Multiple sequence alignment - TraesCS5A01G115600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G115600 chr5A 100.000 2728 0 0 1 2728 234436403 234439130 0.000000e+00 5038
1 TraesCS5A01G115600 chr3A 93.891 1064 65 0 1006 2069 608104333 608105396 0.000000e+00 1605
2 TraesCS5A01G115600 chr3A 90.518 1023 84 5 1 1010 608095690 608096712 0.000000e+00 1339
3 TraesCS5A01G115600 chr3A 89.879 662 43 9 2067 2728 608105430 608106067 0.000000e+00 830
4 TraesCS5A01G115600 chr5D 75.943 1060 199 46 1019 2056 520975440 520974415 6.790000e-136 494
5 TraesCS5A01G115600 chr5D 75.000 652 117 34 1228 1857 288120523 288119896 2.690000e-65 259
6 TraesCS5A01G115600 chr5D 77.752 436 74 15 1228 1655 504978317 504977897 2.100000e-61 246
7 TraesCS5A01G115600 chr5D 93.396 106 7 0 1007 1112 288120707 288120602 1.010000e-34 158
8 TraesCS5A01G115600 chr3D 75.746 1072 202 46 1008 2056 40539915 40538879 1.140000e-133 486
9 TraesCS5A01G115600 chr3D 77.488 844 159 29 1230 2056 520174162 520173333 6.830000e-131 477
10 TraesCS5A01G115600 chr3D 90.741 108 9 1 1008 1115 584740142 584740036 2.830000e-30 143
11 TraesCS5A01G115600 chr1D 77.041 845 161 32 1230 2056 33557932 33557103 3.200000e-124 455
12 TraesCS5A01G115600 chr1D 76.860 847 159 33 1230 2056 404217435 404218264 6.930000e-121 444
13 TraesCS5A01G115600 chr1D 89.815 108 10 1 1008 1115 33558139 33558033 1.320000e-28 137
14 TraesCS5A01G115600 chr2A 78.000 650 111 21 1226 1866 57916780 57917406 1.980000e-101 379
15 TraesCS5A01G115600 chr2A 90.385 104 10 0 1008 1111 57916581 57916684 1.320000e-28 137
16 TraesCS5A01G115600 chr6D 75.311 644 129 29 1228 1857 454887572 454888199 5.750000e-72 281
17 TraesCS5A01G115600 chr6D 75.155 644 130 29 1228 1857 454921126 454921753 2.680000e-70 276
18 TraesCS5A01G115600 chr4A 83.984 256 35 5 1231 1483 137056291 137056039 9.760000e-60 241


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G115600 chr5A 234436403 234439130 2727 False 5038.0 5038 100.0000 1 2728 1 chr5A.!!$F1 2727
1 TraesCS5A01G115600 chr3A 608095690 608096712 1022 False 1339.0 1339 90.5180 1 1010 1 chr3A.!!$F1 1009
2 TraesCS5A01G115600 chr3A 608104333 608106067 1734 False 1217.5 1605 91.8850 1006 2728 2 chr3A.!!$F2 1722
3 TraesCS5A01G115600 chr5D 520974415 520975440 1025 True 494.0 494 75.9430 1019 2056 1 chr5D.!!$R2 1037
4 TraesCS5A01G115600 chr5D 288119896 288120707 811 True 208.5 259 84.1980 1007 1857 2 chr5D.!!$R3 850
5 TraesCS5A01G115600 chr3D 40538879 40539915 1036 True 486.0 486 75.7460 1008 2056 1 chr3D.!!$R1 1048
6 TraesCS5A01G115600 chr3D 520173333 520174162 829 True 477.0 477 77.4880 1230 2056 1 chr3D.!!$R2 826
7 TraesCS5A01G115600 chr1D 404217435 404218264 829 False 444.0 444 76.8600 1230 2056 1 chr1D.!!$F1 826
8 TraesCS5A01G115600 chr1D 33557103 33558139 1036 True 296.0 455 83.4280 1008 2056 2 chr1D.!!$R1 1048
9 TraesCS5A01G115600 chr2A 57916581 57917406 825 False 258.0 379 84.1925 1008 1866 2 chr2A.!!$F1 858
10 TraesCS5A01G115600 chr6D 454887572 454888199 627 False 281.0 281 75.3110 1228 1857 1 chr6D.!!$F1 629
11 TraesCS5A01G115600 chr6D 454921126 454921753 627 False 276.0 276 75.1550 1228 1857 1 chr6D.!!$F2 629

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
754 762 0.032403 GCACTGAGCACATTGCCAAA 59.968 50.0 14.18 0.0 46.52 3.28 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2115 2290 0.460987 CTTCTAGTGCCGGGCAGAAG 60.461 60.0 25.64 25.64 40.08 2.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
46 47 1.616725 CCATCCCTTTGCTGCAACCTA 60.617 52.381 15.72 0.00 0.00 3.08
81 82 4.282195 TGTTTAAATGGGGTAGGCAAACTG 59.718 41.667 0.00 0.00 0.00 3.16
89 90 1.610886 GGTAGGCAAACTGGTGGAGTC 60.611 57.143 0.00 0.00 31.73 3.36
133 134 4.270894 GGCTTGCGTTTCAAATTCAAAAC 58.729 39.130 5.85 5.85 33.65 2.43
134 135 4.201763 GGCTTGCGTTTCAAATTCAAAACA 60.202 37.500 13.14 1.70 35.57 2.83
147 148 0.956410 CAAAACACACGGGCGGGATA 60.956 55.000 0.00 0.00 0.00 2.59
149 150 0.034863 AAACACACGGGCGGGATAAT 60.035 50.000 0.00 0.00 0.00 1.28
150 151 0.034863 AACACACGGGCGGGATAATT 60.035 50.000 0.00 0.00 0.00 1.40
152 153 0.462937 CACACGGGCGGGATAATTCA 60.463 55.000 0.00 0.00 0.00 2.57
153 154 0.253610 ACACGGGCGGGATAATTCAA 59.746 50.000 0.00 0.00 0.00 2.69
155 156 1.746220 CACGGGCGGGATAATTCAAAA 59.254 47.619 0.00 0.00 0.00 2.44
156 157 1.746787 ACGGGCGGGATAATTCAAAAC 59.253 47.619 0.00 0.00 0.00 2.43
188 196 1.378762 GTTGCTACCTGAAGGGGCA 59.621 57.895 12.98 12.98 42.79 5.36
223 231 1.246056 GCTTGGGAGTTGCAGCATGA 61.246 55.000 2.55 0.00 39.69 3.07
232 240 0.392595 TTGCAGCATGAGAGCCTCAG 60.393 55.000 0.00 4.87 44.08 3.35
244 252 0.035458 AGCCTCAGTTCTTTCCCACG 59.965 55.000 0.00 0.00 0.00 4.94
246 254 1.339151 GCCTCAGTTCTTTCCCACGAT 60.339 52.381 0.00 0.00 0.00 3.73
249 257 3.257393 CTCAGTTCTTTCCCACGATGAG 58.743 50.000 0.00 0.00 0.00 2.90
260 268 1.135257 CCACGATGAGTCCTCAGTGAC 60.135 57.143 14.75 0.00 43.61 3.67
264 272 0.613292 ATGAGTCCTCAGTGACCGCT 60.613 55.000 3.10 0.00 43.61 5.52
291 299 2.029020 GGAATTCTCAAAGGGTTGTGGC 60.029 50.000 5.23 0.00 36.07 5.01
301 309 2.109126 GGTTGTGGCCTCTCGATGC 61.109 63.158 3.32 0.00 0.00 3.91
308 316 1.219124 GCCTCTCGATGCAGGTTCA 59.781 57.895 0.00 0.00 31.65 3.18
323 331 4.082125 CAGGTTCATTGCCTTTCCTTAGT 58.918 43.478 0.00 0.00 33.31 2.24
329 337 7.502561 GGTTCATTGCCTTTCCTTAGTATACAT 59.497 37.037 5.50 0.00 0.00 2.29
351 359 5.227569 TCCAACTTAGAAATCTGCTGACA 57.772 39.130 0.00 0.00 0.00 3.58
352 360 5.620206 TCCAACTTAGAAATCTGCTGACAA 58.380 37.500 0.00 0.00 0.00 3.18
354 362 7.394016 TCCAACTTAGAAATCTGCTGACAATA 58.606 34.615 0.00 0.00 0.00 1.90
433 441 1.994463 AGGGAGATGAACCTGTGGC 59.006 57.895 0.00 0.00 35.30 5.01
465 473 3.339141 GAGACTTCAGGGATTTCCACAC 58.661 50.000 0.00 0.00 38.24 3.82
476 484 2.245159 TTTCCACACTGTCTCTGCAG 57.755 50.000 7.63 7.63 41.92 4.41
533 541 4.356405 TGTAGCTTACATGCATGGCTAT 57.644 40.909 27.76 14.03 37.72 2.97
535 543 5.863965 TGTAGCTTACATGCATGGCTATTA 58.136 37.500 27.76 20.42 37.72 0.98
548 556 4.071961 TGGCTATTATGTTCGCAGTCAT 57.928 40.909 0.00 0.00 0.00 3.06
560 568 2.496070 TCGCAGTCATAGCAGGTTAGTT 59.504 45.455 0.00 0.00 0.00 2.24
563 571 4.202020 CGCAGTCATAGCAGGTTAGTTCTA 60.202 45.833 0.00 0.00 0.00 2.10
601 609 6.811634 GATATCCCATCAGAGGAGATCATT 57.188 41.667 9.05 0.00 46.74 2.57
602 610 4.912317 ATCCCATCAGAGGAGATCATTG 57.088 45.455 0.00 0.00 36.67 2.82
603 611 2.371179 TCCCATCAGAGGAGATCATTGC 59.629 50.000 0.00 0.00 0.00 3.56
604 612 2.105993 CCCATCAGAGGAGATCATTGCA 59.894 50.000 0.00 0.00 0.00 4.08
605 613 3.139850 CCATCAGAGGAGATCATTGCAC 58.860 50.000 0.00 0.00 0.00 4.57
606 614 3.433173 CCATCAGAGGAGATCATTGCACA 60.433 47.826 0.00 0.00 0.00 4.57
607 615 3.986996 TCAGAGGAGATCATTGCACAA 57.013 42.857 0.00 0.00 0.00 3.33
608 616 3.870274 TCAGAGGAGATCATTGCACAAG 58.130 45.455 0.00 0.00 0.00 3.16
609 617 2.943690 CAGAGGAGATCATTGCACAAGG 59.056 50.000 0.00 0.00 0.00 3.61
610 618 2.092538 AGAGGAGATCATTGCACAAGGG 60.093 50.000 0.00 0.00 0.00 3.95
611 619 1.918262 AGGAGATCATTGCACAAGGGA 59.082 47.619 0.00 0.00 0.00 4.20
612 620 2.512896 AGGAGATCATTGCACAAGGGAT 59.487 45.455 0.00 0.00 0.00 3.85
613 621 3.053095 AGGAGATCATTGCACAAGGGATT 60.053 43.478 0.00 0.00 0.00 3.01
614 622 3.067742 GGAGATCATTGCACAAGGGATTG 59.932 47.826 0.00 0.00 0.00 2.67
615 623 3.949754 GAGATCATTGCACAAGGGATTGA 59.050 43.478 0.00 0.00 32.84 2.57
616 624 4.346730 AGATCATTGCACAAGGGATTGAA 58.653 39.130 0.00 0.00 32.21 2.69
617 625 4.401519 AGATCATTGCACAAGGGATTGAAG 59.598 41.667 0.00 0.00 32.21 3.02
618 626 2.827322 TCATTGCACAAGGGATTGAAGG 59.173 45.455 0.00 0.00 0.00 3.46
619 627 1.631405 TTGCACAAGGGATTGAAGGG 58.369 50.000 0.00 0.00 0.00 3.95
620 628 0.482446 TGCACAAGGGATTGAAGGGT 59.518 50.000 0.00 0.00 0.00 4.34
621 629 1.707989 TGCACAAGGGATTGAAGGGTA 59.292 47.619 0.00 0.00 0.00 3.69
622 630 2.092323 GCACAAGGGATTGAAGGGTAC 58.908 52.381 0.00 0.00 0.00 3.34
639 647 2.689983 GGTACCCTGATGCATCAAAAGG 59.310 50.000 28.39 27.49 36.18 3.11
640 648 1.856629 ACCCTGATGCATCAAAAGGG 58.143 50.000 34.73 34.73 42.48 3.95
641 649 1.077663 ACCCTGATGCATCAAAAGGGT 59.922 47.619 35.74 35.74 43.96 4.34
642 650 2.181975 CCCTGATGCATCAAAAGGGTT 58.818 47.619 31.06 0.00 35.92 4.11
643 651 2.167075 CCCTGATGCATCAAAAGGGTTC 59.833 50.000 31.06 6.95 35.92 3.62
644 652 2.159338 CCTGATGCATCAAAAGGGTTCG 60.159 50.000 28.39 14.09 36.18 3.95
645 653 1.818060 TGATGCATCAAAAGGGTTCGG 59.182 47.619 26.87 0.00 33.08 4.30
646 654 1.134946 GATGCATCAAAAGGGTTCGGG 59.865 52.381 21.92 0.00 0.00 5.14
647 655 0.897863 TGCATCAAAAGGGTTCGGGG 60.898 55.000 0.00 0.00 0.00 5.73
648 656 0.610785 GCATCAAAAGGGTTCGGGGA 60.611 55.000 0.00 0.00 0.00 4.81
649 657 1.463674 CATCAAAAGGGTTCGGGGAG 58.536 55.000 0.00 0.00 0.00 4.30
650 658 0.323451 ATCAAAAGGGTTCGGGGAGC 60.323 55.000 0.00 0.00 0.00 4.70
651 659 1.228429 CAAAAGGGTTCGGGGAGCA 60.228 57.895 0.00 0.00 0.00 4.26
652 660 0.611896 CAAAAGGGTTCGGGGAGCAT 60.612 55.000 0.00 0.00 0.00 3.79
653 661 0.611896 AAAAGGGTTCGGGGAGCATG 60.612 55.000 0.00 0.00 0.00 4.06
654 662 1.497309 AAAGGGTTCGGGGAGCATGA 61.497 55.000 0.00 0.00 0.00 3.07
655 663 1.281925 AAGGGTTCGGGGAGCATGAT 61.282 55.000 0.00 0.00 0.00 2.45
656 664 1.227973 GGGTTCGGGGAGCATGATC 60.228 63.158 1.26 1.26 0.00 2.92
657 665 1.227973 GGTTCGGGGAGCATGATCC 60.228 63.158 22.09 22.09 38.76 3.36
663 671 2.976903 GGAGCATGATCCCGCTGC 60.977 66.667 19.66 9.59 38.99 5.25
665 673 2.203167 AGCATGATCCCGCTGCTG 60.203 61.111 5.24 0.00 44.21 4.41
666 674 3.962421 GCATGATCCCGCTGCTGC 61.962 66.667 5.34 5.34 33.15 5.25
667 675 2.203167 CATGATCCCGCTGCTGCT 60.203 61.111 14.03 0.00 36.97 4.24
668 676 2.110627 ATGATCCCGCTGCTGCTC 59.889 61.111 14.03 4.90 36.97 4.26
669 677 2.738938 ATGATCCCGCTGCTGCTCA 61.739 57.895 14.03 10.48 36.97 4.26
670 678 2.124983 GATCCCGCTGCTGCTCAA 60.125 61.111 14.03 0.00 36.97 3.02
671 679 2.124819 ATCCCGCTGCTGCTCAAG 60.125 61.111 14.03 0.00 36.97 3.02
672 680 2.866085 GATCCCGCTGCTGCTCAAGT 62.866 60.000 14.03 0.00 36.97 3.16
673 681 3.429141 CCCGCTGCTGCTCAAGTG 61.429 66.667 14.03 0.00 36.97 3.16
674 682 3.429141 CCGCTGCTGCTCAAGTGG 61.429 66.667 14.03 2.20 36.97 4.00
675 683 3.429141 CGCTGCTGCTCAAGTGGG 61.429 66.667 14.03 0.00 36.97 4.61
676 684 3.060615 GCTGCTGCTCAAGTGGGG 61.061 66.667 8.53 0.00 36.03 4.96
677 685 3.060615 CTGCTGCTCAAGTGGGGC 61.061 66.667 0.00 0.00 0.00 5.80
678 686 3.564345 CTGCTGCTCAAGTGGGGCT 62.564 63.158 0.00 0.00 0.00 5.19
679 687 3.060615 GCTGCTCAAGTGGGGCTG 61.061 66.667 0.00 0.00 0.00 4.85
680 688 2.360852 CTGCTCAAGTGGGGCTGG 60.361 66.667 0.00 0.00 0.00 4.85
681 689 4.666253 TGCTCAAGTGGGGCTGGC 62.666 66.667 0.00 0.00 0.00 4.85
691 699 4.424711 GGGCTGGCGGTGGATGAA 62.425 66.667 0.00 0.00 0.00 2.57
692 700 2.825836 GGCTGGCGGTGGATGAAG 60.826 66.667 0.00 0.00 0.00 3.02
693 701 2.825836 GCTGGCGGTGGATGAAGG 60.826 66.667 0.00 0.00 0.00 3.46
694 702 2.825836 CTGGCGGTGGATGAAGGC 60.826 66.667 0.00 0.00 0.00 4.35
695 703 4.776322 TGGCGGTGGATGAAGGCG 62.776 66.667 0.00 0.00 0.00 5.52
696 704 4.778143 GGCGGTGGATGAAGGCGT 62.778 66.667 0.00 0.00 0.00 5.68
697 705 3.499737 GCGGTGGATGAAGGCGTG 61.500 66.667 0.00 0.00 0.00 5.34
698 706 3.499737 CGGTGGATGAAGGCGTGC 61.500 66.667 0.00 0.00 0.00 5.34
699 707 2.359850 GGTGGATGAAGGCGTGCA 60.360 61.111 0.00 0.00 0.00 4.57
700 708 2.401766 GGTGGATGAAGGCGTGCAG 61.402 63.158 0.00 0.00 31.64 4.41
711 719 2.079049 GCGTGCAGCTGTACTTACC 58.921 57.895 28.68 13.04 44.04 2.85
712 720 0.669318 GCGTGCAGCTGTACTTACCA 60.669 55.000 28.68 8.49 44.04 3.25
713 721 1.350193 CGTGCAGCTGTACTTACCAG 58.650 55.000 28.68 11.41 0.00 4.00
714 722 1.067846 CGTGCAGCTGTACTTACCAGA 60.068 52.381 28.68 0.00 0.00 3.86
715 723 2.417379 CGTGCAGCTGTACTTACCAGAT 60.417 50.000 28.68 0.00 0.00 2.90
716 724 2.932614 GTGCAGCTGTACTTACCAGATG 59.067 50.000 25.57 1.56 35.68 2.90
717 725 2.831526 TGCAGCTGTACTTACCAGATGA 59.168 45.455 16.64 0.00 34.65 2.92
718 726 3.452264 TGCAGCTGTACTTACCAGATGAT 59.548 43.478 16.64 0.00 34.65 2.45
719 727 3.806521 GCAGCTGTACTTACCAGATGATG 59.193 47.826 16.64 0.00 34.65 3.07
720 728 4.442052 GCAGCTGTACTTACCAGATGATGA 60.442 45.833 16.64 0.00 34.65 2.92
721 729 5.046529 CAGCTGTACTTACCAGATGATGAC 58.953 45.833 5.25 0.00 34.65 3.06
722 730 4.045104 GCTGTACTTACCAGATGATGACG 58.955 47.826 0.00 0.00 0.00 4.35
723 731 4.202020 GCTGTACTTACCAGATGATGACGA 60.202 45.833 0.00 0.00 0.00 4.20
724 732 5.244785 TGTACTTACCAGATGATGACGAC 57.755 43.478 0.00 0.00 0.00 4.34
725 733 3.422417 ACTTACCAGATGATGACGACG 57.578 47.619 0.00 0.00 0.00 5.12
726 734 2.753452 ACTTACCAGATGATGACGACGT 59.247 45.455 0.00 0.00 0.00 4.34
727 735 2.844122 TACCAGATGATGACGACGTG 57.156 50.000 4.58 0.00 0.00 4.49
728 736 0.173481 ACCAGATGATGACGACGTGG 59.827 55.000 4.58 0.00 0.00 4.94
729 737 0.455815 CCAGATGATGACGACGTGGA 59.544 55.000 4.58 0.00 0.00 4.02
730 738 1.135112 CCAGATGATGACGACGTGGAA 60.135 52.381 4.58 0.00 0.00 3.53
731 739 2.188524 CAGATGATGACGACGTGGAAG 58.811 52.381 4.58 0.00 0.00 3.46
732 740 2.092323 AGATGATGACGACGTGGAAGA 58.908 47.619 4.58 0.00 0.00 2.87
733 741 2.098280 AGATGATGACGACGTGGAAGAG 59.902 50.000 4.58 0.00 0.00 2.85
734 742 1.530323 TGATGACGACGTGGAAGAGA 58.470 50.000 4.58 0.00 0.00 3.10
735 743 1.468914 TGATGACGACGTGGAAGAGAG 59.531 52.381 4.58 0.00 0.00 3.20
736 744 0.171455 ATGACGACGTGGAAGAGAGC 59.829 55.000 4.58 0.00 0.00 4.09
737 745 1.170290 TGACGACGTGGAAGAGAGCA 61.170 55.000 4.58 0.00 0.00 4.26
738 746 0.729816 GACGACGTGGAAGAGAGCAC 60.730 60.000 4.58 0.00 0.00 4.40
739 747 1.173444 ACGACGTGGAAGAGAGCACT 61.173 55.000 3.97 0.00 0.00 4.40
740 748 0.730834 CGACGTGGAAGAGAGCACTG 60.731 60.000 0.00 0.00 0.00 3.66
741 749 0.598562 GACGTGGAAGAGAGCACTGA 59.401 55.000 0.00 0.00 0.00 3.41
742 750 0.600557 ACGTGGAAGAGAGCACTGAG 59.399 55.000 0.00 0.00 0.00 3.35
743 751 0.735632 CGTGGAAGAGAGCACTGAGC 60.736 60.000 0.00 0.00 46.19 4.26
752 760 3.357919 GCACTGAGCACATTGCCA 58.642 55.556 14.18 0.00 46.52 4.92
753 761 1.661480 GCACTGAGCACATTGCCAA 59.339 52.632 14.18 0.00 46.52 4.52
754 762 0.032403 GCACTGAGCACATTGCCAAA 59.968 50.000 14.18 0.00 46.52 3.28
755 763 1.774639 CACTGAGCACATTGCCAAAC 58.225 50.000 0.00 0.00 46.52 2.93
756 764 0.311790 ACTGAGCACATTGCCAAACG 59.688 50.000 0.00 0.00 46.52 3.60
757 765 1.005294 CTGAGCACATTGCCAAACGC 61.005 55.000 0.00 0.00 46.52 4.84
758 766 1.286880 GAGCACATTGCCAAACGCT 59.713 52.632 0.00 0.00 46.52 5.07
759 767 0.730494 GAGCACATTGCCAAACGCTC 60.730 55.000 9.43 9.43 46.52 5.03
760 768 1.007502 GCACATTGCCAAACGCTCA 60.008 52.632 0.00 0.00 37.42 4.26
761 769 0.597118 GCACATTGCCAAACGCTCAA 60.597 50.000 0.00 0.00 37.42 3.02
762 770 1.411394 CACATTGCCAAACGCTCAAG 58.589 50.000 0.00 0.00 38.78 3.02
763 771 1.001487 CACATTGCCAAACGCTCAAGA 60.001 47.619 0.00 0.00 38.78 3.02
764 772 1.001378 ACATTGCCAAACGCTCAAGAC 60.001 47.619 0.00 0.00 38.78 3.01
765 773 1.267806 CATTGCCAAACGCTCAAGACT 59.732 47.619 0.00 0.00 38.78 3.24
766 774 0.662619 TTGCCAAACGCTCAAGACTG 59.337 50.000 0.00 0.00 38.78 3.51
767 775 0.179059 TGCCAAACGCTCAAGACTGA 60.179 50.000 0.00 0.00 38.78 3.41
768 776 0.944386 GCCAAACGCTCAAGACTGAA 59.056 50.000 0.00 0.00 0.00 3.02
769 777 1.334149 GCCAAACGCTCAAGACTGAAC 60.334 52.381 0.00 0.00 0.00 3.18
770 778 1.070577 CCAAACGCTCAAGACTGAACG 60.071 52.381 0.00 0.00 44.80 3.95
771 779 0.582005 AAACGCTCAAGACTGAACGC 59.418 50.000 0.00 0.00 43.43 4.84
772 780 1.222115 AACGCTCAAGACTGAACGCC 61.222 55.000 0.00 0.00 43.43 5.68
773 781 1.373497 CGCTCAAGACTGAACGCCT 60.373 57.895 0.00 0.00 34.65 5.52
774 782 1.621301 CGCTCAAGACTGAACGCCTG 61.621 60.000 0.00 0.00 34.65 4.85
775 783 0.319900 GCTCAAGACTGAACGCCTGA 60.320 55.000 0.00 0.00 0.00 3.86
776 784 1.674221 GCTCAAGACTGAACGCCTGAT 60.674 52.381 0.00 0.00 0.00 2.90
777 785 2.693069 CTCAAGACTGAACGCCTGATT 58.307 47.619 0.00 0.00 0.00 2.57
778 786 3.070018 CTCAAGACTGAACGCCTGATTT 58.930 45.455 0.00 0.00 0.00 2.17
779 787 4.245660 CTCAAGACTGAACGCCTGATTTA 58.754 43.478 0.00 0.00 0.00 1.40
780 788 3.994392 TCAAGACTGAACGCCTGATTTAC 59.006 43.478 0.00 0.00 0.00 2.01
781 789 3.963428 AGACTGAACGCCTGATTTACT 57.037 42.857 0.00 0.00 0.00 2.24
782 790 3.851098 AGACTGAACGCCTGATTTACTC 58.149 45.455 0.00 0.00 0.00 2.59
783 791 3.511934 AGACTGAACGCCTGATTTACTCT 59.488 43.478 0.00 0.00 0.00 3.24
784 792 4.021016 AGACTGAACGCCTGATTTACTCTT 60.021 41.667 0.00 0.00 0.00 2.85
785 793 3.997021 ACTGAACGCCTGATTTACTCTTG 59.003 43.478 0.00 0.00 0.00 3.02
786 794 3.997021 CTGAACGCCTGATTTACTCTTGT 59.003 43.478 0.00 0.00 0.00 3.16
787 795 3.745975 TGAACGCCTGATTTACTCTTGTG 59.254 43.478 0.00 0.00 0.00 3.33
788 796 2.076863 ACGCCTGATTTACTCTTGTGC 58.923 47.619 0.00 0.00 0.00 4.57
789 797 2.289694 ACGCCTGATTTACTCTTGTGCT 60.290 45.455 0.00 0.00 0.00 4.40
790 798 3.056107 ACGCCTGATTTACTCTTGTGCTA 60.056 43.478 0.00 0.00 0.00 3.49
791 799 3.932710 CGCCTGATTTACTCTTGTGCTAA 59.067 43.478 0.00 0.00 0.00 3.09
792 800 4.033358 CGCCTGATTTACTCTTGTGCTAAG 59.967 45.833 0.00 0.00 0.00 2.18
793 801 4.938226 GCCTGATTTACTCTTGTGCTAAGT 59.062 41.667 2.08 0.00 0.00 2.24
794 802 6.106673 GCCTGATTTACTCTTGTGCTAAGTA 58.893 40.000 2.08 0.00 0.00 2.24
795 803 6.256757 GCCTGATTTACTCTTGTGCTAAGTAG 59.743 42.308 2.08 2.06 0.00 2.57
796 804 7.548097 CCTGATTTACTCTTGTGCTAAGTAGA 58.452 38.462 2.08 0.00 0.00 2.59
797 805 7.704472 CCTGATTTACTCTTGTGCTAAGTAGAG 59.296 40.741 0.00 0.00 39.93 2.43
798 806 8.349568 TGATTTACTCTTGTGCTAAGTAGAGA 57.650 34.615 0.00 0.00 37.99 3.10
799 807 8.244802 TGATTTACTCTTGTGCTAAGTAGAGAC 58.755 37.037 0.00 0.00 37.99 3.36
800 808 7.520451 TTTACTCTTGTGCTAAGTAGAGACA 57.480 36.000 0.00 0.00 37.99 3.41
801 809 5.637006 ACTCTTGTGCTAAGTAGAGACAG 57.363 43.478 0.00 0.00 37.99 3.51
802 810 5.317808 ACTCTTGTGCTAAGTAGAGACAGA 58.682 41.667 0.00 0.00 37.99 3.41
803 811 5.414454 ACTCTTGTGCTAAGTAGAGACAGAG 59.586 44.000 0.00 0.00 37.99 3.35
804 812 5.317808 TCTTGTGCTAAGTAGAGACAGAGT 58.682 41.667 2.08 0.00 0.00 3.24
805 813 6.473758 TCTTGTGCTAAGTAGAGACAGAGTA 58.526 40.000 2.08 0.00 0.00 2.59
806 814 6.596106 TCTTGTGCTAAGTAGAGACAGAGTAG 59.404 42.308 2.08 0.00 0.00 2.57
807 815 5.186942 TGTGCTAAGTAGAGACAGAGTAGG 58.813 45.833 0.00 0.00 0.00 3.18
808 816 4.035909 GTGCTAAGTAGAGACAGAGTAGGC 59.964 50.000 0.00 0.00 0.00 3.93
809 817 4.200874 GCTAAGTAGAGACAGAGTAGGCA 58.799 47.826 0.00 0.00 0.00 4.75
810 818 4.641094 GCTAAGTAGAGACAGAGTAGGCAA 59.359 45.833 0.00 0.00 0.00 4.52
811 819 5.300792 GCTAAGTAGAGACAGAGTAGGCAAT 59.699 44.000 0.00 0.00 0.00 3.56
812 820 5.590530 AAGTAGAGACAGAGTAGGCAATG 57.409 43.478 0.00 0.00 0.00 2.82
813 821 4.861196 AGTAGAGACAGAGTAGGCAATGA 58.139 43.478 0.00 0.00 0.00 2.57
814 822 5.454062 AGTAGAGACAGAGTAGGCAATGAT 58.546 41.667 0.00 0.00 0.00 2.45
815 823 4.669206 AGAGACAGAGTAGGCAATGATG 57.331 45.455 0.00 0.00 0.00 3.07
829 837 4.931661 CAATGATGCCTTTGCCTTCTAT 57.068 40.909 0.00 0.00 36.33 1.98
830 838 4.868067 CAATGATGCCTTTGCCTTCTATC 58.132 43.478 0.00 0.00 36.33 2.08
831 839 3.939740 TGATGCCTTTGCCTTCTATCT 57.060 42.857 0.00 0.00 36.33 1.98
832 840 3.548770 TGATGCCTTTGCCTTCTATCTG 58.451 45.455 0.00 0.00 36.33 2.90
833 841 3.200605 TGATGCCTTTGCCTTCTATCTGA 59.799 43.478 0.00 0.00 36.33 3.27
834 842 2.991250 TGCCTTTGCCTTCTATCTGAC 58.009 47.619 0.00 0.00 36.33 3.51
835 843 2.573462 TGCCTTTGCCTTCTATCTGACT 59.427 45.455 0.00 0.00 36.33 3.41
836 844 3.009473 TGCCTTTGCCTTCTATCTGACTT 59.991 43.478 0.00 0.00 36.33 3.01
837 845 3.625313 GCCTTTGCCTTCTATCTGACTTC 59.375 47.826 0.00 0.00 0.00 3.01
838 846 4.625083 GCCTTTGCCTTCTATCTGACTTCT 60.625 45.833 0.00 0.00 0.00 2.85
839 847 4.874966 CCTTTGCCTTCTATCTGACTTCTG 59.125 45.833 0.00 0.00 0.00 3.02
840 848 5.486526 CTTTGCCTTCTATCTGACTTCTGT 58.513 41.667 0.00 0.00 0.00 3.41
841 849 6.351371 CCTTTGCCTTCTATCTGACTTCTGTA 60.351 42.308 0.00 0.00 0.00 2.74
842 850 5.584253 TGCCTTCTATCTGACTTCTGTAC 57.416 43.478 0.00 0.00 0.00 2.90
843 851 5.265191 TGCCTTCTATCTGACTTCTGTACT 58.735 41.667 0.00 0.00 0.00 2.73
844 852 5.126222 TGCCTTCTATCTGACTTCTGTACTG 59.874 44.000 0.00 0.00 0.00 2.74
845 853 5.358442 GCCTTCTATCTGACTTCTGTACTGA 59.642 44.000 0.00 0.00 0.00 3.41
846 854 6.127591 GCCTTCTATCTGACTTCTGTACTGAA 60.128 42.308 13.74 13.74 0.00 3.02
847 855 7.417342 GCCTTCTATCTGACTTCTGTACTGAAT 60.417 40.741 14.67 6.43 0.00 2.57
848 856 9.126151 CCTTCTATCTGACTTCTGTACTGAATA 57.874 37.037 14.67 3.98 0.00 1.75
856 864 9.227490 CTGACTTCTGTACTGAATAATTAGTCG 57.773 37.037 14.67 9.96 0.00 4.18
857 865 8.737175 TGACTTCTGTACTGAATAATTAGTCGT 58.263 33.333 14.67 10.74 0.00 4.34
858 866 8.912787 ACTTCTGTACTGAATAATTAGTCGTG 57.087 34.615 14.67 10.60 0.00 4.35
859 867 8.521176 ACTTCTGTACTGAATAATTAGTCGTGT 58.479 33.333 14.67 14.43 0.00 4.49
860 868 8.683550 TTCTGTACTGAATAATTAGTCGTGTG 57.316 34.615 10.80 7.26 0.00 3.82
861 869 7.823665 TCTGTACTGAATAATTAGTCGTGTGT 58.176 34.615 16.35 11.25 0.00 3.72
862 870 8.949177 TCTGTACTGAATAATTAGTCGTGTGTA 58.051 33.333 16.35 10.54 0.00 2.90
863 871 8.900511 TGTACTGAATAATTAGTCGTGTGTAC 57.099 34.615 19.40 19.40 0.00 2.90
864 872 8.733458 TGTACTGAATAATTAGTCGTGTGTACT 58.267 33.333 22.73 0.00 0.00 2.73
867 875 9.731819 ACTGAATAATTAGTCGTGTGTACTATG 57.268 33.333 8.28 0.00 29.86 2.23
868 876 9.731819 CTGAATAATTAGTCGTGTGTACTATGT 57.268 33.333 8.28 0.00 29.86 2.29
874 882 9.512435 AATTAGTCGTGTGTACTATGTATCAAC 57.488 33.333 0.00 0.00 29.86 3.18
875 883 6.754702 AGTCGTGTGTACTATGTATCAACT 57.245 37.500 0.00 0.00 0.00 3.16
876 884 7.854557 AGTCGTGTGTACTATGTATCAACTA 57.145 36.000 0.00 0.00 0.00 2.24
877 885 7.917597 AGTCGTGTGTACTATGTATCAACTAG 58.082 38.462 0.00 0.00 0.00 2.57
878 886 7.767659 AGTCGTGTGTACTATGTATCAACTAGA 59.232 37.037 0.00 0.00 0.00 2.43
879 887 8.557864 GTCGTGTGTACTATGTATCAACTAGAT 58.442 37.037 0.00 0.00 40.86 1.98
880 888 8.771766 TCGTGTGTACTATGTATCAACTAGATC 58.228 37.037 0.00 0.00 38.19 2.75
881 889 8.557029 CGTGTGTACTATGTATCAACTAGATCA 58.443 37.037 0.00 0.00 38.19 2.92
882 890 9.885934 GTGTGTACTATGTATCAACTAGATCAG 57.114 37.037 0.00 0.00 38.19 2.90
883 891 8.568794 TGTGTACTATGTATCAACTAGATCAGC 58.431 37.037 0.00 0.00 38.19 4.26
884 892 8.568794 GTGTACTATGTATCAACTAGATCAGCA 58.431 37.037 0.00 0.00 38.19 4.41
885 893 8.787852 TGTACTATGTATCAACTAGATCAGCAG 58.212 37.037 0.00 0.00 38.19 4.24
886 894 7.831691 ACTATGTATCAACTAGATCAGCAGT 57.168 36.000 0.00 0.00 38.19 4.40
887 895 8.926092 ACTATGTATCAACTAGATCAGCAGTA 57.074 34.615 0.00 0.00 38.19 2.74
888 896 9.008965 ACTATGTATCAACTAGATCAGCAGTAG 57.991 37.037 0.00 0.00 38.19 2.57
889 897 7.831691 ATGTATCAACTAGATCAGCAGTAGT 57.168 36.000 0.00 0.00 38.19 2.73
890 898 7.646548 TGTATCAACTAGATCAGCAGTAGTT 57.353 36.000 0.00 0.00 37.46 2.24
891 899 8.747538 TGTATCAACTAGATCAGCAGTAGTTA 57.252 34.615 0.00 0.00 35.30 2.24
892 900 8.841300 TGTATCAACTAGATCAGCAGTAGTTAG 58.159 37.037 0.00 1.68 35.30 2.34
893 901 9.058174 GTATCAACTAGATCAGCAGTAGTTAGA 57.942 37.037 0.00 5.68 35.30 2.10
894 902 7.561021 TCAACTAGATCAGCAGTAGTTAGAG 57.439 40.000 0.00 0.00 35.30 2.43
895 903 6.038825 TCAACTAGATCAGCAGTAGTTAGAGC 59.961 42.308 0.00 0.00 35.30 4.09
896 904 3.980646 AGATCAGCAGTAGTTAGAGCG 57.019 47.619 0.00 0.00 0.00 5.03
897 905 3.283751 AGATCAGCAGTAGTTAGAGCGT 58.716 45.455 0.00 0.00 0.00 5.07
898 906 4.452825 AGATCAGCAGTAGTTAGAGCGTA 58.547 43.478 0.00 0.00 0.00 4.42
899 907 4.513692 AGATCAGCAGTAGTTAGAGCGTAG 59.486 45.833 0.00 0.00 0.00 3.51
900 908 3.607741 TCAGCAGTAGTTAGAGCGTAGT 58.392 45.455 0.00 0.00 0.00 2.73
901 909 4.008330 TCAGCAGTAGTTAGAGCGTAGTT 58.992 43.478 0.00 0.00 0.00 2.24
902 910 4.099120 CAGCAGTAGTTAGAGCGTAGTTG 58.901 47.826 0.00 0.00 0.00 3.16
903 911 3.757493 AGCAGTAGTTAGAGCGTAGTTGT 59.243 43.478 0.00 0.00 0.00 3.32
904 912 4.217983 AGCAGTAGTTAGAGCGTAGTTGTT 59.782 41.667 0.00 0.00 0.00 2.83
905 913 4.922103 GCAGTAGTTAGAGCGTAGTTGTTT 59.078 41.667 0.00 0.00 0.00 2.83
906 914 5.164080 GCAGTAGTTAGAGCGTAGTTGTTTG 60.164 44.000 0.00 0.00 0.00 2.93
907 915 6.147581 CAGTAGTTAGAGCGTAGTTGTTTGA 58.852 40.000 0.00 0.00 0.00 2.69
908 916 6.639686 CAGTAGTTAGAGCGTAGTTGTTTGAA 59.360 38.462 0.00 0.00 0.00 2.69
909 917 6.862090 AGTAGTTAGAGCGTAGTTGTTTGAAG 59.138 38.462 0.00 0.00 0.00 3.02
910 918 4.448060 AGTTAGAGCGTAGTTGTTTGAAGC 59.552 41.667 0.00 0.00 0.00 3.86
911 919 2.143925 AGAGCGTAGTTGTTTGAAGCC 58.856 47.619 0.00 0.00 0.00 4.35
912 920 1.871039 GAGCGTAGTTGTTTGAAGCCA 59.129 47.619 0.00 0.00 0.00 4.75
913 921 2.289547 GAGCGTAGTTGTTTGAAGCCAA 59.710 45.455 0.00 0.00 0.00 4.52
914 922 2.290641 AGCGTAGTTGTTTGAAGCCAAG 59.709 45.455 0.00 0.00 33.23 3.61
915 923 2.032924 GCGTAGTTGTTTGAAGCCAAGT 59.967 45.455 0.00 0.00 33.23 3.16
916 924 3.249080 GCGTAGTTGTTTGAAGCCAAGTA 59.751 43.478 0.00 0.00 33.23 2.24
917 925 4.769215 CGTAGTTGTTTGAAGCCAAGTAC 58.231 43.478 11.52 11.52 41.13 2.73
918 926 4.271533 CGTAGTTGTTTGAAGCCAAGTACA 59.728 41.667 17.30 0.00 43.12 2.90
919 927 5.220700 CGTAGTTGTTTGAAGCCAAGTACAA 60.221 40.000 17.30 3.98 43.12 2.41
920 928 5.652994 AGTTGTTTGAAGCCAAGTACAAA 57.347 34.783 0.00 0.00 35.80 2.83
921 929 5.407502 AGTTGTTTGAAGCCAAGTACAAAC 58.592 37.500 0.00 0.00 46.57 2.93
922 930 5.185056 AGTTGTTTGAAGCCAAGTACAAACT 59.815 36.000 17.83 0.00 46.54 2.66
924 932 5.646606 TGTTTGAAGCCAAGTACAAACTTC 58.353 37.500 17.83 3.53 44.28 3.01
925 933 5.417580 TGTTTGAAGCCAAGTACAAACTTCT 59.582 36.000 17.83 0.00 44.28 2.85
926 934 5.499139 TTGAAGCCAAGTACAAACTTCTG 57.501 39.130 14.81 0.00 44.28 3.02
927 935 4.523083 TGAAGCCAAGTACAAACTTCTGT 58.477 39.130 14.81 0.00 44.28 3.41
928 936 5.676552 TGAAGCCAAGTACAAACTTCTGTA 58.323 37.500 14.81 0.00 44.28 2.74
942 950 8.135529 ACAAACTTCTGTACTTAAAGAAATGCC 58.864 33.333 8.73 0.00 32.23 4.40
943 951 8.352942 CAAACTTCTGTACTTAAAGAAATGCCT 58.647 33.333 8.73 0.00 32.23 4.75
944 952 7.674471 ACTTCTGTACTTAAAGAAATGCCTC 57.326 36.000 8.73 0.00 32.23 4.70
945 953 7.454225 ACTTCTGTACTTAAAGAAATGCCTCT 58.546 34.615 8.73 0.00 32.23 3.69
946 954 7.389053 ACTTCTGTACTTAAAGAAATGCCTCTG 59.611 37.037 8.73 0.00 32.23 3.35
947 955 5.643777 TCTGTACTTAAAGAAATGCCTCTGC 59.356 40.000 0.00 0.00 38.26 4.26
948 956 4.700213 TGTACTTAAAGAAATGCCTCTGCC 59.300 41.667 0.00 0.00 36.33 4.85
949 957 2.749621 ACTTAAAGAAATGCCTCTGCCG 59.250 45.455 0.00 0.00 36.33 5.69
950 958 2.489938 TAAAGAAATGCCTCTGCCGT 57.510 45.000 0.00 0.00 36.33 5.68
951 959 2.489938 AAAGAAATGCCTCTGCCGTA 57.510 45.000 0.00 0.00 36.33 4.02
952 960 2.717639 AAGAAATGCCTCTGCCGTAT 57.282 45.000 0.00 0.00 36.33 3.06
953 961 1.959042 AGAAATGCCTCTGCCGTATG 58.041 50.000 0.00 0.00 36.33 2.39
954 962 1.486310 AGAAATGCCTCTGCCGTATGA 59.514 47.619 0.00 0.00 36.33 2.15
955 963 1.599542 GAAATGCCTCTGCCGTATGAC 59.400 52.381 0.00 0.00 36.33 3.06
956 964 0.833287 AATGCCTCTGCCGTATGACT 59.167 50.000 0.00 0.00 36.33 3.41
957 965 0.390860 ATGCCTCTGCCGTATGACTC 59.609 55.000 0.00 0.00 36.33 3.36
958 966 0.684479 TGCCTCTGCCGTATGACTCT 60.684 55.000 0.00 0.00 36.33 3.24
959 967 0.461961 GCCTCTGCCGTATGACTCTT 59.538 55.000 0.00 0.00 0.00 2.85
960 968 1.804372 GCCTCTGCCGTATGACTCTTG 60.804 57.143 0.00 0.00 0.00 3.02
961 969 1.478510 CCTCTGCCGTATGACTCTTGT 59.521 52.381 0.00 0.00 0.00 3.16
962 970 2.688446 CCTCTGCCGTATGACTCTTGTA 59.312 50.000 0.00 0.00 0.00 2.41
963 971 3.319405 CCTCTGCCGTATGACTCTTGTAT 59.681 47.826 0.00 0.00 0.00 2.29
964 972 4.202161 CCTCTGCCGTATGACTCTTGTATT 60.202 45.833 0.00 0.00 0.00 1.89
965 973 5.009710 CCTCTGCCGTATGACTCTTGTATTA 59.990 44.000 0.00 0.00 0.00 0.98
966 974 6.294787 CCTCTGCCGTATGACTCTTGTATTAT 60.295 42.308 0.00 0.00 0.00 1.28
967 975 7.050970 TCTGCCGTATGACTCTTGTATTATT 57.949 36.000 0.00 0.00 0.00 1.40
968 976 7.497595 TCTGCCGTATGACTCTTGTATTATTT 58.502 34.615 0.00 0.00 0.00 1.40
969 977 8.635328 TCTGCCGTATGACTCTTGTATTATTTA 58.365 33.333 0.00 0.00 0.00 1.40
970 978 9.424319 CTGCCGTATGACTCTTGTATTATTTAT 57.576 33.333 0.00 0.00 0.00 1.40
971 979 9.772973 TGCCGTATGACTCTTGTATTATTTATT 57.227 29.630 0.00 0.00 0.00 1.40
993 1001 9.997482 TTATTAAGTTGGTTTGAGATTAATCGC 57.003 29.630 11.83 11.83 0.00 4.58
994 1002 4.600012 AGTTGGTTTGAGATTAATCGCG 57.400 40.909 13.55 0.00 0.00 5.87
995 1003 4.000988 AGTTGGTTTGAGATTAATCGCGT 58.999 39.130 13.55 0.00 0.00 6.01
996 1004 4.088648 GTTGGTTTGAGATTAATCGCGTG 58.911 43.478 13.55 0.00 0.00 5.34
997 1005 3.591023 TGGTTTGAGATTAATCGCGTGA 58.409 40.909 13.55 0.00 0.00 4.35
998 1006 3.616821 TGGTTTGAGATTAATCGCGTGAG 59.383 43.478 13.55 0.00 0.00 3.51
1163 1179 5.991328 ATATGATGTTTTGTAGTCCGCAG 57.009 39.130 0.00 0.00 0.00 5.18
1170 1186 3.394674 TTTGTAGTCCGCAGATGTTCA 57.605 42.857 0.00 0.00 0.00 3.18
1176 1192 3.461061 AGTCCGCAGATGTTCATACATG 58.539 45.455 0.00 0.00 44.90 3.21
1420 1440 4.845796 TGCATACATGAGAATATCCCTGGA 59.154 41.667 0.00 0.00 0.00 3.86
1506 1557 8.471609 TGAGATGTATGTTCAAAATGCAATCAT 58.528 29.630 0.00 0.00 33.53 2.45
1572 1653 5.587443 TGACTGATTTGATGTGATGATGGAC 59.413 40.000 0.00 0.00 0.00 4.02
1613 1696 2.542595 GCTGCACGTTGTAAACTACAGT 59.457 45.455 0.00 0.00 46.99 3.55
1657 1740 1.077716 AGAATGTGCTAACCCCGGC 60.078 57.895 0.00 0.00 0.00 6.13
1702 1833 7.872113 ATATTGAATCCTTGGTTCAACTCTC 57.128 36.000 4.76 0.00 45.27 3.20
1709 1840 6.187727 TCCTTGGTTCAACTCTCTAAACAT 57.812 37.500 0.00 0.00 0.00 2.71
1720 1851 4.271533 ACTCTCTAAACATCTAGTCGAGCG 59.728 45.833 0.00 0.00 0.00 5.03
1746 1884 7.645340 GTGCCTAATTGTCATGTTCATTATGTC 59.355 37.037 0.00 0.00 0.00 3.06
1840 1978 3.882444 CTCCCAGATTTCATGCTTGAGA 58.118 45.455 2.23 0.00 32.27 3.27
1846 1984 5.415077 CCAGATTTCATGCTTGAGAAAGTCT 59.585 40.000 2.23 0.00 37.19 3.24
1859 1997 6.114187 TGAGAAAGTCTTGCCATTCTAGAA 57.886 37.500 7.82 7.82 32.54 2.10
1905 2043 1.396648 TGGAACAGTATTTGCGCGATG 59.603 47.619 12.10 0.00 0.00 3.84
1906 2044 1.663643 GGAACAGTATTTGCGCGATGA 59.336 47.619 12.10 0.00 0.00 2.92
1908 2046 2.010145 ACAGTATTTGCGCGATGAGT 57.990 45.000 12.10 0.00 0.00 3.41
1930 2069 9.605275 TGAGTAAGAATCCTGTTTGAATATGAG 57.395 33.333 0.00 0.00 0.00 2.90
1939 2078 4.647611 TGTTTGAATATGAGGACAACCGT 58.352 39.130 0.00 0.00 41.83 4.83
1961 2100 0.035439 ATGTTAGTTGCCTCCCCACG 60.035 55.000 0.00 0.00 0.00 4.94
1985 2124 1.885560 TGTGGTGTGGTAATGGTTCG 58.114 50.000 0.00 0.00 0.00 3.95
2001 2140 2.999739 TTCGAACGGTTGACCAGCCC 63.000 60.000 0.00 0.00 35.14 5.19
2018 2157 3.318839 CAGCCCATGAAAACTGAAGACAA 59.681 43.478 0.00 0.00 31.67 3.18
2070 2245 2.435805 TGCACCCTCCTTCTGATATGAC 59.564 50.000 0.00 0.00 0.00 3.06
2114 2289 3.563808 GCGTATGTAGGATTGCCATTTGA 59.436 43.478 0.00 0.00 36.29 2.69
2115 2290 4.554723 GCGTATGTAGGATTGCCATTTGAC 60.555 45.833 0.00 0.00 36.29 3.18
2117 2292 5.296780 CGTATGTAGGATTGCCATTTGACTT 59.703 40.000 0.00 0.00 36.29 3.01
2120 2295 4.701651 TGTAGGATTGCCATTTGACTTCTG 59.298 41.667 0.00 0.00 36.29 3.02
2152 2327 0.109086 AGACTGAAGACATCACGGCG 60.109 55.000 4.80 4.80 33.47 6.46
2162 2337 0.572590 CATCACGGCGTCGAGAATTC 59.427 55.000 20.03 0.00 39.23 2.17
2163 2338 0.172578 ATCACGGCGTCGAGAATTCA 59.827 50.000 20.03 0.00 39.23 2.57
2171 2346 3.364964 GGCGTCGAGAATTCACACAATTT 60.365 43.478 8.44 0.00 0.00 1.82
2180 2355 2.330231 TCACACAATTTAGCTTGCGC 57.670 45.000 0.00 0.00 0.00 6.09
2196 2371 1.074248 CGCCCCCAACTAAAGTGGT 59.926 57.895 0.00 0.00 0.00 4.16
2244 2419 5.116180 TGTATGCCATGTACTAGTTCAAGC 58.884 41.667 16.26 16.26 0.00 4.01
2252 2427 4.385825 TGTACTAGTTCAAGCCAAACCTG 58.614 43.478 0.00 0.00 0.00 4.00
2269 2444 6.200665 CCAAACCTGTTTGTGACATTTATGTG 59.799 38.462 18.49 0.00 46.19 3.21
2289 2464 6.405278 TGTGAGAAGACAGTCATGTTTAGA 57.595 37.500 2.66 0.00 40.68 2.10
2312 2487 7.152645 AGACTGTTCATTGTGTAAGACGTAAT 58.847 34.615 0.00 0.00 0.00 1.89
2341 2516 6.294286 GGACTCCGACAATTAATTTTGAACCA 60.294 38.462 0.00 0.00 0.00 3.67
2360 2535 3.273434 CCATACTGTTGTGTGCTAGCAT 58.727 45.455 22.51 4.40 34.54 3.79
2365 2540 4.641396 ACTGTTGTGTGCTAGCATTTCTA 58.359 39.130 22.51 8.53 0.00 2.10
2376 2551 5.887598 TGCTAGCATTTCTATGATGTTTGGT 59.112 36.000 14.93 0.00 33.37 3.67
2390 2565 3.502920 TGTTTGGTTTGTGCGTAAACTG 58.497 40.909 13.23 0.00 39.78 3.16
2474 2649 1.694150 TGGGTATGCCTCTGACATAGC 59.306 52.381 0.00 8.26 44.12 2.97
2475 2650 1.694150 GGGTATGCCTCTGACATAGCA 59.306 52.381 15.13 5.10 45.77 3.49
2507 2682 3.369400 CGAAACATGGCGGGGCAA 61.369 61.111 0.00 0.00 0.00 4.52
2510 2685 1.815817 GAAACATGGCGGGGCAAAGT 61.816 55.000 0.00 0.00 0.00 2.66
2526 2701 3.550842 GCAAAGTGTGGGTGAAGCTTTAG 60.551 47.826 0.00 0.00 0.00 1.85
2527 2702 3.857157 AAGTGTGGGTGAAGCTTTAGA 57.143 42.857 0.00 0.00 0.00 2.10
2528 2703 3.857157 AGTGTGGGTGAAGCTTTAGAA 57.143 42.857 0.00 0.00 0.00 2.10
2529 2704 3.477530 AGTGTGGGTGAAGCTTTAGAAC 58.522 45.455 0.00 0.00 0.00 3.01
2530 2705 3.136626 AGTGTGGGTGAAGCTTTAGAACT 59.863 43.478 0.00 0.00 0.00 3.01
2531 2706 4.347000 AGTGTGGGTGAAGCTTTAGAACTA 59.653 41.667 0.00 0.00 0.00 2.24
2532 2707 5.061179 GTGTGGGTGAAGCTTTAGAACTAA 58.939 41.667 0.00 0.00 0.00 2.24
2533 2708 5.705905 GTGTGGGTGAAGCTTTAGAACTAAT 59.294 40.000 0.00 0.00 0.00 1.73
2534 2709 5.705441 TGTGGGTGAAGCTTTAGAACTAATG 59.295 40.000 0.00 0.00 0.00 1.90
2535 2710 5.123979 GTGGGTGAAGCTTTAGAACTAATGG 59.876 44.000 0.00 2.07 0.00 3.16
2536 2711 4.640647 GGGTGAAGCTTTAGAACTAATGGG 59.359 45.833 0.00 0.23 0.00 4.00
2537 2712 5.497474 GGTGAAGCTTTAGAACTAATGGGA 58.503 41.667 0.00 0.00 0.00 4.37
2538 2713 5.944007 GGTGAAGCTTTAGAACTAATGGGAA 59.056 40.000 0.00 0.00 0.00 3.97
2539 2714 6.433093 GGTGAAGCTTTAGAACTAATGGGAAA 59.567 38.462 0.00 0.00 0.00 3.13
2540 2715 7.039993 GGTGAAGCTTTAGAACTAATGGGAAAA 60.040 37.037 0.00 0.00 0.00 2.29
2541 2716 8.523658 GTGAAGCTTTAGAACTAATGGGAAAAT 58.476 33.333 0.00 0.00 0.00 1.82
2542 2717 9.747898 TGAAGCTTTAGAACTAATGGGAAAATA 57.252 29.630 0.00 0.00 0.00 1.40
2545 2720 8.674607 AGCTTTAGAACTAATGGGAAAATAACG 58.325 33.333 8.70 0.00 0.00 3.18
2546 2721 8.671028 GCTTTAGAACTAATGGGAAAATAACGA 58.329 33.333 0.00 0.00 0.00 3.85
2547 2722 9.983804 CTTTAGAACTAATGGGAAAATAACGAC 57.016 33.333 0.00 0.00 0.00 4.34
2548 2723 9.729281 TTTAGAACTAATGGGAAAATAACGACT 57.271 29.630 0.00 0.00 0.00 4.18
2552 2727 6.589135 ACTAATGGGAAAATAACGACTAGGG 58.411 40.000 0.00 0.00 0.00 3.53
2556 2731 4.186926 GGGAAAATAACGACTAGGGTGTC 58.813 47.826 0.00 0.00 0.00 3.67
2567 2742 2.628657 ACTAGGGTGTCGATTAGATGGC 59.371 50.000 0.00 0.00 0.00 4.40
2578 2753 3.001330 CGATTAGATGGCGACTGGAAAAC 59.999 47.826 0.00 0.00 0.00 2.43
2579 2754 2.396590 TAGATGGCGACTGGAAAACC 57.603 50.000 0.00 0.00 0.00 3.27
2580 2755 0.400213 AGATGGCGACTGGAAAACCA 59.600 50.000 0.00 0.00 34.28 3.67
2588 2763 2.437413 GACTGGAAAACCAGGGATGAC 58.563 52.381 18.47 2.17 41.67 3.06
2620 2795 2.926200 CAGTCAAGTGTTCCTATCGCAG 59.074 50.000 0.00 0.00 0.00 5.18
2622 2797 1.009829 CAAGTGTTCCTATCGCAGGC 58.990 55.000 0.00 0.00 45.10 4.85
2636 2811 1.799917 CGCAGGCTGCATGGTTATTTG 60.800 52.381 35.94 14.12 45.36 2.32
2649 2824 6.735694 GCATGGTTATTTGTCTCGGCATATTT 60.736 38.462 0.00 0.00 0.00 1.40
2713 2888 2.806818 GGCATGTGCTGAGATATGTGAG 59.193 50.000 4.84 0.00 41.70 3.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
12 13 1.641577 GGATGGCTTCAGTACACGTC 58.358 55.000 2.60 0.00 0.00 4.34
61 62 3.181416 ACCAGTTTGCCTACCCCATTTAA 60.181 43.478 0.00 0.00 0.00 1.52
69 70 0.400594 ACTCCACCAGTTTGCCTACC 59.599 55.000 0.00 0.00 26.56 3.18
81 82 1.648467 GCTTCAATGCCGACTCCACC 61.648 60.000 0.00 0.00 0.00 4.61
101 102 3.673484 CGCAAGCCCACCCAGTTG 61.673 66.667 0.00 0.00 0.00 3.16
107 108 0.033366 ATTTGAAACGCAAGCCCACC 59.967 50.000 0.00 0.00 45.62 4.61
109 110 1.410517 TGAATTTGAAACGCAAGCCCA 59.589 42.857 0.00 0.00 45.62 5.36
133 134 0.462937 TGAATTATCCCGCCCGTGTG 60.463 55.000 0.00 0.00 0.00 3.82
134 135 0.253610 TTGAATTATCCCGCCCGTGT 59.746 50.000 0.00 0.00 0.00 4.49
147 148 5.593502 ACATTGCCCATTTGTGTTTTGAATT 59.406 32.000 0.00 0.00 0.00 2.17
149 150 4.521146 ACATTGCCCATTTGTGTTTTGAA 58.479 34.783 0.00 0.00 0.00 2.69
150 151 4.148128 ACATTGCCCATTTGTGTTTTGA 57.852 36.364 0.00 0.00 0.00 2.69
152 153 4.897025 CAACATTGCCCATTTGTGTTTT 57.103 36.364 0.00 0.00 31.19 2.43
175 183 0.691078 CCTAGCTGCCCCTTCAGGTA 60.691 60.000 0.00 3.21 43.63 3.08
208 216 1.375098 GCTCTCATGCTGCAACTCCC 61.375 60.000 6.36 0.00 0.00 4.30
223 231 1.349357 GTGGGAAAGAACTGAGGCTCT 59.651 52.381 16.72 0.00 0.00 4.09
232 240 2.028020 AGGACTCATCGTGGGAAAGAAC 60.028 50.000 0.00 0.00 0.00 3.01
244 252 0.179124 GCGGTCACTGAGGACTCATC 60.179 60.000 2.00 0.00 39.13 2.92
246 254 0.037734 TAGCGGTCACTGAGGACTCA 59.962 55.000 1.61 1.61 37.91 3.41
249 257 0.171455 CACTAGCGGTCACTGAGGAC 59.829 60.000 0.00 0.00 37.06 3.85
288 296 2.244117 GAACCTGCATCGAGAGGCCA 62.244 60.000 5.01 0.00 37.30 5.36
291 299 1.938577 CAATGAACCTGCATCGAGAGG 59.061 52.381 6.41 6.41 35.26 3.69
301 309 4.082125 ACTAAGGAAAGGCAATGAACCTG 58.918 43.478 0.00 0.00 37.67 4.00
308 316 7.149202 TGGATGTATACTAAGGAAAGGCAAT 57.851 36.000 4.17 0.00 0.00 3.56
323 331 8.704668 TCAGCAGATTTCTAAGTTGGATGTATA 58.295 33.333 0.00 0.00 0.00 1.47
329 337 5.227569 TGTCAGCAGATTTCTAAGTTGGA 57.772 39.130 0.00 0.00 0.00 3.53
367 375 2.954318 GCTGCCTACATTTCATGGTCAT 59.046 45.455 0.00 0.00 33.60 3.06
369 377 1.331756 CGCTGCCTACATTTCATGGTC 59.668 52.381 0.00 0.00 33.60 4.02
373 381 2.408333 GCCGCTGCCTACATTTCAT 58.592 52.632 0.00 0.00 0.00 2.57
395 403 3.624777 CTGGTTAACTGATGCTTCCCAT 58.375 45.455 5.42 0.00 36.70 4.00
397 405 2.369394 CCTGGTTAACTGATGCTTCCC 58.631 52.381 5.42 0.00 0.00 3.97
429 437 1.226974 TCTCGCTTATCGCAGCCAC 60.227 57.895 0.00 0.00 39.08 5.01
431 439 0.528684 AAGTCTCGCTTATCGCAGCC 60.529 55.000 0.00 0.00 39.08 4.85
433 441 2.115595 CTGAAGTCTCGCTTATCGCAG 58.884 52.381 0.00 0.00 37.59 5.18
465 473 2.046507 GCCCACCTGCAGAGACAG 60.047 66.667 17.39 0.00 37.42 3.51
476 484 0.746659 GCTGATTTACCATGCCCACC 59.253 55.000 0.00 0.00 0.00 4.61
533 541 3.118775 ACCTGCTATGACTGCGAACATAA 60.119 43.478 0.00 0.00 0.00 1.90
535 543 1.208052 ACCTGCTATGACTGCGAACAT 59.792 47.619 0.00 0.00 0.00 2.71
548 556 4.224370 CCCCAGTTTAGAACTAACCTGCTA 59.776 45.833 11.75 0.00 40.46 3.49
560 568 5.607171 GGATATCTTCCTTCCCCAGTTTAGA 59.393 44.000 2.05 0.00 41.78 2.10
563 571 3.463704 GGGATATCTTCCTTCCCCAGTTT 59.536 47.826 2.05 0.00 44.75 2.66
600 608 1.133199 ACCCTTCAATCCCTTGTGCAA 60.133 47.619 0.00 0.00 33.87 4.08
601 609 0.482446 ACCCTTCAATCCCTTGTGCA 59.518 50.000 0.00 0.00 33.87 4.57
602 610 2.092323 GTACCCTTCAATCCCTTGTGC 58.908 52.381 0.00 0.00 33.87 4.57
603 611 2.723273 GGTACCCTTCAATCCCTTGTG 58.277 52.381 0.00 0.00 33.87 3.33
619 627 2.689983 CCCTTTTGATGCATCAGGGTAC 59.310 50.000 31.06 8.07 35.92 3.34
620 628 2.311542 ACCCTTTTGATGCATCAGGGTA 59.688 45.455 38.18 21.48 45.73 3.69
621 629 1.077663 ACCCTTTTGATGCATCAGGGT 59.922 47.619 35.74 35.74 43.96 4.34
622 630 1.856629 ACCCTTTTGATGCATCAGGG 58.143 50.000 34.73 34.73 42.48 4.45
623 631 2.159338 CGAACCCTTTTGATGCATCAGG 60.159 50.000 27.25 25.47 38.19 3.86
624 632 2.159338 CCGAACCCTTTTGATGCATCAG 60.159 50.000 27.25 18.39 38.19 2.90
625 633 1.818060 CCGAACCCTTTTGATGCATCA 59.182 47.619 25.42 25.42 34.44 3.07
626 634 1.134946 CCCGAACCCTTTTGATGCATC 59.865 52.381 20.14 20.14 0.00 3.91
627 635 1.185315 CCCGAACCCTTTTGATGCAT 58.815 50.000 0.00 0.00 0.00 3.96
628 636 0.897863 CCCCGAACCCTTTTGATGCA 60.898 55.000 0.00 0.00 0.00 3.96
629 637 0.610785 TCCCCGAACCCTTTTGATGC 60.611 55.000 0.00 0.00 0.00 3.91
630 638 1.463674 CTCCCCGAACCCTTTTGATG 58.536 55.000 0.00 0.00 0.00 3.07
631 639 0.323451 GCTCCCCGAACCCTTTTGAT 60.323 55.000 0.00 0.00 0.00 2.57
632 640 1.074248 GCTCCCCGAACCCTTTTGA 59.926 57.895 0.00 0.00 0.00 2.69
633 641 0.611896 ATGCTCCCCGAACCCTTTTG 60.612 55.000 0.00 0.00 0.00 2.44
634 642 0.611896 CATGCTCCCCGAACCCTTTT 60.612 55.000 0.00 0.00 0.00 2.27
635 643 1.000896 CATGCTCCCCGAACCCTTT 60.001 57.895 0.00 0.00 0.00 3.11
636 644 1.281925 ATCATGCTCCCCGAACCCTT 61.282 55.000 0.00 0.00 0.00 3.95
637 645 1.694169 ATCATGCTCCCCGAACCCT 60.694 57.895 0.00 0.00 0.00 4.34
638 646 1.227973 GATCATGCTCCCCGAACCC 60.228 63.158 0.00 0.00 0.00 4.11
639 647 1.227973 GGATCATGCTCCCCGAACC 60.228 63.158 4.09 0.00 0.00 3.62
640 648 4.464262 GGATCATGCTCCCCGAAC 57.536 61.111 4.09 0.00 0.00 3.95
646 654 2.976903 GCAGCGGGATCATGCTCC 60.977 66.667 7.07 7.07 40.03 4.70
649 657 3.962421 GCAGCAGCGGGATCATGC 61.962 66.667 0.00 0.00 40.29 4.06
659 667 3.060615 CCCCACTTGAGCAGCAGC 61.061 66.667 0.00 0.00 42.56 5.25
660 668 3.060615 GCCCCACTTGAGCAGCAG 61.061 66.667 0.00 0.00 0.00 4.24
661 669 3.573229 AGCCCCACTTGAGCAGCA 61.573 61.111 0.00 0.00 0.00 4.41
662 670 3.060615 CAGCCCCACTTGAGCAGC 61.061 66.667 0.00 0.00 0.00 5.25
663 671 2.360852 CCAGCCCCACTTGAGCAG 60.361 66.667 0.00 0.00 0.00 4.24
664 672 4.666253 GCCAGCCCCACTTGAGCA 62.666 66.667 0.00 0.00 0.00 4.26
674 682 4.424711 TTCATCCACCGCCAGCCC 62.425 66.667 0.00 0.00 0.00 5.19
675 683 2.825836 CTTCATCCACCGCCAGCC 60.826 66.667 0.00 0.00 0.00 4.85
676 684 2.825836 CCTTCATCCACCGCCAGC 60.826 66.667 0.00 0.00 0.00 4.85
677 685 2.825836 GCCTTCATCCACCGCCAG 60.826 66.667 0.00 0.00 0.00 4.85
678 686 4.776322 CGCCTTCATCCACCGCCA 62.776 66.667 0.00 0.00 0.00 5.69
679 687 4.778143 ACGCCTTCATCCACCGCC 62.778 66.667 0.00 0.00 0.00 6.13
680 688 3.499737 CACGCCTTCATCCACCGC 61.500 66.667 0.00 0.00 0.00 5.68
681 689 3.499737 GCACGCCTTCATCCACCG 61.500 66.667 0.00 0.00 0.00 4.94
682 690 2.359850 TGCACGCCTTCATCCACC 60.360 61.111 0.00 0.00 0.00 4.61
683 691 3.044059 GCTGCACGCCTTCATCCAC 62.044 63.158 0.00 0.00 0.00 4.02
684 692 2.747460 GCTGCACGCCTTCATCCA 60.747 61.111 0.00 0.00 0.00 3.41
685 693 2.437359 AGCTGCACGCCTTCATCC 60.437 61.111 1.02 0.00 40.39 3.51
686 694 0.740868 TACAGCTGCACGCCTTCATC 60.741 55.000 15.27 0.00 40.39 2.92
687 695 1.021390 GTACAGCTGCACGCCTTCAT 61.021 55.000 15.27 0.00 40.39 2.57
688 696 1.667830 GTACAGCTGCACGCCTTCA 60.668 57.895 15.27 0.00 40.39 3.02
689 697 0.951040 AAGTACAGCTGCACGCCTTC 60.951 55.000 15.27 0.00 40.39 3.46
690 698 0.320374 TAAGTACAGCTGCACGCCTT 59.680 50.000 15.27 10.87 40.39 4.35
691 699 0.389948 GTAAGTACAGCTGCACGCCT 60.390 55.000 15.27 4.16 40.39 5.52
692 700 1.359459 GGTAAGTACAGCTGCACGCC 61.359 60.000 15.27 12.52 40.39 5.68
693 701 0.669318 TGGTAAGTACAGCTGCACGC 60.669 55.000 15.27 7.18 39.57 5.34
694 702 1.067846 TCTGGTAAGTACAGCTGCACG 60.068 52.381 15.27 0.00 35.94 5.34
695 703 2.743636 TCTGGTAAGTACAGCTGCAC 57.256 50.000 15.27 12.04 35.94 4.57
696 704 2.831526 TCATCTGGTAAGTACAGCTGCA 59.168 45.455 15.27 0.00 33.40 4.41
697 705 3.526931 TCATCTGGTAAGTACAGCTGC 57.473 47.619 15.27 0.00 33.40 5.25
698 706 5.046529 GTCATCATCTGGTAAGTACAGCTG 58.953 45.833 13.48 13.48 35.94 4.24
699 707 4.202060 CGTCATCATCTGGTAAGTACAGCT 60.202 45.833 0.00 0.00 35.94 4.24
700 708 4.045104 CGTCATCATCTGGTAAGTACAGC 58.955 47.826 0.00 0.00 35.94 4.40
701 709 5.274718 GTCGTCATCATCTGGTAAGTACAG 58.725 45.833 0.00 0.00 37.30 2.74
702 710 4.201881 CGTCGTCATCATCTGGTAAGTACA 60.202 45.833 0.00 0.00 0.00 2.90
703 711 4.201891 ACGTCGTCATCATCTGGTAAGTAC 60.202 45.833 0.00 0.00 0.00 2.73
704 712 3.943381 ACGTCGTCATCATCTGGTAAGTA 59.057 43.478 0.00 0.00 0.00 2.24
705 713 2.753452 ACGTCGTCATCATCTGGTAAGT 59.247 45.455 0.00 0.00 0.00 2.24
706 714 3.108881 CACGTCGTCATCATCTGGTAAG 58.891 50.000 0.00 0.00 0.00 2.34
707 715 2.159296 CCACGTCGTCATCATCTGGTAA 60.159 50.000 0.00 0.00 0.00 2.85
708 716 1.404035 CCACGTCGTCATCATCTGGTA 59.596 52.381 0.00 0.00 0.00 3.25
709 717 0.173481 CCACGTCGTCATCATCTGGT 59.827 55.000 0.00 0.00 0.00 4.00
710 718 0.455815 TCCACGTCGTCATCATCTGG 59.544 55.000 0.00 0.00 0.00 3.86
711 719 2.159379 TCTTCCACGTCGTCATCATCTG 60.159 50.000 0.00 0.00 0.00 2.90
712 720 2.092323 TCTTCCACGTCGTCATCATCT 58.908 47.619 0.00 0.00 0.00 2.90
713 721 2.097629 TCTCTTCCACGTCGTCATCATC 59.902 50.000 0.00 0.00 0.00 2.92
714 722 2.092323 TCTCTTCCACGTCGTCATCAT 58.908 47.619 0.00 0.00 0.00 2.45
715 723 1.468914 CTCTCTTCCACGTCGTCATCA 59.531 52.381 0.00 0.00 0.00 3.07
716 724 1.795889 GCTCTCTTCCACGTCGTCATC 60.796 57.143 0.00 0.00 0.00 2.92
717 725 0.171455 GCTCTCTTCCACGTCGTCAT 59.829 55.000 0.00 0.00 0.00 3.06
718 726 1.170290 TGCTCTCTTCCACGTCGTCA 61.170 55.000 0.00 0.00 0.00 4.35
719 727 0.729816 GTGCTCTCTTCCACGTCGTC 60.730 60.000 0.00 0.00 0.00 4.20
720 728 1.173444 AGTGCTCTCTTCCACGTCGT 61.173 55.000 0.00 0.00 37.07 4.34
721 729 0.730834 CAGTGCTCTCTTCCACGTCG 60.731 60.000 0.00 0.00 37.07 5.12
722 730 0.598562 TCAGTGCTCTCTTCCACGTC 59.401 55.000 0.00 0.00 37.07 4.34
723 731 0.600557 CTCAGTGCTCTCTTCCACGT 59.399 55.000 0.00 0.00 37.07 4.49
724 732 0.735632 GCTCAGTGCTCTCTTCCACG 60.736 60.000 0.00 0.00 38.95 4.94
725 733 0.319728 TGCTCAGTGCTCTCTTCCAC 59.680 55.000 0.00 0.00 43.37 4.02
726 734 0.319728 GTGCTCAGTGCTCTCTTCCA 59.680 55.000 0.00 0.00 43.37 3.53
727 735 0.319728 TGTGCTCAGTGCTCTCTTCC 59.680 55.000 0.00 0.00 43.37 3.46
728 736 2.383368 ATGTGCTCAGTGCTCTCTTC 57.617 50.000 0.00 0.00 43.37 2.87
729 737 2.424557 CAATGTGCTCAGTGCTCTCTT 58.575 47.619 3.05 0.00 43.37 2.85
730 738 2.096220 CAATGTGCTCAGTGCTCTCT 57.904 50.000 3.05 0.00 43.37 3.10
736 744 1.774639 GTTTGGCAATGTGCTCAGTG 58.225 50.000 11.58 11.58 44.28 3.66
737 745 0.311790 CGTTTGGCAATGTGCTCAGT 59.688 50.000 0.00 0.00 44.28 3.41
738 746 1.005294 GCGTTTGGCAATGTGCTCAG 61.005 55.000 0.00 0.00 44.28 3.35
739 747 1.007502 GCGTTTGGCAATGTGCTCA 60.008 52.632 0.00 0.00 44.28 4.26
740 748 3.846754 GCGTTTGGCAATGTGCTC 58.153 55.556 0.00 0.00 44.28 4.26
749 757 0.944386 TTCAGTCTTGAGCGTTTGGC 59.056 50.000 0.00 0.00 44.05 4.52
750 758 2.670401 GTTCAGTCTTGAGCGTTTGG 57.330 50.000 0.00 0.00 34.15 3.28
756 764 0.319900 TCAGGCGTTCAGTCTTGAGC 60.320 55.000 0.00 0.00 34.15 4.26
757 765 2.376808 ATCAGGCGTTCAGTCTTGAG 57.623 50.000 0.00 0.00 34.15 3.02
758 766 2.839486 AATCAGGCGTTCAGTCTTGA 57.161 45.000 0.00 0.00 28.06 3.02
759 767 3.997021 AGTAAATCAGGCGTTCAGTCTTG 59.003 43.478 0.00 0.00 28.06 3.02
760 768 4.021016 AGAGTAAATCAGGCGTTCAGTCTT 60.021 41.667 0.00 0.00 28.06 3.01
761 769 3.511934 AGAGTAAATCAGGCGTTCAGTCT 59.488 43.478 0.00 0.00 33.14 3.24
762 770 3.851098 AGAGTAAATCAGGCGTTCAGTC 58.149 45.455 0.00 0.00 0.00 3.51
763 771 3.963428 AGAGTAAATCAGGCGTTCAGT 57.037 42.857 0.00 0.00 0.00 3.41
764 772 3.997021 ACAAGAGTAAATCAGGCGTTCAG 59.003 43.478 0.00 0.00 0.00 3.02
765 773 3.745975 CACAAGAGTAAATCAGGCGTTCA 59.254 43.478 0.00 0.00 0.00 3.18
766 774 3.424962 GCACAAGAGTAAATCAGGCGTTC 60.425 47.826 0.00 0.00 0.00 3.95
767 775 2.484264 GCACAAGAGTAAATCAGGCGTT 59.516 45.455 0.00 0.00 0.00 4.84
768 776 2.076863 GCACAAGAGTAAATCAGGCGT 58.923 47.619 0.00 0.00 0.00 5.68
769 777 2.350522 AGCACAAGAGTAAATCAGGCG 58.649 47.619 0.00 0.00 0.00 5.52
770 778 4.938226 ACTTAGCACAAGAGTAAATCAGGC 59.062 41.667 5.20 0.00 0.00 4.85
771 779 7.548097 TCTACTTAGCACAAGAGTAAATCAGG 58.452 38.462 5.20 0.00 0.00 3.86
772 780 8.462811 TCTCTACTTAGCACAAGAGTAAATCAG 58.537 37.037 5.20 0.00 37.37 2.90
773 781 8.244802 GTCTCTACTTAGCACAAGAGTAAATCA 58.755 37.037 5.20 0.00 37.37 2.57
774 782 8.244802 TGTCTCTACTTAGCACAAGAGTAAATC 58.755 37.037 5.20 0.00 37.37 2.17
775 783 8.123639 TGTCTCTACTTAGCACAAGAGTAAAT 57.876 34.615 5.20 0.00 37.37 1.40
776 784 7.447545 TCTGTCTCTACTTAGCACAAGAGTAAA 59.552 37.037 5.20 0.00 37.37 2.01
777 785 6.940867 TCTGTCTCTACTTAGCACAAGAGTAA 59.059 38.462 5.20 0.00 37.37 2.24
778 786 6.473758 TCTGTCTCTACTTAGCACAAGAGTA 58.526 40.000 5.20 0.00 37.37 2.59
779 787 5.317808 TCTGTCTCTACTTAGCACAAGAGT 58.682 41.667 5.20 0.00 37.37 3.24
780 788 5.414454 ACTCTGTCTCTACTTAGCACAAGAG 59.586 44.000 5.20 0.00 37.42 2.85
781 789 5.317808 ACTCTGTCTCTACTTAGCACAAGA 58.682 41.667 5.20 0.00 0.00 3.02
782 790 5.637006 ACTCTGTCTCTACTTAGCACAAG 57.363 43.478 0.00 0.00 0.00 3.16
783 791 5.648526 CCTACTCTGTCTCTACTTAGCACAA 59.351 44.000 0.00 0.00 0.00 3.33
784 792 5.186942 CCTACTCTGTCTCTACTTAGCACA 58.813 45.833 0.00 0.00 0.00 4.57
785 793 4.035909 GCCTACTCTGTCTCTACTTAGCAC 59.964 50.000 0.00 0.00 0.00 4.40
786 794 4.200874 GCCTACTCTGTCTCTACTTAGCA 58.799 47.826 0.00 0.00 0.00 3.49
787 795 4.200874 TGCCTACTCTGTCTCTACTTAGC 58.799 47.826 0.00 0.00 0.00 3.09
788 796 6.544197 TCATTGCCTACTCTGTCTCTACTTAG 59.456 42.308 0.00 0.00 0.00 2.18
789 797 6.424032 TCATTGCCTACTCTGTCTCTACTTA 58.576 40.000 0.00 0.00 0.00 2.24
790 798 5.265191 TCATTGCCTACTCTGTCTCTACTT 58.735 41.667 0.00 0.00 0.00 2.24
791 799 4.861196 TCATTGCCTACTCTGTCTCTACT 58.139 43.478 0.00 0.00 0.00 2.57
792 800 5.527951 CATCATTGCCTACTCTGTCTCTAC 58.472 45.833 0.00 0.00 0.00 2.59
793 801 4.038522 GCATCATTGCCTACTCTGTCTCTA 59.961 45.833 0.00 0.00 43.38 2.43
794 802 3.181467 GCATCATTGCCTACTCTGTCTCT 60.181 47.826 0.00 0.00 43.38 3.10
795 803 3.129871 GCATCATTGCCTACTCTGTCTC 58.870 50.000 0.00 0.00 43.38 3.36
796 804 3.191078 GCATCATTGCCTACTCTGTCT 57.809 47.619 0.00 0.00 43.38 3.41
808 816 4.583489 AGATAGAAGGCAAAGGCATCATTG 59.417 41.667 0.00 0.00 43.71 2.82
809 817 4.583489 CAGATAGAAGGCAAAGGCATCATT 59.417 41.667 0.00 0.00 43.71 2.57
810 818 4.141321 TCAGATAGAAGGCAAAGGCATCAT 60.141 41.667 0.00 0.00 43.71 2.45
811 819 3.200605 TCAGATAGAAGGCAAAGGCATCA 59.799 43.478 0.00 0.00 43.71 3.07
812 820 3.563390 GTCAGATAGAAGGCAAAGGCATC 59.437 47.826 0.00 0.00 43.71 3.91
813 821 3.201708 AGTCAGATAGAAGGCAAAGGCAT 59.798 43.478 0.00 0.00 43.71 4.40
814 822 2.573462 AGTCAGATAGAAGGCAAAGGCA 59.427 45.455 0.00 0.00 43.71 4.75
815 823 3.274095 AGTCAGATAGAAGGCAAAGGC 57.726 47.619 0.00 0.00 40.13 4.35
816 824 4.874966 CAGAAGTCAGATAGAAGGCAAAGG 59.125 45.833 0.00 0.00 0.00 3.11
817 825 5.486526 ACAGAAGTCAGATAGAAGGCAAAG 58.513 41.667 0.00 0.00 0.00 2.77
818 826 5.489792 ACAGAAGTCAGATAGAAGGCAAA 57.510 39.130 0.00 0.00 0.00 3.68
819 827 5.717178 AGTACAGAAGTCAGATAGAAGGCAA 59.283 40.000 0.00 0.00 0.00 4.52
820 828 5.126222 CAGTACAGAAGTCAGATAGAAGGCA 59.874 44.000 0.00 0.00 0.00 4.75
821 829 5.358442 TCAGTACAGAAGTCAGATAGAAGGC 59.642 44.000 0.00 0.00 0.00 4.35
822 830 7.397892 TTCAGTACAGAAGTCAGATAGAAGG 57.602 40.000 0.00 0.00 0.00 3.46
830 838 9.227490 CGACTAATTATTCAGTACAGAAGTCAG 57.773 37.037 6.84 2.69 0.00 3.51
831 839 8.737175 ACGACTAATTATTCAGTACAGAAGTCA 58.263 33.333 6.84 0.00 0.00 3.41
832 840 9.011407 CACGACTAATTATTCAGTACAGAAGTC 57.989 37.037 6.84 6.24 0.00 3.01
833 841 8.521176 ACACGACTAATTATTCAGTACAGAAGT 58.479 33.333 6.84 0.00 0.00 3.01
834 842 8.799091 CACACGACTAATTATTCAGTACAGAAG 58.201 37.037 6.84 0.00 0.00 2.85
835 843 8.301720 ACACACGACTAATTATTCAGTACAGAA 58.698 33.333 2.93 2.93 0.00 3.02
836 844 7.823665 ACACACGACTAATTATTCAGTACAGA 58.176 34.615 0.00 0.00 0.00 3.41
837 845 9.007252 GTACACACGACTAATTATTCAGTACAG 57.993 37.037 13.68 0.00 0.00 2.74
838 846 8.733458 AGTACACACGACTAATTATTCAGTACA 58.267 33.333 17.24 3.27 31.87 2.90
841 849 9.731819 CATAGTACACACGACTAATTATTCAGT 57.268 33.333 0.00 0.00 33.24 3.41
842 850 9.731819 ACATAGTACACACGACTAATTATTCAG 57.268 33.333 0.00 0.00 33.24 3.02
848 856 9.512435 GTTGATACATAGTACACACGACTAATT 57.488 33.333 0.00 0.00 33.24 1.40
849 857 8.900781 AGTTGATACATAGTACACACGACTAAT 58.099 33.333 0.00 0.00 33.24 1.73
850 858 8.272545 AGTTGATACATAGTACACACGACTAA 57.727 34.615 0.00 0.00 33.24 2.24
851 859 7.854557 AGTTGATACATAGTACACACGACTA 57.145 36.000 0.00 0.00 34.01 2.59
852 860 6.754702 AGTTGATACATAGTACACACGACT 57.245 37.500 0.00 0.00 0.00 4.18
853 861 7.913423 TCTAGTTGATACATAGTACACACGAC 58.087 38.462 0.00 0.00 0.00 4.34
854 862 8.672823 ATCTAGTTGATACATAGTACACACGA 57.327 34.615 0.00 0.00 32.79 4.35
855 863 8.557029 TGATCTAGTTGATACATAGTACACACG 58.443 37.037 0.00 0.00 35.14 4.49
856 864 9.885934 CTGATCTAGTTGATACATAGTACACAC 57.114 37.037 0.00 0.00 35.14 3.82
857 865 8.568794 GCTGATCTAGTTGATACATAGTACACA 58.431 37.037 0.00 0.00 35.14 3.72
858 866 8.568794 TGCTGATCTAGTTGATACATAGTACAC 58.431 37.037 0.00 0.00 35.14 2.90
859 867 8.691661 TGCTGATCTAGTTGATACATAGTACA 57.308 34.615 0.00 0.00 35.14 2.90
860 868 8.788806 ACTGCTGATCTAGTTGATACATAGTAC 58.211 37.037 0.00 0.00 35.14 2.73
861 869 8.926092 ACTGCTGATCTAGTTGATACATAGTA 57.074 34.615 0.00 0.00 35.14 1.82
862 870 7.831691 ACTGCTGATCTAGTTGATACATAGT 57.168 36.000 0.00 0.00 35.14 2.12
863 871 9.008965 ACTACTGCTGATCTAGTTGATACATAG 57.991 37.037 0.00 0.00 35.14 2.23
864 872 8.926092 ACTACTGCTGATCTAGTTGATACATA 57.074 34.615 0.00 0.00 35.14 2.29
865 873 7.831691 ACTACTGCTGATCTAGTTGATACAT 57.168 36.000 0.00 0.00 35.14 2.29
866 874 7.646548 AACTACTGCTGATCTAGTTGATACA 57.353 36.000 0.00 0.00 35.14 2.29
867 875 9.058174 TCTAACTACTGCTGATCTAGTTGATAC 57.942 37.037 12.31 0.00 35.14 2.24
868 876 9.278978 CTCTAACTACTGCTGATCTAGTTGATA 57.721 37.037 12.31 5.94 35.14 2.15
869 877 7.255451 GCTCTAACTACTGCTGATCTAGTTGAT 60.255 40.741 12.31 5.29 38.27 2.57
870 878 6.038825 GCTCTAACTACTGCTGATCTAGTTGA 59.961 42.308 12.31 8.21 33.66 3.18
871 879 6.205784 GCTCTAACTACTGCTGATCTAGTTG 58.794 44.000 12.31 8.90 33.66 3.16
872 880 5.008217 CGCTCTAACTACTGCTGATCTAGTT 59.992 44.000 8.76 8.76 35.40 2.24
873 881 4.513692 CGCTCTAACTACTGCTGATCTAGT 59.486 45.833 0.00 0.00 0.00 2.57
874 882 4.513692 ACGCTCTAACTACTGCTGATCTAG 59.486 45.833 0.00 0.00 0.00 2.43
875 883 4.452825 ACGCTCTAACTACTGCTGATCTA 58.547 43.478 0.00 0.00 0.00 1.98
876 884 3.283751 ACGCTCTAACTACTGCTGATCT 58.716 45.455 0.00 0.00 0.00 2.75
877 885 3.701532 ACGCTCTAACTACTGCTGATC 57.298 47.619 0.00 0.00 0.00 2.92
878 886 4.200874 ACTACGCTCTAACTACTGCTGAT 58.799 43.478 0.00 0.00 0.00 2.90
879 887 3.607741 ACTACGCTCTAACTACTGCTGA 58.392 45.455 0.00 0.00 0.00 4.26
880 888 4.099120 CAACTACGCTCTAACTACTGCTG 58.901 47.826 0.00 0.00 0.00 4.41
881 889 3.757493 ACAACTACGCTCTAACTACTGCT 59.243 43.478 0.00 0.00 0.00 4.24
882 890 4.094090 ACAACTACGCTCTAACTACTGC 57.906 45.455 0.00 0.00 0.00 4.40
883 891 6.147581 TCAAACAACTACGCTCTAACTACTG 58.852 40.000 0.00 0.00 0.00 2.74
884 892 6.323203 TCAAACAACTACGCTCTAACTACT 57.677 37.500 0.00 0.00 0.00 2.57
885 893 6.399775 GCTTCAAACAACTACGCTCTAACTAC 60.400 42.308 0.00 0.00 0.00 2.73
886 894 5.632347 GCTTCAAACAACTACGCTCTAACTA 59.368 40.000 0.00 0.00 0.00 2.24
887 895 4.448060 GCTTCAAACAACTACGCTCTAACT 59.552 41.667 0.00 0.00 0.00 2.24
888 896 4.377124 GGCTTCAAACAACTACGCTCTAAC 60.377 45.833 0.00 0.00 0.00 2.34
889 897 3.744426 GGCTTCAAACAACTACGCTCTAA 59.256 43.478 0.00 0.00 0.00 2.10
890 898 3.243941 TGGCTTCAAACAACTACGCTCTA 60.244 43.478 0.00 0.00 0.00 2.43
891 899 2.143925 GGCTTCAAACAACTACGCTCT 58.856 47.619 0.00 0.00 0.00 4.09
892 900 1.871039 TGGCTTCAAACAACTACGCTC 59.129 47.619 0.00 0.00 0.00 5.03
893 901 1.961793 TGGCTTCAAACAACTACGCT 58.038 45.000 0.00 0.00 0.00 5.07
894 902 2.032924 ACTTGGCTTCAAACAACTACGC 59.967 45.455 0.00 0.00 0.00 4.42
895 903 3.963383 ACTTGGCTTCAAACAACTACG 57.037 42.857 0.00 0.00 0.00 3.51
896 904 5.744666 TGTACTTGGCTTCAAACAACTAC 57.255 39.130 0.00 0.00 0.00 2.73
897 905 6.376018 AGTTTGTACTTGGCTTCAAACAACTA 59.624 34.615 17.53 0.00 46.52 2.24
898 906 5.185056 AGTTTGTACTTGGCTTCAAACAACT 59.815 36.000 17.53 5.04 46.52 3.16
899 907 5.407502 AGTTTGTACTTGGCTTCAAACAAC 58.592 37.500 17.53 3.36 46.52 3.32
900 908 5.652994 AGTTTGTACTTGGCTTCAAACAA 57.347 34.783 17.53 7.29 46.52 2.83
901 909 5.417580 AGAAGTTTGTACTTGGCTTCAAACA 59.582 36.000 17.53 2.77 46.52 2.83
902 910 5.743872 CAGAAGTTTGTACTTGGCTTCAAAC 59.256 40.000 16.25 10.36 44.51 2.93
903 911 5.417580 ACAGAAGTTTGTACTTGGCTTCAAA 59.582 36.000 16.25 0.00 44.51 2.69
904 912 4.947388 ACAGAAGTTTGTACTTGGCTTCAA 59.053 37.500 16.25 0.00 44.51 2.69
905 913 4.523083 ACAGAAGTTTGTACTTGGCTTCA 58.477 39.130 16.25 0.00 44.51 3.02
906 914 5.986936 GTACAGAAGTTTGTACTTGGCTTC 58.013 41.667 15.34 3.56 46.25 3.86
916 924 8.135529 GGCATTTCTTTAAGTACAGAAGTTTGT 58.864 33.333 0.00 0.00 30.68 2.83
917 925 8.352942 AGGCATTTCTTTAAGTACAGAAGTTTG 58.647 33.333 0.00 0.00 30.68 2.93
918 926 8.465273 AGGCATTTCTTTAAGTACAGAAGTTT 57.535 30.769 0.00 0.00 30.68 2.66
919 927 7.939588 AGAGGCATTTCTTTAAGTACAGAAGTT 59.060 33.333 0.00 0.00 30.68 2.66
920 928 7.389053 CAGAGGCATTTCTTTAAGTACAGAAGT 59.611 37.037 0.00 0.00 30.68 3.01
921 929 7.625185 GCAGAGGCATTTCTTTAAGTACAGAAG 60.625 40.741 0.00 0.00 40.72 2.85
922 930 6.149474 GCAGAGGCATTTCTTTAAGTACAGAA 59.851 38.462 0.00 0.00 40.72 3.02
923 931 5.643777 GCAGAGGCATTTCTTTAAGTACAGA 59.356 40.000 0.00 0.00 40.72 3.41
924 932 5.163713 GGCAGAGGCATTTCTTTAAGTACAG 60.164 44.000 0.00 0.00 43.71 2.74
925 933 4.700213 GGCAGAGGCATTTCTTTAAGTACA 59.300 41.667 0.00 0.00 43.71 2.90
926 934 4.201822 CGGCAGAGGCATTTCTTTAAGTAC 60.202 45.833 0.00 0.00 43.71 2.73
927 935 3.938963 CGGCAGAGGCATTTCTTTAAGTA 59.061 43.478 0.00 0.00 43.71 2.24
928 936 2.749621 CGGCAGAGGCATTTCTTTAAGT 59.250 45.455 0.00 0.00 43.71 2.24
929 937 2.749621 ACGGCAGAGGCATTTCTTTAAG 59.250 45.455 0.00 0.00 43.71 1.85
930 938 2.790433 ACGGCAGAGGCATTTCTTTAA 58.210 42.857 0.00 0.00 43.71 1.52
931 939 2.489938 ACGGCAGAGGCATTTCTTTA 57.510 45.000 0.00 0.00 43.71 1.85
932 940 2.489938 TACGGCAGAGGCATTTCTTT 57.510 45.000 0.00 0.00 43.71 2.52
933 941 2.092968 TCATACGGCAGAGGCATTTCTT 60.093 45.455 0.00 0.00 43.71 2.52
934 942 1.486310 TCATACGGCAGAGGCATTTCT 59.514 47.619 0.00 0.00 43.71 2.52
935 943 1.599542 GTCATACGGCAGAGGCATTTC 59.400 52.381 0.00 0.00 43.71 2.17
936 944 1.210478 AGTCATACGGCAGAGGCATTT 59.790 47.619 0.00 0.00 43.71 2.32
937 945 0.833287 AGTCATACGGCAGAGGCATT 59.167 50.000 0.00 0.00 43.71 3.56
938 946 0.390860 GAGTCATACGGCAGAGGCAT 59.609 55.000 0.00 0.00 43.71 4.40
939 947 0.684479 AGAGTCATACGGCAGAGGCA 60.684 55.000 0.00 0.00 43.71 4.75
940 948 0.461961 AAGAGTCATACGGCAGAGGC 59.538 55.000 0.00 0.00 40.13 4.70
941 949 1.478510 ACAAGAGTCATACGGCAGAGG 59.521 52.381 0.00 0.00 0.00 3.69
942 950 2.949451 ACAAGAGTCATACGGCAGAG 57.051 50.000 0.00 0.00 0.00 3.35
943 951 6.650427 ATAATACAAGAGTCATACGGCAGA 57.350 37.500 0.00 0.00 0.00 4.26
944 952 7.715265 AAATAATACAAGAGTCATACGGCAG 57.285 36.000 0.00 0.00 0.00 4.85
945 953 9.772973 AATAAATAATACAAGAGTCATACGGCA 57.227 29.630 0.00 0.00 0.00 5.69
967 975 9.997482 GCGATTAATCTCAAACCAACTTAATAA 57.003 29.630 13.45 0.00 0.00 1.40
968 976 8.332464 CGCGATTAATCTCAAACCAACTTAATA 58.668 33.333 13.45 0.00 0.00 0.98
969 977 7.148306 ACGCGATTAATCTCAAACCAACTTAAT 60.148 33.333 15.93 0.00 0.00 1.40
970 978 6.148150 ACGCGATTAATCTCAAACCAACTTAA 59.852 34.615 15.93 0.00 0.00 1.85
971 979 5.640357 ACGCGATTAATCTCAAACCAACTTA 59.360 36.000 15.93 0.00 0.00 2.24
972 980 4.454504 ACGCGATTAATCTCAAACCAACTT 59.545 37.500 15.93 0.00 0.00 2.66
973 981 4.000988 ACGCGATTAATCTCAAACCAACT 58.999 39.130 15.93 0.00 0.00 3.16
974 982 4.088648 CACGCGATTAATCTCAAACCAAC 58.911 43.478 15.93 0.00 0.00 3.77
975 983 3.997681 TCACGCGATTAATCTCAAACCAA 59.002 39.130 15.93 0.00 0.00 3.67
976 984 3.591023 TCACGCGATTAATCTCAAACCA 58.409 40.909 15.93 0.00 0.00 3.67
977 985 3.544244 GCTCACGCGATTAATCTCAAACC 60.544 47.826 15.93 0.00 0.00 3.27
978 986 3.062099 TGCTCACGCGATTAATCTCAAAC 59.938 43.478 15.93 0.00 39.65 2.93
979 987 3.258228 TGCTCACGCGATTAATCTCAAA 58.742 40.909 15.93 0.00 39.65 2.69
980 988 2.887337 TGCTCACGCGATTAATCTCAA 58.113 42.857 15.93 0.00 39.65 3.02
981 989 2.577449 TGCTCACGCGATTAATCTCA 57.423 45.000 15.93 0.00 39.65 3.27
982 990 3.052745 TCATGCTCACGCGATTAATCTC 58.947 45.455 15.93 4.64 39.65 2.75
983 991 3.097877 TCATGCTCACGCGATTAATCT 57.902 42.857 15.93 0.00 39.65 2.40
984 992 3.729684 CATCATGCTCACGCGATTAATC 58.270 45.455 15.93 5.30 39.65 1.75
985 993 2.096069 GCATCATGCTCACGCGATTAAT 60.096 45.455 15.93 0.00 40.96 1.40
986 994 1.261354 GCATCATGCTCACGCGATTAA 59.739 47.619 15.93 0.00 40.96 1.40
987 995 0.861185 GCATCATGCTCACGCGATTA 59.139 50.000 15.93 0.00 40.96 1.75
988 996 1.091197 TGCATCATGCTCACGCGATT 61.091 50.000 15.93 0.00 45.31 3.34
989 997 1.496403 CTGCATCATGCTCACGCGAT 61.496 55.000 15.93 0.00 45.31 4.58
990 998 2.125592 TGCATCATGCTCACGCGA 60.126 55.556 15.93 0.00 45.31 5.87
991 999 2.323447 CTGCATCATGCTCACGCG 59.677 61.111 11.84 3.53 45.31 6.01
992 1000 1.989966 AAGCTGCATCATGCTCACGC 61.990 55.000 11.84 8.28 45.31 5.34
993 1001 0.248094 CAAGCTGCATCATGCTCACG 60.248 55.000 11.84 0.00 45.31 4.35
994 1002 0.525668 GCAAGCTGCATCATGCTCAC 60.526 55.000 11.84 0.00 45.31 3.51
995 1003 1.807226 GCAAGCTGCATCATGCTCA 59.193 52.632 11.84 0.00 45.31 4.26
996 1004 4.711980 GCAAGCTGCATCATGCTC 57.288 55.556 11.84 2.66 45.31 4.26
1094 1102 4.394729 GGTTGATACCTTCTTTGTCCACA 58.605 43.478 0.00 0.00 41.53 4.17
1156 1172 3.457234 TCATGTATGAACATCTGCGGAC 58.543 45.455 0.00 0.00 44.70 4.79
1420 1440 1.135094 CCTGAGCAGGGATGTACCAT 58.865 55.000 8.69 0.00 44.87 3.55
1536 1587 7.498900 ACATCAAATCAGTCAGACTGTTAAACA 59.501 33.333 26.65 9.79 46.03 2.83
1572 1653 1.370609 CAGCTGTCCTCTCTGCATTG 58.629 55.000 5.25 0.00 35.31 2.82
1613 1696 7.733047 TGAAGATATAGGCCAGTGTAATTCCTA 59.267 37.037 5.01 0.00 34.31 2.94
1702 1833 2.784380 GCACGCTCGACTAGATGTTTAG 59.216 50.000 0.00 0.00 0.00 1.85
1709 1840 1.676746 ATTAGGCACGCTCGACTAGA 58.323 50.000 0.00 0.00 0.00 2.43
1720 1851 7.483307 ACATAATGAACATGACAATTAGGCAC 58.517 34.615 0.00 0.00 38.79 5.01
1840 1978 5.320277 AGCTTTCTAGAATGGCAAGACTTT 58.680 37.500 23.63 7.05 0.00 2.66
1846 1984 5.804639 TCTTGTAGCTTTCTAGAATGGCAA 58.195 37.500 23.63 15.55 29.19 4.52
1859 1997 1.137872 CGCCCTCTCATCTTGTAGCTT 59.862 52.381 0.00 0.00 0.00 3.74
1905 2043 9.050601 CCTCATATTCAAACAGGATTCTTACTC 57.949 37.037 0.00 0.00 0.00 2.59
1906 2044 8.772250 TCCTCATATTCAAACAGGATTCTTACT 58.228 33.333 0.00 0.00 0.00 2.24
1908 2046 8.548025 TGTCCTCATATTCAAACAGGATTCTTA 58.452 33.333 0.00 0.00 35.69 2.10
1930 2069 3.608474 GCAACTAACATTCACGGTTGTCC 60.608 47.826 0.00 0.00 39.28 4.02
1961 2100 3.681593 ACCATTACCACACCACATACAC 58.318 45.455 0.00 0.00 0.00 2.90
1985 2124 1.303317 ATGGGCTGGTCAACCGTTC 60.303 57.895 0.00 0.00 39.43 3.95
2001 2140 5.745294 CACCAACTTGTCTTCAGTTTTCATG 59.255 40.000 0.00 0.00 0.00 3.07
2018 2157 2.159382 CAACCTTTATCGGCACCAACT 58.841 47.619 0.00 0.00 0.00 3.16
2070 2245 8.951954 ACGCGATTCATCTAGTAATAACTTAG 57.048 34.615 15.93 0.00 37.15 2.18
2082 2257 6.322491 CAATCCTACATACGCGATTCATCTA 58.678 40.000 15.93 0.00 0.00 1.98
2114 2289 1.192146 TTCTAGTGCCGGGCAGAAGT 61.192 55.000 24.58 10.09 40.08 3.01
2115 2290 0.460987 CTTCTAGTGCCGGGCAGAAG 60.461 60.000 25.64 25.64 40.08 2.85
2117 2292 1.304962 TCTTCTAGTGCCGGGCAGA 60.305 57.895 24.58 13.96 40.08 4.26
2120 2295 1.153549 CAGTCTTCTAGTGCCGGGC 60.154 63.158 13.32 13.32 0.00 6.13
2152 2327 6.170675 AGCTAAATTGTGTGAATTCTCGAC 57.829 37.500 7.05 5.32 0.00 4.20
2180 2355 1.133606 ACACACCACTTTAGTTGGGGG 60.134 52.381 0.00 0.00 0.00 5.40
2218 2393 4.959839 TGAACTAGTACATGGCATACAGGA 59.040 41.667 0.00 0.00 34.35 3.86
2220 2395 5.235186 GCTTGAACTAGTACATGGCATACAG 59.765 44.000 0.00 0.00 0.00 2.74
2244 2419 6.200665 CACATAAATGTCACAAACAGGTTTGG 59.799 38.462 24.06 15.07 45.14 3.28
2252 2427 7.639039 TGTCTTCTCACATAAATGTCACAAAC 58.361 34.615 0.00 0.00 39.39 2.93
2289 2464 7.225931 ACAATTACGTCTTACACAATGAACAGT 59.774 33.333 0.00 0.00 0.00 3.55
2312 2487 6.263392 TCAAAATTAATTGTCGGAGTCCACAA 59.737 34.615 21.67 21.67 36.94 3.33
2332 2507 4.400884 AGCACACAACAGTATGGTTCAAAA 59.599 37.500 0.00 0.00 43.62 2.44
2341 2516 5.248640 AGAAATGCTAGCACACAACAGTAT 58.751 37.500 22.07 0.00 0.00 2.12
2360 2535 5.218885 CGCACAAACCAAACATCATAGAAA 58.781 37.500 0.00 0.00 0.00 2.52
2365 2540 4.576216 TTACGCACAAACCAAACATCAT 57.424 36.364 0.00 0.00 0.00 2.45
2376 2551 7.661127 ACTACATAATCAGTTTACGCACAAA 57.339 32.000 0.00 0.00 0.00 2.83
2423 2598 8.165212 CATTATGCCATAGTAATGCAAAATCG 57.835 34.615 0.00 0.00 33.18 3.34
2474 2649 3.622612 TGTTTCGCCATGATGTAGACATG 59.377 43.478 0.00 0.00 42.99 3.21
2475 2650 3.872696 TGTTTCGCCATGATGTAGACAT 58.127 40.909 0.00 0.00 39.70 3.06
2507 2682 3.857157 TCTAAAGCTTCACCCACACTT 57.143 42.857 0.00 0.00 0.00 3.16
2510 2685 3.857157 AGTTCTAAAGCTTCACCCACA 57.143 42.857 0.00 0.00 0.00 4.17
2516 2691 8.650143 ATTTTCCCATTAGTTCTAAAGCTTCA 57.350 30.769 0.00 0.00 0.00 3.02
2526 2701 7.226128 CCCTAGTCGTTATTTTCCCATTAGTTC 59.774 40.741 0.00 0.00 0.00 3.01
2527 2702 7.052248 CCCTAGTCGTTATTTTCCCATTAGTT 58.948 38.462 0.00 0.00 0.00 2.24
2528 2703 6.157471 ACCCTAGTCGTTATTTTCCCATTAGT 59.843 38.462 0.00 0.00 0.00 2.24
2529 2704 6.482308 CACCCTAGTCGTTATTTTCCCATTAG 59.518 42.308 0.00 0.00 0.00 1.73
2530 2705 6.070078 ACACCCTAGTCGTTATTTTCCCATTA 60.070 38.462 0.00 0.00 0.00 1.90
2531 2706 5.190677 CACCCTAGTCGTTATTTTCCCATT 58.809 41.667 0.00 0.00 0.00 3.16
2532 2707 4.226620 ACACCCTAGTCGTTATTTTCCCAT 59.773 41.667 0.00 0.00 0.00 4.00
2533 2708 3.583966 ACACCCTAGTCGTTATTTTCCCA 59.416 43.478 0.00 0.00 0.00 4.37
2534 2709 4.186926 GACACCCTAGTCGTTATTTTCCC 58.813 47.826 0.00 0.00 0.00 3.97
2545 2720 3.305471 GCCATCTAATCGACACCCTAGTC 60.305 52.174 0.00 0.00 35.19 2.59
2546 2721 2.628657 GCCATCTAATCGACACCCTAGT 59.371 50.000 0.00 0.00 0.00 2.57
2547 2722 2.351835 CGCCATCTAATCGACACCCTAG 60.352 54.545 0.00 0.00 0.00 3.02
2548 2723 1.611977 CGCCATCTAATCGACACCCTA 59.388 52.381 0.00 0.00 0.00 3.53
2556 2731 2.509052 TTCCAGTCGCCATCTAATCG 57.491 50.000 0.00 0.00 0.00 3.34
2578 2753 2.684881 GTGCTAACATTGTCATCCCTGG 59.315 50.000 0.00 0.00 0.00 4.45
2579 2754 3.346315 TGTGCTAACATTGTCATCCCTG 58.654 45.455 0.00 0.00 0.00 4.45
2580 2755 3.009473 ACTGTGCTAACATTGTCATCCCT 59.991 43.478 0.00 0.00 35.22 4.20
2588 2763 4.818534 ACACTTGACTGTGCTAACATTG 57.181 40.909 0.00 0.00 41.30 2.82
2620 2795 2.223340 CGAGACAAATAACCATGCAGCC 60.223 50.000 0.00 0.00 0.00 4.85
2622 2797 2.223340 GCCGAGACAAATAACCATGCAG 60.223 50.000 0.00 0.00 0.00 4.41
2636 2811 3.002348 GGTTGCTACAAATATGCCGAGAC 59.998 47.826 0.00 0.00 0.00 3.36
2649 2824 1.575419 AGTTATCCCGGGTTGCTACA 58.425 50.000 22.86 0.00 0.00 2.74
2691 2866 1.878088 CACATATCTCAGCACATGCCC 59.122 52.381 0.00 0.00 43.38 5.36


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.