
834 881 5.707066 AGCCTGAACTCTCTGGAATTATT 57.293 39.130 2.53 0.00 41.99 1.40
835 882 6.072199 AGCCTGAACTCTCTGGAATTATTT 57.928 37.500 2.53 0.00 41.99 1.40
836 883 5.884792 AGCCTGAACTCTCTGGAATTATTTG 59.115 40.000 2.53 0.00 41.99 2.32
837 884 5.882557 GCCTGAACTCTCTGGAATTATTTGA 59.117 40.000 2.53 0.00 41.99 2.69
842 889 8.950210 TGAACTCTCTGGAATTATTTGACATTC 58.050 33.333 0.00 0.00 0.00 2.67
844 891 8.503458 ACTCTCTGGAATTATTTGACATTCTG 57.497 34.615 0.00 0.00 31.16 3.02
854 901 0.249120 TGACATTCTGCCCGTACAGG 59.751 55.000 2.48 0.00 38.26 4.00
866 913 3.078836 TACAGGGCCCGTACCAGC 61.079 66.667 18.44 0.00 0.00 4.85
877 924 3.181465 GCCCGTACCAGCATATATAGCAT 60.181 47.826 9.01 0.00 0.00 3.79
887 934 5.884232 CAGCATATATAGCATCAACACCCAT 59.116 40.000 9.01 0.00 0.00 4.00
891 938 2.202650 GCATCAACACCCATGCGC 60.203 61.111 0.00 0.00 36.33 6.09
909 956 0.813184 GCCACACCATGTCCATCAAG 59.187 55.000 0.00 0.00 0.00 3.02
911 958 0.813184 CACACCATGTCCATCAAGCC 59.187 55.000 0.00 0.00 0.00 4.35
912 959 0.405198 ACACCATGTCCATCAAGCCA 59.595 50.000 0.00 0.00 0.00 4.75
914 961 0.677731 ACCATGTCCATCAAGCCACG 60.678 55.000 0.00 0.00 0.00 4.94
915 962 0.677731 CCATGTCCATCAAGCCACGT 60.678 55.000 0.00 0.00 0.00 4.49
917 964 0.324614 ATGTCCATCAAGCCACGTGA 59.675 50.000 19.30 0.00 0.00 4.35
918 965 0.324614 TGTCCATCAAGCCACGTGAT 59.675 50.000 19.30 1.58 36.11 3.06
959 1019 4.342378 TCACCAGCAAGATACATAGAGGTC 59.658 45.833 0.00 0.00 0.00 3.85
980 1042 0.956633 CAGAGAAGCCAGCAAGCAAA 59.043 50.000 0.55 0.00 34.23 3.68
1209 1271 2.417936 GAGTTCTCCCGGATCGGC 59.582 66.667 0.73 0.00 46.86 5.54
1496 1567 4.799564 TGATGGCCAATTTGTAAAGGAC 57.200 40.909 10.96 0.00 0.00 3.85
1499 1570 1.890489 GGCCAATTTGTAAAGGACGGT 59.110 47.619 0.00 0.00 0.00 4.83
1526 1597 6.292114 GGTTTCATTTCATTCGTTCGCTTTTT 60.292 34.615 0.00 0.00 0.00 1.94
1555 1626 3.061965 GTGTTTTTGACATGTGGTTGCAC 59.938 43.478 1.15 1.71 41.10 4.57
1567 1638 1.408340 TGGTTGCACTTGTTCACATGG 59.592 47.619 0.00 0.00 0.00 3.66
1572 1643 1.888512 GCACTTGTTCACATGGTGGAT 59.111 47.619 0.00 0.00 33.87 3.41
1587 1658 5.070770 TGGTGGATGTTTCAATTGTATGC 57.929 39.130 5.13 2.93 0.00 3.14
1590 1661 5.104374 GTGGATGTTTCAATTGTATGCTGG 58.896 41.667 5.13 0.00 0.00 4.85
1591 1662 4.160065 TGGATGTTTCAATTGTATGCTGGG 59.840 41.667 5.13 0.00 0.00 4.45
1594 1665 2.831526 GTTTCAATTGTATGCTGGGGGT 59.168 45.455 5.13 0.00 0.00 4.95
1612 1683 2.029380 GGGTTTGGGTGTGATGCTTAAC 60.029 50.000 0.00 0.00 0.00 2.01
1616 1687 5.356426 GTTTGGGTGTGATGCTTAACTTTT 58.644 37.500 0.00 0.00 0.00 2.27
1617 1688 4.582701 TGGGTGTGATGCTTAACTTTTG 57.417 40.909 0.00 0.00 0.00 2.44
1618 1689 3.957497 TGGGTGTGATGCTTAACTTTTGT 59.043 39.130 0.00 0.00 0.00 2.83
1619 1690 4.404073 TGGGTGTGATGCTTAACTTTTGTT 59.596 37.500 0.00 0.00 45.76 2.83
1621 1692 5.234116 GGGTGTGATGCTTAACTTTTGTTTG 59.766 40.000 0.00 0.00 43.32 2.93
1631 1702 9.915629 TGCTTAACTTTTGTTTGTTCTTCTTTA 57.084 25.926 0.00 0.00 43.32 1.85
1709 1785 6.732896 TCATACCTCTTCCTATTTGACCTC 57.267 41.667 0.00 0.00 0.00 3.85
1713 1789 4.651962 ACCTCTTCCTATTTGACCTCTAGC 59.348 45.833 0.00 0.00 0.00 3.42
1724 1800 9.421806 CTATTTGACCTCTAGCTCATTGATAAG 57.578 37.037 0.00 0.00 0.00 1.73
1730 1806 8.261349 ACCTCTAGCTCATTGATAAGAATCTT 57.739 34.615 0.00 0.00 32.93 2.40
1735 1811 7.244166 AGCTCATTGATAAGAATCTTGTTCG 57.756 36.000 5.64 0.00 32.93 3.95
1765 1841 6.075315 AGTTTAAGCAAATGGTAAACCCTCT 58.925 36.000 0.00 0.00 32.74 3.69
1805 1883 9.109393 TGAATAGATAATAAAGGATATTGGCGC 57.891 33.333 0.00 0.00 0.00 6.53
1806 1884 8.451908 AATAGATAATAAAGGATATTGGCGCC 57.548 34.615 22.73 22.73 0.00 6.53
1807 1885 4.876107 AGATAATAAAGGATATTGGCGCCG 59.124 41.667 23.90 0.00 0.00 6.46
1808 1886 1.165270 ATAAAGGATATTGGCGCCGC 58.835 50.000 23.90 0.00 0.00 6.53
1809 1887 0.179043 TAAAGGATATTGGCGCCGCA 60.179 50.000 23.90 11.90 0.00 5.69
1810 1888 0.823356 AAAGGATATTGGCGCCGCAT 60.823 50.000 23.90 18.78 0.00 4.73
1811 1889 1.518056 AAGGATATTGGCGCCGCATG 61.518 55.000 23.90 0.00 0.00 4.06
1831 1909 2.360191 GGCCTTCTCATGGGGCAA 59.640 61.111 16.93 0.00 46.87 4.52
1846 1924 1.349357 GGGCAACTCACTTCCTTCTCT 59.651 52.381 0.00 0.00 0.00 3.10
1862 1940 1.881973 TCTCTCCTTTGCATGCAACAC 59.118 47.619 31.99 0.00 35.46 3.32
1879 1957 4.715896 CAACACTAACACATGAGCATGAC 58.284 43.478 16.70 0.00 41.20 3.06
1880 1958 4.006780 ACACTAACACATGAGCATGACA 57.993 40.909 16.70 0.00 41.20 3.58
1881 1959 4.582869 ACACTAACACATGAGCATGACAT 58.417 39.130 16.70 0.00 41.20 3.06
1882 1960 4.633126 ACACTAACACATGAGCATGACATC 59.367 41.667 16.70 0.00 41.20 3.06
1929 2012 8.293114 TGAATTTAAAAAGAATCTCAAACCGC 57.707 30.769 0.00 0.00 0.00 5.68
1931 2014 7.873739 ATTTAAAAAGAATCTCAAACCGCTG 57.126 32.000 0.00 0.00 0.00 5.18
1932 2015 3.923017 AAAAGAATCTCAAACCGCTGG 57.077 42.857 0.00 0.00 0.00 4.85
1939 2022 2.033448 CAAACCGCTGGCCTGGTA 59.967 61.111 14.10 0.00 37.54 3.25
1949 2032 2.753043 GCCTGGTAGACGGTCCGA 60.753 66.667 20.51 0.00 0.00 4.55
1956 2039 2.498481 TGGTAGACGGTCCGATTTCATT 59.502 45.455 20.51 0.00 0.00 2.57
1957 2040 3.121544 GGTAGACGGTCCGATTTCATTC 58.878 50.000 20.51 2.64 0.00 2.67
1958 2041 1.922570 AGACGGTCCGATTTCATTCG 58.077 50.000 20.51 0.00 38.83 3.34
1960 2043 1.587034 GACGGTCCGATTTCATTCGTC 59.413 52.381 20.51 0.00 37.42 4.20
1961 2044 1.067425 ACGGTCCGATTTCATTCGTCA 60.067 47.619 20.51 0.00 37.42 4.35
1962 2045 1.996898 CGGTCCGATTTCATTCGTCAA 59.003 47.619 4.91 0.00 37.42 3.18
1965 2529 2.006888 TCCGATTTCATTCGTCAAGGC 58.993 47.619 0.00 0.00 37.42 4.35
1991 2555 1.423921 ACCCACCGATGAAAGAAAGGT 59.576 47.619 0.00 0.00 35.24 3.50
2026 2590 4.336532 AACGGTTTGCGAGATAAATCAC 57.663 40.909 0.00 0.00 0.00 3.06
2040 2604 9.221775 CGAGATAAATCACTTTTAAAATTCCCG 57.778 33.333 0.09 0.00 33.60 5.14
2060 2624 5.995282 TCCCGTTTAGCAACTAATATGATGG 59.005 40.000 0.00 0.00 0.00 3.51
2065 2629 7.011016 CGTTTAGCAACTAATATGATGGTGTCA 59.989 37.037 0.00 0.00 42.06 3.58
2087 2651 7.692460 TCAGCATGATGTGTAAGATTTCTTT 57.308 32.000 11.32 0.00 42.56 2.52
2088 2652 8.114331 TCAGCATGATGTGTAAGATTTCTTTT 57.886 30.769 11.32 0.00 42.56 2.27
2089 2653 8.579006 TCAGCATGATGTGTAAGATTTCTTTTT 58.421 29.630 11.32 0.00 42.56 1.94
2153 2717 5.828747 ACAATCATTCATTACAGCATCTGC 58.171 37.500 0.00 0.00 42.49 4.26
2154 2718 5.220381 CAATCATTCATTACAGCATCTGCC 58.780 41.667 0.00 0.00 43.38 4.85
2155 2719 3.888583 TCATTCATTACAGCATCTGCCA 58.111 40.909 0.00 0.00 43.38 4.92
2156 2720 3.628942 TCATTCATTACAGCATCTGCCAC 59.371 43.478 0.00 0.00 43.38 5.01
2157 2721 2.785540 TCATTACAGCATCTGCCACA 57.214 45.000 0.00 0.00 43.38 4.17
2158 2722 2.358957 TCATTACAGCATCTGCCACAC 58.641 47.619 0.00 0.00 43.38 3.82
2159 2723 2.086094 CATTACAGCATCTGCCACACA 58.914 47.619 0.00 0.00 43.38 3.72
2170 2734 3.030652 CCACACAGGCCGAAACAC 58.969 61.111 0.00 0.00 0.00 3.32
2171 2735 2.551912 CCACACAGGCCGAAACACC 61.552 63.158 0.00 0.00 0.00 4.16
2172 2736 1.821759 CACACAGGCCGAAACACCA 60.822 57.895 0.00 0.00 0.00 4.17
2173 2737 1.150536 ACACAGGCCGAAACACCAT 59.849 52.632 0.00 0.00 0.00 3.55
2174 2738 0.467290 ACACAGGCCGAAACACCATT 60.467 50.000 0.00 0.00 0.00 3.16
2175 2739 1.202830 ACACAGGCCGAAACACCATTA 60.203 47.619 0.00 0.00 0.00 1.90
2176 2740 1.883275 CACAGGCCGAAACACCATTAA 59.117 47.619 0.00 0.00 0.00 1.40
2177 2741 2.491693 CACAGGCCGAAACACCATTAAT 59.508 45.455 0.00 0.00 0.00 1.40
2178 2742 3.692101 CACAGGCCGAAACACCATTAATA 59.308 43.478 0.00 0.00 0.00 0.98
2179 2743 4.156922 CACAGGCCGAAACACCATTAATAA 59.843 41.667 0.00 0.00 0.00 1.40
2180 2744 4.767928 ACAGGCCGAAACACCATTAATAAA 59.232 37.500 0.00 0.00 0.00 1.40
2181 2745 5.244178 ACAGGCCGAAACACCATTAATAAAA 59.756 36.000 0.00 0.00 0.00 1.52
2182 2746 6.159988 CAGGCCGAAACACCATTAATAAAAA 58.840 36.000 0.00 0.00 0.00 1.94
2183 2747 6.090223 CAGGCCGAAACACCATTAATAAAAAC 59.910 38.462 0.00 0.00 0.00 2.43
2184 2748 5.927115 GGCCGAAACACCATTAATAAAAACA 59.073 36.000 0.00 0.00 0.00 2.83
2185 2749 6.128769 GGCCGAAACACCATTAATAAAAACAC 60.129 38.462 0.00 0.00 0.00 3.32
2186 2750 6.643360 GCCGAAACACCATTAATAAAAACACT 59.357 34.615 0.00 0.00 0.00 3.55
2187 2751 7.358848 GCCGAAACACCATTAATAAAAACACTG 60.359 37.037 0.00 0.00 0.00 3.66
2188 2752 7.650104 CCGAAACACCATTAATAAAAACACTGT 59.350 33.333 0.00 0.00 0.00 3.55
2189 2753 8.687301 CGAAACACCATTAATAAAAACACTGTC 58.313 33.333 0.00 0.00 0.00 3.51
2190 2754 9.522804 GAAACACCATTAATAAAAACACTGTCA 57.477 29.630 0.00 0.00 0.00 3.58
2191 2755 9.528018 AAACACCATTAATAAAAACACTGTCAG 57.472 29.630 0.00 0.00 0.00 3.51
2192 2756 7.657336 ACACCATTAATAAAAACACTGTCAGG 58.343 34.615 4.53 0.00 0.00 3.86
2193 2757 6.586082 CACCATTAATAAAAACACTGTCAGGC 59.414 38.462 4.53 0.00 0.00 4.85
2194 2758 6.099341 CCATTAATAAAAACACTGTCAGGCC 58.901 40.000 4.53 0.00 0.00 5.19
2195 2759 6.071391 CCATTAATAAAAACACTGTCAGGCCT 60.071 38.462 0.00 0.00 0.00 5.19
2196 2760 7.122055 CCATTAATAAAAACACTGTCAGGCCTA 59.878 37.037 3.98 0.00 0.00 3.93
2197 2761 8.686334 CATTAATAAAAACACTGTCAGGCCTAT 58.314 33.333 3.98 0.00 0.00 2.57
2198 2762 8.644374 TTAATAAAAACACTGTCAGGCCTATT 57.356 30.769 3.98 0.00 0.00 1.73
2199 2763 9.742144 TTAATAAAAACACTGTCAGGCCTATTA 57.258 29.630 3.98 0.00 0.00 0.98
2200 2764 8.823220 AATAAAAACACTGTCAGGCCTATTAT 57.177 30.769 3.98 1.50 0.00 1.28
2201 2765 8.823220 ATAAAAACACTGTCAGGCCTATTATT 57.177 30.769 3.98 0.00 0.00 1.40
2202 2766 9.914834 ATAAAAACACTGTCAGGCCTATTATTA 57.085 29.630 3.98 0.00 0.00 0.98
2203 2767 8.644374 AAAAACACTGTCAGGCCTATTATTAA 57.356 30.769 3.98 0.00 0.00 1.40
2204 2768 8.644374 AAAACACTGTCAGGCCTATTATTAAA 57.356 30.769 3.98 0.00 0.00 1.52
2205 2769 8.644374 AAACACTGTCAGGCCTATTATTAAAA 57.356 30.769 3.98 0.00 0.00 1.52
2206 2770 7.625828 ACACTGTCAGGCCTATTATTAAAAC 57.374 36.000 3.98 0.00 0.00 2.43
2207 2771 7.402862 ACACTGTCAGGCCTATTATTAAAACT 58.597 34.615 3.98 0.00 0.00 2.66
2208 2772 8.545472 ACACTGTCAGGCCTATTATTAAAACTA 58.455 33.333 3.98 0.00 0.00 2.24
2209 2773 9.391006 CACTGTCAGGCCTATTATTAAAACTAA 57.609 33.333 3.98 0.00 0.00 2.24
2210 2774 9.969001 ACTGTCAGGCCTATTATTAAAACTAAA 57.031 29.630 3.98 0.00 0.00 1.85
2212 2776 9.969001 TGTCAGGCCTATTATTAAAACTAAACT 57.031 29.630 3.98 0.00 0.00 2.66
2228 2792 9.726438 AAAACTAAACTTAGCTATCTCATGTGT 57.274 29.630 0.00 0.00 34.09 3.72
2229 2793 8.934507 AACTAAACTTAGCTATCTCATGTGTC 57.065 34.615 0.00 0.00 34.09 3.67
2230 2794 8.067751 ACTAAACTTAGCTATCTCATGTGTCA 57.932 34.615 0.00 0.00 34.09 3.58
2231 2795 7.976734 ACTAAACTTAGCTATCTCATGTGTCAC 59.023 37.037 0.00 0.00 34.09 3.67
2232 2796 5.269505 ACTTAGCTATCTCATGTGTCACC 57.730 43.478 0.00 0.00 0.00 4.02
2233 2797 4.711846 ACTTAGCTATCTCATGTGTCACCA 59.288 41.667 0.00 0.00 0.00 4.17
2234 2798 5.365025 ACTTAGCTATCTCATGTGTCACCAT 59.635 40.000 0.00 0.00 0.00 3.55
2235 2799 6.551227 ACTTAGCTATCTCATGTGTCACCATA 59.449 38.462 0.00 0.00 0.00 2.74
2236 2800 7.234371 ACTTAGCTATCTCATGTGTCACCATAT 59.766 37.037 0.00 0.00 0.00 1.78
2237 2801 6.430962 AGCTATCTCATGTGTCACCATATT 57.569 37.500 0.00 0.00 0.00 1.28
2238 2802 7.544804 AGCTATCTCATGTGTCACCATATTA 57.455 36.000 0.00 0.00 0.00 0.98
2239 2803 7.609960 AGCTATCTCATGTGTCACCATATTAG 58.390 38.462 0.00 0.00 0.00 1.73
2240 2804 6.312426 GCTATCTCATGTGTCACCATATTAGC 59.688 42.308 0.00 3.37 0.00 3.09
2241 2805 5.876651 TCTCATGTGTCACCATATTAGCT 57.123 39.130 0.00 0.00 0.00 3.32
2242 2806 6.239217 TCTCATGTGTCACCATATTAGCTT 57.761 37.500 0.00 0.00 0.00 3.74
2243 2807 6.283694 TCTCATGTGTCACCATATTAGCTTC 58.716 40.000 0.00 0.00 0.00 3.86
2244 2808 5.368145 TCATGTGTCACCATATTAGCTTCC 58.632 41.667 0.00 0.00 0.00 3.46
2245 2809 4.150897 TGTGTCACCATATTAGCTTCCC 57.849 45.455 0.00 0.00 0.00 3.97
2246 2810 3.780294 TGTGTCACCATATTAGCTTCCCT 59.220 43.478 0.00 0.00 0.00 4.20
2247 2811 4.130118 GTGTCACCATATTAGCTTCCCTG 58.870 47.826 0.00 0.00 0.00 4.45
2248 2812 3.142174 GTCACCATATTAGCTTCCCTGC 58.858 50.000 0.00 0.00 0.00 4.85
2249 2813 3.048600 TCACCATATTAGCTTCCCTGCT 58.951 45.455 0.00 0.00 46.11 4.24
2250 2814 4.040461 GTCACCATATTAGCTTCCCTGCTA 59.960 45.833 0.00 0.00 43.74 3.49
2258 2822 5.904984 TTAGCTTCCCTGCTAATATTGGA 57.095 39.130 2.52 0.00 46.63 3.53
2259 2823 4.796110 AGCTTCCCTGCTAATATTGGAA 57.204 40.909 2.52 3.76 42.10 3.53
2260 2824 5.129368 AGCTTCCCTGCTAATATTGGAAA 57.871 39.130 2.52 0.00 42.10 3.13
2261 2825 5.709594 AGCTTCCCTGCTAATATTGGAAAT 58.290 37.500 2.52 0.00 42.10 2.17
2262 2826 5.772169 AGCTTCCCTGCTAATATTGGAAATC 59.228 40.000 2.52 0.55 42.10 2.17
2263 2827 5.772169 GCTTCCCTGCTAATATTGGAAATCT 59.228 40.000 2.52 0.00 34.85 2.40
2264 2828 6.266330 GCTTCCCTGCTAATATTGGAAATCTT 59.734 38.462 2.52 0.00 34.85 2.40
2265 2829 7.201947 GCTTCCCTGCTAATATTGGAAATCTTT 60.202 37.037 2.52 0.00 34.85 2.52
2266 2830 9.354673 CTTCCCTGCTAATATTGGAAATCTTTA 57.645 33.333 2.52 0.00 34.85 1.85
2267 2831 8.691661 TCCCTGCTAATATTGGAAATCTTTAC 57.308 34.615 2.52 0.00 0.00 2.01
2268 2832 8.278639 TCCCTGCTAATATTGGAAATCTTTACA 58.721 33.333 2.52 0.00 0.00 2.41
2269 2833 9.082313 CCCTGCTAATATTGGAAATCTTTACAT 57.918 33.333 2.52 0.00 29.62 2.29
2273 2837 9.118236 GCTAATATTGGAAATCTTTACATTCGC 57.882 33.333 2.52 0.00 29.62 4.70
2274 2838 9.612620 CTAATATTGGAAATCTTTACATTCGCC 57.387 33.333 0.00 0.00 29.62 5.54
2275 2839 5.913137 ATTGGAAATCTTTACATTCGCCA 57.087 34.783 0.00 0.00 29.62 5.69
2276 2840 4.963276 TGGAAATCTTTACATTCGCCAG 57.037 40.909 0.00 0.00 0.00 4.85
2277 2841 3.128589 TGGAAATCTTTACATTCGCCAGC 59.871 43.478 0.00 0.00 0.00 4.85
2278 2842 3.128589 GGAAATCTTTACATTCGCCAGCA 59.871 43.478 0.00 0.00 0.00 4.41
2279 2843 4.202050 GGAAATCTTTACATTCGCCAGCAT 60.202 41.667 0.00 0.00 0.00 3.79
2280 2844 4.558538 AATCTTTACATTCGCCAGCATC 57.441 40.909 0.00 0.00 0.00 3.91
2281 2845 3.266510 TCTTTACATTCGCCAGCATCT 57.733 42.857 0.00 0.00 0.00 2.90
2282 2846 3.609853 TCTTTACATTCGCCAGCATCTT 58.390 40.909 0.00 0.00 0.00 2.40
2283 2847 4.009675 TCTTTACATTCGCCAGCATCTTT 58.990 39.130 0.00 0.00 0.00 2.52
2284 2848 3.763097 TTACATTCGCCAGCATCTTTG 57.237 42.857 0.00 0.00 0.00 2.77
2285 2849 1.825090 ACATTCGCCAGCATCTTTGA 58.175 45.000 0.00 0.00 0.00 2.69
2286 2850 2.161855 ACATTCGCCAGCATCTTTGAA 58.838 42.857 0.00 0.00 0.00 2.69
2287 2851 2.557924 ACATTCGCCAGCATCTTTGAAA 59.442 40.909 0.00 0.00 0.00 2.69
2288 2852 3.194116 ACATTCGCCAGCATCTTTGAAAT 59.806 39.130 0.00 0.00 0.00 2.17
2289 2853 4.398988 ACATTCGCCAGCATCTTTGAAATA 59.601 37.500 0.00 0.00 0.00 1.40
2290 2854 4.355543 TTCGCCAGCATCTTTGAAATAC 57.644 40.909 0.00 0.00 0.00 1.89
2291 2855 3.609853 TCGCCAGCATCTTTGAAATACT 58.390 40.909 0.00 0.00 0.00 2.12
2292 2856 3.623060 TCGCCAGCATCTTTGAAATACTC 59.377 43.478 0.00 0.00 0.00 2.59
2293 2857 3.374988 CGCCAGCATCTTTGAAATACTCA 59.625 43.478 0.00 0.00 0.00 3.41
2294 2858 4.142622 CGCCAGCATCTTTGAAATACTCAA 60.143 41.667 0.00 0.00 42.48 3.02
2295 2859 5.449588 CGCCAGCATCTTTGAAATACTCAAT 60.450 40.000 0.00 0.00 43.64 2.57
2296 2860 5.747197 GCCAGCATCTTTGAAATACTCAATG 59.253 40.000 0.00 0.00 43.64 2.82
2297 2861 5.747197 CCAGCATCTTTGAAATACTCAATGC 59.253 40.000 0.00 0.00 43.64 3.56
2298 2862 6.770746 AGCATCTTTGAAATACTCAATGCT 57.229 33.333 7.80 7.80 46.15 3.79
2300 2864 7.447243 GCATCTTTGAAATACTCAATGCTTC 57.553 36.000 0.00 0.00 43.64 3.86
2301 2865 6.474751 GCATCTTTGAAATACTCAATGCTTCC 59.525 38.462 0.00 0.00 43.64 3.46
2302 2866 7.630082 GCATCTTTGAAATACTCAATGCTTCCT 60.630 37.037 0.00 0.00 43.64 3.36
2303 2867 7.765695 TCTTTGAAATACTCAATGCTTCCTT 57.234 32.000 0.00 0.00 43.64 3.36
2304 2868 7.820648 TCTTTGAAATACTCAATGCTTCCTTC 58.179 34.615 0.00 0.00 43.64 3.46
2305 2869 7.667219 TCTTTGAAATACTCAATGCTTCCTTCT 59.333 33.333 0.00 0.00 43.64 2.85
2306 2870 7.765695 TTGAAATACTCAATGCTTCCTTCTT 57.234 32.000 0.00 0.00 39.20 2.52
2307 2871 8.862325 TTGAAATACTCAATGCTTCCTTCTTA 57.138 30.769 0.00 0.00 39.20 2.10
2308 2872 8.862325 TGAAATACTCAATGCTTCCTTCTTAA 57.138 30.769 0.00 0.00 0.00 1.85
2309 2873 8.950210 TGAAATACTCAATGCTTCCTTCTTAAG 58.050 33.333 0.00 0.00 0.00 1.85
2321 2885 3.421844 CCTTCTTAAGGTCAACAAGGGG 58.578 50.000 1.85 0.00 43.95 4.79
2322 2886 3.073946 CCTTCTTAAGGTCAACAAGGGGA 59.926 47.826 1.85 0.00 43.95 4.81
2323 2887 4.327680 CTTCTTAAGGTCAACAAGGGGAG 58.672 47.826 1.85 0.00 0.00 4.30
2324 2888 3.593942 TCTTAAGGTCAACAAGGGGAGA 58.406 45.455 1.85 0.00 0.00 3.71
2325 2889 4.175962 TCTTAAGGTCAACAAGGGGAGAT 58.824 43.478 1.85 0.00 0.00 2.75
2326 2890 4.601857 TCTTAAGGTCAACAAGGGGAGATT 59.398 41.667 1.85 0.00 0.00 2.40
2327 2891 3.903530 AAGGTCAACAAGGGGAGATTT 57.096 42.857 0.00 0.00 0.00 2.17
2328 2892 3.903530 AGGTCAACAAGGGGAGATTTT 57.096 42.857 0.00 0.00 0.00 1.82
2329 2893 4.199002 AGGTCAACAAGGGGAGATTTTT 57.801 40.909 0.00 0.00 0.00 1.94
2330 2894 4.152647 AGGTCAACAAGGGGAGATTTTTC 58.847 43.478 0.00 0.00 0.00 2.29
2331 2895 3.895041 GGTCAACAAGGGGAGATTTTTCA 59.105 43.478 0.00 0.00 0.00 2.69
2332 2896 4.343814 GGTCAACAAGGGGAGATTTTTCAA 59.656 41.667 0.00 0.00 0.00 2.69
2333 2897 5.163353 GGTCAACAAGGGGAGATTTTTCAAA 60.163 40.000 0.00 0.00 0.00 2.69
2334 2898 6.345298 GTCAACAAGGGGAGATTTTTCAAAA 58.655 36.000 0.00 0.00 0.00 2.44
2335 2899 6.821160 GTCAACAAGGGGAGATTTTTCAAAAA 59.179 34.615 0.00 0.00 0.00 1.94
2336 2900 7.498900 GTCAACAAGGGGAGATTTTTCAAAAAT 59.501 33.333 7.87 7.87 0.00 1.82
2337 2901 8.709308 TCAACAAGGGGAGATTTTTCAAAAATA 58.291 29.630 8.12 0.00 0.00 1.40
2338 2902 9.506018 CAACAAGGGGAGATTTTTCAAAAATAT 57.494 29.630 8.12 5.22 0.00 1.28
2339 2903 9.725019 AACAAGGGGAGATTTTTCAAAAATATC 57.275 29.630 18.20 18.20 0.00 1.63
2340 2904 8.321353 ACAAGGGGAGATTTTTCAAAAATATCC 58.679 33.333 29.74 29.74 43.63 2.59
2341 2905 8.542926 CAAGGGGAGATTTTTCAAAAATATCCT 58.457 33.333 33.22 20.57 43.76 3.24
2342 2906 8.685257 AGGGGAGATTTTTCAAAAATATCCTT 57.315 30.769 33.22 24.10 43.76 3.36
2343 2907 9.116080 AGGGGAGATTTTTCAAAAATATCCTTT 57.884 29.630 33.22 23.85 43.76 3.11
2344 2908 9.383519 GGGGAGATTTTTCAAAAATATCCTTTC 57.616 33.333 33.22 22.86 43.76 2.62
2345 2909 9.383519 GGGAGATTTTTCAAAAATATCCTTTCC 57.616 33.333 33.22 20.75 43.76 3.13
2354 2918 9.462606 TTCAAAAATATCCTTTCCTAGAAGACC 57.537 33.333 0.00 0.00 0.00 3.85
2355 2919 8.611257 TCAAAAATATCCTTTCCTAGAAGACCA 58.389 33.333 0.00 0.00 0.00 4.02
2356 2920 9.243105 CAAAAATATCCTTTCCTAGAAGACCAA 57.757 33.333 0.00 0.00 0.00 3.67
2357 2921 8.809468 AAAATATCCTTTCCTAGAAGACCAAC 57.191 34.615 0.00 0.00 0.00 3.77
2358 2922 4.846168 ATCCTTTCCTAGAAGACCAACC 57.154 45.455 0.00 0.00 0.00 3.77
2359 2923 3.593942 TCCTTTCCTAGAAGACCAACCA 58.406 45.455 0.00 0.00 0.00 3.67
2360 2924 3.326880 TCCTTTCCTAGAAGACCAACCAC 59.673 47.826 0.00 0.00 0.00 4.16
2361 2925 3.072476 CCTTTCCTAGAAGACCAACCACA 59.928 47.826 0.00 0.00 0.00 4.17
2362 2926 4.445735 CCTTTCCTAGAAGACCAACCACAA 60.446 45.833 0.00 0.00 0.00 3.33
2363 2927 4.781775 TTCCTAGAAGACCAACCACAAA 57.218 40.909 0.00 0.00 0.00 2.83
2364 2928 4.781775 TCCTAGAAGACCAACCACAAAA 57.218 40.909 0.00 0.00 0.00 2.44
2365 2929 4.714632 TCCTAGAAGACCAACCACAAAAG 58.285 43.478 0.00 0.00 0.00 2.27
2366 2930 4.410883 TCCTAGAAGACCAACCACAAAAGA 59.589 41.667 0.00 0.00 0.00 2.52
2367 2931 5.104277 TCCTAGAAGACCAACCACAAAAGAA 60.104 40.000 0.00 0.00 0.00 2.52
2368 2932 4.983671 AGAAGACCAACCACAAAAGAAC 57.016 40.909 0.00 0.00 0.00 3.01
2369 2933 4.340617 AGAAGACCAACCACAAAAGAACA 58.659 39.130 0.00 0.00 0.00 3.18
2370 2934 4.770010 AGAAGACCAACCACAAAAGAACAA 59.230 37.500 0.00 0.00 0.00 2.83
2371 2935 5.422012 AGAAGACCAACCACAAAAGAACAAT 59.578 36.000 0.00 0.00 0.00 2.71
2372 2936 5.262588 AGACCAACCACAAAAGAACAATC 57.737 39.130 0.00 0.00 0.00 2.67
2373 2937 4.709397 AGACCAACCACAAAAGAACAATCA 59.291 37.500 0.00 0.00 0.00 2.57
2374 2938 5.009854 ACCAACCACAAAAGAACAATCAG 57.990 39.130 0.00 0.00 0.00 2.90
2375 2939 4.466015 ACCAACCACAAAAGAACAATCAGT 59.534 37.500 0.00 0.00 0.00 3.41
2376 2940 5.046663 ACCAACCACAAAAGAACAATCAGTT 60.047 36.000 0.00 0.00 44.93 3.16
2390 2954 6.780457 ACAATCAGTTCCTAAAATGATGGG 57.220 37.500 7.61 4.36 46.44 4.00
2391 2955 6.256053 ACAATCAGTTCCTAAAATGATGGGT 58.744 36.000 7.61 4.84 46.44 4.51
2392 2956 6.725834 ACAATCAGTTCCTAAAATGATGGGTT 59.274 34.615 7.61 0.00 46.44 4.11
2393 2957 7.235399 ACAATCAGTTCCTAAAATGATGGGTTT 59.765 33.333 7.61 0.00 46.44 3.27
2394 2958 6.588719 TCAGTTCCTAAAATGATGGGTTTG 57.411 37.500 0.00 0.00 34.75 2.93
2395 2959 6.074648 TCAGTTCCTAAAATGATGGGTTTGT 58.925 36.000 0.00 0.00 34.75 2.83
2396 2960 6.015519 TCAGTTCCTAAAATGATGGGTTTGTG 60.016 38.462 0.00 0.00 34.75 3.33
2397 2961 6.015519 CAGTTCCTAAAATGATGGGTTTGTGA 60.016 38.462 0.00 0.00 32.24 3.58
2398 2962 6.553100 AGTTCCTAAAATGATGGGTTTGTGAA 59.447 34.615 0.00 0.00 0.00 3.18
2399 2963 7.235399 AGTTCCTAAAATGATGGGTTTGTGAAT 59.765 33.333 0.00 0.00 0.00 2.57
2400 2964 7.552050 TCCTAAAATGATGGGTTTGTGAATT 57.448 32.000 0.00 0.00 0.00 2.17
2401 2965 7.385267 TCCTAAAATGATGGGTTTGTGAATTG 58.615 34.615 0.00 0.00 0.00 2.32
2402 2966 7.016072 TCCTAAAATGATGGGTTTGTGAATTGT 59.984 33.333 0.00 0.00 0.00 2.71
2403 2967 6.864360 AAAATGATGGGTTTGTGAATTGTG 57.136 33.333 0.00 0.00 0.00 3.33
2404 2968 5.804944 AATGATGGGTTTGTGAATTGTGA 57.195 34.783 0.00 0.00 0.00 3.58
2405 2969 6.363167 AATGATGGGTTTGTGAATTGTGAT 57.637 33.333 0.00 0.00 0.00 3.06
2406 2970 7.479352 AATGATGGGTTTGTGAATTGTGATA 57.521 32.000 0.00 0.00 0.00 2.15
2407 2971 6.266168 TGATGGGTTTGTGAATTGTGATAC 57.734 37.500 0.00 0.00 0.00 2.24
2408 2972 5.184864 TGATGGGTTTGTGAATTGTGATACC 59.815 40.000 0.00 0.00 0.00 2.73
2409 2973 3.504134 TGGGTTTGTGAATTGTGATACCG 59.496 43.478 0.00 0.00 0.00 4.02
2410 2974 3.754323 GGGTTTGTGAATTGTGATACCGA 59.246 43.478 0.00 0.00 0.00 4.69
2411 2975 4.398044 GGGTTTGTGAATTGTGATACCGAT 59.602 41.667 0.00 0.00 0.00 4.18
2412 2976 5.587043 GGGTTTGTGAATTGTGATACCGATA 59.413 40.000 0.00 0.00 0.00 2.92
2413 2977 6.262273 GGGTTTGTGAATTGTGATACCGATAT 59.738 38.462 0.00 0.00 0.00 1.63
2414 2978 7.442969 GGGTTTGTGAATTGTGATACCGATATA 59.557 37.037 0.00 0.00 0.00 0.86
2415 2979 8.280497 GGTTTGTGAATTGTGATACCGATATAC 58.720 37.037 0.00 0.00 0.00 1.47
2416 2980 8.822855 GTTTGTGAATTGTGATACCGATATACA 58.177 33.333 0.00 0.00 0.00 2.29
2417 2981 8.950208 TTGTGAATTGTGATACCGATATACAA 57.050 30.769 0.00 0.00 35.93 2.41
2418 2982 9.554395 TTGTGAATTGTGATACCGATATACAAT 57.446 29.630 0.00 0.00 42.03 2.71
2419 2983 9.203421 TGTGAATTGTGATACCGATATACAATC 57.797 33.333 0.00 0.00 40.07 2.67
2420 2984 8.656849 GTGAATTGTGATACCGATATACAATCC 58.343 37.037 0.00 0.00 40.07 3.01
2421 2985 7.544217 TGAATTGTGATACCGATATACAATCCG 59.456 37.037 0.00 0.00 40.07 4.18
2422 2986 5.319140 TGTGATACCGATATACAATCCGG 57.681 43.478 0.00 0.00 46.65 5.14
2423 2987 5.011586 TGTGATACCGATATACAATCCGGA 58.988 41.667 6.61 6.61 44.29 5.14
2424 2988 5.124936 TGTGATACCGATATACAATCCGGAG 59.875 44.000 11.34 0.00 44.29 4.63
2425 2989 5.356190 GTGATACCGATATACAATCCGGAGA 59.644 44.000 11.34 0.00 44.29 3.71
2426 2990 6.039493 GTGATACCGATATACAATCCGGAGAT 59.961 42.308 11.34 3.17 44.29 2.75
2427 2991 6.605995 TGATACCGATATACAATCCGGAGATT 59.394 38.462 11.34 0.00 43.74 2.40
2438 3002 2.892305 CGGAGATTGCCGCTCTAAG 58.108 57.895 0.00 0.00 45.38 2.18
2439 3003 0.103208 CGGAGATTGCCGCTCTAAGT 59.897 55.000 0.00 0.00 45.38 2.24
2440 3004 1.471676 CGGAGATTGCCGCTCTAAGTT 60.472 52.381 0.00 0.00 45.38 2.66
2441 3005 2.205911 GGAGATTGCCGCTCTAAGTTC 58.794 52.381 0.00 0.00 32.98 3.01
2442 3006 2.205911 GAGATTGCCGCTCTAAGTTCC 58.794 52.381 0.00 0.00 0.00 3.62
2443 3007 0.931005 GATTGCCGCTCTAAGTTCCG 59.069 55.000 0.00 0.00 0.00 4.30
2444 3008 1.090052 ATTGCCGCTCTAAGTTCCGC 61.090 55.000 0.00 0.00 0.00 5.54
2445 3009 2.167398 TTGCCGCTCTAAGTTCCGCT 62.167 55.000 0.00 0.00 0.00 5.52
2446 3010 1.448013 GCCGCTCTAAGTTCCGCTT 60.448 57.895 0.00 0.00 41.05 4.68
2447 3011 1.422179 GCCGCTCTAAGTTCCGCTTC 61.422 60.000 0.00 0.00 38.57 3.86
2448 3012 0.173708 CCGCTCTAAGTTCCGCTTCT 59.826 55.000 0.00 0.00 38.57 2.85
2449 3013 1.404315 CCGCTCTAAGTTCCGCTTCTT 60.404 52.381 0.00 0.00 38.57 2.52
2450 3014 1.921230 CGCTCTAAGTTCCGCTTCTTC 59.079 52.381 0.00 0.00 38.57 2.87
2451 3015 2.671351 CGCTCTAAGTTCCGCTTCTTCA 60.671 50.000 0.00 0.00 38.57 3.02
2452 3016 3.326747 GCTCTAAGTTCCGCTTCTTCAA 58.673 45.455 0.00 0.00 38.57 2.69
2453 3017 3.123790 GCTCTAAGTTCCGCTTCTTCAAC 59.876 47.826 0.00 0.00 38.57 3.18
2454 3018 3.314553 TCTAAGTTCCGCTTCTTCAACG 58.685 45.455 0.00 0.00 38.57 4.10
2455 3019 0.586802 AAGTTCCGCTTCTTCAACGC 59.413 50.000 0.00 0.00 30.06 4.84
2456 3020 0.249911 AGTTCCGCTTCTTCAACGCT 60.250 50.000 0.00 0.00 0.00 5.07
2457 3021 1.000506 AGTTCCGCTTCTTCAACGCTA 59.999 47.619 0.00 0.00 0.00 4.26
2458 3022 2.000447 GTTCCGCTTCTTCAACGCTAT 59.000 47.619 0.00 0.00 0.00 2.97
2459 3023 2.380084 TCCGCTTCTTCAACGCTATT 57.620 45.000 0.00 0.00 0.00 1.73
2460 3024 3.513680 TCCGCTTCTTCAACGCTATTA 57.486 42.857 0.00 0.00 0.00 0.98
2461 3025 3.444916 TCCGCTTCTTCAACGCTATTAG 58.555 45.455 0.00 0.00 0.00 1.73
2462 3026 2.033662 CCGCTTCTTCAACGCTATTAGC 60.034 50.000 5.56 5.56 38.02 3.09
2463 3027 2.603110 CGCTTCTTCAACGCTATTAGCA 59.397 45.455 15.64 0.00 42.58 3.49
2464 3028 3.302092 CGCTTCTTCAACGCTATTAGCAG 60.302 47.826 15.64 10.40 42.58 4.24
2465 3029 3.001736 GCTTCTTCAACGCTATTAGCAGG 59.998 47.826 15.64 3.07 42.58 4.85
2466 3030 2.550978 TCTTCAACGCTATTAGCAGGC 58.449 47.619 15.64 0.00 42.58 4.85
2467 3031 2.168521 TCTTCAACGCTATTAGCAGGCT 59.831 45.455 15.64 0.00 42.58 4.58
2468 3032 2.225068 TCAACGCTATTAGCAGGCTC 57.775 50.000 15.64 0.00 42.58 4.70
2469 3033 1.202533 TCAACGCTATTAGCAGGCTCC 60.203 52.381 15.64 0.00 42.58 4.70
2470 3034 0.830648 AACGCTATTAGCAGGCTCCA 59.169 50.000 15.64 0.00 42.58 3.86
2471 3035 0.830648 ACGCTATTAGCAGGCTCCAA 59.169 50.000 15.64 0.00 42.58 3.53
2472 3036 1.417890 ACGCTATTAGCAGGCTCCAAT 59.582 47.619 15.64 0.00 42.58 3.16
2473 3037 2.632996 ACGCTATTAGCAGGCTCCAATA 59.367 45.455 15.64 0.00 42.58 1.90
2474 3038 3.261897 ACGCTATTAGCAGGCTCCAATAT 59.738 43.478 15.64 0.00 42.58 1.28
2475 3039 4.466370 ACGCTATTAGCAGGCTCCAATATA 59.534 41.667 15.64 0.00 42.58 0.86
2476 3040 5.046591 ACGCTATTAGCAGGCTCCAATATAA 60.047 40.000 15.64 0.00 42.58 0.98
2477 3041 6.051717 CGCTATTAGCAGGCTCCAATATAAT 58.948 40.000 15.64 0.00 42.58 1.28
2478 3042 6.201806 CGCTATTAGCAGGCTCCAATATAATC 59.798 42.308 15.64 0.00 42.58 1.75
2479 3043 6.484977 GCTATTAGCAGGCTCCAATATAATCC 59.515 42.308 10.83 0.00 41.89 3.01
2480 3044 3.728385 AGCAGGCTCCAATATAATCCC 57.272 47.619 0.00 0.00 0.00 3.85
2481 3045 2.988859 AGCAGGCTCCAATATAATCCCA 59.011 45.455 0.00 0.00 0.00 4.37
2482 3046 3.398967 AGCAGGCTCCAATATAATCCCAA 59.601 43.478 0.00 0.00 0.00 4.12
2483 3047 3.760684 GCAGGCTCCAATATAATCCCAAG 59.239 47.826 0.00 0.00 0.00 3.61
2484 3048 4.507335 GCAGGCTCCAATATAATCCCAAGA 60.507 45.833 0.00 0.00 0.00 3.02
2485 3049 5.251764 CAGGCTCCAATATAATCCCAAGAG 58.748 45.833 0.00 0.00 0.00 2.85
2486 3050 4.290722 AGGCTCCAATATAATCCCAAGAGG 59.709 45.833 0.00 0.00 0.00 3.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
39 40 4.926140 AAGTTCTCCAAGCCTTCTTTTG 57.074 40.909 0.00 0.00 0.00 2.44
194 198 6.662865 TGGTACAAATGTGACAAATCCAAT 57.337 33.333 0.00 0.00 31.92 3.16
290 294 3.681593 TTTGCCATGGTTCCATTTGAG 57.318 42.857 14.67 0.00 0.00 3.02
292 296 3.474600 TGTTTTGCCATGGTTCCATTTG 58.525 40.909 14.67 0.00 0.00 2.32
317 321 6.930667 TGTGGTTAGTACTTTCCAAGTTTC 57.069 37.500 16.67 7.89 42.81 2.78
325 329 5.320549 TCGAGGATGTGGTTAGTACTTTC 57.679 43.478 0.00 0.00 0.00 2.62
329 333 6.183360 CCAAATTTCGAGGATGTGGTTAGTAC 60.183 42.308 10.47 0.00 28.90 2.73
371 375 5.691754 GGTCATTGTTTTCAAGATTGTGTCC 59.308 40.000 0.00 0.00 43.41 4.02
377 381 6.669125 TGATGGGTCATTGTTTTCAAGATT 57.331 33.333 0.00 0.00 43.41 2.40
432 438 6.584185 TTGGGTCTTTACTTAAGGCAATTC 57.416 37.500 7.53 0.00 40.35 2.17
441 467 9.416284 ACAGAAATCTTTTTGGGTCTTTACTTA 57.584 29.630 0.00 0.00 0.00 2.24
474 500 4.119556 TCCCAATACCATTGGTTTGTGA 57.880 40.909 14.78 11.59 37.09 3.58
488 514 9.486123 TTCATGGTATTGAGAAAATTCCCAATA 57.514 29.630 6.14 6.14 36.99 1.90
564 595 7.537306 CGTCAAACATTGGTATCGAATTTCTTT 59.463 33.333 0.00 0.00 0.00 2.52
572 603 3.915536 TCACGTCAAACATTGGTATCGA 58.084 40.909 0.00 0.00 0.00 3.59
634 665 4.295870 CGTCACAACAAAGCTCTAGTACA 58.704 43.478 0.00 0.00 0.00 2.90
635 666 3.121445 GCGTCACAACAAAGCTCTAGTAC 59.879 47.826 0.00 0.00 0.00 2.73
641 672 3.602390 TTAAGCGTCACAACAAAGCTC 57.398 42.857 0.00 0.00 37.15 4.09
674 712 1.361668 CGTCCTTCATTCCCAGTGCG 61.362 60.000 0.00 0.00 0.00 5.34
710 752 1.227645 AGCTTTCTGTGTGCTGCGA 60.228 52.632 0.00 0.00 35.54 5.10
760 807 0.460284 AGCAACGCTATCAGGTTCCG 60.460 55.000 0.00 0.00 36.99 4.30
787 834 3.220999 CTTCTCCGTGACCGTGGCA 62.221 63.158 0.00 0.00 0.00 4.92
798 845 1.825474 TCAGGCTTAGAACCTTCTCCG 59.175 52.381 0.00 0.00 38.70 4.63
802 849 4.221924 AGAGAGTTCAGGCTTAGAACCTTC 59.778 45.833 12.58 10.74 44.91 3.46
803 850 4.020662 CAGAGAGTTCAGGCTTAGAACCTT 60.021 45.833 12.58 3.53 44.91 3.50
804 851 3.513515 CAGAGAGTTCAGGCTTAGAACCT 59.486 47.826 12.58 9.95 44.91 3.50
807 854 3.779444 TCCAGAGAGTTCAGGCTTAGAA 58.221 45.455 0.00 0.00 30.42 2.10
808 855 3.458044 TCCAGAGAGTTCAGGCTTAGA 57.542 47.619 0.00 0.00 30.42 2.10
809 856 4.751767 ATTCCAGAGAGTTCAGGCTTAG 57.248 45.455 0.00 0.00 30.42 2.18
810 857 6.814954 ATAATTCCAGAGAGTTCAGGCTTA 57.185 37.500 0.00 0.00 30.42 3.09
811 858 5.707066 ATAATTCCAGAGAGTTCAGGCTT 57.293 39.130 0.00 0.00 30.42 4.35
812 859 5.707066 AATAATTCCAGAGAGTTCAGGCT 57.293 39.130 0.00 0.00 30.42 4.58
813 860 5.882557 TCAAATAATTCCAGAGAGTTCAGGC 59.117 40.000 0.00 0.00 30.42 4.85
814 861 6.881065 TGTCAAATAATTCCAGAGAGTTCAGG 59.119 38.462 0.00 0.00 0.00 3.86
815 862 7.912056 TGTCAAATAATTCCAGAGAGTTCAG 57.088 36.000 0.00 0.00 0.00 3.02
816 863 8.868522 AATGTCAAATAATTCCAGAGAGTTCA 57.131 30.769 0.00 0.00 0.00 3.18
817 864 9.171877 AGAATGTCAAATAATTCCAGAGAGTTC 57.828 33.333 0.00 0.00 34.02 3.01
818 865 8.954350 CAGAATGTCAAATAATTCCAGAGAGTT 58.046 33.333 0.00 0.00 34.02 3.01
819 866 7.066766 GCAGAATGTCAAATAATTCCAGAGAGT 59.933 37.037 0.00 0.00 39.31 3.24
820 867 7.416022 GCAGAATGTCAAATAATTCCAGAGAG 58.584 38.462 0.00 0.00 39.31 3.20
821 868 6.319658 GGCAGAATGTCAAATAATTCCAGAGA 59.680 38.462 0.00 0.00 43.01 3.10
822 869 6.501781 GGCAGAATGTCAAATAATTCCAGAG 58.498 40.000 0.00 0.00 43.01 3.35
823 870 6.455360 GGCAGAATGTCAAATAATTCCAGA 57.545 37.500 0.00 0.00 43.01 3.86
836 883 3.065575 CCTGTACGGGCAGAATGTC 57.934 57.895 8.07 0.00 42.54 3.06
854 901 2.483188 GCTATATATGCTGGTACGGGCC 60.483 54.545 0.00 0.00 33.56 5.80
856 903 4.099419 TGATGCTATATATGCTGGTACGGG 59.901 45.833 0.00 0.00 33.56 5.28
866 913 5.220719 CGCATGGGTGTTGATGCTATATATG 60.221 44.000 0.68 0.00 42.40 1.78
877 924 2.983030 GTGGCGCATGGGTGTTGA 60.983 61.111 10.83 0.00 0.00 3.18
887 934 3.565961 ATGGACATGGTGTGGCGCA 62.566 57.895 10.83 0.00 36.36 6.09
891 938 0.813184 GCTTGATGGACATGGTGTGG 59.187 55.000 0.00 0.00 0.00 4.17
909 956 3.527533 TCACAACCTTATATCACGTGGC 58.472 45.455 17.00 0.00 0.00 5.01
911 958 4.180817 TGCTCACAACCTTATATCACGTG 58.819 43.478 9.94 9.94 0.00 4.49
912 959 4.081642 ACTGCTCACAACCTTATATCACGT 60.082 41.667 0.00 0.00 0.00 4.49
914 961 5.874810 TGAACTGCTCACAACCTTATATCAC 59.125 40.000 0.00 0.00 0.00 3.06
915 962 6.048732 TGAACTGCTCACAACCTTATATCA 57.951 37.500 0.00 0.00 0.00 2.15
959 1019 0.887836 TGCTTGCTGGCTTCTCTGTG 60.888 55.000 3.49 0.00 0.00 3.66
980 1042 3.057969 TCCGTGAATGCTCAATCTTGT 57.942 42.857 0.00 0.00 31.88 3.16
1278 1349 3.771160 ATCGCGAACGCCTCCCTT 61.771 61.111 15.24 0.00 39.84 3.95
1378 1449 2.203126 CAGCCCCATCTTCTCGGC 60.203 66.667 0.00 0.00 41.96 5.54
1496 1567 3.896122 ACGAATGAAATGAAACCAACCG 58.104 40.909 0.00 0.00 0.00 4.44
1499 1570 3.978217 GCGAACGAATGAAATGAAACCAA 59.022 39.130 0.00 0.00 0.00 3.67
1526 1597 5.184864 ACCACATGTCAAAAACACAGAAGAA 59.815 36.000 0.00 0.00 41.75 2.52
1535 1606 3.520569 AGTGCAACCACATGTCAAAAAC 58.479 40.909 0.00 0.00 44.53 2.43
1555 1626 4.037803 TGAAACATCCACCATGTGAACAAG 59.962 41.667 0.00 0.00 45.77 3.16
1567 1638 5.104374 CCAGCATACAATTGAAACATCCAC 58.896 41.667 13.59 0.00 0.00 4.02
1572 1643 2.830923 CCCCCAGCATACAATTGAAACA 59.169 45.455 13.59 0.00 0.00 2.83
1587 1658 0.899717 CATCACACCCAAACCCCCAG 60.900 60.000 0.00 0.00 0.00 4.45
1590 1661 0.831711 AAGCATCACACCCAAACCCC 60.832 55.000 0.00 0.00 0.00 4.95
1591 1662 1.917872 TAAGCATCACACCCAAACCC 58.082 50.000 0.00 0.00 0.00 4.11
1594 1665 5.105146 ACAAAAGTTAAGCATCACACCCAAA 60.105 36.000 0.00 0.00 0.00 3.28
1640 1711 7.122353 CCCTCAACTTCTCTTCATCATCAAAAT 59.878 37.037 0.00 0.00 0.00 1.82
1709 1785 8.486383 CGAACAAGATTCTTATCAATGAGCTAG 58.514 37.037 0.00 0.00 32.95 3.42
1713 1789 8.189709 TCACGAACAAGATTCTTATCAATGAG 57.810 34.615 0.00 0.00 32.95 2.90
1724 1800 8.227791 TGCTTAAACTAATCACGAACAAGATTC 58.772 33.333 0.00 0.00 36.07 2.52
1730 1806 7.081349 CCATTTGCTTAAACTAATCACGAACA 58.919 34.615 0.00 0.00 0.00 3.18
1735 1811 9.135843 GGTTTACCATTTGCTTAAACTAATCAC 57.864 33.333 0.00 0.00 36.41 3.06
1742 1818 6.156519 CAGAGGGTTTACCATTTGCTTAAAC 58.843 40.000 0.69 0.00 43.89 2.01
1779 1857 9.109393 GCGCCAATATCCTTTATTATCTATTCA 57.891 33.333 0.00 0.00 0.00 2.57
1783 1861 6.046593 CGGCGCCAATATCCTTTATTATCTA 58.953 40.000 28.98 0.00 0.00 1.98
1785 1863 4.495844 GCGGCGCCAATATCCTTTATTATC 60.496 45.833 28.98 0.00 0.00 1.75
1805 1883 1.033746 ATGAGAAGGCCAACATGCGG 61.034 55.000 5.01 0.00 0.00 5.69
1806 1884 0.099968 CATGAGAAGGCCAACATGCG 59.900 55.000 5.01 0.00 34.76 4.73
1807 1885 0.458669 CCATGAGAAGGCCAACATGC 59.541 55.000 18.98 1.01 38.79 4.06
1808 1886 1.108776 CCCATGAGAAGGCCAACATG 58.891 55.000 5.01 14.09 39.51 3.21
1809 1887 0.032813 CCCCATGAGAAGGCCAACAT 60.033 55.000 5.01 1.54 0.00 2.71
1810 1888 1.383799 CCCCATGAGAAGGCCAACA 59.616 57.895 5.01 0.00 0.00 3.33
1811 1889 2.054453 GCCCCATGAGAAGGCCAAC 61.054 63.158 5.01 0.00 41.00 3.77
1819 1897 1.003580 GAAGTGAGTTGCCCCATGAGA 59.996 52.381 0.00 0.00 0.00 3.27
1830 1908 4.745172 GCAAAGGAGAGAAGGAAGTGAGTT 60.745 45.833 0.00 0.00 0.00 3.01
1831 1909 3.244387 GCAAAGGAGAGAAGGAAGTGAGT 60.244 47.826 0.00 0.00 0.00 3.41
1846 1924 2.954989 TGTTAGTGTTGCATGCAAAGGA 59.045 40.909 33.42 17.97 37.70 3.36
1862 1940 4.034858 GGTGATGTCATGCTCATGTGTTAG 59.965 45.833 9.41 0.00 39.72 2.34
1911 1989 3.552890 GCCAGCGGTTTGAGATTCTTTTT 60.553 43.478 0.00 0.00 0.00 1.94
1916 1994 0.678048 AGGCCAGCGGTTTGAGATTC 60.678 55.000 5.01 0.00 0.00 2.52
1917 1995 0.962356 CAGGCCAGCGGTTTGAGATT 60.962 55.000 5.01 0.00 0.00 2.40
1918 1996 1.377725 CAGGCCAGCGGTTTGAGAT 60.378 57.895 5.01 0.00 0.00 2.75
1929 2012 2.722201 GGACCGTCTACCAGGCCAG 61.722 68.421 5.01 0.00 0.00 4.85
1931 2014 3.834799 CGGACCGTCTACCAGGCC 61.835 72.222 5.48 0.00 0.00 5.19
1932 2015 1.673808 AATCGGACCGTCTACCAGGC 61.674 60.000 14.79 0.00 0.00 4.85
1939 2022 1.203994 ACGAATGAAATCGGACCGTCT 59.796 47.619 14.79 0.00 46.82 4.18
1949 2032 2.009774 CTCCGCCTTGACGAATGAAAT 58.990 47.619 0.00 0.00 34.06 2.17
1956 2039 2.654877 GGTTCTCCGCCTTGACGA 59.345 61.111 0.00 0.00 34.06 4.20
1957 2040 2.434359 GGGTTCTCCGCCTTGACG 60.434 66.667 0.00 0.00 33.83 4.35
1958 2041 1.671379 GTGGGTTCTCCGCCTTGAC 60.671 63.158 0.00 0.00 40.09 3.18
1979 2543 3.871594 CCGATTAGCGACCTTTCTTTCAT 59.128 43.478 0.00 0.00 44.57 2.57
2026 2590 7.940178 AGTTGCTAAACGGGAATTTTAAAAG 57.060 32.000 6.79 0.00 41.45 2.27
2036 2600 5.995282 CCATCATATTAGTTGCTAAACGGGA 59.005 40.000 0.00 0.00 41.45 5.14
2040 2604 8.208718 TGACACCATCATATTAGTTGCTAAAC 57.791 34.615 0.00 0.00 32.10 2.01
2060 2624 5.808042 AATCTTACACATCATGCTGACAC 57.192 39.130 3.02 0.00 0.00 3.67
2127 2691 8.724229 GCAGATGCTGTAATGAATGATTGTATA 58.276 33.333 0.00 0.00 38.21 1.47
2128 2692 7.309012 GGCAGATGCTGTAATGAATGATTGTAT 60.309 37.037 4.59 0.00 41.70 2.29
2129 2693 6.016860 GGCAGATGCTGTAATGAATGATTGTA 60.017 38.462 4.59 0.00 41.70 2.41
2130 2694 5.221185 GGCAGATGCTGTAATGAATGATTGT 60.221 40.000 4.59 0.00 41.70 2.71
2131 2695 5.220381 GGCAGATGCTGTAATGAATGATTG 58.780 41.667 4.59 0.00 41.70 2.67
2132 2696 4.891168 TGGCAGATGCTGTAATGAATGATT 59.109 37.500 4.59 0.00 41.70 2.57
2133 2697 4.277672 GTGGCAGATGCTGTAATGAATGAT 59.722 41.667 4.59 0.00 41.70 2.45
2134 2698 3.628942 GTGGCAGATGCTGTAATGAATGA 59.371 43.478 4.59 0.00 41.70 2.57
2135 2699 3.379057 TGTGGCAGATGCTGTAATGAATG 59.621 43.478 4.59 0.00 41.70 2.67
2136 2700 3.379372 GTGTGGCAGATGCTGTAATGAAT 59.621 43.478 4.59 0.00 41.70 2.57
2137 2701 2.749076 GTGTGGCAGATGCTGTAATGAA 59.251 45.455 4.59 0.00 41.70 2.57
2138 2702 2.290197 TGTGTGGCAGATGCTGTAATGA 60.290 45.455 4.59 0.00 41.70 2.57
2139 2703 2.086094 TGTGTGGCAGATGCTGTAATG 58.914 47.619 4.59 0.00 41.70 1.90
2140 2704 2.495155 TGTGTGGCAGATGCTGTAAT 57.505 45.000 4.59 0.00 41.70 1.89
2153 2717 2.551912 GGTGTTTCGGCCTGTGTGG 61.552 63.158 0.00 0.00 39.35 4.17
2154 2718 1.172180 ATGGTGTTTCGGCCTGTGTG 61.172 55.000 0.00 0.00 0.00 3.82
2155 2719 0.467290 AATGGTGTTTCGGCCTGTGT 60.467 50.000 0.00 0.00 0.00 3.72
2156 2720 1.529226 TAATGGTGTTTCGGCCTGTG 58.471 50.000 0.00 0.00 0.00 3.66
2157 2721 2.279935 TTAATGGTGTTTCGGCCTGT 57.720 45.000 0.00 0.00 0.00 4.00
2158 2722 4.974368 TTATTAATGGTGTTTCGGCCTG 57.026 40.909 0.00 0.00 0.00 4.85
2159 2723 5.986501 TTTTATTAATGGTGTTTCGGCCT 57.013 34.783 0.00 0.00 0.00 5.19
2160 2724 5.927115 TGTTTTTATTAATGGTGTTTCGGCC 59.073 36.000 0.00 0.00 0.00 6.13
2161 2725 6.643360 AGTGTTTTTATTAATGGTGTTTCGGC 59.357 34.615 0.00 0.00 0.00 5.54
2162 2726 7.650104 ACAGTGTTTTTATTAATGGTGTTTCGG 59.350 33.333 0.00 0.00 0.00 4.30
2163 2727 8.568732 ACAGTGTTTTTATTAATGGTGTTTCG 57.431 30.769 0.00 0.00 0.00 3.46
2164 2728 9.522804 TGACAGTGTTTTTATTAATGGTGTTTC 57.477 29.630 0.00 0.00 0.00 2.78
2165 2729 9.528018 CTGACAGTGTTTTTATTAATGGTGTTT 57.472 29.630 0.00 0.00 0.00 2.83
2166 2730 8.141268 CCTGACAGTGTTTTTATTAATGGTGTT 58.859 33.333 0.00 0.00 0.00 3.32
2167 2731 7.657336 CCTGACAGTGTTTTTATTAATGGTGT 58.343 34.615 0.00 0.00 0.00 4.16
2168 2732 6.586082 GCCTGACAGTGTTTTTATTAATGGTG 59.414 38.462 0.00 0.00 0.00 4.17
2169 2733 6.295067 GGCCTGACAGTGTTTTTATTAATGGT 60.295 38.462 0.00 0.00 0.00 3.55
2170 2734 6.071391 AGGCCTGACAGTGTTTTTATTAATGG 60.071 38.462 3.11 0.00 0.00 3.16
2171 2735 6.924111 AGGCCTGACAGTGTTTTTATTAATG 58.076 36.000 3.11 0.00 0.00 1.90
2172 2736 8.823220 ATAGGCCTGACAGTGTTTTTATTAAT 57.177 30.769 17.99 0.00 0.00 1.40
2173 2737 8.644374 AATAGGCCTGACAGTGTTTTTATTAA 57.356 30.769 17.99 0.00 0.00 1.40
2174 2738 9.914834 ATAATAGGCCTGACAGTGTTTTTATTA 57.085 29.630 17.99 6.87 0.00 0.98
2175 2739 8.823220 ATAATAGGCCTGACAGTGTTTTTATT 57.177 30.769 17.99 4.57 0.00 1.40
2176 2740 8.823220 AATAATAGGCCTGACAGTGTTTTTAT 57.177 30.769 17.99 0.00 0.00 1.40
2177 2741 9.742144 TTAATAATAGGCCTGACAGTGTTTTTA 57.258 29.630 17.99 0.00 0.00 1.52
2178 2742 8.644374 TTAATAATAGGCCTGACAGTGTTTTT 57.356 30.769 17.99 0.00 0.00 1.94
2179 2743 8.644374 TTTAATAATAGGCCTGACAGTGTTTT 57.356 30.769 17.99 0.00 0.00 2.43
2180 2744 8.520351 GTTTTAATAATAGGCCTGACAGTGTTT 58.480 33.333 17.99 0.83 0.00 2.83
2181 2745 7.888546 AGTTTTAATAATAGGCCTGACAGTGTT 59.111 33.333 17.99 1.70 0.00 3.32
2182 2746 7.402862 AGTTTTAATAATAGGCCTGACAGTGT 58.597 34.615 17.99 0.00 0.00 3.55
2183 2747 7.865706 AGTTTTAATAATAGGCCTGACAGTG 57.134 36.000 17.99 0.00 0.00 3.66
2184 2748 9.969001 TTTAGTTTTAATAATAGGCCTGACAGT 57.031 29.630 17.99 0.00 0.00 3.55
2186 2750 9.969001 AGTTTAGTTTTAATAATAGGCCTGACA 57.031 29.630 17.99 0.00 0.00 3.58
2202 2766 9.726438 ACACATGAGATAGCTAAGTTTAGTTTT 57.274 29.630 0.00 0.00 33.32 2.43
2203 2767 9.372369 GACACATGAGATAGCTAAGTTTAGTTT 57.628 33.333 0.00 0.00 33.32 2.66
2204 2768 8.531982 TGACACATGAGATAGCTAAGTTTAGTT 58.468 33.333 0.00 0.00 33.32 2.24
2205 2769 7.976734 GTGACACATGAGATAGCTAAGTTTAGT 59.023 37.037 0.00 0.00 33.32 2.24
2206 2770 7.436673 GGTGACACATGAGATAGCTAAGTTTAG 59.563 40.741 8.08 0.00 0.00 1.85
2207 2771 7.093509 TGGTGACACATGAGATAGCTAAGTTTA 60.094 37.037 8.08 0.00 33.40 2.01
2208 2772 6.109359 GGTGACACATGAGATAGCTAAGTTT 58.891 40.000 8.08 0.00 0.00 2.66
2209 2773 5.187772 TGGTGACACATGAGATAGCTAAGTT 59.812 40.000 8.08 0.00 33.40 2.66
2210 2774 4.711846 TGGTGACACATGAGATAGCTAAGT 59.288 41.667 8.08 0.00 33.40 2.24
2211 2775 5.268118 TGGTGACACATGAGATAGCTAAG 57.732 43.478 8.08 0.00 33.40 2.18
2225 2789 7.662526 AGCAGGGAAGCTAATATGGTGACAC 62.663 48.000 0.00 0.00 44.01 3.67
2226 2790 5.674322 AGCAGGGAAGCTAATATGGTGACA 61.674 45.833 0.00 0.00 44.50 3.58
2227 2791 3.142174 GCAGGGAAGCTAATATGGTGAC 58.858 50.000 0.00 0.00 0.00 3.67
2228 2792 3.048600 AGCAGGGAAGCTAATATGGTGA 58.951 45.455 0.00 0.00 44.50 4.02
2229 2793 3.498774 AGCAGGGAAGCTAATATGGTG 57.501 47.619 0.00 0.00 44.50 4.17
2237 2801 5.904984 TTCCAATATTAGCAGGGAAGCTA 57.095 39.130 1.11 0.00 44.50 3.32
2239 2803 5.772169 AGATTTCCAATATTAGCAGGGAAGC 59.228 40.000 4.83 0.00 38.72 3.86
2240 2804 7.830099 AAGATTTCCAATATTAGCAGGGAAG 57.170 36.000 4.83 0.00 38.72 3.46
2241 2805 9.131791 GTAAAGATTTCCAATATTAGCAGGGAA 57.868 33.333 1.11 1.11 35.93 3.97
2242 2806 8.278639 TGTAAAGATTTCCAATATTAGCAGGGA 58.721 33.333 0.00 0.00 0.00 4.20
2243 2807 8.463930 TGTAAAGATTTCCAATATTAGCAGGG 57.536 34.615 0.00 0.00 0.00 4.45
2247 2811 9.118236 GCGAATGTAAAGATTTCCAATATTAGC 57.882 33.333 0.00 0.00 0.00 3.09
2248 2812 9.612620 GGCGAATGTAAAGATTTCCAATATTAG 57.387 33.333 0.00 0.00 0.00 1.73
2249 2813 9.126151 TGGCGAATGTAAAGATTTCCAATATTA 57.874 29.630 0.00 0.00 0.00 0.98
2250 2814 8.006298 TGGCGAATGTAAAGATTTCCAATATT 57.994 30.769 0.00 0.00 0.00 1.28
2251 2815 7.581213 TGGCGAATGTAAAGATTTCCAATAT 57.419 32.000 0.00 0.00 0.00 1.28
2252 2816 6.459573 GCTGGCGAATGTAAAGATTTCCAATA 60.460 38.462 0.00 0.00 0.00 1.90
2253 2817 5.679638 GCTGGCGAATGTAAAGATTTCCAAT 60.680 40.000 0.00 0.00 0.00 3.16
2254 2818 4.380444 GCTGGCGAATGTAAAGATTTCCAA 60.380 41.667 0.00 0.00 0.00 3.53
2255 2819 3.128589 GCTGGCGAATGTAAAGATTTCCA 59.871 43.478 0.00 0.00 0.00 3.53
2256 2820 3.128589 TGCTGGCGAATGTAAAGATTTCC 59.871 43.478 0.00 0.00 0.00 3.13
2257 2821 4.355543 TGCTGGCGAATGTAAAGATTTC 57.644 40.909 0.00 0.00 0.00 2.17
2258 2822 4.641989 AGATGCTGGCGAATGTAAAGATTT 59.358 37.500 0.00 0.00 0.00 2.17
2259 2823 4.202441 AGATGCTGGCGAATGTAAAGATT 58.798 39.130 0.00 0.00 0.00 2.40
2260 2824 3.813443 AGATGCTGGCGAATGTAAAGAT 58.187 40.909 0.00 0.00 0.00 2.40
2261 2825 3.266510 AGATGCTGGCGAATGTAAAGA 57.733 42.857 0.00 0.00 0.00 2.52
2262 2826 4.100529 CAAAGATGCTGGCGAATGTAAAG 58.899 43.478 0.00 0.00 0.00 1.85
2263 2827 3.755905 TCAAAGATGCTGGCGAATGTAAA 59.244 39.130 0.00 0.00 0.00 2.01
2264 2828 3.342719 TCAAAGATGCTGGCGAATGTAA 58.657 40.909 0.00 0.00 0.00 2.41
2265 2829 2.984562 TCAAAGATGCTGGCGAATGTA 58.015 42.857 0.00 0.00 0.00 2.29
2266 2830 1.825090 TCAAAGATGCTGGCGAATGT 58.175 45.000 0.00 0.00 0.00 2.71
2267 2831 2.925578 TTCAAAGATGCTGGCGAATG 57.074 45.000 0.00 0.00 0.00 2.67
2268 2832 4.641989 AGTATTTCAAAGATGCTGGCGAAT 59.358 37.500 0.00 0.00 0.00 3.34
2269 2833 4.009675 AGTATTTCAAAGATGCTGGCGAA 58.990 39.130 0.00 0.00 0.00 4.70
2270 2834 3.609853 AGTATTTCAAAGATGCTGGCGA 58.390 40.909 0.00 0.00 0.00 5.54
2271 2835 3.374988 TGAGTATTTCAAAGATGCTGGCG 59.625 43.478 0.00 0.00 31.34 5.69
2272 2836 4.970662 TGAGTATTTCAAAGATGCTGGC 57.029 40.909 0.00 0.00 31.34 4.85
2275 2839 6.770746 AGCATTGAGTATTTCAAAGATGCT 57.229 33.333 9.47 9.47 46.83 3.79
2283 2847 8.862325 TTAAGAAGGAAGCATTGAGTATTTCA 57.138 30.769 0.00 0.00 0.00 2.69
2301 2865 4.041691 TCTCCCCTTGTTGACCTTAAGAAG 59.958 45.833 3.36 0.00 32.47 2.85
2302 2866 3.977999 TCTCCCCTTGTTGACCTTAAGAA 59.022 43.478 3.36 0.00 0.00 2.52
2303 2867 3.593942 TCTCCCCTTGTTGACCTTAAGA 58.406 45.455 3.36 0.00 0.00 2.10
2304 2868 4.576330 ATCTCCCCTTGTTGACCTTAAG 57.424 45.455 0.00 0.00 0.00 1.85
2305 2869 5.333566 AAATCTCCCCTTGTTGACCTTAA 57.666 39.130 0.00 0.00 0.00 1.85
2306 2870 5.333566 AAAATCTCCCCTTGTTGACCTTA 57.666 39.130 0.00 0.00 0.00 2.69
2307 2871 3.903530 AAATCTCCCCTTGTTGACCTT 57.096 42.857 0.00 0.00 0.00 3.50
2308 2872 3.903530 AAAATCTCCCCTTGTTGACCT 57.096 42.857 0.00 0.00 0.00 3.85
2309 2873 3.895041 TGAAAAATCTCCCCTTGTTGACC 59.105 43.478 0.00 0.00 0.00 4.02
2310 2874 5.529581 TTGAAAAATCTCCCCTTGTTGAC 57.470 39.130 0.00 0.00 0.00 3.18
2311 2875 6.552445 TTTTGAAAAATCTCCCCTTGTTGA 57.448 33.333 0.00 0.00 0.00 3.18
2312 2876 7.806409 ATTTTTGAAAAATCTCCCCTTGTTG 57.194 32.000 9.92 0.00 0.00 3.33
2313 2877 9.725019 GATATTTTTGAAAAATCTCCCCTTGTT 57.275 29.630 18.14 0.00 0.00 2.83
2314 2878 8.321353 GGATATTTTTGAAAAATCTCCCCTTGT 58.679 33.333 25.48 4.47 0.00 3.16
2315 2879 8.542926 AGGATATTTTTGAAAAATCTCCCCTTG 58.457 33.333 29.10 0.00 30.42 3.61
2316 2880 8.685257 AGGATATTTTTGAAAAATCTCCCCTT 57.315 30.769 29.10 17.09 30.42 3.95
2317 2881 8.685257 AAGGATATTTTTGAAAAATCTCCCCT 57.315 30.769 29.10 21.65 30.42 4.79
2318 2882 9.383519 GAAAGGATATTTTTGAAAAATCTCCCC 57.616 33.333 29.10 20.30 30.42 4.81
2319 2883 9.383519 GGAAAGGATATTTTTGAAAAATCTCCC 57.616 33.333 29.10 22.08 30.42 4.30
2328 2892 9.462606 GGTCTTCTAGGAAAGGATATTTTTGAA 57.537 33.333 0.00 0.00 0.00 2.69
2329 2893 8.611257 TGGTCTTCTAGGAAAGGATATTTTTGA 58.389 33.333 0.00 0.00 0.00 2.69
2330 2894 8.807948 TGGTCTTCTAGGAAAGGATATTTTTG 57.192 34.615 0.00 0.00 0.00 2.44
2331 2895 9.244292 GTTGGTCTTCTAGGAAAGGATATTTTT 57.756 33.333 0.00 0.00 0.00 1.94
2332 2896 7.834681 GGTTGGTCTTCTAGGAAAGGATATTTT 59.165 37.037 0.00 0.00 0.00 1.82
2333 2897 7.036863 TGGTTGGTCTTCTAGGAAAGGATATTT 60.037 37.037 0.00 0.00 0.00 1.40
2334 2898 6.447084 TGGTTGGTCTTCTAGGAAAGGATATT 59.553 38.462 0.00 0.00 0.00 1.28
2335 2899 5.970640 TGGTTGGTCTTCTAGGAAAGGATAT 59.029 40.000 0.00 0.00 0.00 1.63
2336 2900 5.189145 GTGGTTGGTCTTCTAGGAAAGGATA 59.811 44.000 0.00 0.00 0.00 2.59
2337 2901 4.019231 GTGGTTGGTCTTCTAGGAAAGGAT 60.019 45.833 0.00 0.00 0.00 3.24
2338 2902 3.326880 GTGGTTGGTCTTCTAGGAAAGGA 59.673 47.826 0.00 0.00 0.00 3.36
2339 2903 3.072476 TGTGGTTGGTCTTCTAGGAAAGG 59.928 47.826 0.00 0.00 0.00 3.11
2340 2904 4.351874 TGTGGTTGGTCTTCTAGGAAAG 57.648 45.455 0.00 0.00 0.00 2.62
2341 2905 4.781775 TTGTGGTTGGTCTTCTAGGAAA 57.218 40.909 0.00 0.00 0.00 3.13
2342 2906 4.781775 TTTGTGGTTGGTCTTCTAGGAA 57.218 40.909 0.00 0.00 0.00 3.36
2343 2907 4.410883 TCTTTTGTGGTTGGTCTTCTAGGA 59.589 41.667 0.00 0.00 0.00 2.94
2344 2908 4.714632 TCTTTTGTGGTTGGTCTTCTAGG 58.285 43.478 0.00 0.00 0.00 3.02
2345 2909 5.588648 TGTTCTTTTGTGGTTGGTCTTCTAG 59.411 40.000 0.00 0.00 0.00 2.43
2346 2910 5.502079 TGTTCTTTTGTGGTTGGTCTTCTA 58.498 37.500 0.00 0.00 0.00 2.10
2347 2911 4.340617 TGTTCTTTTGTGGTTGGTCTTCT 58.659 39.130 0.00 0.00 0.00 2.85
2348 2912 4.712122 TGTTCTTTTGTGGTTGGTCTTC 57.288 40.909 0.00 0.00 0.00 2.87
2349 2913 5.186797 TGATTGTTCTTTTGTGGTTGGTCTT 59.813 36.000 0.00 0.00 0.00 3.01
2350 2914 4.709397 TGATTGTTCTTTTGTGGTTGGTCT 59.291 37.500 0.00 0.00 0.00 3.85
2351 2915 5.004922 TGATTGTTCTTTTGTGGTTGGTC 57.995 39.130 0.00 0.00 0.00 4.02
2352 2916 4.466015 ACTGATTGTTCTTTTGTGGTTGGT 59.534 37.500 0.00 0.00 0.00 3.67
2353 2917 5.009854 ACTGATTGTTCTTTTGTGGTTGG 57.990 39.130 0.00 0.00 0.00 3.77
2366 2930 6.725834 ACCCATCATTTTAGGAACTGATTGTT 59.274 34.615 0.00 0.00 41.52 2.83
2367 2931 6.256053 ACCCATCATTTTAGGAACTGATTGT 58.744 36.000 0.00 0.00 41.52 2.71
2368 2932 6.780457 ACCCATCATTTTAGGAACTGATTG 57.220 37.500 0.00 0.00 41.52 2.67
2369 2933 7.235399 ACAAACCCATCATTTTAGGAACTGATT 59.765 33.333 0.00 0.00 41.52 2.57
2370 2934 6.725834 ACAAACCCATCATTTTAGGAACTGAT 59.274 34.615 0.00 0.00 41.52 2.90
2371 2935 6.015519 CACAAACCCATCATTTTAGGAACTGA 60.016 38.462 0.00 0.00 41.52 3.41
2372 2936 6.015519 TCACAAACCCATCATTTTAGGAACTG 60.016 38.462 0.00 0.00 41.52 3.16
2373 2937 6.074648 TCACAAACCCATCATTTTAGGAACT 58.925 36.000 0.00 0.00 46.37 3.01
2374 2938 6.339587 TCACAAACCCATCATTTTAGGAAC 57.660 37.500 0.00 0.00 0.00 3.62
2375 2939 6.985653 TTCACAAACCCATCATTTTAGGAA 57.014 33.333 0.00 0.00 0.00 3.36
2376 2940 7.016072 ACAATTCACAAACCCATCATTTTAGGA 59.984 33.333 0.00 0.00 0.00 2.94
2377 2941 7.118101 CACAATTCACAAACCCATCATTTTAGG 59.882 37.037 0.00 0.00 0.00 2.69
2378 2942 7.871973 TCACAATTCACAAACCCATCATTTTAG 59.128 33.333 0.00 0.00 0.00 1.85
2379 2943 7.730084 TCACAATTCACAAACCCATCATTTTA 58.270 30.769 0.00 0.00 0.00 1.52
2380 2944 6.590068 TCACAATTCACAAACCCATCATTTT 58.410 32.000 0.00 0.00 0.00 1.82
2381 2945 6.172136 TCACAATTCACAAACCCATCATTT 57.828 33.333 0.00 0.00 0.00 2.32
2382 2946 5.804944 TCACAATTCACAAACCCATCATT 57.195 34.783 0.00 0.00 0.00 2.57
2383 2947 6.127366 GGTATCACAATTCACAAACCCATCAT 60.127 38.462 0.00 0.00 0.00 2.45
2384 2948 5.184864 GGTATCACAATTCACAAACCCATCA 59.815 40.000 0.00 0.00 0.00 3.07
2385 2949 5.650543 GGTATCACAATTCACAAACCCATC 58.349 41.667 0.00 0.00 0.00 3.51
2386 2950 4.157656 CGGTATCACAATTCACAAACCCAT 59.842 41.667 0.00 0.00 0.00 4.00
2387 2951 3.504134 CGGTATCACAATTCACAAACCCA 59.496 43.478 0.00 0.00 0.00 4.51
2388 2952 3.754323 TCGGTATCACAATTCACAAACCC 59.246 43.478 0.00 0.00 0.00 4.11
2389 2953 5.560966 ATCGGTATCACAATTCACAAACC 57.439 39.130 0.00 0.00 0.00 3.27
2390 2954 8.822855 TGTATATCGGTATCACAATTCACAAAC 58.177 33.333 0.00 0.00 0.00 2.93
2391 2955 8.950208 TGTATATCGGTATCACAATTCACAAA 57.050 30.769 0.00 0.00 0.00 2.83
2392 2956 8.950208 TTGTATATCGGTATCACAATTCACAA 57.050 30.769 0.00 0.00 0.00 3.33
2393 2957 9.203421 GATTGTATATCGGTATCACAATTCACA 57.797 33.333 17.20 3.41 39.31 3.58
2394 2958 8.656849 GGATTGTATATCGGTATCACAATTCAC 58.343 37.037 17.20 11.23 39.31 3.18
2395 2959 7.544217 CGGATTGTATATCGGTATCACAATTCA 59.456 37.037 18.90 2.51 39.31 2.57
2396 2960 7.010183 CCGGATTGTATATCGGTATCACAATTC 59.990 40.741 17.20 15.45 39.31 2.17
2397 2961 6.816640 CCGGATTGTATATCGGTATCACAATT 59.183 38.462 17.20 7.87 39.31 2.32
2398 2962 6.153851 TCCGGATTGTATATCGGTATCACAAT 59.846 38.462 16.60 16.60 41.28 2.71
2399 2963 5.477637 TCCGGATTGTATATCGGTATCACAA 59.522 40.000 0.00 10.89 42.71 3.33
2400 2964 5.011586 TCCGGATTGTATATCGGTATCACA 58.988 41.667 0.00 0.00 42.71 3.58
2401 2965 5.356190 TCTCCGGATTGTATATCGGTATCAC 59.644 44.000 3.57 0.00 42.71 3.06
2402 2966 5.503002 TCTCCGGATTGTATATCGGTATCA 58.497 41.667 3.57 0.00 42.71 2.15
2403 2967 6.636562 ATCTCCGGATTGTATATCGGTATC 57.363 41.667 3.57 0.00 42.71 2.24
2421 2985 2.205911 GAACTTAGAGCGGCAATCTCC 58.794 52.381 1.45 0.00 0.00 3.71
2422 2986 2.205911 GGAACTTAGAGCGGCAATCTC 58.794 52.381 1.45 0.00 0.00 2.75
2423 2987 1.471676 CGGAACTTAGAGCGGCAATCT 60.472 52.381 1.45 0.00 0.00 2.40
2424 2988 0.931005 CGGAACTTAGAGCGGCAATC 59.069 55.000 1.45 0.00 0.00 2.67
2425 2989 1.090052 GCGGAACTTAGAGCGGCAAT 61.090 55.000 1.45 0.00 0.00 3.56
2426 2990 1.740296 GCGGAACTTAGAGCGGCAA 60.740 57.895 1.45 0.00 0.00 4.52
2427 2991 2.125673 GCGGAACTTAGAGCGGCA 60.126 61.111 1.45 0.00 0.00 5.69
2428 2992 1.422179 GAAGCGGAACTTAGAGCGGC 61.422 60.000 0.00 0.00 39.29 6.53
2429 2993 0.173708 AGAAGCGGAACTTAGAGCGG 59.826 55.000 0.00 0.00 39.29 5.52
2430 2994 1.921230 GAAGAAGCGGAACTTAGAGCG 59.079 52.381 0.00 0.00 39.29 5.03
2431 2995 2.960819 TGAAGAAGCGGAACTTAGAGC 58.039 47.619 0.00 0.00 39.29 4.09
2432 2996 3.365220 CGTTGAAGAAGCGGAACTTAGAG 59.635 47.826 0.00 0.00 39.29 2.43
2433 2997 3.314553 CGTTGAAGAAGCGGAACTTAGA 58.685 45.455 0.00 0.00 39.29 2.10
2434 2998 2.159827 GCGTTGAAGAAGCGGAACTTAG 60.160 50.000 0.00 0.00 39.29 2.18
2435 2999 1.796459 GCGTTGAAGAAGCGGAACTTA 59.204 47.619 0.00 0.00 39.29 2.24
2436 3000 0.586802 GCGTTGAAGAAGCGGAACTT 59.413 50.000 0.00 0.00 42.98 2.66
2437 3001 0.249911 AGCGTTGAAGAAGCGGAACT 60.250 50.000 0.00 0.00 35.78 3.01
2438 3002 1.425412 TAGCGTTGAAGAAGCGGAAC 58.575 50.000 0.00 0.00 35.78 3.62
2439 3003 2.380084 ATAGCGTTGAAGAAGCGGAA 57.620 45.000 0.00 0.00 35.78 4.30
2440 3004 2.380084 AATAGCGTTGAAGAAGCGGA 57.620 45.000 0.00 0.00 35.78 5.54
2441 3005 2.033662 GCTAATAGCGTTGAAGAAGCGG 60.034 50.000 0.00 0.00 35.78 5.52
2442 3006 2.603110 TGCTAATAGCGTTGAAGAAGCG 59.397 45.455 7.84 0.00 46.26 4.68
2443 3007 3.001736 CCTGCTAATAGCGTTGAAGAAGC 59.998 47.826 7.84 0.00 46.26 3.86
2444 3008 3.001736 GCCTGCTAATAGCGTTGAAGAAG 59.998 47.826 7.84 0.00 46.26 2.85
2445 3009 2.936498 GCCTGCTAATAGCGTTGAAGAA 59.064 45.455 7.84 0.00 46.26 2.52
2446 3010 2.168521 AGCCTGCTAATAGCGTTGAAGA 59.831 45.455 7.84 0.00 46.26 2.87
2447 3011 2.541762 GAGCCTGCTAATAGCGTTGAAG 59.458 50.000 7.84 0.00 46.26 3.02
2448 3012 2.550978 GAGCCTGCTAATAGCGTTGAA 58.449 47.619 7.84 0.00 46.26 2.69
2449 3013 1.202533 GGAGCCTGCTAATAGCGTTGA 60.203 52.381 7.84 0.00 46.26 3.18
2450 3014 1.221414 GGAGCCTGCTAATAGCGTTG 58.779 55.000 7.84 0.00 46.26 4.10
2451 3015 0.830648 TGGAGCCTGCTAATAGCGTT 59.169 50.000 7.84 0.00 46.26 4.84
2452 3016 0.830648 TTGGAGCCTGCTAATAGCGT 59.169 50.000 7.84 0.00 46.26 5.07
2453 3017 2.175878 ATTGGAGCCTGCTAATAGCG 57.824 50.000 7.84 2.75 46.26 4.26
2454 3018 6.484977 GGATTATATTGGAGCCTGCTAATAGC 59.515 42.308 5.12 5.12 42.82 2.97
2455 3019 6.995091 GGGATTATATTGGAGCCTGCTAATAG 59.005 42.308 0.00 0.00 0.00 1.73
2456 3020 6.446759 TGGGATTATATTGGAGCCTGCTAATA 59.553 38.462 0.00 0.00 0.00 0.98
2457 3021 5.253798 TGGGATTATATTGGAGCCTGCTAAT 59.746 40.000 0.00 0.00 0.00 1.73
2458 3022 4.601420 TGGGATTATATTGGAGCCTGCTAA 59.399 41.667 0.00 0.00 0.00 3.09
2459 3023 4.175172 TGGGATTATATTGGAGCCTGCTA 58.825 43.478 0.00 0.00 0.00 3.49
2460 3024 2.988859 TGGGATTATATTGGAGCCTGCT 59.011 45.455 0.00 0.00 0.00 4.24
2461 3025 3.439857 TGGGATTATATTGGAGCCTGC 57.560 47.619 0.00 0.00 0.00 4.85
2462 3026 5.246981 TCTTGGGATTATATTGGAGCCTG 57.753 43.478 0.00 0.00 0.00 4.85
2463 3027 4.290722 CCTCTTGGGATTATATTGGAGCCT 59.709 45.833 0.00 0.00 37.23 4.58
2464 3028 4.289672 TCCTCTTGGGATTATATTGGAGCC 59.710 45.833 0.00 0.00 39.58 4.70
2465 3029 5.505181 TCCTCTTGGGATTATATTGGAGC 57.495 43.478 0.00 0.00 39.58 4.70
2466 3030 8.946797 AATTTCCTCTTGGGATTATATTGGAG 57.053 34.615 0.00 0.00 44.66 3.86


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.