>input_sequence_70508
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-----------------------------------------------ATGATGCAGCTTGCTCTCATGTACAGGTCATAC
GATTTGGACTTCGAATTCATGAATACAATGATGAGTTATGAGGCGCTCGGCTATCGCCTGCTGTGGACAAAGAAGGTATC
--------AACCCGCAATGCATACATATATATATATATATGATGTTTTGTAGTCCGCAGATGTTCATACATGATAATTAG
CATTTTGTATTTATAAAAAAGACTCACATATAACTTCGGA---TA-TGCAGCTCATGCTACCAGTTCCAATGATGGATAG
CTACTCACTATATGTCGTGGATGTCGAGGAGAGGACATTGTTGGTCATGGACCCCTGTGAGACTTCAGAGCCAATGTCAG
AGATGCAGTACAAGCATGAAGACAATGCAAACTTCATTCTAGCAGGACTTCGGCGCTGCATACATGAGAATATCCCTGGA
TGGTACATCCCTGCTCAGGGGTGGACAATCAACTACAATGTGAACATGCATGAAAGCTGTGAGATGTATGTTC-------
------------------------AAAATGCAATCATTCTAAATGTCGATATTTATTTACTGTCCATGTTTAACAGTCTG
ACTGATTT------------------------------GATGTGATGATGGACA--ATGCAGAGAGGACAGCTGGCTGCA
CGTTGTAAACTACAGTAGGAATTACACTGGCCTATATCTTCAGAATGTGCTAACCCCGGC--------------------
-------------GAGAATTATACCACACAAATATATTGAATCC---------------TTGGTTCAACTCTCTAAACAT
CTAGTCGAGCGTGCCTAA--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------
>chr5A_1_TraesCS5A01G115600
TTGTGTGCATGGGACGTGTACTGAAGCCATCCCTTTGCTGCAACCTACATGAGGTACATGTTTAAATGGGGTAGGCAAAC
TGGTGGAGTCGGCATTGAAGCCAACTGGGTGGGCTTGCGTTTCAAATTCAAAACACACGGGCGGGATAATTCAAAAC---
----ACAAATGGGCAATGTTGCTACCTGAAGGGGCAGCTAGGGCCATTCAGGCTTGGGAGTTGCAGCATGAGAGCCTCAG
TTCTTTCCCACGATGAGTCCTCAGTGACCGCTAGTGAGGAATTCTCAAAGGGTTGTGGCCTCTCGATGCAGGTTCATTGC
CTTTCCTTAGTATACATCCAACTTAGAAATCTGCTGACAATAATTATTAGTTGAATGACCATGAAATGTAGGCAGCGGCC
GAATGGGAAGCATCAGTTAACCAGGGAGATGAACCTGTGGCTGCGATAAGCGAGACTTCAGGGATTTCCACACTGTCTCT
GCAGGTGGGCATGGTAAATCAGCTAATACTAGCTTAGATTGTAGCTTACATGCATGGCTATTATGTTCGCAGTCATAGCA
GGTTAGTTCTAAACTGGGGAAGGAAGATATCCCATCAGAGGAGATCATTGCACAAGGGATTGAAGGGTACCCTGATGCAT
CAAAAGGGTTCGGGGAGCATGATCCCGCTGCTGCTCAAGTGGGGCTGGCGGTGGATGAAGGCGTGCAGCTGTACTTACCA
GATGATGACGACGTGGAAGAGAGCACTGAGCACATTGCCAAACGCTCAAGACTGAACGCCTGATTTACTCTTGTGCTAAG
TAGAGACAGAGTAGGCAATGATGCCTTTGCCTTCTATCTGACTTCTGTACTGAATAATTAGTCGTGTGTACTATGTATCA
ACTAGATCAGCAGTAGTTAGAGCGTAGTTGTTTGAAGCCAAGTACAAACTTCTGTACTTAAAGAAATGCCTCTGCCGTAT
GACTCTTGTATTATTTATTAAGTTGGTTTGAGATTAATCGCGTGAGCATGATGCAGCTTGCTCTCATGTACAGGTCATAC
GATTTGGACTTCGAATTCATGAATACAATGATGAGTTATGAGGCGCTCGGCTATCGCCTGCTGTGGACAAAGAAGGTATC
--------AACCCGCAATGCATACATATATATATATATATGATGTTTTGTAGTCCGCAGATGTTCATACATGATAATTAG
CATTTTGTATTTATAAAAAAGACTCACATATAACTTCGGA---TA-TGCAGCTCATGCTACCAGTTCCAATGATGGATAG
CTACTCACTATATGTCGTGGATGTCGAGGAGAGGACATTGTTGGTCATGGACCCCTGTGAGACTTCAGAGCCAATGTCAG
AGATGCAGTACAAGCATGAAGACAATGCAAACTTCATTCTAGCAGGACTTCGGCGCTGCATACATGAGAATATCCCTGGA
TGGTACATCCCTGCTCAGGGGTGGACAATCAACTACAATGTGAACATGCATGAAAGCTGTGAGATGTATGTTC-------
------------------------AAAATGCAATCATTCTAAATGTCGATATTTATTTACTGTCCATGTTTAACAGTCTG
ACTGATTT------------------------------GATGTGATGATGGACA--ATGCAGAGAGGACAGCTGGCTGCA
CGTTGTAAACTACAGTAGGAATTACACTGGCCTATATCTTCAGAATGTGCTAACCCCGGC--------------------
-------------GAGAATTATACCACACAAATATATTGAATCC---------------TTGGTTCAACTCTCTAAACAT
CTAGTCGAGCGTGCCTAATTGTCATGTTCATT-------ATGTCCAGGCGCGCCTTAACTACCTGCGGCAGTCAATTGCA
TATGAAGTTATCTCCATGAGGGGGAACATGGGAGAGCTCCCAGATTTCATGCTTGAGAAAGTCTTGCCATTCTAGAAAGC
TACAAGATGAGAGGGCGCATTTTGGAACAGTATTTGCGCGATGAGTA-AGAATCCTGTTTGAATATGAGGACAACCGTGA
ATGTTAGTTGCCTCCCCACGTGTATGTGGTGTGGTAATGGTTCGAACGGTTGACCAGCCCATGAAAACTGAAGACAAGTT
GGTGCCGATAAAGGTTGCAATTTATCTTGCACCCTCCTTCTGATATG---------------------------------
---ACTAAGTTATTACTAGATGAATCGCGTATGTAGGATTGCCATTTGACTTCTGCCCGGCACTAGAAGACTGAAGACAT
CACGGCGTCGAGAATTCACACAATTTAGCTTGCGCCCCCAACTAAAGTGGTGTGTAAGTGATTGTGTTCACTTCCTGTAT
GCCATGTACTAGTTCAAGCCAAACCTGTTTGTGACATTTATGTGAGAAGACAGTCATGTTTAGACTGTTCATTGTGTAAG
ACGTAATTGTGGACTCCGACAATTAATTTTGAACCATACTGTTGTGTGCTAGCATTTCTATGATGTTTGGTTTGTGCGTA
AACTGATTATGTAGTACAATATGCAATTGATGAATTACGATTTTGCATTACTATGGCATAATGCAATATGGGTATGCCTC
TGACATAGCATGTCTACATCATGGCGAAACATGGCGGGGCAAAGTGTGGGTGAAGCTTTAGAACTAATGGGAAAATAACG
ACTAGGGTGTCGATTAGATGGCGACTGGAAAACCAGGGATGACAATGTTAGCACAGTCAAGTGTTCCTATCGCAGGCTGC
ATGGTTATTTGTCTCGGCATATTTGTAGCAACCCGGGATAACTATAAATTTAAATATATCGAACAGGGCATGTGCTGAGA
TATGTGAGTTGAATTGTCGCCC
>chr3A_1
TTGTGTGCATGGCACGTGTACTGAAGCCATCCCTTTGCTGCAACCTGCATGAGGTACATGTGTAAATGGAGTAGGCAAAC
TAGTGGAGTTGGCATTGAAGCGAACTGAGCGGGCTTGCGTTTCAAATTCAAAATGCACGGGCGGGATGAGGCCGATGACT
GTTTACAAATGGGCAATGTTGCAACCTGAAGGGGCGGCTAGGGCCATTCAGGCTTAGGAGTTGCAGCATGGGAGCCTCAT
TTCTTTCCCACCAAGAATCCTCAGTGATCGCAAGTGAGGAATTCTCAAAGGGTTGCGGACTCTCGATGTAGGTTCGTTGC
CTTTCCTTAGCATACACCCAACTTAGAAATCTACTGACCCTGATTATTAGTTGATTCACCGTGAAATGCAGGCAGCGGCC
GATTTGGAAGCATCAGTTAACCAGGGAGATGAACCTCTAGTTGCGATAAGCGAGACTTCAGGGATTTCCACATTGTCTCT
GCATGTGGGCATGGTAAATCAGCTAATACTAGCTTAGATTGTAGCTTACATGCATGGCTAATCTGTTCGCAGTCAGAGCA
GGTTAGTGCTGAACTGGGGAAGGAAGATATCCCATCAGAGGAGATCA---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---TTGTACAAGGGATTGAAGGGTACCCTGATGCATCAAAAGGGTTCGGGGAGCACGATCCCGCTGCTGC----------
-------------------------------------------------------------------------------T
CAAGTGGGGCTGGAGGTGGATGAAGGCG---------------------------------------------TGGAGTT
GTACTTACCAGATGATGACGACGTTGAGGAGAGCACT-------------------------------------------
-----------------------------------------------------------------GAGCACATCGCTA--
--------------------------------------------------------------------------------
----------------------------------------------------------AATGCTCAAGACTGAACACCTG
ATTAACTCT-----------------------------------------------------------------------
---------------------------------------------TGTGCTAAGTTGAGTCAGAGTAGGCAATGATGCCT
TTGCCTTTTATCCGAGTTCTGTACTGAATAATTAGTCGTGTGTACTATGTAGCAGCTAGATCTAG---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------ATCAGCAGTAGACTGAGCTGAGTTG
TTTGACGCCAAGTACAGACTTCTGTACTTAAAGAAATGCCTCTGCCGTATGAGCCTTATATT-----------------A
TTGATTAAGTTGGTTTGAGAGTAACCGCGTGAGCATGATGTAGC------------------------------------
--------------------------------------------------------------------------------
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----------------------
>chr3A_1006
--------------------------------------------------------------------------------
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----------------------------------------------------GCAGCTTGCTCTCATGTATAGGTCATAC
GATTTGGACTTCGAATTCATGAATACAAGGATGAGTTATGAGGCGCTCGGCTATTGCCTGCAGTGGACAAAGAAGGTATC
--------AACTCGCAATGCATACATATATATATATATATGATGTTTTGTATTCCGCATATGTTCGTACATCATAATTAG
CATTTGGTATGTATTAAAAAGACTCACCTATTACTTCGGA---TA-TGCAGCTCATGCTACCAGTTCCAATGATGGATAG
CTACTCACTATATGTCGTGGATGTCGAGGAGAGGACATTGTTGGTCATGGACCCCTGTGAGACTTCAGAGCCAATGTCAG
AGGTGCAGTACAAGCATGAAGACAATGCAAACTTCATTCTAGCAAGACTTCGGCGCTGCATACATGAGAATATCCCTGGT
TGGTACATCCCTGCTCAGGGGTGGACAATCAACTACAATGTGAACATGCATGAAAGCTGCGAGATGTATGGTC-------
------------------------AAAATGCAATCACTCTAAATGTCGATATTTATTTACTATCCACATTTAACAGTCTG
ATTGATTT------------------------------GATGTGATGATGGAGA--ATGCAGAGAGGACAGCTGGTTGCA
CATTGTAAACTACAGCAGGAATGACACTGGCCTATATCTTCAGAATGTGCTAACACCGAT--------------------
-------------GAGAATTATACCACACGAATATATTGAAGCC---------------TTGGTTCAACTCTGTAAACAG
CTAGTCGAACCTCCCTAATTGTCATGTTCATT-------ATGTGCAGGCGCGCCTTAACTACCTGCGGCAGTCAATTGCA
TATGAAGTTATCTCCATGAGGGGGAACATGGGAGATCTCCCAGATTTCATGCTTGAGGAAGTCCTGCCATTCTAGGCAGC
TACAAGATGAGAGGAAGCATTTTGAAACAGTATTTGTGCGA-CGGGTGAGAATCTTGTTTGAATATGACGACAACCGCGA
ATGTTAGTTGCCTCCCCACATGTATGTGGTGTGATAATGGTTCAAACGGTTGACCGGCCGATGAAAACTGAAGACATGTT
GGCGCCGATAAAGGTTGCAATTTAGCTTGCACCCACCTCCTGATATGTGCATGTGTGATTGTGACCACTTGTTGGCTTCA
ATGAATAAGTTATTACCAGATGTATCACGTATGTAGGATTGCCATTTGTGTACTACCCGGCACTAGAAGACTGAAGACAT
CACGGCATCGAGAATTGGCACAATTGAGCTTGCG-CCCCAACTAAAGTGGCGTGTAAGTGATTGTGTTCACTGCATGTAT
GCCATGTACTAGTTCAAGACAAACCTATTTGTGACATTTATGTAAGAAGACAGTCATGTTTAGGCTGTTCATTGTGTAAG
ACGTAAGTGTGGACTCCGACAATTAAGTTTGAACCTTACTGTTGTGTGCTAGCAGTTCTGTGATGTTTGGCTTGTGCGTA
AACTAATTATGTAGTACAATATGCAATTGATGAATTATGATTTTGCATTACTATGGCATAATGCAATATGGGTATGCCTC
TGACATAGTGTGTCTACATCATGGCGAAACATGGCGGGGCAGAGGGTGGGCGAAGCTTTA--------------------
---AGGTTGTTGATTAGATGGAGACTGGAAAATGTGGGATGATAATGTTAGCACAGTCAAGTGTTCCTATCGCATGTTGC
ATGGTTATTTATCTCGGCATATTAGTAGCAACCCGGGATAACTATAAATTTAAATATATCGAACAAGGCATGTGCTGAGA
TATGTGACTTGAATTGTCGCCC
>chr5D_1007
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------CAGCTTGCTCTCATGTACAGGTCATAC
GATTTGGACTTTGAATTCATGAATACGATGATGAGTTATGAGGCACTTGGCTATCGGCTGCAATGGACAAAGAAGGTATA
GTTTCAGTGC-----------------TAAATGAATTATGCTC------------------------------ACAAGTA
CAAATATGATTGCGAA--ATGAAGTCATATTAACGACAGGCATGCTTGCAGCTAATGCTCCCAGTTCCATTTATGGAAAG
CTGGTCTCTATATGTTGTGGATGTTGAAGAAAGGACTTTGTTGGTCATGGACCCATGCGAGACGTCCGAGCCTATCAATG
AGATGCGATACAAGCATGAAGACAATGCAAACTTCATCCTGGCAGGACTTCGGCGATGCATACATGAGAACATCGCGGGG
TGGTACGTGCCGGCTCAAGGCCGGACCATCAACTACAATGTTGGCATGCATGCTAGCTGTGAACTGTAAGTTTGCTCATT
GAGAATTGAC--------------------------------------ATTTGTACATAATGCTAAAAATAAAATATCTG
ACTAATTTTCATTTCGCACCAT--------------------------------ATATGCAGAGAGGACAGTTGGTTGCA
CATTGTTAACTACAGCAGGGAGTACACTGGCCTGTATCTCCAGACTATACTAACCCCTGT--------------------
-------------AAGCACACGCATACAACACCATCATGCGCTGATTTCTGTGATCATATTTAGTCATCAGAAGCAATGC
TGACAGCTTAATAGAACTTG----------TT-------TTCCGCAGAGCCGCCTAAACTATCTACGTCAGTCAATTGCA
TATGAAGTTATTTCCATGAGGGGAAACATTGGGGAGCTGCCCGACTTCATGATTGAGGAGGTGCTGCCATTCTA------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------
>chr3D_1008
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------------------AGCTCGCCCTTATGTACCGGTCATAC
AATTTGGACTTTGAATTCATGAATACAATGATGAGTTATGAGGCACTCGGGTATCGCCTGCAGTGGACAAAGAAGGTAC-
------AAAAATTTCAGCACATGATATGATATAAAATCAGAGTGTTAT-----------------GTGCATATATATTAT
CAATTGGGGTGCATTAATATGAACTCATCCAATGTTGTGATTTTT---CAGCTGATGCTGCCGGTTCCAATGATGGAAAG
CTGGTCACTATATGTAGTTGATGCTGAGGAGAGGAAATTATTGGTCATGGACCCATGTTTAACATCTGGGCCAATCGGAC
AGATGCAGGACAAGCATGAAGACAATGCAAACTTCATCCTCGCAGGACTACGGCGGTGCATACATGAGAACATCGCTGGT
TGGTATGTCCCGGCTCAGGGATGGAGAATCGAGTACAACGTCGGCATGCATGACAGCTCCACAATGTATGTTC-------
------------------------AAAGAGTGCCCC--------------------------------TTTCAAGTTCTA
AAAAATTGTATGTTGTGGATTAATAATCTGACTTGATTGATGTGATAATGGAAAACAAGCAGGGAGGACAGCTGGTTGCA
CATTGTCAACTACAGCAGGAATTACACTGGGCTATATCTTCAGAATGTGCTAACCCCGGT--------------------
-------------GAGCACTGAACTGTACAAACATGTTGGACAGTTC----------TATTAGCCGTTTCAATCACATTG
ATGAGCCTGCTAATAATCAAACTCAAA---TA-------TTTTGCAGGCACGCCTAAACTACATGAGGCAGTCAATTGCA
TATGAAGTTATATCAATGAGGGGGAACATGGGGGAGCTGCCAGATTTCATGGTTGAGGAAGTGCTGCCATTCTAGAGTGT
TAGGCGATGACACAGCTAATTTTGGACCAAACGTTGCGGCTTCGGAACATACACCTGGTTGCATAGGGTGATAATTGGGA
ACATTAGTTGCCATCCCACATCTATGAGGTGTGTTAATGGTTCCCTAGTTTTGCTAGCAGCAGAAAACTGAAGACATTTT
GGAGCCGGGAAAGGATGCAATTTAGCTTGCACCC----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------
>chr1D_1008
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------------------AGCTCGCCCTTATGTACCGGTCATAC
AATTTGCACTTTGAATTCATGAATACAATGATGAGTTATGAGGCACTCGGGTATCGCCTGCAGTGGACAAAGAAGGTAC-
------AAAAATTTCAGCGCATGATATGATATAAAATCAGAGTGTTAT-----------------GTGCATATATATTAT
CAATTGGGGTGCATTAATATGAACTCATCCAATGTTGTGATTTTT---CAGCTGATGCTGCCGGTTCCAATGATGGAAAG
CTGGTCACTATATGTAGTTGATGCTGAGGAGAGGAAATTATTGGTCATGGACCCATGTTTAACATCTGGGCCAATCGGAC
AGATGCAGGACAAGCATGAAGACAATGCAAACTTCATCCTCGCAGGACTACGGCGGTGCATACATGAGAACATCGCTGGT
TGGTATGTCCCGGCTCAGGGATGGAGAATCGAGTACAACGTCGGCATGCATGACAGCTCCACAATGTATGTTC-------
------------------------AAAGAGTGCCCC--------------------------------TTTCAAGTTCTA
AAAAATTGTATGCTGTGGATTAATAATCTGACTTGATTGATGTGATAATGGAAAACTAGCAGGGAGGACAGCTGGCTGCA
CATTGTCAACTACAGCAGGAATTACACTGGGCTATATCTTCAGAATGTGCTAACCCCGGT--------------------
-------------GAGCACTGAACTGTACAAACATGTTGGACAGTTC----------TATTAGCCGTTTCAATCACATTG
ATGAGCCTGCTAATAATCAAACTCAAA---TA-------TTTTGCAGGCACGCCTAAACTACATGAGGCAGTCAATTGCA
TATGAAGTTATATCAATGAGGGGGAACATGGGGGAGCTGCCAGATTTCATGGTGGAGGAAGTGCTTCCATTCTAGAGTGT
TAGGCGATGACACAGCTAATTTTGGACCAAACCTTGCGGCTTCGGAACATACACCTGGTTGCATAGGGTGATAATTGGGA
ACGTTAGTTGCCATCCCACATCTATGAGGTGTGGTAATGGTTCCCTAGTTTTGCCAGCAGCAGAAAACTAAAGACATTTT
GGAGCCGGGAAAGGATGCAATTTAGCTTGCACCC----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------
>chr2A_1008
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------AGCTCGCTCTTATGTACAGGTCTTAT
GATTTGGACTTCGAATTCATGAATACAATGATGAGCTATGAGGCGCTCGGGCATCGACTGCAATGGACAAAGAAGGTAGC
CCGTCAACAAATATACTAGCATGAGCTTATATGAACATTGCTG------------------------------ATATTAT
CAAATGTGACAGATTGAACAAGAATATATGTTCTTCTATTTGCTA-TGCAGCTCATGCTCCCAGTCCCAATGATGGAAAG
TTGGTCGCTATATGTTGTGGATGTCAAAGAGAGGACATTGTTGGTCATGGACCCATGTGAGACTTCAGAGCCAATTGAGG
AGATGCAGTACAAGCATGAAGACAATGCAAACTTCATCCTAGCGGGACTTAGGCGTTGCATACATGAGAACATCACTGGG
TGGTATGTGCCGGCTCAGGGCTGGACGATCAACTACAACGTTGGCATGCATGAAAGCTGCGAGATGTATGATGGATGACC
ACATGTTCGAATTGTCAAAAATATAAATTGTGCCAC--------------------------------ATACAAGTTCTA
ACTTATTTTCATGTGCTCGTGT--------------------------------ACAAGCAGAGAGGATAGCTGGCTGCA
CATTATCAACTACAGCAGGGAGTACACTGGGCTATATCTTCAGACTCAGCTAACCCCAGT--------------------
-------------GAGCAGACGACCTTAAC----------------------------ATTTATTCATCACTTGAAACAA
ATATGCGAGAATGTCTAAAAATGAGAAGTGCTAAA------TTGCAGGGGCGCCTAAACTACCTGCGACAATCCATAGCA
TATGAAGTTATCTCAATGAGGGGCAATGTGGGTGAGCTGCCAGACTTCATGGTTGAGGAGGTGCTGCCATTCTAAATGCT
AC------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------
>chr5D_1019
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------ATGTACCGGTCATAC
AATTTGGACTTTGAATTCATGAATACGATGATGAGTTATGAGGCACTCGGGTATCGCCTGCAGTGGACAAAGAAGGTAC-
------AAAAATTTCAGCGCATGATATGATATAAAATTAGAGTGTTAT-----------------GTGCATATATATTAT
CAATTGGGGTGCATTTATATGAACTCATCCAATGTTGTGATTTTT---CAGCTGATGCTGCCGGTTCCAATGATGGAAAG
CTGGTCACTATATGTAGTTGATGCTGAGGAGAGGAAATTATTGGTCATGGACCCATGTTTAACATCTGAGCCAATCGGAC
AGATGCAGGACAAGCATGAAGACAATGCAAACTTCATCCTCGCAGGACTACGGCGGTGCATACATGAGAACATCGCTGGT
TGGTATGTCCCGGCTCAGGGATGGAGAATCGAGTAGAACGTCGGCATGCATGACAGCTCCACAATGTATGTTC-------
------------------------AAAGAGTGCCCC--------------------------------TTTCAAGTTCTA
AAAAATTGTATGCTGTGGATTAATAATCTGACTTGATTGATGTGATAATGGAAAACAAGCAGGGAGGACAGCTGGCTGCA
CATTGTCAACTACAGCAGGAATTACACTGGGCTATATCTTCAGAATGTGCTAACCCCGGT--------------------
-------------GAGCACTGTACTGTACAAACATGTTGGACAGTTC----------TATTAGCCGTTTCAATCACATTG
ATGAGCCTGCTAATAATCAAACTCAAA---TA-------TTTTGCAGGCACGCCTAAACTACATGAGGCAATCAATTGCA
TATGAAGTTATATCAATGAGGGGGAACATGGGGGAGCTGCCAGATTTCATGGTTGAGGAAGTGCTGCCATTCTAGAGTGT
TAGGCGATGACACTGCTAATTTTGGACCAAACGTTGCGACTTCGGAACATACACCTGGTTGCATAAGGTGATAATTGGGA
ACGTTAGTTGCCATCCCACATCTATGAGGTGTGGTAATGGTTCCCTAGTTTTGCCAGCAGCAGAAAACTGAAGACATTTT
GGAGCCGGGAAAGGATGCAATTTAGCTTGCACCC----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------
>chr6D_1228
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------TGCAGCTGATACTCCCAGTTCCAGCGATGGAAAG
CTGGTCACTTTATGTTGTGGATGTCGAAGAGAGAACATTGTTGGTCATGGACCCATGCGAGGCTACAGAGCCAATTGAAG
AGATGCAGTACAAGCATGAAGACAATGCAAACTTCATTCTGGCAGGGCTTCAACGTTGCATACATATGAATATCTCCGGG
TGGTATGTGTCTGCTGAGGGTTGGAGCATCAACTACAATGTGGGCATGCATGATAGCTGCGAGATGTATGTTC-------
------------------------AAACAGTCTAACCCCAGAATACAA------ATATACAATTCAGATAAAACTGTCTA
ACTGATTCACATGCACCGTTCTGCC--------------------------------TGCAGAGAGGACAGTTGGCTGCA
CGTTGTTAACTACACCAGGGAGTACACTGGGCTATATCTCTGGAATCAGCTAACACCAGG--------------------
-------------AAGCATTCTACTATAAACCCT-----GACATTAC----------TATTTGGTTGTCAGTG---ATAG
AATAGCATGCTCAGTCAGGGGAAAATCATAACAACTTACATTTGCAGGGCTGGCTGACCTATCTGCGCCAGTCAATTGCA
TTTGAAGTGATCTCCATGAGAGGGAACATGGGGGAGCTGCCGGATTTCATGATCGAGGAGGTCATGCTACTCTA------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------
>chr6D_1228
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------TGCAGCTGATACTCCCAGTTCCAACGATGGAAAG
CTGGTCACTTTATGTTGTGGATGTCGAAGAGAGAACATTGTTGGTCATGGACCCATGCGAGGCTACAGAGCCAATTGAAG
AGATGCAGTACAAGCATGAAGACAATGCAAACTTCATTCTGGCAGGGCTTCAACGTTGCATACATATGAATATCTCCGGG
TGCTTTGTGTCTGCTGAGGGTTGGAGCATCAACTACAATGTGGGCATGCATGATAGCTGCGAGATGTATGTTC-------
------------------------AAACAGTCTAACCCCAGAATACAA------ATATACAATTCAGATAAAACTGTCTA
ACTGATTCACATGCACCGTTCTGCC--------------------------------TGCAGAGAGGACAGTTGGCTGCA
CGTTGTTAACTACACCAGGGAGTACACTGGGCTATATCTCTGGAATCAGCTAACACCAGG--------------------
-------------AAGCATTCTACTATAAACCCT-----GACATTAC----------TATTTGGTTGTCAGTG---ATAG
AATAGCATGCTCAGTCAGGGGAAAATCATAACAACTTACATTTGCAGGGCTGGCTGACCTATCTGCGCCAGTCAATTGCA
TTTGAAGTGATCTCCATGAGAGGGAACATGGGGGAGCTGCCGGATTTCATGATCGAGGAGGTCATGCTACTCTA------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------
>chr3D_1230
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------CAGCTGATGCTGCCGATTCCAATGATGGAAAG
CTGGTCACTATATGTAGTTGATGCTGAGGAGAGGAAATTGTTGGTCATGGACCCATGTTTGACATCTGAGCCAATCGGAC
AGATGCAGGACAAGCATGAAGACAATGCAAACTTCATCCTAGCAGGACTACGGCGGTGCATACATGAGAATATCGCTGGT
TGGTATGTCCCGGCTCAAGGATGGAGAATCGAGTACAACGTCGGCATGCATGACAGCTCCACAATGTATGTTC-------
------------------------AAAGAGTGCACC--------------------------------TTTCAAGTTCTA
AAAAATTGTATGCTGTGGATTAATAATCTGACTTGATTGATGTGATAATGGAAAACAAGCAGGGAGGACAGCTGGCTGCA
CATTGTCAACTACAGCAGGAATTACACTGGGCTATATCTTCAGAATGTGCTAACCTCGGT--------------------
-------------GAGCACTGTACCGTACAAACATGTTGGATAGTTC----------TATTAGCCGTTTCAATCACATTG
ATGAGCCTGCTAATAATCAAACTCAAA---TA-------TTTTGCAGGCACGCCTTAACTACATGAGGCAATCAATTGCA
TATGAAGTTATATTAATGAGGGGGAACATGGGGGAGCTGCCACATTTCATGGTTGAGGAAGTGCTGCCATTCTAGAGTGT
TAGGCGATGACACTGCTAATTTTGGACCGAACGTTGCGGCTTTGGAACATACACCTGGTTGCATAAGGTGATAATTGGGA
ACGTTAGTTGCCATCCCACATCTATGAGGTGTGGTAATGGTTCCCTAGTTTTGCCAGCAACAGAAAAATGAAGACATTTT
GGAGCCGGGAAAGGATGCAATTTAGCTTGCACCC----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------
>chr1D_1230
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------CAGCTGATGCTGCCGGTTCCAATGATGGAAAG
CTGGTCACTATATGTAGTTGATGCTGAGGAGAGGAAATTGTTGGTCATGGACCCATGTTTGATATTTGAGCCAATCGGAC
AGATGCAGGACAAGCATGAAGACAATGCAAACTTCATCCTCGCAGGACTACGGCGGTGCATACATGAGAACATTGCTGGT
TGGTATGTCCCGGCTCAGGGATGGAGAATCGAGTACAACGTCGGCATGCATGACAGCTCCACAATGTATGTTC-------
------------------------AAAGAGTGCCCC--------------------------------TTTCAAGTTCTA
AAAAATTGTATGCTGTGGATTAATAATCTGACTTGATTGATGTGATAATGGAAAACAAGCAGGGAGGACAGCTGGCTGCA
CATTGTCAACTACAGCAAGAATTACACTGGGCTATATCTTCAGAATGTGCTAACCCCGGT--------------------
-------------GAGCACTGTACTGAACAAACATGTTGGACAGTTC----------TATTAGCCGTTTCAATCACATTG
ATGAGCCTGCTAATAATCAAACTCAAA---TA-------TTTTGCAGGCACGCCTTAACTACATGAGGCAATCAATTGCA
TATGAAGTTATATTAATGAGGGGGAACATGGGGGAGCTGCCAGATTTCATGGTTGAGGAAGTGCTGCCATTCTAGAGTGT
TAGGCGATGACACTGCTAATTTTGGACCAAACGTTGCGGCTTCGGAACATACACCTAGTTGCATAAGGTGATAATTGGGA
ACGTTAGTTGCCATCCCACATCTATGAGGTGTGGTAATGGTTCCCTAGTTTTGCCAGCAGCAGAAAACTGAAGACATTTT
GGAGCCGGGAAAGGATGCAATTTAGCCTGCACCC----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------
>SNPs
------------S---------------------------------S--------------S-------S----------
-S-------S-----------S-----S-S-----------------------SS------------S-SS-SS-SS---
----------------------S------------S-------------------S--------------S--------S
-----------S-S--S----------S---S-----------------------S--S---------S------S----
----------S-----S---------------S-----SS-S------------S-S---S-------S-----------
--S-S-------------------------------S-S-S-------------------------------S-------
---S--------------------------------------------------------S-S------------S----
-------S--S------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------------------------
-------------------------------------------------------------S------------------
-----------S---------------------------------------S------S------S-----S--------
-----S--------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------S
--------------------------------------------------------------------------------
------------------------------------S-----------------------------S-------------
----------------------------------------------------S---------------------------
---------------S-------------------------------------------S--------------------
------------------------------------------------------------------------S------S
----------S--------------------------------S------------------------------------
---------------------------------------------------------S-----S------------S---
------------------------------------------SS-S----------------------S--------S--
-------------------S-----------------------S---------------S----------------S---
----------------------------------S---S-----------------------------------------
----S-----------S-------------------------------SS-S--S-------------------------
------S---------SS-------S--------S---------------S---------------------S-S-----
------------------S-------S----------------S-------------------S----------------
------S-------------------S--------S------------------S----S----------S---------
----S--------------------------------S------------------------------------------
--------SS-------------------------------S--S-----S---------SSSSSSSSSSSSSSSSSSSS
SSS---S---S----------S----------SSS-------S-------------------------------S-S---
----------S------------S-----------------------------------------S--------------
-------S--------------
>forward_762
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------GCACTGAGCACATTGCCAAA--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------
>reverse_2290
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------CTTCTGCCCGGCACTAGAAG-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------
