Multiple sequence alignment - TraesCS5A01G099000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G099000 chr5A 100.000 2927 0 0 1 2927 141030427 141033353 0.000000e+00 5406
1 TraesCS5A01G099000 chr5A 95.227 419 19 1 1 419 649560562 649560145 0.000000e+00 662
2 TraesCS5A01G099000 chr5A 94.511 419 23 0 1 419 433579389 433579807 0.000000e+00 647
3 TraesCS5A01G099000 chr5A 94.511 419 22 1 1 419 520232167 520232584 0.000000e+00 645
4 TraesCS5A01G099000 chr5A 86.760 287 27 3 2441 2716 666739935 666740221 2.830000e-80 309
5 TraesCS5A01G099000 chr5A 86.063 287 27 4 2441 2715 560537642 560537927 2.210000e-76 296
6 TraesCS5A01G099000 chr5A 84.138 290 32 5 2441 2718 45741850 45742137 4.810000e-68 268
7 TraesCS5A01G099000 chr5A 84.000 275 32 8 2441 2714 269315152 269314889 1.350000e-63 254
8 TraesCS5A01G099000 chr5A 79.921 254 39 7 2441 2683 596668373 596668625 3.000000e-40 176
9 TraesCS5A01G099000 chr5D 90.631 1633 72 36 823 2415 126261068 126262659 0.000000e+00 2093
10 TraesCS5A01G099000 chr5D 88.070 285 21 8 2441 2713 544392938 544393221 2.810000e-85 326
11 TraesCS5A01G099000 chr5B 92.044 1458 60 24 796 2228 139152451 139153877 0.000000e+00 1999
12 TraesCS5A01G099000 chr5B 89.825 285 18 2 2441 2714 622543401 622543117 3.590000e-94 355
13 TraesCS5A01G099000 chr5B 87.857 140 15 1 2787 2926 139158999 139159136 2.330000e-36 163
14 TraesCS5A01G099000 chr7B 85.910 802 104 8 1 796 143246932 143246134 0.000000e+00 846
15 TraesCS5A01G099000 chr7B 87.755 294 23 3 2435 2716 746545835 746546127 6.050000e-87 331
16 TraesCS5A01G099000 chr1D 84.717 831 70 27 1 798 490426393 490425587 0.000000e+00 778
17 TraesCS5A01G099000 chr1D 91.688 397 29 4 403 795 155720955 155721351 5.510000e-152 547
18 TraesCS5A01G099000 chr1D 90.654 214 17 3 2504 2716 298645089 298644878 6.180000e-72 281
19 TraesCS5A01G099000 chr6A 90.236 594 55 3 1 593 412403703 412403112 0.000000e+00 773
20 TraesCS5A01G099000 chr6A 94.749 419 21 1 1 419 453645726 453645309 0.000000e+00 651
21 TraesCS5A01G099000 chr6A 83.158 285 37 3 2443 2716 357949383 357949667 1.740000e-62 250
22 TraesCS5A01G099000 chr6A 81.597 288 40 8 2443 2718 84051151 84050865 2.940000e-55 226
23 TraesCS5A01G099000 chr6A 85.581 215 27 4 2504 2717 828122 827911 3.800000e-54 222
24 TraesCS5A01G099000 chr6A 81.315 289 39 6 2441 2716 69008240 69007954 1.370000e-53 220
25 TraesCS5A01G099000 chr6A 80.277 289 42 6 2441 2716 317381817 317381531 1.380000e-48 204
26 TraesCS5A01G099000 chr7A 93.556 419 27 0 1 419 688377682 688378100 2.480000e-175 625
27 TraesCS5A01G099000 chr7A 88.032 493 45 12 313 795 714611886 714612374 3.270000e-159 571
28 TraesCS5A01G099000 chr7A 82.353 289 36 6 2441 2716 257781700 257781414 1.360000e-58 237
29 TraesCS5A01G099000 chr7A 82.332 283 35 6 2441 2710 165048529 165048249 6.310000e-57 231
30 TraesCS5A01G099000 chr3A 93.556 419 26 1 1 419 79264203 79264620 8.910000e-175 623
31 TraesCS5A01G099000 chr3A 91.206 398 29 6 403 795 10356750 10357146 1.190000e-148 536
32 TraesCS5A01G099000 chr3A 91.206 398 29 6 403 795 453818300 453818696 1.190000e-148 536
33 TraesCS5A01G099000 chr3A 76.489 319 60 9 1015 1330 80433385 80433079 3.020000e-35 159
34 TraesCS5A01G099000 chr3B 86.900 542 49 10 1 539 678005018 678004496 3.250000e-164 588
35 TraesCS5A01G099000 chr3B 87.197 289 26 2 2441 2718 754770248 754769960 4.710000e-83 318
36 TraesCS5A01G099000 chr3D 91.667 396 26 6 403 795 40729666 40730057 2.570000e-150 542
37 TraesCS5A01G099000 chr7D 91.392 395 30 4 403 793 131313425 131313819 3.320000e-149 538
38 TraesCS5A01G099000 chr7D 81.991 211 36 2 2504 2714 52698474 52698682 8.340000e-41 178
39 TraesCS5A01G099000 chr2D 91.184 397 31 4 403 796 270905682 270905287 1.190000e-148 536
40 TraesCS5A01G099000 chr2D 83.275 287 34 5 2443 2717 643827855 643828139 4.840000e-63 252
41 TraesCS5A01G099000 chr1B 87.762 286 22 6 2441 2714 359071990 359072274 3.640000e-84 322
42 TraesCS5A01G099000 chr1B 87.018 285 25 3 2441 2714 329962783 329962500 7.880000e-81 311
43 TraesCS5A01G099000 chr1B 79.834 362 32 17 1458 1813 67503375 67503049 2.940000e-55 226
44 TraesCS5A01G099000 chr4B 86.364 286 26 6 2441 2714 203096089 203096373 1.710000e-77 300
45 TraesCS5A01G099000 chr4D 85.263 285 29 4 2441 2713 322287674 322287957 6.180000e-72 281
46 TraesCS5A01G099000 chr1A 80.969 289 39 8 2441 2716 144102670 144102385 6.350000e-52 215
47 TraesCS5A01G099000 chr1A 79.649 285 45 4 2441 2713 133315711 133315994 2.980000e-45 193
48 TraesCS5A01G099000 chr6D 81.034 290 36 11 2433 2708 414248318 414248602 2.290000e-51 213
49 TraesCS5A01G099000 chr2A 84.444 180 17 7 2441 2609 763488747 763488926 1.800000e-37 167


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G099000 chr5A 141030427 141033353 2926 False 5406 5406 100.000 1 2927 1 chr5A.!!$F2 2926
1 TraesCS5A01G099000 chr5D 126261068 126262659 1591 False 2093 2093 90.631 823 2415 1 chr5D.!!$F1 1592
2 TraesCS5A01G099000 chr5B 139152451 139153877 1426 False 1999 1999 92.044 796 2228 1 chr5B.!!$F1 1432
3 TraesCS5A01G099000 chr7B 143246134 143246932 798 True 846 846 85.910 1 796 1 chr7B.!!$R1 795
4 TraesCS5A01G099000 chr1D 490425587 490426393 806 True 778 778 84.717 1 798 1 chr1D.!!$R2 797
5 TraesCS5A01G099000 chr6A 412403112 412403703 591 True 773 773 90.236 1 593 1 chr6A.!!$R5 592
6 TraesCS5A01G099000 chr3B 678004496 678005018 522 True 588 588 86.900 1 539 1 chr3B.!!$R1 538

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
828 866 0.179092 GGAATGGCATGGCAAAGCTC 60.179 55.0 27.04 18.34 0.0 4.09 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2440 2543 0.035439 TCCTCCAAACCGAATGAGGC 60.035 55.0 0.0 0.0 43.33 4.7 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 3.194116 GCATCCATCTTCCAACACACAAT 59.806 43.478 0.00 0.00 0.00 2.71
28 29 4.074259 TCCATCTTCCAACACACAATGAG 58.926 43.478 0.00 0.00 0.00 2.90
53 54 4.081406 AGCATGTTCAAAATGAGCTACCA 58.919 39.130 0.00 0.00 0.00 3.25
63 64 7.771183 TCAAAATGAGCTACCATAATTGAACC 58.229 34.615 11.20 0.00 33.47 3.62
66 67 7.902920 AATGAGCTACCATAATTGAACCAAT 57.097 32.000 0.00 0.00 35.39 3.16
67 68 7.902920 ATGAGCTACCATAATTGAACCAATT 57.097 32.000 9.49 9.49 44.74 2.32
75 76 7.500141 ACCATAATTGAACCAATTAATGAGCC 58.500 34.615 13.88 0.00 45.41 4.70
150 151 3.781307 CCATCCGGGGTGCTTCGA 61.781 66.667 0.00 0.00 0.00 3.71
229 230 2.250939 CGGCAAGCCACAAAGACGA 61.251 57.895 12.19 0.00 35.37 4.20
273 274 2.513666 GCCGGACGAATCCATGCA 60.514 61.111 5.05 0.00 46.67 3.96
287 288 1.896660 ATGCACGCAAACCTTCGGT 60.897 52.632 0.00 0.00 37.65 4.69
369 370 3.319198 GCTCCCCGACCACTCCAA 61.319 66.667 0.00 0.00 0.00 3.53
371 372 2.122769 TCCCCGACCACTCCAACA 60.123 61.111 0.00 0.00 0.00 3.33
547 582 0.252284 GGGAGAGGAGAGGTGGTTGA 60.252 60.000 0.00 0.00 0.00 3.18
551 586 1.079490 AGAGGAGAGGTGGTTGATGGA 59.921 52.381 0.00 0.00 0.00 3.41
638 675 0.586802 GGCAGAAACTCGCGTTTTCT 59.413 50.000 23.73 23.73 43.09 2.52
642 679 1.134226 GAAACTCGCGTTTTCTCGGA 58.866 50.000 21.12 0.00 43.09 4.55
674 711 0.963355 TTTTGCCGCGCCTCCTAAAT 60.963 50.000 0.00 0.00 0.00 1.40
675 712 0.963355 TTTGCCGCGCCTCCTAAATT 60.963 50.000 0.00 0.00 0.00 1.82
761 798 3.674528 TGACGGTTATTTTACGGGTCA 57.325 42.857 0.00 0.00 32.97 4.02
800 838 5.069251 TCTGCTAGAGTTGCTCTAATAACCC 59.931 44.000 7.22 0.00 41.74 4.11
814 852 6.346096 TCTAATAACCCGAAGAGTTGGAATG 58.654 40.000 0.00 0.00 26.62 2.67
819 857 1.402968 CCGAAGAGTTGGAATGGCATG 59.597 52.381 0.00 0.00 0.00 4.06
828 866 0.179092 GGAATGGCATGGCAAAGCTC 60.179 55.000 27.04 18.34 0.00 4.09
874 914 5.128827 CCAAGTAATCTGGGCTCAAGTAGTA 59.871 44.000 0.00 0.00 0.00 1.82
1203 1246 1.525077 GAAGCACAACCACGGGACA 60.525 57.895 0.00 0.00 0.00 4.02
1207 1250 2.203294 ACAACCACGGGACAAGCC 60.203 61.111 0.00 0.00 0.00 4.35
1337 1386 2.125552 CCTGTTCTGCGATGGCGA 60.126 61.111 0.00 0.00 44.10 5.54
1338 1387 1.522355 CCTGTTCTGCGATGGCGAT 60.522 57.895 0.00 0.00 44.10 4.58
1339 1388 1.640069 CTGTTCTGCGATGGCGATG 59.360 57.895 0.00 0.00 44.10 3.84
1340 1389 1.769098 CTGTTCTGCGATGGCGATGG 61.769 60.000 0.00 0.00 44.10 3.51
1341 1390 2.896854 TTCTGCGATGGCGATGGC 60.897 61.111 8.75 8.75 44.10 4.40
1344 1393 4.607325 TGCGATGGCGATGGCGAT 62.607 61.111 10.84 0.00 44.10 4.58
1345 1394 4.081030 GCGATGGCGATGGCGATG 62.081 66.667 1.13 0.00 37.76 3.84
1346 1395 3.417224 CGATGGCGATGGCGATGG 61.417 66.667 1.13 0.00 37.76 3.51
1347 1396 3.730761 GATGGCGATGGCGATGGC 61.731 66.667 7.17 7.17 37.76 4.40
1566 1615 3.022914 CGTAAGGATCGGCGCGTC 61.023 66.667 8.43 3.30 0.00 5.19
1567 1616 2.657620 GTAAGGATCGGCGCGTCC 60.658 66.667 19.27 19.27 34.64 4.79
1641 1696 4.310022 TTTGGGGATCCGTTAACTGAAT 57.690 40.909 5.45 0.00 35.24 2.57
1647 1702 5.180271 GGGATCCGTTAACTGAATGTGTTA 58.820 41.667 5.45 0.00 0.00 2.41
1648 1703 5.820947 GGGATCCGTTAACTGAATGTGTTAT 59.179 40.000 5.45 0.00 31.13 1.89
1656 1726 9.878599 CGTTAACTGAATGTGTTATTTCTTCTT 57.121 29.630 3.71 0.00 31.13 2.52
1660 1730 7.588512 ACTGAATGTGTTATTTCTTCTTCAGC 58.411 34.615 8.44 0.00 41.11 4.26
1802 1872 1.227380 GTGCTCTCTACCATGGCGG 60.227 63.158 13.04 4.79 42.50 6.13
1910 1980 2.724358 CGTCAAACGCAAACGGCC 60.724 61.111 0.00 0.00 46.04 6.13
1952 2022 2.432146 TCCTGATCGAACCTGAATCCAG 59.568 50.000 0.00 0.00 40.09 3.86
2043 2114 2.076863 GTGGATCCTTGGTTCTTGACG 58.923 52.381 14.23 0.00 0.00 4.35
2071 2142 5.195185 TGGGTTTTTAATCGGGAAGGATAC 58.805 41.667 0.00 0.00 0.00 2.24
2095 2166 2.096496 GGCCTGATTTTGAGACACGATG 59.904 50.000 0.00 0.00 0.00 3.84
2116 2187 0.253044 CGATCATGTTGGGTCCTGGT 59.747 55.000 0.00 0.00 0.00 4.00
2149 2220 2.341846 TTGCTTTTTGAGACCGTCCT 57.658 45.000 0.00 0.00 0.00 3.85
2150 2221 1.593196 TGCTTTTTGAGACCGTCCTG 58.407 50.000 0.00 0.00 0.00 3.86
2215 2289 9.520204 CTTTTGGGATTAATTAATAGCACACTG 57.480 33.333 10.68 0.00 0.00 3.66
2218 2295 5.476945 GGGATTAATTAATAGCACACTGGGG 59.523 44.000 10.68 0.00 0.00 4.96
2286 2388 4.405358 TGTTGGTTTTCTTGATTGGAAGCT 59.595 37.500 0.00 0.00 0.00 3.74
2340 2442 5.747197 CACTTGGACGTACCTGATTGTATAC 59.253 44.000 0.00 0.00 39.86 1.47
2342 2444 4.539726 TGGACGTACCTGATTGTATACCT 58.460 43.478 0.00 0.00 39.86 3.08
2353 2455 2.561209 TGTATACCTTGCCCTGAGGA 57.439 50.000 0.00 0.00 37.72 3.71
2356 2458 1.898863 ATACCTTGCCCTGAGGATGT 58.101 50.000 0.00 0.00 37.72 3.06
2357 2459 2.561209 TACCTTGCCCTGAGGATGTA 57.439 50.000 0.00 0.00 37.72 2.29
2359 2461 1.282157 ACCTTGCCCTGAGGATGTAAC 59.718 52.381 0.00 0.00 37.72 2.50
2360 2462 1.408822 CCTTGCCCTGAGGATGTAACC 60.409 57.143 0.00 0.00 36.33 2.85
2361 2463 1.281867 CTTGCCCTGAGGATGTAACCA 59.718 52.381 0.00 0.00 33.47 3.67
2362 2464 1.367346 TGCCCTGAGGATGTAACCAA 58.633 50.000 0.00 0.00 33.47 3.67
2363 2465 1.281867 TGCCCTGAGGATGTAACCAAG 59.718 52.381 0.00 0.00 33.47 3.61
2364 2466 2.019156 GCCCTGAGGATGTAACCAAGC 61.019 57.143 0.00 0.00 33.47 4.01
2365 2467 1.561542 CCCTGAGGATGTAACCAAGCT 59.438 52.381 0.00 0.00 33.47 3.74
2366 2468 2.636830 CCTGAGGATGTAACCAAGCTG 58.363 52.381 0.00 0.00 0.00 4.24
2367 2469 2.636830 CTGAGGATGTAACCAAGCTGG 58.363 52.381 0.00 0.00 45.02 4.85
2368 2470 1.340017 TGAGGATGTAACCAAGCTGGC 60.340 52.381 0.00 0.00 42.67 4.85
2369 2471 0.034089 AGGATGTAACCAAGCTGGCC 60.034 55.000 0.00 0.00 42.67 5.36
2370 2472 0.323360 GGATGTAACCAAGCTGGCCA 60.323 55.000 4.71 4.71 42.67 5.36
2371 2473 1.098050 GATGTAACCAAGCTGGCCAG 58.902 55.000 29.34 29.34 42.67 4.85
2388 2490 3.448660 GGCCAGCCTCATTAACAAATCTT 59.551 43.478 0.00 0.00 0.00 2.40
2398 2501 7.489113 CCTCATTAACAAATCTTATGTTGTGCC 59.511 37.037 2.37 0.00 40.95 5.01
2403 2506 4.584325 ACAAATCTTATGTTGTGCCTGTGT 59.416 37.500 0.00 0.00 36.62 3.72
2409 2512 1.761449 TGTTGTGCCTGTGTGATTGT 58.239 45.000 0.00 0.00 0.00 2.71
2415 2518 2.098934 GTGCCTGTGTGATTGTTTGTCA 59.901 45.455 0.00 0.00 0.00 3.58
2416 2519 2.957680 TGCCTGTGTGATTGTTTGTCAT 59.042 40.909 0.00 0.00 0.00 3.06
2417 2520 3.243468 TGCCTGTGTGATTGTTTGTCATG 60.243 43.478 0.00 0.00 0.00 3.07
2418 2521 3.858129 GCCTGTGTGATTGTTTGTCATGG 60.858 47.826 0.00 0.00 0.00 3.66
2419 2522 3.569277 CCTGTGTGATTGTTTGTCATGGA 59.431 43.478 0.00 0.00 0.00 3.41
2420 2523 4.539870 CTGTGTGATTGTTTGTCATGGAC 58.460 43.478 0.00 0.00 0.00 4.02
2421 2524 3.317711 TGTGTGATTGTTTGTCATGGACC 59.682 43.478 0.00 0.00 0.00 4.46
2422 2525 2.551887 TGTGATTGTTTGTCATGGACCG 59.448 45.455 0.00 0.00 0.00 4.79
2423 2526 2.811431 GTGATTGTTTGTCATGGACCGA 59.189 45.455 0.00 0.00 0.00 4.69
2424 2527 3.440173 GTGATTGTTTGTCATGGACCGAT 59.560 43.478 0.00 0.00 0.00 4.18
2425 2528 4.078537 TGATTGTTTGTCATGGACCGATT 58.921 39.130 0.00 0.00 0.00 3.34
2426 2529 5.123186 GTGATTGTTTGTCATGGACCGATTA 59.877 40.000 0.00 0.00 0.00 1.75
2427 2530 5.885352 TGATTGTTTGTCATGGACCGATTAT 59.115 36.000 0.00 0.00 0.00 1.28
2428 2531 5.811399 TTGTTTGTCATGGACCGATTATC 57.189 39.130 0.00 0.00 0.00 1.75
2429 2532 4.837972 TGTTTGTCATGGACCGATTATCA 58.162 39.130 0.00 0.00 0.00 2.15
2430 2533 5.436175 TGTTTGTCATGGACCGATTATCAT 58.564 37.500 0.00 0.00 0.00 2.45
2431 2534 5.885352 TGTTTGTCATGGACCGATTATCATT 59.115 36.000 0.00 0.00 0.00 2.57
2432 2535 6.376864 TGTTTGTCATGGACCGATTATCATTT 59.623 34.615 0.00 0.00 0.00 2.32
2433 2536 7.093988 TGTTTGTCATGGACCGATTATCATTTT 60.094 33.333 0.00 0.00 0.00 1.82
2434 2537 6.618287 TGTCATGGACCGATTATCATTTTC 57.382 37.500 0.00 0.00 0.00 2.29
2435 2538 5.530915 TGTCATGGACCGATTATCATTTTCC 59.469 40.000 0.00 0.00 0.00 3.13
2436 2539 5.765182 GTCATGGACCGATTATCATTTTCCT 59.235 40.000 0.00 0.00 0.00 3.36
2437 2540 6.263168 GTCATGGACCGATTATCATTTTCCTT 59.737 38.462 0.00 0.00 0.00 3.36
2438 2541 6.262944 TCATGGACCGATTATCATTTTCCTTG 59.737 38.462 0.00 0.00 0.00 3.61
2439 2542 5.505780 TGGACCGATTATCATTTTCCTTGT 58.494 37.500 0.00 0.00 0.00 3.16
2440 2543 5.356751 TGGACCGATTATCATTTTCCTTGTG 59.643 40.000 0.00 0.00 0.00 3.33
2441 2544 5.248870 ACCGATTATCATTTTCCTTGTGC 57.751 39.130 0.00 0.00 0.00 4.57
2442 2545 4.097892 ACCGATTATCATTTTCCTTGTGCC 59.902 41.667 0.00 0.00 0.00 5.01
2443 2546 4.339247 CCGATTATCATTTTCCTTGTGCCT 59.661 41.667 0.00 0.00 0.00 4.75
2444 2547 5.506317 CCGATTATCATTTTCCTTGTGCCTC 60.506 44.000 0.00 0.00 0.00 4.70
2445 2548 5.066375 CGATTATCATTTTCCTTGTGCCTCA 59.934 40.000 0.00 0.00 0.00 3.86
2446 2549 6.238842 CGATTATCATTTTCCTTGTGCCTCAT 60.239 38.462 0.00 0.00 0.00 2.90
2447 2550 6.855763 TTATCATTTTCCTTGTGCCTCATT 57.144 33.333 0.00 0.00 0.00 2.57
2448 2551 4.789012 TCATTTTCCTTGTGCCTCATTC 57.211 40.909 0.00 0.00 0.00 2.67
2449 2552 3.191162 TCATTTTCCTTGTGCCTCATTCG 59.809 43.478 0.00 0.00 0.00 3.34
2450 2553 1.533625 TTTCCTTGTGCCTCATTCGG 58.466 50.000 0.00 0.00 0.00 4.30
2451 2554 0.400213 TTCCTTGTGCCTCATTCGGT 59.600 50.000 0.00 0.00 0.00 4.69
2452 2555 0.400213 TCCTTGTGCCTCATTCGGTT 59.600 50.000 0.00 0.00 0.00 4.44
2453 2556 1.202879 TCCTTGTGCCTCATTCGGTTT 60.203 47.619 0.00 0.00 0.00 3.27
2454 2557 1.068333 CCTTGTGCCTCATTCGGTTTG 60.068 52.381 0.00 0.00 0.00 2.93
2455 2558 0.958091 TTGTGCCTCATTCGGTTTGG 59.042 50.000 0.00 0.00 0.00 3.28
2456 2559 0.109532 TGTGCCTCATTCGGTTTGGA 59.890 50.000 0.00 0.00 0.00 3.53
2457 2560 0.804989 GTGCCTCATTCGGTTTGGAG 59.195 55.000 0.00 0.00 0.00 3.86
2462 2565 3.831715 CTCATTCGGTTTGGAGGAAAC 57.168 47.619 0.00 0.00 42.97 2.78
2486 2589 9.990868 AACCAAAATATAAGAATTAGGAGTGGT 57.009 29.630 0.00 0.00 34.91 4.16
2504 2607 9.213777 AGGAGTGGTATAAGAATTTGATAGTCA 57.786 33.333 0.00 0.00 0.00 3.41
2522 2625 9.605275 TGATAGTCATCCTAAGAAATTGTCTTG 57.395 33.333 0.00 0.00 46.48 3.02
2523 2626 6.749923 AGTCATCCTAAGAAATTGTCTTGC 57.250 37.500 0.00 0.00 46.48 4.01
2524 2627 5.649831 AGTCATCCTAAGAAATTGTCTTGCC 59.350 40.000 0.00 0.00 46.48 4.52
2525 2628 5.649831 GTCATCCTAAGAAATTGTCTTGCCT 59.350 40.000 0.00 0.00 46.48 4.75
2526 2629 5.882557 TCATCCTAAGAAATTGTCTTGCCTC 59.117 40.000 0.00 0.00 46.48 4.70
2527 2630 4.253685 TCCTAAGAAATTGTCTTGCCTCG 58.746 43.478 0.00 0.00 46.48 4.63
2528 2631 4.003648 CCTAAGAAATTGTCTTGCCTCGT 58.996 43.478 0.00 0.00 46.48 4.18
2529 2632 4.455877 CCTAAGAAATTGTCTTGCCTCGTT 59.544 41.667 0.00 0.00 46.48 3.85
2530 2633 4.489679 AAGAAATTGTCTTGCCTCGTTC 57.510 40.909 0.00 0.00 45.29 3.95
2531 2634 2.814336 AGAAATTGTCTTGCCTCGTTCC 59.186 45.455 0.00 0.00 29.66 3.62
2532 2635 2.568623 AATTGTCTTGCCTCGTTCCT 57.431 45.000 0.00 0.00 0.00 3.36
2533 2636 3.695830 AATTGTCTTGCCTCGTTCCTA 57.304 42.857 0.00 0.00 0.00 2.94
2534 2637 2.450609 TTGTCTTGCCTCGTTCCTAC 57.549 50.000 0.00 0.00 0.00 3.18
2550 2653 7.644917 CGTTCCTACGCATAAAATAAGTTTG 57.355 36.000 0.00 0.00 41.41 2.93
2551 2654 7.457868 CGTTCCTACGCATAAAATAAGTTTGA 58.542 34.615 0.00 0.00 41.41 2.69
2552 2655 7.958567 CGTTCCTACGCATAAAATAAGTTTGAA 59.041 33.333 0.00 0.00 41.41 2.69
2553 2656 9.274065 GTTCCTACGCATAAAATAAGTTTGAAG 57.726 33.333 0.00 0.00 0.00 3.02
2554 2657 8.556213 TCCTACGCATAAAATAAGTTTGAAGT 57.444 30.769 0.00 0.00 0.00 3.01
2555 2658 9.656040 TCCTACGCATAAAATAAGTTTGAAGTA 57.344 29.630 0.00 0.00 0.00 2.24
2556 2659 9.916397 CCTACGCATAAAATAAGTTTGAAGTAG 57.084 33.333 0.00 0.00 31.47 2.57
2559 2662 9.988350 ACGCATAAAATAAGTTTGAAGTAGATG 57.012 29.630 0.00 0.00 0.00 2.90
2560 2663 9.988350 CGCATAAAATAAGTTTGAAGTAGATGT 57.012 29.630 0.00 0.00 0.00 3.06
2572 2675 9.262358 GTTTGAAGTAGATGTGTATATTCCTCC 57.738 37.037 0.00 0.00 0.00 4.30
2573 2676 8.547481 TTGAAGTAGATGTGTATATTCCTCCA 57.453 34.615 0.00 0.00 0.00 3.86
2574 2677 8.547481 TGAAGTAGATGTGTATATTCCTCCAA 57.453 34.615 0.00 0.00 0.00 3.53
2575 2678 8.988060 TGAAGTAGATGTGTATATTCCTCCAAA 58.012 33.333 0.00 0.00 0.00 3.28
2576 2679 9.832445 GAAGTAGATGTGTATATTCCTCCAAAA 57.168 33.333 0.00 0.00 0.00 2.44
2606 2709 8.934023 AGGAAATGAATAGTGTTCCTACAAAA 57.066 30.769 1.98 0.00 46.36 2.44
2607 2710 9.533831 AGGAAATGAATAGTGTTCCTACAAAAT 57.466 29.630 1.98 0.00 46.36 1.82
2611 2714 7.696992 TGAATAGTGTTCCTACAAAATTCCC 57.303 36.000 0.00 0.00 37.12 3.97
2612 2715 6.373216 TGAATAGTGTTCCTACAAAATTCCCG 59.627 38.462 0.00 0.00 37.12 5.14
2613 2716 4.094830 AGTGTTCCTACAAAATTCCCGT 57.905 40.909 0.00 0.00 35.69 5.28
2614 2717 5.231702 AGTGTTCCTACAAAATTCCCGTA 57.768 39.130 0.00 0.00 35.69 4.02
2615 2718 4.999311 AGTGTTCCTACAAAATTCCCGTAC 59.001 41.667 0.00 0.00 35.69 3.67
2616 2719 3.995705 TGTTCCTACAAAATTCCCGTACG 59.004 43.478 8.69 8.69 0.00 3.67
2617 2720 2.620242 TCCTACAAAATTCCCGTACGC 58.380 47.619 10.49 0.00 0.00 4.42
2618 2721 1.325338 CCTACAAAATTCCCGTACGCG 59.675 52.381 10.49 3.53 37.95 6.01
2619 2722 1.994779 CTACAAAATTCCCGTACGCGT 59.005 47.619 19.17 19.17 36.15 6.01
2620 2723 1.228533 ACAAAATTCCCGTACGCGTT 58.771 45.000 20.78 0.80 36.15 4.84
2621 2724 1.195222 ACAAAATTCCCGTACGCGTTC 59.805 47.619 20.78 12.48 36.15 3.95
2622 2725 0.798159 AAAATTCCCGTACGCGTTCC 59.202 50.000 20.78 7.94 36.15 3.62
2623 2726 1.020861 AAATTCCCGTACGCGTTCCC 61.021 55.000 20.78 4.98 36.15 3.97
2624 2727 1.891722 AATTCCCGTACGCGTTCCCT 61.892 55.000 20.78 0.00 36.15 4.20
2625 2728 1.037030 ATTCCCGTACGCGTTCCCTA 61.037 55.000 20.78 0.00 36.15 3.53
2626 2729 1.933115 TTCCCGTACGCGTTCCCTAC 61.933 60.000 20.78 8.28 36.15 3.18
2627 2730 2.699768 CCCGTACGCGTTCCCTACA 61.700 63.158 20.78 0.00 36.15 2.74
2628 2731 1.212490 CCGTACGCGTTCCCTACAA 59.788 57.895 20.78 0.00 36.15 2.41
2629 2732 0.388391 CCGTACGCGTTCCCTACAAA 60.388 55.000 20.78 0.00 36.15 2.83
2630 2733 0.710017 CGTACGCGTTCCCTACAAAC 59.290 55.000 20.78 4.77 0.00 2.93
2631 2734 1.070821 GTACGCGTTCCCTACAAACC 58.929 55.000 20.78 0.00 0.00 3.27
2632 2735 0.388391 TACGCGTTCCCTACAAACCG 60.388 55.000 20.78 0.00 0.00 4.44
2633 2736 1.373246 CGCGTTCCCTACAAACCGA 60.373 57.895 0.00 0.00 0.00 4.69
2634 2737 0.945265 CGCGTTCCCTACAAACCGAA 60.945 55.000 0.00 0.00 0.00 4.30
2635 2738 1.445871 GCGTTCCCTACAAACCGAAT 58.554 50.000 0.00 0.00 0.00 3.34
2636 2739 1.129811 GCGTTCCCTACAAACCGAATG 59.870 52.381 0.00 0.00 0.00 2.67
2637 2740 1.129811 CGTTCCCTACAAACCGAATGC 59.870 52.381 0.00 0.00 0.00 3.56
2638 2741 2.156098 GTTCCCTACAAACCGAATGCA 58.844 47.619 0.00 0.00 0.00 3.96
2639 2742 2.752903 GTTCCCTACAAACCGAATGCAT 59.247 45.455 0.00 0.00 0.00 3.96
2640 2743 2.639065 TCCCTACAAACCGAATGCATC 58.361 47.619 0.00 0.00 0.00 3.91
2641 2744 2.238646 TCCCTACAAACCGAATGCATCT 59.761 45.455 0.00 0.00 0.00 2.90
2642 2745 3.452990 TCCCTACAAACCGAATGCATCTA 59.547 43.478 0.00 0.00 0.00 1.98
2643 2746 4.102524 TCCCTACAAACCGAATGCATCTAT 59.897 41.667 0.00 0.00 0.00 1.98
2644 2747 5.305902 TCCCTACAAACCGAATGCATCTATA 59.694 40.000 0.00 0.00 0.00 1.31
2645 2748 5.639506 CCCTACAAACCGAATGCATCTATAG 59.360 44.000 0.00 0.00 0.00 1.31
2646 2749 6.455647 CCTACAAACCGAATGCATCTATAGA 58.544 40.000 4.57 4.57 0.00 1.98
2647 2750 6.929049 CCTACAAACCGAATGCATCTATAGAA 59.071 38.462 6.52 0.00 0.00 2.10
2648 2751 7.441157 CCTACAAACCGAATGCATCTATAGAAA 59.559 37.037 6.52 0.00 0.00 2.52
2649 2752 7.624360 ACAAACCGAATGCATCTATAGAAAA 57.376 32.000 6.52 0.00 0.00 2.29
2650 2753 8.050778 ACAAACCGAATGCATCTATAGAAAAA 57.949 30.769 6.52 0.00 0.00 1.94
2651 2754 8.686334 ACAAACCGAATGCATCTATAGAAAAAT 58.314 29.630 6.52 0.00 0.00 1.82
2652 2755 9.520204 CAAACCGAATGCATCTATAGAAAAATT 57.480 29.630 6.52 6.69 0.00 1.82
2654 2757 9.736023 AACCGAATGCATCTATAGAAAAATTTC 57.264 29.630 6.52 6.22 37.45 2.17
2655 2758 8.352942 ACCGAATGCATCTATAGAAAAATTTCC 58.647 33.333 6.52 0.00 37.92 3.13
2656 2759 8.571336 CCGAATGCATCTATAGAAAAATTTCCT 58.429 33.333 6.52 0.00 37.92 3.36
2660 2763 8.378172 TGCATCTATAGAAAAATTTCCTACGG 57.622 34.615 6.52 0.00 37.92 4.02
2661 2764 8.208224 TGCATCTATAGAAAAATTTCCTACGGA 58.792 33.333 6.52 0.37 37.92 4.69
2662 2765 9.052759 GCATCTATAGAAAAATTTCCTACGGAA 57.947 33.333 6.52 0.00 40.27 4.30
2665 2768 9.774413 TCTATAGAAAAATTTCCTACGGAATCC 57.226 33.333 0.00 0.00 41.71 3.01
2666 2769 9.780186 CTATAGAAAAATTTCCTACGGAATCCT 57.220 33.333 0.00 0.00 41.71 3.24
2668 2771 7.158099 AGAAAAATTTCCTACGGAATCCTTG 57.842 36.000 0.00 0.00 41.71 3.61
2669 2772 6.719829 AGAAAAATTTCCTACGGAATCCTTGT 59.280 34.615 0.00 0.00 41.71 3.16
2670 2773 6.911250 AAAATTTCCTACGGAATCCTTGTT 57.089 33.333 0.00 0.00 41.71 2.83
2671 2774 6.510879 AAATTTCCTACGGAATCCTTGTTC 57.489 37.500 0.00 0.00 41.71 3.18
2672 2775 3.622166 TTCCTACGGAATCCTTGTTCC 57.378 47.619 0.00 0.00 43.42 3.62
2673 2776 2.829023 TCCTACGGAATCCTTGTTCCT 58.171 47.619 0.00 0.00 44.43 3.36
2674 2777 3.985127 TCCTACGGAATCCTTGTTCCTA 58.015 45.455 0.00 0.00 44.43 2.94
2675 2778 4.553678 TCCTACGGAATCCTTGTTCCTAT 58.446 43.478 0.00 0.00 44.43 2.57
2676 2779 4.344102 TCCTACGGAATCCTTGTTCCTATG 59.656 45.833 0.00 0.00 44.43 2.23
2677 2780 4.101119 CCTACGGAATCCTTGTTCCTATGT 59.899 45.833 0.00 0.00 44.43 2.29
2678 2781 4.569719 ACGGAATCCTTGTTCCTATGTT 57.430 40.909 0.00 0.00 44.43 2.71
2679 2782 4.918588 ACGGAATCCTTGTTCCTATGTTT 58.081 39.130 0.00 0.00 44.43 2.83
2680 2783 5.321927 ACGGAATCCTTGTTCCTATGTTTT 58.678 37.500 0.00 0.00 44.43 2.43
2681 2784 5.773176 ACGGAATCCTTGTTCCTATGTTTTT 59.227 36.000 0.00 0.00 44.43 1.94
2682 2785 6.072119 ACGGAATCCTTGTTCCTATGTTTTTC 60.072 38.462 0.00 0.00 44.43 2.29
2683 2786 6.625081 CGGAATCCTTGTTCCTATGTTTTTCC 60.625 42.308 0.00 0.00 44.43 3.13
2684 2787 6.351033 GGAATCCTTGTTCCTATGTTTTTCCC 60.351 42.308 0.00 0.00 43.49 3.97
2685 2788 5.068215 TCCTTGTTCCTATGTTTTTCCCA 57.932 39.130 0.00 0.00 0.00 4.37
2686 2789 5.650283 TCCTTGTTCCTATGTTTTTCCCAT 58.350 37.500 0.00 0.00 0.00 4.00
2687 2790 6.795590 TCCTTGTTCCTATGTTTTTCCCATA 58.204 36.000 0.00 0.00 0.00 2.74
2688 2791 6.889722 TCCTTGTTCCTATGTTTTTCCCATAG 59.110 38.462 0.00 0.00 40.85 2.23
2689 2792 6.889722 CCTTGTTCCTATGTTTTTCCCATAGA 59.110 38.462 8.59 0.00 42.82 1.98
2690 2793 7.396055 CCTTGTTCCTATGTTTTTCCCATAGAA 59.604 37.037 8.59 0.70 42.82 2.10
2691 2794 8.713708 TTGTTCCTATGTTTTTCCCATAGAAA 57.286 30.769 8.59 0.00 42.82 2.52
2692 2795 8.893563 TGTTCCTATGTTTTTCCCATAGAAAT 57.106 30.769 8.59 0.00 43.93 2.17
2693 2796 8.966868 TGTTCCTATGTTTTTCCCATAGAAATC 58.033 33.333 8.59 0.00 43.93 2.17
2694 2797 8.414003 GTTCCTATGTTTTTCCCATAGAAATCC 58.586 37.037 8.59 0.00 43.93 3.01
2695 2798 7.882755 TCCTATGTTTTTCCCATAGAAATCCT 58.117 34.615 8.59 0.00 43.93 3.24
2696 2799 7.998964 TCCTATGTTTTTCCCATAGAAATCCTC 59.001 37.037 8.59 0.00 43.93 3.71
2697 2800 7.231519 CCTATGTTTTTCCCATAGAAATCCTCC 59.768 40.741 8.59 0.00 43.93 4.30
2698 2801 5.898120 TGTTTTTCCCATAGAAATCCTCCA 58.102 37.500 0.00 0.00 43.93 3.86
2699 2802 6.318913 TGTTTTTCCCATAGAAATCCTCCAA 58.681 36.000 0.00 0.00 43.93 3.53
2700 2803 6.784969 TGTTTTTCCCATAGAAATCCTCCAAA 59.215 34.615 0.00 0.00 43.93 3.28
2701 2804 6.850752 TTTTCCCATAGAAATCCTCCAAAC 57.149 37.500 0.00 0.00 43.93 2.93
2702 2805 4.519906 TCCCATAGAAATCCTCCAAACC 57.480 45.455 0.00 0.00 0.00 3.27
2703 2806 3.855599 TCCCATAGAAATCCTCCAAACCA 59.144 43.478 0.00 0.00 0.00 3.67
2704 2807 4.293634 TCCCATAGAAATCCTCCAAACCAA 59.706 41.667 0.00 0.00 0.00 3.67
2705 2808 5.022787 CCCATAGAAATCCTCCAAACCAAA 58.977 41.667 0.00 0.00 0.00 3.28
2706 2809 5.662657 CCCATAGAAATCCTCCAAACCAAAT 59.337 40.000 0.00 0.00 0.00 2.32
2707 2810 6.407299 CCCATAGAAATCCTCCAAACCAAATG 60.407 42.308 0.00 0.00 0.00 2.32
2708 2811 6.380846 CCATAGAAATCCTCCAAACCAAATGA 59.619 38.462 0.00 0.00 0.00 2.57
2709 2812 5.990120 AGAAATCCTCCAAACCAAATGAG 57.010 39.130 0.00 0.00 0.00 2.90
2710 2813 4.774200 AGAAATCCTCCAAACCAAATGAGG 59.226 41.667 0.00 0.00 44.69 3.86
2711 2814 1.923356 TCCTCCAAACCAAATGAGGC 58.077 50.000 0.00 0.00 43.33 4.70
2712 2815 0.897621 CCTCCAAACCAAATGAGGCC 59.102 55.000 0.00 0.00 38.12 5.19
2713 2816 1.550869 CCTCCAAACCAAATGAGGCCT 60.551 52.381 3.86 3.86 38.12 5.19
2714 2817 2.250924 CTCCAAACCAAATGAGGCCTT 58.749 47.619 6.77 0.00 0.00 4.35
2715 2818 3.430453 CTCCAAACCAAATGAGGCCTTA 58.570 45.455 6.77 1.66 0.00 2.69
2716 2819 3.831911 CTCCAAACCAAATGAGGCCTTAA 59.168 43.478 6.77 0.00 0.00 1.85
2717 2820 4.227197 TCCAAACCAAATGAGGCCTTAAA 58.773 39.130 6.77 0.00 0.00 1.52
2718 2821 4.656112 TCCAAACCAAATGAGGCCTTAAAA 59.344 37.500 6.77 0.00 0.00 1.52
2719 2822 5.309282 TCCAAACCAAATGAGGCCTTAAAAT 59.691 36.000 6.77 0.00 0.00 1.82
2720 2823 6.498651 TCCAAACCAAATGAGGCCTTAAAATA 59.501 34.615 6.77 0.00 0.00 1.40
2721 2824 7.181845 TCCAAACCAAATGAGGCCTTAAAATAT 59.818 33.333 6.77 0.00 0.00 1.28
2722 2825 7.828717 CCAAACCAAATGAGGCCTTAAAATATT 59.171 33.333 6.77 0.00 0.00 1.28
2723 2826 8.882736 CAAACCAAATGAGGCCTTAAAATATTC 58.117 33.333 6.77 0.00 0.00 1.75
2724 2827 7.978099 ACCAAATGAGGCCTTAAAATATTCT 57.022 32.000 6.77 0.00 0.00 2.40
2725 2828 9.487442 AACCAAATGAGGCCTTAAAATATTCTA 57.513 29.630 6.77 0.00 0.00 2.10
2726 2829 9.136323 ACCAAATGAGGCCTTAAAATATTCTAG 57.864 33.333 6.77 0.00 0.00 2.43
2727 2830 9.136323 CCAAATGAGGCCTTAAAATATTCTAGT 57.864 33.333 6.77 0.00 0.00 2.57
2746 2849 8.932945 TTCTAGTAACAAGTATCATGAGCAAG 57.067 34.615 0.09 0.00 0.00 4.01
2747 2850 8.293699 TCTAGTAACAAGTATCATGAGCAAGA 57.706 34.615 0.09 0.00 0.00 3.02
2748 2851 8.918116 TCTAGTAACAAGTATCATGAGCAAGAT 58.082 33.333 0.09 0.00 0.00 2.40
2749 2852 9.539825 CTAGTAACAAGTATCATGAGCAAGATT 57.460 33.333 0.09 0.00 0.00 2.40
2750 2853 8.798859 AGTAACAAGTATCATGAGCAAGATTT 57.201 30.769 0.09 0.00 0.00 2.17
2751 2854 9.236006 AGTAACAAGTATCATGAGCAAGATTTT 57.764 29.630 0.09 0.00 0.00 1.82
2752 2855 9.495754 GTAACAAGTATCATGAGCAAGATTTTC 57.504 33.333 0.09 0.00 0.00 2.29
2753 2856 7.934855 ACAAGTATCATGAGCAAGATTTTCT 57.065 32.000 0.09 0.00 0.00 2.52
2754 2857 9.453572 AACAAGTATCATGAGCAAGATTTTCTA 57.546 29.630 0.09 0.00 0.00 2.10
2755 2858 9.453572 ACAAGTATCATGAGCAAGATTTTCTAA 57.546 29.630 0.09 0.00 0.00 2.10
2756 2859 9.932699 CAAGTATCATGAGCAAGATTTTCTAAG 57.067 33.333 0.09 0.00 0.00 2.18
2757 2860 9.896645 AAGTATCATGAGCAAGATTTTCTAAGA 57.103 29.630 0.09 0.00 0.00 2.10
2758 2861 9.545105 AGTATCATGAGCAAGATTTTCTAAGAG 57.455 33.333 0.09 0.00 0.00 2.85
2759 2862 7.804843 ATCATGAGCAAGATTTTCTAAGAGG 57.195 36.000 0.09 0.00 0.00 3.69
2760 2863 5.587844 TCATGAGCAAGATTTTCTAAGAGGC 59.412 40.000 0.00 0.00 0.00 4.70
2761 2864 4.910195 TGAGCAAGATTTTCTAAGAGGCA 58.090 39.130 0.00 0.00 0.00 4.75
2762 2865 5.316167 TGAGCAAGATTTTCTAAGAGGCAA 58.684 37.500 0.00 0.00 0.00 4.52
2763 2866 5.182001 TGAGCAAGATTTTCTAAGAGGCAAC 59.818 40.000 0.00 0.00 0.00 4.17
2764 2867 5.072741 AGCAAGATTTTCTAAGAGGCAACA 58.927 37.500 0.00 0.00 41.41 3.33
2765 2868 5.713861 AGCAAGATTTTCTAAGAGGCAACAT 59.286 36.000 0.00 0.00 41.41 2.71
2766 2869 6.886459 AGCAAGATTTTCTAAGAGGCAACATA 59.114 34.615 0.00 0.00 41.41 2.29
2767 2870 7.394359 AGCAAGATTTTCTAAGAGGCAACATAA 59.606 33.333 0.00 0.00 41.41 1.90
2768 2871 8.028938 GCAAGATTTTCTAAGAGGCAACATAAA 58.971 33.333 0.00 0.00 41.41 1.40
2797 2900 7.815840 TTTAAGAGTTGATGGTTGTTCATGA 57.184 32.000 0.00 0.00 0.00 3.07
2798 2901 8.408043 TTTAAGAGTTGATGGTTGTTCATGAT 57.592 30.769 0.00 0.00 0.00 2.45
2799 2902 5.892160 AGAGTTGATGGTTGTTCATGATG 57.108 39.130 0.00 0.00 0.00 3.07
2800 2903 4.157289 AGAGTTGATGGTTGTTCATGATGC 59.843 41.667 0.00 0.00 0.00 3.91
2801 2904 3.827876 AGTTGATGGTTGTTCATGATGCA 59.172 39.130 0.00 0.00 0.00 3.96
2802 2905 4.082408 AGTTGATGGTTGTTCATGATGCAG 60.082 41.667 0.00 0.00 0.00 4.41
2803 2906 3.688235 TGATGGTTGTTCATGATGCAGA 58.312 40.909 0.00 0.00 0.00 4.26
2804 2907 4.080687 TGATGGTTGTTCATGATGCAGAA 58.919 39.130 0.00 0.00 0.00 3.02
2805 2908 4.157105 TGATGGTTGTTCATGATGCAGAAG 59.843 41.667 0.00 0.00 0.00 2.85
2806 2909 3.753815 TGGTTGTTCATGATGCAGAAGA 58.246 40.909 0.00 0.00 0.00 2.87
2807 2910 3.754850 TGGTTGTTCATGATGCAGAAGAG 59.245 43.478 0.00 0.00 0.00 2.85
2808 2911 4.005650 GGTTGTTCATGATGCAGAAGAGA 58.994 43.478 0.00 0.00 0.00 3.10
2809 2912 4.094590 GGTTGTTCATGATGCAGAAGAGAG 59.905 45.833 0.00 0.00 0.00 3.20
2810 2913 3.870274 TGTTCATGATGCAGAAGAGAGG 58.130 45.455 0.00 0.00 0.00 3.69
2811 2914 3.262660 TGTTCATGATGCAGAAGAGAGGT 59.737 43.478 0.00 0.00 0.00 3.85
2812 2915 3.815856 TCATGATGCAGAAGAGAGGTC 57.184 47.619 0.00 0.00 0.00 3.85
2813 2916 2.433604 TCATGATGCAGAAGAGAGGTCC 59.566 50.000 0.00 0.00 0.00 4.46
2814 2917 0.820226 TGATGCAGAAGAGAGGTCCG 59.180 55.000 0.00 0.00 0.00 4.79
2815 2918 1.107114 GATGCAGAAGAGAGGTCCGA 58.893 55.000 0.00 0.00 0.00 4.55
2816 2919 1.478510 GATGCAGAAGAGAGGTCCGAA 59.521 52.381 0.00 0.00 0.00 4.30
2817 2920 0.891373 TGCAGAAGAGAGGTCCGAAG 59.109 55.000 0.00 0.00 0.00 3.79
2818 2921 0.459411 GCAGAAGAGAGGTCCGAAGC 60.459 60.000 0.00 0.00 0.00 3.86
2819 2922 1.181786 CAGAAGAGAGGTCCGAAGCT 58.818 55.000 0.00 0.00 35.46 3.74
2820 2923 2.370349 CAGAAGAGAGGTCCGAAGCTA 58.630 52.381 0.00 0.00 32.07 3.32
2821 2924 2.098443 CAGAAGAGAGGTCCGAAGCTAC 59.902 54.545 0.00 0.00 32.07 3.58
2822 2925 2.093106 GAAGAGAGGTCCGAAGCTACA 58.907 52.381 0.00 0.00 32.07 2.74
2823 2926 2.445682 AGAGAGGTCCGAAGCTACAT 57.554 50.000 0.00 0.00 32.07 2.29
2824 2927 2.741145 AGAGAGGTCCGAAGCTACATT 58.259 47.619 0.00 0.00 32.07 2.71
2825 2928 2.428890 AGAGAGGTCCGAAGCTACATTG 59.571 50.000 0.00 0.00 32.07 2.82
2826 2929 1.134670 AGAGGTCCGAAGCTACATTGC 60.135 52.381 0.00 0.00 32.07 3.56
2827 2930 0.905357 AGGTCCGAAGCTACATTGCT 59.095 50.000 0.00 0.00 46.40 3.91
2838 2941 5.520376 AGCTACATTGCTTGAGTTTTTGT 57.480 34.783 0.00 0.00 40.93 2.83
2839 2942 5.284079 AGCTACATTGCTTGAGTTTTTGTG 58.716 37.500 0.00 0.00 40.93 3.33
2840 2943 5.043248 GCTACATTGCTTGAGTTTTTGTGT 58.957 37.500 0.00 0.00 0.00 3.72
2841 2944 5.519927 GCTACATTGCTTGAGTTTTTGTGTT 59.480 36.000 0.00 0.00 0.00 3.32
2842 2945 6.291796 GCTACATTGCTTGAGTTTTTGTGTTC 60.292 38.462 0.00 0.00 0.00 3.18
2843 2946 5.723295 ACATTGCTTGAGTTTTTGTGTTCT 58.277 33.333 0.00 0.00 0.00 3.01
2844 2947 5.577945 ACATTGCTTGAGTTTTTGTGTTCTG 59.422 36.000 0.00 0.00 0.00 3.02
2845 2948 5.384063 TTGCTTGAGTTTTTGTGTTCTGA 57.616 34.783 0.00 0.00 0.00 3.27
2846 2949 5.384063 TGCTTGAGTTTTTGTGTTCTGAA 57.616 34.783 0.00 0.00 0.00 3.02
2847 2950 5.401550 TGCTTGAGTTTTTGTGTTCTGAAG 58.598 37.500 0.00 0.00 0.00 3.02
2848 2951 5.182950 TGCTTGAGTTTTTGTGTTCTGAAGA 59.817 36.000 0.00 0.00 0.00 2.87
2849 2952 5.513141 GCTTGAGTTTTTGTGTTCTGAAGAC 59.487 40.000 10.47 10.47 0.00 3.01
2850 2953 6.567687 TTGAGTTTTTGTGTTCTGAAGACA 57.432 33.333 15.46 15.46 32.25 3.41
2851 2954 6.567687 TGAGTTTTTGTGTTCTGAAGACAA 57.432 33.333 24.03 24.03 42.12 3.18
2852 2955 7.156876 TGAGTTTTTGTGTTCTGAAGACAAT 57.843 32.000 26.99 16.04 43.11 2.71
2853 2956 7.601856 TGAGTTTTTGTGTTCTGAAGACAATT 58.398 30.769 26.99 16.12 43.11 2.32
2854 2957 8.087750 TGAGTTTTTGTGTTCTGAAGACAATTT 58.912 29.630 26.99 15.85 43.11 1.82
2855 2958 9.567848 GAGTTTTTGTGTTCTGAAGACAATTTA 57.432 29.630 26.99 14.27 43.11 1.40
2856 2959 9.573133 AGTTTTTGTGTTCTGAAGACAATTTAG 57.427 29.630 26.99 0.00 43.11 1.85
2857 2960 9.353999 GTTTTTGTGTTCTGAAGACAATTTAGT 57.646 29.630 26.99 0.00 43.11 2.24
2859 2962 9.997482 TTTTGTGTTCTGAAGACAATTTAGTAC 57.003 29.630 26.99 0.00 43.11 2.73
2860 2963 8.725405 TTGTGTTCTGAAGACAATTTAGTACA 57.275 30.769 24.03 4.35 39.41 2.90
2861 2964 8.902540 TGTGTTCTGAAGACAATTTAGTACAT 57.097 30.769 16.87 0.00 31.04 2.29
2862 2965 8.773645 TGTGTTCTGAAGACAATTTAGTACATG 58.226 33.333 16.87 0.00 31.04 3.21
2863 2966 8.230486 GTGTTCTGAAGACAATTTAGTACATGG 58.770 37.037 12.28 0.00 0.00 3.66
2864 2967 7.390440 TGTTCTGAAGACAATTTAGTACATGGG 59.610 37.037 0.00 0.00 0.00 4.00
2865 2968 6.414732 TCTGAAGACAATTTAGTACATGGGG 58.585 40.000 0.00 0.00 0.00 4.96
2866 2969 6.214615 TCTGAAGACAATTTAGTACATGGGGA 59.785 38.462 0.00 0.00 0.00 4.81
2867 2970 6.414732 TGAAGACAATTTAGTACATGGGGAG 58.585 40.000 0.00 0.00 0.00 4.30
2868 2971 5.373812 AGACAATTTAGTACATGGGGAGG 57.626 43.478 0.00 0.00 0.00 4.30
2869 2972 5.036916 AGACAATTTAGTACATGGGGAGGA 58.963 41.667 0.00 0.00 0.00 3.71
2870 2973 5.131142 AGACAATTTAGTACATGGGGAGGAG 59.869 44.000 0.00 0.00 0.00 3.69
2871 2974 4.137543 CAATTTAGTACATGGGGAGGAGC 58.862 47.826 0.00 0.00 0.00 4.70
2872 2975 1.410004 TTAGTACATGGGGAGGAGCG 58.590 55.000 0.00 0.00 0.00 5.03
2873 2976 0.260816 TAGTACATGGGGAGGAGCGT 59.739 55.000 0.00 0.00 0.00 5.07
2874 2977 0.617820 AGTACATGGGGAGGAGCGTT 60.618 55.000 0.00 0.00 0.00 4.84
2875 2978 0.179081 GTACATGGGGAGGAGCGTTC 60.179 60.000 0.00 0.00 0.00 3.95
2876 2979 1.672854 TACATGGGGAGGAGCGTTCG 61.673 60.000 0.00 0.00 0.00 3.95
2877 2980 2.683933 ATGGGGAGGAGCGTTCGT 60.684 61.111 0.00 0.00 0.00 3.85
2878 2981 1.380785 ATGGGGAGGAGCGTTCGTA 60.381 57.895 0.00 0.00 0.00 3.43
2879 2982 1.392710 ATGGGGAGGAGCGTTCGTAG 61.393 60.000 0.00 0.00 0.00 3.51
2880 2983 2.050934 GGGGAGGAGCGTTCGTAGT 61.051 63.158 0.00 0.00 0.00 2.73
2881 2984 1.432657 GGGAGGAGCGTTCGTAGTC 59.567 63.158 0.00 0.00 0.00 2.59
2882 2985 1.062206 GGAGGAGCGTTCGTAGTCG 59.938 63.158 0.00 0.00 38.55 4.18
2883 2986 1.583194 GAGGAGCGTTCGTAGTCGC 60.583 63.158 0.00 1.28 46.66 5.19
2887 2990 3.236137 GCGTTCGTAGTCGCGTCC 61.236 66.667 5.77 0.00 40.63 4.79
2888 2991 2.477845 CGTTCGTAGTCGCGTCCT 59.522 61.111 5.77 6.12 36.96 3.85
2889 2992 1.709760 CGTTCGTAGTCGCGTCCTA 59.290 57.895 5.77 5.01 36.96 2.94
2890 2993 0.095245 CGTTCGTAGTCGCGTCCTAA 59.905 55.000 5.77 0.00 36.96 2.69
2891 2994 1.807738 GTTCGTAGTCGCGTCCTAAG 58.192 55.000 5.77 10.24 36.96 2.18
2892 2995 0.729116 TTCGTAGTCGCGTCCTAAGG 59.271 55.000 5.77 4.11 36.96 2.69
2893 2996 0.108186 TCGTAGTCGCGTCCTAAGGA 60.108 55.000 5.77 6.29 36.96 3.36
2894 2997 0.942962 CGTAGTCGCGTCCTAAGGAT 59.057 55.000 5.77 0.00 32.73 3.24
2895 2998 2.138320 CGTAGTCGCGTCCTAAGGATA 58.862 52.381 5.77 0.00 32.73 2.59
2896 2999 2.740981 CGTAGTCGCGTCCTAAGGATAT 59.259 50.000 5.77 0.00 32.73 1.63
2897 3000 3.928992 CGTAGTCGCGTCCTAAGGATATA 59.071 47.826 5.77 0.00 32.73 0.86
2898 3001 4.032672 CGTAGTCGCGTCCTAAGGATATAG 59.967 50.000 5.77 0.00 32.73 1.31
2899 3002 2.748532 AGTCGCGTCCTAAGGATATAGC 59.251 50.000 5.77 0.00 32.73 2.97
2900 3003 2.089980 TCGCGTCCTAAGGATATAGCC 58.910 52.381 5.77 0.00 32.73 3.93
2901 3004 1.816835 CGCGTCCTAAGGATATAGCCA 59.183 52.381 10.21 0.00 32.73 4.75
2902 3005 2.427453 CGCGTCCTAAGGATATAGCCAT 59.573 50.000 10.21 0.00 32.73 4.40
2903 3006 3.735208 CGCGTCCTAAGGATATAGCCATG 60.735 52.174 10.21 0.00 32.73 3.66
2904 3007 3.195825 GCGTCCTAAGGATATAGCCATGT 59.804 47.826 10.21 0.00 32.73 3.21
2905 3008 4.322801 GCGTCCTAAGGATATAGCCATGTT 60.323 45.833 10.21 0.00 32.73 2.71
2906 3009 5.171476 CGTCCTAAGGATATAGCCATGTTG 58.829 45.833 10.21 0.00 32.73 3.33
2907 3010 5.491982 GTCCTAAGGATATAGCCATGTTGG 58.508 45.833 10.21 4.85 35.58 3.77
2917 3020 2.439837 CCATGTTGGCAACCCTTGT 58.560 52.632 26.31 5.79 0.00 3.16
2918 3021 0.758123 CCATGTTGGCAACCCTTGTT 59.242 50.000 26.31 2.96 34.14 2.83
2919 3022 1.967066 CCATGTTGGCAACCCTTGTTA 59.033 47.619 26.31 7.32 32.09 2.41
2920 3023 2.366916 CCATGTTGGCAACCCTTGTTAA 59.633 45.455 26.31 6.57 32.09 2.01
2921 3024 3.389221 CATGTTGGCAACCCTTGTTAAC 58.611 45.455 26.31 0.00 32.09 2.01
2922 3025 2.457598 TGTTGGCAACCCTTGTTAACA 58.542 42.857 26.31 3.59 36.77 2.41
2923 3026 2.832129 TGTTGGCAACCCTTGTTAACAA 59.168 40.909 26.31 19.53 36.46 2.83
2924 3027 3.260884 TGTTGGCAACCCTTGTTAACAAA 59.739 39.130 26.31 6.43 36.46 2.83
2925 3028 4.080863 TGTTGGCAACCCTTGTTAACAAAT 60.081 37.500 26.31 7.86 36.46 2.32
2926 3029 4.329462 TGGCAACCCTTGTTAACAAATC 57.671 40.909 20.89 7.34 35.15 2.17
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
16 17 3.216800 ACATGCTCACTCATTGTGTGTT 58.783 40.909 16.12 1.39 46.27 3.32
25 26 4.320714 GCTCATTTTGAACATGCTCACTCA 60.321 41.667 0.00 0.00 0.00 3.41
28 29 4.170292 AGCTCATTTTGAACATGCTCAC 57.830 40.909 0.00 0.00 0.00 3.51
40 41 7.716799 TGGTTCAATTATGGTAGCTCATTTT 57.283 32.000 0.00 0.00 0.00 1.82
53 54 8.926374 TGATGGCTCATTAATTGGTTCAATTAT 58.074 29.630 12.14 3.20 43.09 1.28
63 64 6.984474 AGCTCATTTTGATGGCTCATTAATTG 59.016 34.615 0.00 0.00 0.00 2.32
66 67 6.039717 GGTAGCTCATTTTGATGGCTCATTAA 59.960 38.462 0.00 0.00 32.84 1.40
67 68 5.532406 GGTAGCTCATTTTGATGGCTCATTA 59.468 40.000 0.00 0.00 32.84 1.90
75 76 3.127548 ACTTGCGGTAGCTCATTTTGATG 59.872 43.478 0.00 0.00 45.42 3.07
150 151 4.681978 GGCTCACTTCGGGCACGT 62.682 66.667 8.89 0.00 41.85 4.49
295 296 1.977544 AGGTACTGCTTCGTCCGCT 60.978 57.895 0.00 0.00 37.18 5.52
307 308 3.094062 ATCGCCGCATGCAGGTACT 62.094 57.895 19.57 5.92 41.33 2.73
369 370 2.521708 GGTTGCTGCCCCAAGTGT 60.522 61.111 0.00 0.00 0.00 3.55
371 372 4.974721 CCGGTTGCTGCCCCAAGT 62.975 66.667 0.00 0.00 0.00 3.16
547 582 1.097547 CATCCCGCGCTTTCTTCCAT 61.098 55.000 5.56 0.00 0.00 3.41
551 586 1.133025 CATTTCATCCCGCGCTTTCTT 59.867 47.619 5.56 0.00 0.00 2.52
628 665 1.017177 CCCAATCCGAGAAAACGCGA 61.017 55.000 15.93 0.00 0.00 5.87
638 675 1.632018 AAATCCCGAGCCCAATCCGA 61.632 55.000 0.00 0.00 0.00 4.55
642 679 1.329913 GGCAAAATCCCGAGCCCAAT 61.330 55.000 0.00 0.00 41.25 3.16
681 718 2.875485 CATCACGTCCCGACTCGT 59.125 61.111 0.00 0.00 40.99 4.18
684 721 4.129737 CCGCATCACGTCCCGACT 62.130 66.667 0.00 0.00 41.42 4.18
686 723 2.622903 GATTCCGCATCACGTCCCGA 62.623 60.000 0.00 0.00 41.42 5.14
691 728 1.858091 GATCAGATTCCGCATCACGT 58.142 50.000 0.00 0.00 41.42 4.49
694 731 0.033920 CCCGATCAGATTCCGCATCA 59.966 55.000 0.00 0.00 33.75 3.07
702 739 2.514458 AAAACCAGCCCGATCAGATT 57.486 45.000 0.00 0.00 0.00 2.40
703 740 2.369394 GAAAAACCAGCCCGATCAGAT 58.631 47.619 0.00 0.00 0.00 2.90
800 838 1.402968 CCATGCCATTCCAACTCTTCG 59.597 52.381 0.00 0.00 0.00 3.79
814 852 1.066716 TCATTTGAGCTTTGCCATGCC 60.067 47.619 0.00 0.00 0.00 4.40
828 866 1.808945 AGCCAAGAAGTCGCTCATTTG 59.191 47.619 0.00 0.00 0.00 2.32
874 914 1.437772 ATCGAATCGCCGACTCGACT 61.438 55.000 23.22 9.63 43.71 4.18
940 980 0.259356 AACGGTTCCTTGGTTCCCAA 59.741 50.000 0.00 0.00 41.69 4.12
941 981 0.179012 GAACGGTTCCTTGGTTCCCA 60.179 55.000 9.75 0.00 35.24 4.37
957 998 1.259544 CTCCGCAAACGCAAACGAAC 61.260 55.000 0.00 0.00 43.93 3.95
1207 1250 0.674895 CCGAAGAAGAAGGCCTGGTG 60.675 60.000 5.69 0.00 0.00 4.17
1353 1402 3.432051 GATGTCCACCTCTCCCGCG 62.432 68.421 0.00 0.00 0.00 6.46
1354 1403 2.303549 CTGATGTCCACCTCTCCCGC 62.304 65.000 0.00 0.00 0.00 6.13
1355 1404 1.819229 CTGATGTCCACCTCTCCCG 59.181 63.158 0.00 0.00 0.00 5.14
1356 1405 0.980231 AGCTGATGTCCACCTCTCCC 60.980 60.000 0.00 0.00 0.00 4.30
1359 1408 2.106566 CTGTAGCTGATGTCCACCTCT 58.893 52.381 0.00 0.00 0.00 3.69
1607 1662 5.449553 GGATCCCCAAATCACTAAATCAGT 58.550 41.667 0.00 0.00 38.32 3.41
1641 1696 4.385825 ACGGCTGAAGAAGAAATAACACA 58.614 39.130 0.00 0.00 0.00 3.72
1647 1702 3.288809 GCAAACGGCTGAAGAAGAAAT 57.711 42.857 0.00 0.00 40.25 2.17
1648 1703 2.774439 GCAAACGGCTGAAGAAGAAA 57.226 45.000 0.00 0.00 40.25 2.52
1660 1730 4.389576 GCCGTGCTGAGCAAACGG 62.390 66.667 26.25 26.25 46.29 4.44
1674 1744 4.335647 AGCACCTTGTCAGGGCCG 62.336 66.667 0.00 0.00 46.01 6.13
1715 1785 4.160635 GTTGATGTTCGGCGGCGG 62.161 66.667 31.73 13.01 0.00 6.13
1716 1786 4.499023 CGTTGATGTTCGGCGGCG 62.499 66.667 27.15 27.15 0.00 6.46
1717 1787 4.160635 CCGTTGATGTTCGGCGGC 62.161 66.667 7.21 0.00 40.28 6.53
1910 1980 2.393768 GCTCATGCCCCATATCGCG 61.394 63.158 0.00 0.00 0.00 5.87
2043 2114 3.423749 TCCCGATTAAAAACCCAGGAAC 58.576 45.455 0.00 0.00 0.00 3.62
2071 2142 2.159476 CGTGTCTCAAAATCAGGCCATG 60.159 50.000 5.01 0.00 0.00 3.66
2095 2166 1.656652 CAGGACCCAACATGATCGAC 58.343 55.000 0.00 0.00 0.00 4.20
2116 2187 6.522946 TCAAAAAGCAATCCATCAACATGAA 58.477 32.000 0.00 0.00 30.57 2.57
2149 2220 2.485396 ATGACCCAACATGACCCCA 58.515 52.632 0.00 0.00 0.00 4.96
2215 2289 5.295152 CGTCTAATTAATCAGGTGTACCCC 58.705 45.833 0.00 0.00 36.42 4.95
2218 2295 6.803642 AGACCGTCTAATTAATCAGGTGTAC 58.196 40.000 0.00 0.00 0.00 2.90
2340 2442 1.408822 GGTTACATCCTCAGGGCAAGG 60.409 57.143 0.00 0.00 35.05 3.61
2342 2444 1.367346 TGGTTACATCCTCAGGGCAA 58.633 50.000 0.00 0.00 0.00 4.52
2353 2455 3.271250 CTGGCCAGCTTGGTTACAT 57.729 52.632 22.33 0.00 40.46 2.29
2364 2466 1.838112 TTGTTAATGAGGCTGGCCAG 58.162 50.000 29.34 29.34 38.92 4.85
2365 2467 2.300956 TTTGTTAATGAGGCTGGCCA 57.699 45.000 14.39 4.71 38.92 5.36
2366 2468 3.026694 AGATTTGTTAATGAGGCTGGCC 58.973 45.455 3.00 3.00 0.00 5.36
2367 2469 4.725790 AAGATTTGTTAATGAGGCTGGC 57.274 40.909 0.00 0.00 0.00 4.85
2368 2470 7.338800 ACATAAGATTTGTTAATGAGGCTGG 57.661 36.000 0.00 0.00 0.00 4.85
2369 2471 8.246180 ACAACATAAGATTTGTTAATGAGGCTG 58.754 33.333 0.00 0.00 35.61 4.85
2370 2472 8.246180 CACAACATAAGATTTGTTAATGAGGCT 58.754 33.333 0.00 0.00 35.61 4.58
2371 2473 7.009540 GCACAACATAAGATTTGTTAATGAGGC 59.990 37.037 0.00 0.00 35.61 4.70
2388 2490 3.485394 ACAATCACACAGGCACAACATA 58.515 40.909 0.00 0.00 0.00 2.29
2398 2501 4.539870 GTCCATGACAAACAATCACACAG 58.460 43.478 0.00 0.00 32.09 3.66
2403 2506 3.133141 TCGGTCCATGACAAACAATCA 57.867 42.857 0.00 0.00 33.68 2.57
2409 2512 7.403312 AAAATGATAATCGGTCCATGACAAA 57.597 32.000 0.00 0.00 33.68 2.83
2415 2518 6.039717 CACAAGGAAAATGATAATCGGTCCAT 59.960 38.462 0.00 0.00 0.00 3.41
2416 2519 5.356751 CACAAGGAAAATGATAATCGGTCCA 59.643 40.000 0.00 0.00 0.00 4.02
2417 2520 5.733373 GCACAAGGAAAATGATAATCGGTCC 60.733 44.000 0.00 0.00 0.00 4.46
2418 2521 5.273944 GCACAAGGAAAATGATAATCGGTC 58.726 41.667 0.00 0.00 0.00 4.79
2419 2522 4.097892 GGCACAAGGAAAATGATAATCGGT 59.902 41.667 0.00 0.00 0.00 4.69
2420 2523 4.339247 AGGCACAAGGAAAATGATAATCGG 59.661 41.667 0.00 0.00 0.00 4.18
2421 2524 5.066375 TGAGGCACAAGGAAAATGATAATCG 59.934 40.000 0.00 0.00 0.00 3.34
2422 2525 6.455360 TGAGGCACAAGGAAAATGATAATC 57.545 37.500 0.00 0.00 0.00 1.75
2423 2526 7.427989 AATGAGGCACAAGGAAAATGATAAT 57.572 32.000 0.00 0.00 0.00 1.28
2424 2527 6.404623 CGAATGAGGCACAAGGAAAATGATAA 60.405 38.462 0.00 0.00 0.00 1.75
2425 2528 5.066375 CGAATGAGGCACAAGGAAAATGATA 59.934 40.000 0.00 0.00 0.00 2.15
2426 2529 4.142315 CGAATGAGGCACAAGGAAAATGAT 60.142 41.667 0.00 0.00 0.00 2.45
2427 2530 3.191162 CGAATGAGGCACAAGGAAAATGA 59.809 43.478 0.00 0.00 0.00 2.57
2428 2531 3.504863 CGAATGAGGCACAAGGAAAATG 58.495 45.455 0.00 0.00 0.00 2.32
2429 2532 2.493278 CCGAATGAGGCACAAGGAAAAT 59.507 45.455 0.00 0.00 0.00 1.82
2430 2533 1.885887 CCGAATGAGGCACAAGGAAAA 59.114 47.619 0.00 0.00 0.00 2.29
2431 2534 1.202879 ACCGAATGAGGCACAAGGAAA 60.203 47.619 10.32 0.00 33.69 3.13
2432 2535 0.400213 ACCGAATGAGGCACAAGGAA 59.600 50.000 10.32 0.00 33.69 3.36
2433 2536 0.400213 AACCGAATGAGGCACAAGGA 59.600 50.000 10.32 0.00 33.69 3.36
2434 2537 1.068333 CAAACCGAATGAGGCACAAGG 60.068 52.381 0.00 0.00 33.69 3.61
2435 2538 1.068333 CCAAACCGAATGAGGCACAAG 60.068 52.381 0.00 0.00 33.69 3.16
2436 2539 0.958091 CCAAACCGAATGAGGCACAA 59.042 50.000 0.00 0.00 33.69 3.33
2437 2540 0.109532 TCCAAACCGAATGAGGCACA 59.890 50.000 0.00 0.00 33.69 4.57
2438 2541 0.804989 CTCCAAACCGAATGAGGCAC 59.195 55.000 0.00 0.00 33.69 5.01
2439 2542 0.322456 CCTCCAAACCGAATGAGGCA 60.322 55.000 0.00 0.00 38.12 4.75
2440 2543 0.035439 TCCTCCAAACCGAATGAGGC 60.035 55.000 0.00 0.00 43.33 4.70
2441 2544 2.488153 GTTTCCTCCAAACCGAATGAGG 59.512 50.000 0.00 0.00 44.69 3.86
2442 2545 3.831715 GTTTCCTCCAAACCGAATGAG 57.168 47.619 0.00 0.00 38.86 2.90
2460 2563 9.990868 ACCACTCCTAATTCTTATATTTTGGTT 57.009 29.630 0.00 0.00 0.00 3.67
2478 2581 9.213777 TGACTATCAAATTCTTATACCACTCCT 57.786 33.333 0.00 0.00 0.00 3.69
2496 2599 9.605275 CAAGACAATTTCTTAGGATGACTATCA 57.395 33.333 3.56 0.00 43.23 2.15
2497 2600 8.555361 GCAAGACAATTTCTTAGGATGACTATC 58.445 37.037 3.56 0.00 43.23 2.08
2498 2601 7.500559 GGCAAGACAATTTCTTAGGATGACTAT 59.499 37.037 3.56 0.00 43.23 2.12
2499 2602 6.823689 GGCAAGACAATTTCTTAGGATGACTA 59.176 38.462 3.56 0.00 43.23 2.59
2500 2603 5.649831 GGCAAGACAATTTCTTAGGATGACT 59.350 40.000 3.56 0.00 43.23 3.41
2501 2604 5.649831 AGGCAAGACAATTTCTTAGGATGAC 59.350 40.000 3.56 0.00 43.23 3.06
2502 2605 5.819991 AGGCAAGACAATTTCTTAGGATGA 58.180 37.500 3.56 0.00 43.23 2.92
2503 2606 5.220739 CGAGGCAAGACAATTTCTTAGGATG 60.221 44.000 3.56 0.00 43.23 3.51
2504 2607 4.878397 CGAGGCAAGACAATTTCTTAGGAT 59.122 41.667 3.56 0.00 43.23 3.24
2505 2608 4.253685 CGAGGCAAGACAATTTCTTAGGA 58.746 43.478 3.56 0.00 43.23 2.94
2506 2609 4.003648 ACGAGGCAAGACAATTTCTTAGG 58.996 43.478 0.00 0.00 43.23 2.69
2507 2610 5.390991 GGAACGAGGCAAGACAATTTCTTAG 60.391 44.000 0.00 0.00 43.23 2.18
2508 2611 4.454504 GGAACGAGGCAAGACAATTTCTTA 59.545 41.667 0.00 0.00 43.23 2.10
2509 2612 3.253432 GGAACGAGGCAAGACAATTTCTT 59.747 43.478 0.00 0.00 46.29 2.52
2510 2613 2.814336 GGAACGAGGCAAGACAATTTCT 59.186 45.455 0.00 0.00 35.32 2.52
2511 2614 2.814336 AGGAACGAGGCAAGACAATTTC 59.186 45.455 0.00 0.00 0.00 2.17
2512 2615 2.863809 AGGAACGAGGCAAGACAATTT 58.136 42.857 0.00 0.00 0.00 1.82
2513 2616 2.568623 AGGAACGAGGCAAGACAATT 57.431 45.000 0.00 0.00 0.00 2.32
2514 2617 2.973945 GTAGGAACGAGGCAAGACAAT 58.026 47.619 0.00 0.00 0.00 2.71
2515 2618 2.450609 GTAGGAACGAGGCAAGACAA 57.549 50.000 0.00 0.00 0.00 3.18
2527 2630 9.274065 CTTCAAACTTATTTTATGCGTAGGAAC 57.726 33.333 0.00 0.00 0.00 3.62
2528 2631 9.005777 ACTTCAAACTTATTTTATGCGTAGGAA 57.994 29.630 0.00 0.00 0.00 3.36
2529 2632 8.556213 ACTTCAAACTTATTTTATGCGTAGGA 57.444 30.769 0.00 0.00 0.00 2.94
2530 2633 9.916397 CTACTTCAAACTTATTTTATGCGTAGG 57.084 33.333 0.00 0.00 0.00 3.18
2533 2636 9.988350 CATCTACTTCAAACTTATTTTATGCGT 57.012 29.630 0.00 0.00 0.00 5.24
2534 2637 9.988350 ACATCTACTTCAAACTTATTTTATGCG 57.012 29.630 0.00 0.00 0.00 4.73
2546 2649 9.262358 GGAGGAATATACACATCTACTTCAAAC 57.738 37.037 0.00 0.00 0.00 2.93
2547 2650 8.988060 TGGAGGAATATACACATCTACTTCAAA 58.012 33.333 0.00 0.00 0.00 2.69
2548 2651 8.547481 TGGAGGAATATACACATCTACTTCAA 57.453 34.615 0.00 0.00 0.00 2.69
2549 2652 8.547481 TTGGAGGAATATACACATCTACTTCA 57.453 34.615 0.00 0.00 0.00 3.02
2550 2653 9.832445 TTTTGGAGGAATATACACATCTACTTC 57.168 33.333 0.00 0.00 0.00 3.01
2585 2688 8.749354 GGGAATTTTGTAGGAACACTATTCATT 58.251 33.333 11.07 0.00 37.37 2.57
2586 2689 7.067008 CGGGAATTTTGTAGGAACACTATTCAT 59.933 37.037 11.07 0.00 37.37 2.57
2587 2690 6.373216 CGGGAATTTTGTAGGAACACTATTCA 59.627 38.462 11.07 0.00 37.37 2.57
2588 2691 6.373495 ACGGGAATTTTGTAGGAACACTATTC 59.627 38.462 0.00 0.00 36.17 1.75
2589 2692 6.243148 ACGGGAATTTTGTAGGAACACTATT 58.757 36.000 0.00 0.00 34.61 1.73
2590 2693 5.812286 ACGGGAATTTTGTAGGAACACTAT 58.188 37.500 0.00 0.00 34.61 2.12
2591 2694 5.231702 ACGGGAATTTTGTAGGAACACTA 57.768 39.130 0.00 0.00 34.61 2.74
2592 2695 4.094830 ACGGGAATTTTGTAGGAACACT 57.905 40.909 0.00 0.00 34.61 3.55
2593 2696 4.143052 CGTACGGGAATTTTGTAGGAACAC 60.143 45.833 7.57 0.00 34.61 3.32
2594 2697 3.995705 CGTACGGGAATTTTGTAGGAACA 59.004 43.478 7.57 0.00 0.00 3.18
2595 2698 3.181517 GCGTACGGGAATTTTGTAGGAAC 60.182 47.826 18.39 0.00 0.00 3.62
2596 2699 3.002102 GCGTACGGGAATTTTGTAGGAA 58.998 45.455 18.39 0.00 0.00 3.36
2597 2700 2.620242 GCGTACGGGAATTTTGTAGGA 58.380 47.619 18.39 0.00 0.00 2.94
2598 2701 1.325338 CGCGTACGGGAATTTTGTAGG 59.675 52.381 26.40 0.00 34.97 3.18
2599 2702 1.994779 ACGCGTACGGGAATTTTGTAG 59.005 47.619 35.08 0.00 46.04 2.74
2600 2703 2.077413 ACGCGTACGGGAATTTTGTA 57.923 45.000 35.08 0.00 46.04 2.41
2601 2704 1.195222 GAACGCGTACGGGAATTTTGT 59.805 47.619 35.08 11.18 46.04 2.83
2602 2705 1.464521 GGAACGCGTACGGGAATTTTG 60.465 52.381 35.08 0.00 46.04 2.44
2603 2706 0.798159 GGAACGCGTACGGGAATTTT 59.202 50.000 35.08 20.38 46.04 1.82
2604 2707 1.020861 GGGAACGCGTACGGGAATTT 61.021 55.000 35.08 20.73 46.04 1.82
2605 2708 1.448365 GGGAACGCGTACGGGAATT 60.448 57.895 35.08 21.42 46.04 2.17
2606 2709 1.037030 TAGGGAACGCGTACGGGAAT 61.037 55.000 35.08 23.54 46.04 3.01
2607 2710 1.677300 TAGGGAACGCGTACGGGAA 60.677 57.895 35.08 12.37 46.04 3.97
2608 2711 2.045438 TAGGGAACGCGTACGGGA 60.045 61.111 35.08 11.91 46.04 5.14
2609 2712 2.102946 GTAGGGAACGCGTACGGG 59.897 66.667 28.27 28.27 46.04 5.28
2610 2713 0.388391 TTTGTAGGGAACGCGTACGG 60.388 55.000 14.46 9.73 46.04 4.02
2612 2715 1.070821 GGTTTGTAGGGAACGCGTAC 58.929 55.000 14.46 7.26 0.00 3.67
2613 2716 0.388391 CGGTTTGTAGGGAACGCGTA 60.388 55.000 14.46 0.00 0.00 4.42
2614 2717 1.665599 CGGTTTGTAGGGAACGCGT 60.666 57.895 5.58 5.58 0.00 6.01
2615 2718 0.945265 TTCGGTTTGTAGGGAACGCG 60.945 55.000 3.53 3.53 0.00 6.01
2616 2719 1.129811 CATTCGGTTTGTAGGGAACGC 59.870 52.381 0.00 0.00 0.00 4.84
2617 2720 1.129811 GCATTCGGTTTGTAGGGAACG 59.870 52.381 0.00 0.00 0.00 3.95
2618 2721 2.156098 TGCATTCGGTTTGTAGGGAAC 58.844 47.619 0.00 0.00 0.00 3.62
2619 2722 2.570415 TGCATTCGGTTTGTAGGGAA 57.430 45.000 0.00 0.00 0.00 3.97
2620 2723 2.238646 AGATGCATTCGGTTTGTAGGGA 59.761 45.455 0.00 0.00 0.00 4.20
2621 2724 2.643551 AGATGCATTCGGTTTGTAGGG 58.356 47.619 0.00 0.00 0.00 3.53
2622 2725 6.455647 TCTATAGATGCATTCGGTTTGTAGG 58.544 40.000 0.00 0.00 0.00 3.18
2623 2726 7.946655 TTCTATAGATGCATTCGGTTTGTAG 57.053 36.000 2.58 0.00 0.00 2.74
2624 2727 8.725405 TTTTCTATAGATGCATTCGGTTTGTA 57.275 30.769 2.58 0.00 0.00 2.41
2625 2728 7.624360 TTTTCTATAGATGCATTCGGTTTGT 57.376 32.000 2.58 0.00 0.00 2.83
2626 2729 9.520204 AATTTTTCTATAGATGCATTCGGTTTG 57.480 29.630 2.58 0.00 0.00 2.93
2628 2731 9.736023 GAAATTTTTCTATAGATGCATTCGGTT 57.264 29.630 2.58 0.00 34.41 4.44
2629 2732 8.352942 GGAAATTTTTCTATAGATGCATTCGGT 58.647 33.333 2.58 0.00 37.35 4.69
2630 2733 8.571336 AGGAAATTTTTCTATAGATGCATTCGG 58.429 33.333 2.58 0.00 37.35 4.30
2660 2763 6.210584 TGGGAAAAACATAGGAACAAGGATTC 59.789 38.462 0.00 0.00 0.00 2.52
2661 2764 6.081356 TGGGAAAAACATAGGAACAAGGATT 58.919 36.000 0.00 0.00 0.00 3.01
2662 2765 5.650283 TGGGAAAAACATAGGAACAAGGAT 58.350 37.500 0.00 0.00 0.00 3.24
2663 2766 5.068215 TGGGAAAAACATAGGAACAAGGA 57.932 39.130 0.00 0.00 0.00 3.36
2664 2767 6.889722 TCTATGGGAAAAACATAGGAACAAGG 59.110 38.462 11.28 0.00 44.92 3.61
2665 2768 7.938140 TCTATGGGAAAAACATAGGAACAAG 57.062 36.000 11.28 0.00 44.92 3.16
2666 2769 8.713708 TTTCTATGGGAAAAACATAGGAACAA 57.286 30.769 11.28 0.00 44.92 2.83
2667 2770 8.893563 ATTTCTATGGGAAAAACATAGGAACA 57.106 30.769 8.00 0.00 44.77 3.18
2668 2771 8.414003 GGATTTCTATGGGAAAAACATAGGAAC 58.586 37.037 8.00 4.04 44.77 3.62
2669 2772 8.343787 AGGATTTCTATGGGAAAAACATAGGAA 58.656 33.333 8.21 8.21 45.56 3.36
2670 2773 7.882755 AGGATTTCTATGGGAAAAACATAGGA 58.117 34.615 11.28 1.67 45.56 2.94
2671 2774 7.231519 GGAGGATTTCTATGGGAAAAACATAGG 59.768 40.741 11.28 0.00 45.56 2.57
2672 2775 7.779798 TGGAGGATTTCTATGGGAAAAACATAG 59.220 37.037 6.19 6.19 45.56 2.23
2673 2776 7.647827 TGGAGGATTTCTATGGGAAAAACATA 58.352 34.615 0.00 0.00 45.56 2.29
2674 2777 6.502138 TGGAGGATTTCTATGGGAAAAACAT 58.498 36.000 0.00 0.00 45.56 2.71
2675 2778 5.898120 TGGAGGATTTCTATGGGAAAAACA 58.102 37.500 0.00 0.00 45.56 2.83
2676 2779 6.850752 TTGGAGGATTTCTATGGGAAAAAC 57.149 37.500 0.00 0.00 45.56 2.43
2677 2780 6.212589 GGTTTGGAGGATTTCTATGGGAAAAA 59.787 38.462 0.00 0.00 45.56 1.94
2678 2781 5.719563 GGTTTGGAGGATTTCTATGGGAAAA 59.280 40.000 0.00 0.00 45.56 2.29
2679 2782 5.222442 TGGTTTGGAGGATTTCTATGGGAAA 60.222 40.000 0.00 0.00 46.33 3.13
2680 2783 4.293634 TGGTTTGGAGGATTTCTATGGGAA 59.706 41.667 0.00 0.00 0.00 3.97
2681 2784 3.855599 TGGTTTGGAGGATTTCTATGGGA 59.144 43.478 0.00 0.00 0.00 4.37
2682 2785 4.249638 TGGTTTGGAGGATTTCTATGGG 57.750 45.455 0.00 0.00 0.00 4.00
2683 2786 6.380846 TCATTTGGTTTGGAGGATTTCTATGG 59.619 38.462 0.00 0.00 0.00 2.74
2684 2787 7.408756 TCATTTGGTTTGGAGGATTTCTATG 57.591 36.000 0.00 0.00 0.00 2.23
2685 2788 7.651027 CTCATTTGGTTTGGAGGATTTCTAT 57.349 36.000 0.00 0.00 0.00 1.98
2687 2790 5.990120 CTCATTTGGTTTGGAGGATTTCT 57.010 39.130 0.00 0.00 0.00 2.52
2694 2797 1.928868 AGGCCTCATTTGGTTTGGAG 58.071 50.000 0.00 0.00 0.00 3.86
2695 2798 2.397044 AAGGCCTCATTTGGTTTGGA 57.603 45.000 5.23 0.00 0.00 3.53
2696 2799 4.615588 TTTAAGGCCTCATTTGGTTTGG 57.384 40.909 5.23 0.00 0.00 3.28
2697 2800 8.791327 AATATTTTAAGGCCTCATTTGGTTTG 57.209 30.769 5.23 0.00 0.00 2.93
2698 2801 8.825774 AGAATATTTTAAGGCCTCATTTGGTTT 58.174 29.630 5.23 0.00 0.00 3.27
2699 2802 8.379428 AGAATATTTTAAGGCCTCATTTGGTT 57.621 30.769 5.23 0.00 0.00 3.67
2700 2803 7.978099 AGAATATTTTAAGGCCTCATTTGGT 57.022 32.000 5.23 0.00 0.00 3.67
2701 2804 9.136323 ACTAGAATATTTTAAGGCCTCATTTGG 57.864 33.333 5.23 0.00 0.00 3.28
2720 2823 9.539825 CTTGCTCATGATACTTGTTACTAGAAT 57.460 33.333 0.00 0.00 0.00 2.40
2721 2824 8.749354 TCTTGCTCATGATACTTGTTACTAGAA 58.251 33.333 0.00 0.00 0.00 2.10
2722 2825 8.293699 TCTTGCTCATGATACTTGTTACTAGA 57.706 34.615 0.00 0.00 0.00 2.43
2723 2826 9.539825 AATCTTGCTCATGATACTTGTTACTAG 57.460 33.333 0.00 0.00 0.00 2.57
2724 2827 9.890629 AAATCTTGCTCATGATACTTGTTACTA 57.109 29.630 0.00 0.00 0.00 1.82
2725 2828 8.798859 AAATCTTGCTCATGATACTTGTTACT 57.201 30.769 0.00 0.00 0.00 2.24
2726 2829 9.495754 GAAAATCTTGCTCATGATACTTGTTAC 57.504 33.333 0.00 0.00 0.00 2.50
2727 2830 9.453572 AGAAAATCTTGCTCATGATACTTGTTA 57.546 29.630 0.00 0.00 0.00 2.41
2728 2831 8.345724 AGAAAATCTTGCTCATGATACTTGTT 57.654 30.769 0.00 0.00 0.00 2.83
2729 2832 7.934855 AGAAAATCTTGCTCATGATACTTGT 57.065 32.000 0.00 0.00 0.00 3.16
2730 2833 9.932699 CTTAGAAAATCTTGCTCATGATACTTG 57.067 33.333 0.00 0.00 0.00 3.16
2731 2834 9.896645 TCTTAGAAAATCTTGCTCATGATACTT 57.103 29.630 0.00 0.00 0.00 2.24
2732 2835 9.545105 CTCTTAGAAAATCTTGCTCATGATACT 57.455 33.333 0.00 0.00 0.00 2.12
2733 2836 8.772705 CCTCTTAGAAAATCTTGCTCATGATAC 58.227 37.037 0.00 0.00 0.00 2.24
2734 2837 7.443575 GCCTCTTAGAAAATCTTGCTCATGATA 59.556 37.037 0.00 0.00 0.00 2.15
2735 2838 6.262720 GCCTCTTAGAAAATCTTGCTCATGAT 59.737 38.462 0.00 0.00 0.00 2.45
2736 2839 5.587844 GCCTCTTAGAAAATCTTGCTCATGA 59.412 40.000 0.00 0.00 0.00 3.07
2737 2840 5.356190 TGCCTCTTAGAAAATCTTGCTCATG 59.644 40.000 0.00 0.00 0.00 3.07
2738 2841 5.503927 TGCCTCTTAGAAAATCTTGCTCAT 58.496 37.500 0.00 0.00 0.00 2.90
2739 2842 4.910195 TGCCTCTTAGAAAATCTTGCTCA 58.090 39.130 0.00 0.00 0.00 4.26
2740 2843 5.182001 TGTTGCCTCTTAGAAAATCTTGCTC 59.818 40.000 0.00 0.00 0.00 4.26
2741 2844 5.072741 TGTTGCCTCTTAGAAAATCTTGCT 58.927 37.500 0.00 0.00 0.00 3.91
2742 2845 5.376854 TGTTGCCTCTTAGAAAATCTTGC 57.623 39.130 0.00 0.00 0.00 4.01
2771 2874 8.859090 TCATGAACAACCATCAACTCTTAAAAT 58.141 29.630 0.00 0.00 0.00 1.82
2772 2875 8.231692 TCATGAACAACCATCAACTCTTAAAA 57.768 30.769 0.00 0.00 0.00 1.52
2773 2876 7.815840 TCATGAACAACCATCAACTCTTAAA 57.184 32.000 0.00 0.00 0.00 1.52
2774 2877 7.575532 GCATCATGAACAACCATCAACTCTTAA 60.576 37.037 0.00 0.00 0.00 1.85
2775 2878 6.127925 GCATCATGAACAACCATCAACTCTTA 60.128 38.462 0.00 0.00 0.00 2.10
2776 2879 5.336213 GCATCATGAACAACCATCAACTCTT 60.336 40.000 0.00 0.00 0.00 2.85
2777 2880 4.157289 GCATCATGAACAACCATCAACTCT 59.843 41.667 0.00 0.00 0.00 3.24
2778 2881 4.082625 TGCATCATGAACAACCATCAACTC 60.083 41.667 0.00 0.00 0.00 3.01
2779 2882 3.827876 TGCATCATGAACAACCATCAACT 59.172 39.130 0.00 0.00 0.00 3.16
2780 2883 4.082625 TCTGCATCATGAACAACCATCAAC 60.083 41.667 0.00 0.00 0.00 3.18
2781 2884 4.080687 TCTGCATCATGAACAACCATCAA 58.919 39.130 0.00 0.00 0.00 2.57
2782 2885 3.688235 TCTGCATCATGAACAACCATCA 58.312 40.909 0.00 0.00 0.00 3.07
2783 2886 4.397103 TCTTCTGCATCATGAACAACCATC 59.603 41.667 0.00 0.00 0.00 3.51
2784 2887 4.338012 TCTTCTGCATCATGAACAACCAT 58.662 39.130 0.00 0.00 0.00 3.55
2785 2888 3.753815 TCTTCTGCATCATGAACAACCA 58.246 40.909 0.00 0.00 0.00 3.67
2786 2889 4.005650 TCTCTTCTGCATCATGAACAACC 58.994 43.478 0.00 0.00 0.00 3.77
2787 2890 4.094590 CCTCTCTTCTGCATCATGAACAAC 59.905 45.833 0.00 0.00 0.00 3.32
2788 2891 4.259356 CCTCTCTTCTGCATCATGAACAA 58.741 43.478 0.00 0.00 0.00 2.83
2789 2892 3.262660 ACCTCTCTTCTGCATCATGAACA 59.737 43.478 0.00 0.00 0.00 3.18
2790 2893 3.870419 GACCTCTCTTCTGCATCATGAAC 59.130 47.826 0.00 0.00 0.00 3.18
2791 2894 3.118482 GGACCTCTCTTCTGCATCATGAA 60.118 47.826 0.00 0.00 0.00 2.57
2792 2895 2.433604 GGACCTCTCTTCTGCATCATGA 59.566 50.000 0.00 0.00 0.00 3.07
2793 2896 2.802415 CGGACCTCTCTTCTGCATCATG 60.802 54.545 0.00 0.00 0.00 3.07
2794 2897 1.411977 CGGACCTCTCTTCTGCATCAT 59.588 52.381 0.00 0.00 0.00 2.45
2795 2898 0.820226 CGGACCTCTCTTCTGCATCA 59.180 55.000 0.00 0.00 0.00 3.07
2796 2899 1.107114 TCGGACCTCTCTTCTGCATC 58.893 55.000 0.00 0.00 0.00 3.91
2797 2900 1.480137 CTTCGGACCTCTCTTCTGCAT 59.520 52.381 0.00 0.00 0.00 3.96
2798 2901 0.891373 CTTCGGACCTCTCTTCTGCA 59.109 55.000 0.00 0.00 0.00 4.41
2799 2902 0.459411 GCTTCGGACCTCTCTTCTGC 60.459 60.000 0.00 0.00 0.00 4.26
2800 2903 1.181786 AGCTTCGGACCTCTCTTCTG 58.818 55.000 0.00 0.00 0.00 3.02
2801 2904 2.291024 TGTAGCTTCGGACCTCTCTTCT 60.291 50.000 0.00 0.00 0.00 2.85
2802 2905 2.093106 TGTAGCTTCGGACCTCTCTTC 58.907 52.381 0.00 0.00 0.00 2.87
2803 2906 2.217510 TGTAGCTTCGGACCTCTCTT 57.782 50.000 0.00 0.00 0.00 2.85
2804 2907 2.428890 CAATGTAGCTTCGGACCTCTCT 59.571 50.000 0.00 0.00 0.00 3.10
2805 2908 2.815478 CAATGTAGCTTCGGACCTCTC 58.185 52.381 0.00 0.00 0.00 3.20
2806 2909 1.134670 GCAATGTAGCTTCGGACCTCT 60.135 52.381 0.00 0.00 0.00 3.69
2807 2910 1.134670 AGCAATGTAGCTTCGGACCTC 60.135 52.381 0.00 0.00 43.70 3.85
2808 2911 0.905357 AGCAATGTAGCTTCGGACCT 59.095 50.000 0.00 0.00 43.70 3.85
2809 2912 3.460648 AGCAATGTAGCTTCGGACC 57.539 52.632 0.00 0.00 43.70 4.46
2817 2920 5.043248 ACACAAAAACTCAAGCAATGTAGC 58.957 37.500 0.00 0.00 0.00 3.58
2818 2921 6.974622 AGAACACAAAAACTCAAGCAATGTAG 59.025 34.615 0.00 0.00 0.00 2.74
2819 2922 6.751425 CAGAACACAAAAACTCAAGCAATGTA 59.249 34.615 0.00 0.00 0.00 2.29
2820 2923 5.577945 CAGAACACAAAAACTCAAGCAATGT 59.422 36.000 0.00 0.00 0.00 2.71
2821 2924 5.806502 TCAGAACACAAAAACTCAAGCAATG 59.193 36.000 0.00 0.00 0.00 2.82
2822 2925 5.964758 TCAGAACACAAAAACTCAAGCAAT 58.035 33.333 0.00 0.00 0.00 3.56
2823 2926 5.384063 TCAGAACACAAAAACTCAAGCAA 57.616 34.783 0.00 0.00 0.00 3.91
2824 2927 5.182950 TCTTCAGAACACAAAAACTCAAGCA 59.817 36.000 0.00 0.00 0.00 3.91
2825 2928 5.513141 GTCTTCAGAACACAAAAACTCAAGC 59.487 40.000 0.00 0.00 0.00 4.01
2826 2929 6.611381 TGTCTTCAGAACACAAAAACTCAAG 58.389 36.000 0.00 0.00 0.00 3.02
2827 2930 6.567687 TGTCTTCAGAACACAAAAACTCAA 57.432 33.333 0.00 0.00 0.00 3.02
2828 2931 6.567687 TTGTCTTCAGAACACAAAAACTCA 57.432 33.333 1.74 0.00 0.00 3.41
2829 2932 8.466086 AAATTGTCTTCAGAACACAAAAACTC 57.534 30.769 7.93 0.00 33.84 3.01
2830 2933 9.573133 CTAAATTGTCTTCAGAACACAAAAACT 57.427 29.630 7.93 0.00 33.84 2.66
2831 2934 9.353999 ACTAAATTGTCTTCAGAACACAAAAAC 57.646 29.630 7.93 0.00 33.84 2.43
2833 2936 9.997482 GTACTAAATTGTCTTCAGAACACAAAA 57.003 29.630 7.93 0.00 33.84 2.44
2834 2937 9.168451 TGTACTAAATTGTCTTCAGAACACAAA 57.832 29.630 7.93 0.00 33.84 2.83
2835 2938 8.725405 TGTACTAAATTGTCTTCAGAACACAA 57.275 30.769 6.46 6.46 34.61 3.33
2836 2939 8.773645 CATGTACTAAATTGTCTTCAGAACACA 58.226 33.333 0.00 0.00 0.00 3.72
2837 2940 8.230486 CCATGTACTAAATTGTCTTCAGAACAC 58.770 37.037 0.00 0.00 0.00 3.32
2838 2941 7.390440 CCCATGTACTAAATTGTCTTCAGAACA 59.610 37.037 0.00 0.00 0.00 3.18
2839 2942 7.148239 CCCCATGTACTAAATTGTCTTCAGAAC 60.148 40.741 0.00 0.00 0.00 3.01
2840 2943 6.884295 CCCCATGTACTAAATTGTCTTCAGAA 59.116 38.462 0.00 0.00 0.00 3.02
2841 2944 6.214615 TCCCCATGTACTAAATTGTCTTCAGA 59.785 38.462 0.00 0.00 0.00 3.27
2842 2945 6.414732 TCCCCATGTACTAAATTGTCTTCAG 58.585 40.000 0.00 0.00 0.00 3.02
2843 2946 6.381498 TCCCCATGTACTAAATTGTCTTCA 57.619 37.500 0.00 0.00 0.00 3.02
2844 2947 5.823045 CCTCCCCATGTACTAAATTGTCTTC 59.177 44.000 0.00 0.00 0.00 2.87
2845 2948 5.491078 TCCTCCCCATGTACTAAATTGTCTT 59.509 40.000 0.00 0.00 0.00 3.01
2846 2949 5.036916 TCCTCCCCATGTACTAAATTGTCT 58.963 41.667 0.00 0.00 0.00 3.41
2847 2950 5.367945 TCCTCCCCATGTACTAAATTGTC 57.632 43.478 0.00 0.00 0.00 3.18
2848 2951 4.385310 GCTCCTCCCCATGTACTAAATTGT 60.385 45.833 0.00 0.00 0.00 2.71
2849 2952 4.137543 GCTCCTCCCCATGTACTAAATTG 58.862 47.826 0.00 0.00 0.00 2.32
2850 2953 3.181454 CGCTCCTCCCCATGTACTAAATT 60.181 47.826 0.00 0.00 0.00 1.82
2851 2954 2.368875 CGCTCCTCCCCATGTACTAAAT 59.631 50.000 0.00 0.00 0.00 1.40
2852 2955 1.760613 CGCTCCTCCCCATGTACTAAA 59.239 52.381 0.00 0.00 0.00 1.85
2853 2956 1.342674 ACGCTCCTCCCCATGTACTAA 60.343 52.381 0.00 0.00 0.00 2.24
2854 2957 0.260816 ACGCTCCTCCCCATGTACTA 59.739 55.000 0.00 0.00 0.00 1.82
2855 2958 0.617820 AACGCTCCTCCCCATGTACT 60.618 55.000 0.00 0.00 0.00 2.73
2856 2959 0.179081 GAACGCTCCTCCCCATGTAC 60.179 60.000 0.00 0.00 0.00 2.90
2857 2960 1.672854 CGAACGCTCCTCCCCATGTA 61.673 60.000 0.00 0.00 0.00 2.29
2858 2961 2.990479 GAACGCTCCTCCCCATGT 59.010 61.111 0.00 0.00 0.00 3.21
2859 2962 1.672854 TACGAACGCTCCTCCCCATG 61.673 60.000 0.00 0.00 0.00 3.66
2860 2963 1.380785 TACGAACGCTCCTCCCCAT 60.381 57.895 0.00 0.00 0.00 4.00
2861 2964 2.036098 TACGAACGCTCCTCCCCA 59.964 61.111 0.00 0.00 0.00 4.96
2862 2965 2.002509 GACTACGAACGCTCCTCCCC 62.003 65.000 0.00 0.00 0.00 4.81
2863 2966 1.432657 GACTACGAACGCTCCTCCC 59.567 63.158 0.00 0.00 0.00 4.30
2864 2967 1.062206 CGACTACGAACGCTCCTCC 59.938 63.158 0.00 0.00 42.66 4.30
2865 2968 4.666728 CGACTACGAACGCTCCTC 57.333 61.111 0.00 0.00 42.66 3.71
2871 2974 0.095245 TTAGGACGCGACTACGAACG 59.905 55.000 15.93 0.00 42.66 3.95
2872 2975 1.530646 CCTTAGGACGCGACTACGAAC 60.531 57.143 15.93 0.00 42.66 3.95
2873 2976 0.729116 CCTTAGGACGCGACTACGAA 59.271 55.000 15.93 1.12 42.66 3.85
2874 2977 0.108186 TCCTTAGGACGCGACTACGA 60.108 55.000 15.93 9.85 42.66 3.43
2875 2978 0.942962 ATCCTTAGGACGCGACTACG 59.057 55.000 15.93 12.23 37.25 3.51
2876 2979 4.201802 GCTATATCCTTAGGACGCGACTAC 60.202 50.000 15.93 0.00 32.98 2.73
2877 2980 3.937706 GCTATATCCTTAGGACGCGACTA 59.062 47.826 15.93 12.40 32.98 2.59
2878 2981 2.748532 GCTATATCCTTAGGACGCGACT 59.251 50.000 15.93 13.56 32.98 4.18
2879 2982 2.159407 GGCTATATCCTTAGGACGCGAC 60.159 54.545 15.93 6.56 32.98 5.19
2880 2983 2.089980 GGCTATATCCTTAGGACGCGA 58.910 52.381 15.93 0.00 32.98 5.87
2881 2984 1.816835 TGGCTATATCCTTAGGACGCG 59.183 52.381 1.74 3.53 32.98 6.01
2882 2985 3.195825 ACATGGCTATATCCTTAGGACGC 59.804 47.826 1.74 4.16 32.98 5.19
2883 2986 5.171476 CAACATGGCTATATCCTTAGGACG 58.829 45.833 1.74 0.00 32.98 4.79
2884 2987 5.491982 CCAACATGGCTATATCCTTAGGAC 58.508 45.833 1.74 0.00 32.98 3.85
2885 2988 5.762179 CCAACATGGCTATATCCTTAGGA 57.238 43.478 2.37 2.37 35.55 2.94
2899 3002 0.758123 AACAAGGGTTGCCAACATGG 59.242 50.000 10.18 0.00 41.55 3.66
2900 3003 3.181471 TGTTAACAAGGGTTGCCAACATG 60.181 43.478 10.18 7.69 37.88 3.21
2901 3004 3.034635 TGTTAACAAGGGTTGCCAACAT 58.965 40.909 10.18 0.00 37.88 2.71
2902 3005 2.457598 TGTTAACAAGGGTTGCCAACA 58.542 42.857 10.18 3.70 37.88 3.33
2903 3006 3.528597 TTGTTAACAAGGGTTGCCAAC 57.471 42.857 17.01 0.00 37.88 3.77
2904 3007 4.698575 GATTTGTTAACAAGGGTTGCCAA 58.301 39.130 19.72 3.81 37.88 4.52
2905 3008 4.329462 GATTTGTTAACAAGGGTTGCCA 57.671 40.909 19.72 4.51 37.88 4.92


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.