AutoCloner

Multiple sequence alignment - TraesCS5A01G090900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)

BLAST Results

Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

	qseqid	sseqid	percentage.identical	alignment.length	no.mismatch	no.gap.openings	qstart	qend	sstart	send	evalue	bitscore
0	TraesCS5A01G090900	chr5A	100.000	2486	0	0	1	2486	125140026	125137541	0.000000e+00	4591
1	TraesCS5A01G090900	chr5D	92.916	1214	63	11	627	1834	116747818	116749014	0.000000e+00	1744
2	TraesCS5A01G090900	chr5D	92.687	629	32	5	1864	2486	116750135	116750755	0.000000e+00	894
3	TraesCS5A01G090900	chr1A	98.736	633	8	0	1	633	366259810	366260442	0.000000e+00	1125
4	TraesCS5A01G090900	chr1A	98.720	625	8	0	2	626	11150984	11150360	0.000000e+00	1110
5	TraesCS5A01G090900	chr2A	98.882	626	7	0	1	626	238721647	238721022	0.000000e+00	1118
6	TraesCS5A01G090900	chr7A	98.880	625	7	0	1	625	542101406	542102030	0.000000e+00	1116
7	TraesCS5A01G090900	chr7A	98.720	625	8	0	1	625	648088699	648089323	0.000000e+00	1110
8	TraesCS5A01G090900	chr6B	98.724	627	8	0	1	627	21249464	21248838	0.000000e+00	1114
9	TraesCS5A01G090900	chr6B	97.227	649	15	3	1	648	138811716	138812362	0.000000e+00	1096
10	TraesCS5A01G090900	chr2B	98.565	627	9	0	1	627	305755376	305754750	0.000000e+00	1109
11	TraesCS5A01G090900	chr1B	98.567	628	8	1	1	627	673416511	673415884	0.000000e+00	1109
12	TraesCS5A01G090900	chr5B	93.770	610	29	6	713	1320	128471097	128471699	0.000000e+00	907
13	TraesCS5A01G090900	chr5B	91.558	462	21	4	1322	1775	130454391	130453940	2.720000e-174	621
14	TraesCS5A01G090900	chr5B	88.862	413	36	6	1799	2204	130453617	130453208	1.330000e-137	499
15	TraesCS5A01G090900	chr4D	86.074	517	51	14	986	1486	65172923	65172412	1.010000e-148	536

These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

	query	scaffold	start	end	length	rev.comp	avg.bitscore	max.bitscore	avg.percent.identical	query.start	query.end	num_hsp	groupid	homo_length
0	TraesCS5A01G090900	chr5A	125137541	125140026	2485	True	4591	4591	100.0000	1	2486	1	chr5A.!!$R1	2485
1	TraesCS5A01G090900	chr5D	116747818	116750755	2937	False	1319	1744	92.8015	627	2486	2	chr5D.!!$F1	1859
2	TraesCS5A01G090900	chr1A	366259810	366260442	632	False	1125	1125	98.7360	1	633	1	chr1A.!!$F1	632
3	TraesCS5A01G090900	chr1A	11150360	11150984	624	True	1110	1110	98.7200	2	626	1	chr1A.!!$R1	624
4	TraesCS5A01G090900	chr2A	238721022	238721647	625	True	1118	1118	98.8820	1	626	1	chr2A.!!$R1	625
5	TraesCS5A01G090900	chr7A	542101406	542102030	624	False	1116	1116	98.8800	1	625	1	chr7A.!!$F1	624
6	TraesCS5A01G090900	chr7A	648088699	648089323	624	False	1110	1110	98.7200	1	625	1	chr7A.!!$F2	624
7	TraesCS5A01G090900	chr6B	21248838	21249464	626	True	1114	1114	98.7240	1	627	1	chr6B.!!$R1	626
8	TraesCS5A01G090900	chr6B	138811716	138812362	646	False	1096	1096	97.2270	1	648	1	chr6B.!!$F1	647
9	TraesCS5A01G090900	chr2B	305754750	305755376	626	True	1109	1109	98.5650	1	627	1	chr2B.!!$R1	626
10	TraesCS5A01G090900	chr1B	673415884	673416511	627	True	1109	1109	98.5670	1	627	1	chr1B.!!$R1	626
11	TraesCS5A01G090900	chr5B	128471097	128471699	602	False	907	907	93.7700	713	1320	1	chr5B.!!$F1	607
12	TraesCS5A01G090900	chr5B	130453208	130454391	1183	True	560	621	90.2100	1322	2204	2	chr5B.!!$R1	882
13	TraesCS5A01G090900	chr4D	65172412	65172923	511	True	536	536	86.0740	986	1486	1	chr4D.!!$R1	500

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
659	663	0.037605	GTGTCATTCTTCGGACGGGT	60.038	55.0	0.0	0.0	36.83	5.28	F

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
1999	3426	0.96637	AGGTAAGGCGCTCGAGAAGT	60.966	55.0	18.75	0.0	0.0	3.01	R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
79	80	0.616111	TGGTGTGCTTGGTTGGGTTT	60.616	50.000	0.00	0.00	0.00	3.27
397	399	6.217693	AGTGGGTTGATTCTAAAAGGGATAGT	59.782	38.462	0.00	0.00	0.00	2.12
657	661	1.202582	AGAGTGTCATTCTTCGGACGG	59.797	52.381	0.00	0.00	36.83	4.79
659	663	0.037605	GTGTCATTCTTCGGACGGGT	60.038	55.000	0.00	0.00	36.83	5.28
665	669	0.108992	TTCTTCGGACGGGTGAATCG	60.109	55.000	0.00	0.00	0.00	3.34
675	679	4.319261	GGACGGGTGAATCGCATTAATTAC	60.319	45.833	0.00	0.00	0.00	1.89
676	680	3.562557	ACGGGTGAATCGCATTAATTACC	59.437	43.478	0.00	0.00	0.00	2.85
704	708	5.701750	AGTACTATCATCGAGCATTAGACGT	59.298	40.000	0.00	0.00	0.00	4.34
707	711	3.340337	TCATCGAGCATTAGACGTGAG	57.660	47.619	0.00	0.00	0.00	3.51
731	735	7.915930	AGGGATCATGTTAATTATGGAGAGAG	58.084	38.462	0.00	0.00	0.00	3.20
826	830	8.943909	AGGAGATAATTTACTTACCGAACAAG	57.056	34.615	0.00	0.00	0.00	3.16
846	850	3.251571	AGCTCACGACCTTAATTTCGTC	58.748	45.455	8.19	0.00	45.10	4.20
852	856	5.347635	TCACGACCTTAATTTCGTCAAGATG	59.652	40.000	8.19	0.00	45.10	2.90
864	868	9.573133	AATTTCGTCAAGATGAAAAATATCACC	57.427	29.630	18.23	0.00	45.88	4.02
897	901	4.860022	TGCATATCATCTCGGGATCTCTA	58.140	43.478	0.00	0.00	0.00	2.43
902	906	7.537715	CATATCATCTCGGGATCTCTATATGC	58.462	42.308	0.00	0.00	0.00	3.14
904	908	4.642437	TCATCTCGGGATCTCTATATGCAC	59.358	45.833	0.00	0.00	0.00	4.57
976	980	3.935315	TCACATCAAAGCTTCTCCTGAG	58.065	45.455	0.00	0.00	0.00	3.35
981	985	2.234908	TCAAAGCTTCTCCTGAGCTACC	59.765	50.000	0.00	0.00	38.01	3.18
982	986	2.235898	CAAAGCTTCTCCTGAGCTACCT	59.764	50.000	0.00	0.00	38.01	3.08
984	988	0.383949	GCTTCTCCTGAGCTACCTCG	59.616	60.000	0.00	0.00	41.13	4.63
985	989	1.757682	CTTCTCCTGAGCTACCTCGT	58.242	55.000	0.00	0.00	41.13	4.18
986	990	2.096248	CTTCTCCTGAGCTACCTCGTT	58.904	52.381	0.00	0.00	41.13	3.85
987	991	1.752683	TCTCCTGAGCTACCTCGTTC	58.247	55.000	0.00	0.00	41.13	3.95
991	995	3.280295	TCCTGAGCTACCTCGTTCTTAG	58.720	50.000	0.00	0.00	41.13	2.18
1024	1029	1.924939	TCCAAGGCCTGCATCCTGA	60.925	57.895	5.69	0.82	33.43	3.86
1033	1038	0.250381	CTGCATCCTGATCCTGCTCC	60.250	60.000	0.00	0.00	36.84	4.70
1072	1077	3.370978	CCATACAGGTACGCAAGAACAAG	59.629	47.826	0.00	0.00	43.62	3.16
1107	1118	3.243336	GTCGTCGCAGTTTAATCTCACT	58.757	45.455	0.00	0.00	0.00	3.41
1142	1156	0.250684	TGTGCCGTTGATGTGTCCAT	60.251	50.000	0.00	0.00	0.00	3.41
1324	1338	0.108615	CGAGGTGAAAGCGGTGATCT	60.109	55.000	0.00	0.00	40.95	2.75
1415	1431	1.750778	CTTCAACGGCAAGCCCATAAT	59.249	47.619	5.34	0.00	0.00	1.28
1498	1514	4.250464	CCTGGTGTGATCGTAGCTTTTTA	58.750	43.478	0.00	0.00	0.00	1.52
1503	1519	6.874664	TGGTGTGATCGTAGCTTTTTATTACA	59.125	34.615	0.00	0.00	0.00	2.41
1512	1528	8.396390	TCGTAGCTTTTTATTACACAAACACAA	58.604	29.630	0.00	0.00	0.00	3.33
1670	1691	6.811253	TTGTACGCTCATGAATAAAAAGGT	57.189	33.333	0.00	0.00	0.00	3.50
1722	1745	6.490241	TCTCTCTGATGATTGCTCCATAAA	57.510	37.500	0.00	0.00	0.00	1.40
1754	1777	7.429374	AGATCACTATGTTCCTGAGATTCAA	57.571	36.000	0.00	0.00	0.00	2.69
1780	1803	1.610624	CGCTAGTGAAAAGCCTTCCCA	60.611	52.381	0.00	0.00	36.60	4.37
1811	2133	2.777832	CTTCTAAGCAAGCTGGGTCT	57.222	50.000	0.00	0.00	0.00	3.85
1816	2138	0.538287	AAGCAAGCTGGGTCTTGGAC	60.538	55.000	0.00	0.00	42.68	4.02
1835	2157	7.502226	TCTTGGACATCTTTGACAACAACTATT	59.498	33.333	0.00	0.00	35.63	1.73
1836	2158	6.969366	TGGACATCTTTGACAACAACTATTG	58.031	36.000	0.00	0.00	35.63	1.90
1890	3315	1.967319	AAATGTCACTGTCGCACCTT	58.033	45.000	0.00	0.00	0.00	3.50
1999	3426	4.588106	TGATTCTGGGCTTTGAAACAATCA	59.412	37.500	0.00	0.00	35.85	2.57
2006	3433	4.222114	GGCTTTGAAACAATCACTTCTCG	58.778	43.478	0.00	0.00	37.92	4.04
2104	3536	7.147567	TGGCCTTTCTTCTAGAAAACCAAATTT	60.148	33.333	15.68	0.00	42.95	1.82
2115	3547	6.582636	AGAAAACCAAATTTCCCAAAGAGAC	58.417	36.000	0.00	0.00	39.59	3.36
2153	3585	0.030638	TGCACTTGCGAAAAAGAGCC	59.969	50.000	10.94	0.00	45.83	4.70
2177	3609	1.968704	TGCATTTGGTTCGGTACACA	58.031	45.000	0.00	0.00	0.00	3.72
2219	3651	1.366366	GCATGAGCCAATGCCCATC	59.634	57.895	9.53	0.00	45.93	3.51
2226	3658	1.890625	GCCAATGCCCATCTGCAACA	61.891	55.000	0.00	0.00	45.84	3.33
2234	3666	0.099968	CCATCTGCAACAAGCCATCG	59.900	55.000	0.00	0.00	44.83	3.84
2251	3683	3.304257	CATCGAATAGTCAAGGAGCGAG	58.696	50.000	0.00	0.00	0.00	5.03
2275	3707	1.521450	GCCATGAATCATCCCGCCTG	61.521	60.000	0.00	0.00	0.00	4.85
2276	3708	1.521450	CCATGAATCATCCCGCCTGC	61.521	60.000	0.00	0.00	0.00	4.85
2305	3737	4.058124	TGCACATATTTCTCGTAGCCATC	58.942	43.478	0.00	0.00	0.00	3.51
2309	3741	5.403766	CACATATTTCTCGTAGCCATCTGAC	59.596	44.000	0.00	0.00	0.00	3.51
2310	3742	2.561733	TTTCTCGTAGCCATCTGACG	57.438	50.000	0.00	0.00	37.93	4.35
2330	3762	1.743394	GGTGTCCCAAAAGATTAGCCG	59.257	52.381	0.00	0.00	0.00	5.52
2334	3766	1.631388	TCCCAAAAGATTAGCCGTGGA	59.369	47.619	0.00	0.00	0.00	4.02
2336	3768	2.423538	CCCAAAAGATTAGCCGTGGAAG	59.576	50.000	0.00	0.00	0.00	3.46
2337	3769	2.159379	CCAAAAGATTAGCCGTGGAAGC	60.159	50.000	0.00	0.00	0.00	3.86
2338	3770	1.369625	AAAGATTAGCCGTGGAAGCG	58.630	50.000	0.00	0.00	34.64	4.68
2339	3771	0.535335	AAGATTAGCCGTGGAAGCGA	59.465	50.000	0.00	0.00	34.64	4.93
2340	3772	0.179108	AGATTAGCCGTGGAAGCGAC	60.179	55.000	0.00	0.00	34.64	5.19
2341	3773	0.179108	GATTAGCCGTGGAAGCGACT	60.179	55.000	0.00	0.00	34.64	4.18
2342	3774	0.460284	ATTAGCCGTGGAAGCGACTG	60.460	55.000	0.00	0.00	34.64	3.51
2343	3775	1.812686	TTAGCCGTGGAAGCGACTGT	61.813	55.000	0.00	0.00	34.64	3.55
2344	3776	1.812686	TAGCCGTGGAAGCGACTGTT	61.813	55.000	0.00	0.00	34.64	3.16
2349	3781	1.335597	CGTGGAAGCGACTGTTGACTA	60.336	52.381	0.00	0.00	0.00	2.59
2405	3837	1.340017	ACGCAGCTACACCATCCAATT	60.340	47.619	0.00	0.00	0.00	2.32
2406	3838	1.064505	CGCAGCTACACCATCCAATTG	59.935	52.381	0.00	0.00	0.00	2.32
2442	3874	4.775058	TTTTGTATCAACCAACATCCGG	57.225	40.909	0.00	0.00	0.00	5.14

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
79	80	2.621407	GGAGGCCACATTCTTCCATGAA	60.621	50.000	5.01	0.00	0.00	2.57
363	365	2.363306	ATCAACCCACTGTTTGCTCA	57.637	45.000	0.00	0.00	34.00	4.26
641	643	0.037697	CACCCGTCCGAAGAATGACA	60.038	55.000	0.00	0.00	0.00	3.58
657	661	6.038271	ACTTCAGGTAATTAATGCGATTCACC	59.962	38.462	0.00	0.00	0.00	4.02
659	663	7.985184	AGTACTTCAGGTAATTAATGCGATTCA	59.015	33.333	0.00	0.00	31.56	2.57
675	679	4.837896	TGCTCGATGATAGTACTTCAGG	57.162	45.455	0.00	2.35	0.00	3.86
676	680	7.748683	GTCTAATGCTCGATGATAGTACTTCAG	59.251	40.741	0.00	0.00	0.00	3.02
691	695	0.738975	TCCCTCACGTCTAATGCTCG	59.261	55.000	0.00	0.00	0.00	5.03
704	708	7.513781	TCTCTCCATAATTAACATGATCCCTCA	59.486	37.037	0.00	0.00	35.41	3.86
707	711	7.684529	ACTCTCTCCATAATTAACATGATCCC	58.315	38.462	0.00	0.00	0.00	3.85
731	735	3.802685	CCTCCCGTTCGAAGAAATGATAC	59.197	47.826	0.00	0.00	45.90	2.24
743	747	3.612004	GCTATTAGTGATCCTCCCGTTCG	60.612	52.174	0.00	0.00	0.00	3.95
846	850	8.208718	TCTTACCGGTGATATTTTTCATCTTG	57.791	34.615	19.93	0.00	0.00	3.02
852	856	8.564574	TGCAATATCTTACCGGTGATATTTTTC	58.435	33.333	26.19	20.27	41.30	2.29
897	901	2.737180	CTCCCGGCTCGTGCATAT	59.263	61.111	12.07	0.00	41.91	1.78
940	944	7.378995	GCTTTGATGTGATGAAGATTGATTAGC	59.621	37.037	0.00	0.00	0.00	3.09
976	980	3.440228	CTGAAGCTAAGAACGAGGTAGC	58.560	50.000	0.00	0.00	40.47	3.58
981	985	2.370281	TGGCTGAAGCTAAGAACGAG	57.630	50.000	1.74	0.00	41.70	4.18
982	986	2.621338	CATGGCTGAAGCTAAGAACGA	58.379	47.619	1.74	0.00	41.70	3.85
984	988	1.403323	GCCATGGCTGAAGCTAAGAAC	59.597	52.381	29.98	0.00	41.70	3.01
985	989	1.755179	GCCATGGCTGAAGCTAAGAA	58.245	50.000	29.98	0.00	41.70	2.52
986	990	0.462581	CGCCATGGCTGAAGCTAAGA	60.463	55.000	33.07	0.00	41.70	2.10
987	991	0.745845	ACGCCATGGCTGAAGCTAAG	60.746	55.000	33.07	17.04	41.70	2.18
991	995	3.512516	GGACGCCATGGCTGAAGC	61.513	66.667	33.07	17.00	39.32	3.86
1024	1029	3.392228	TGCAACGAGGAGCAGGAT	58.608	55.556	0.00	0.00	35.51	3.24
1033	1038	0.037882	TGGAGAAGAGCTGCAACGAG	60.038	55.000	1.02	0.00	42.41	4.18
1072	1077	2.718027	GCGACGACGACCAAGTATTATC	59.282	50.000	12.29	0.00	42.66	1.75
1142	1156	0.744874	GTCGCCACTAGCATGACCTA	59.255	55.000	0.00	0.00	44.04	3.08
1314	1328	2.885861	GTGTCCGAGATCACCGCT	59.114	61.111	0.00	0.00	0.00	5.52
1324	1338	2.649034	GAGCTTGGTCGTGTCCGA	59.351	61.111	0.00	0.00	41.73	4.55
1415	1431	3.166490	TTGGCGGCGTAGGTGAACA	62.166	57.895	9.37	0.00	0.00	3.18
1498	1514	8.940768	AATAAAGTTGCTTGTGTTTGTGTAAT	57.059	26.923	0.00	0.00	0.00	1.89
1503	1519	7.491048	CCAAGTAATAAAGTTGCTTGTGTTTGT	59.509	33.333	14.44	0.00	39.45	2.83
1512	1528	9.569122	TTCTTACTTCCAAGTAATAAAGTTGCT	57.431	29.630	11.46	0.00	46.87	3.91
1690	1711	6.270463	AGCAATCATCAGAGAGATTGGAGTAT	59.730	38.462	21.28	0.00	46.92	2.12
1722	1745	2.160721	ACATAGTGATCTCGGGGTGT	57.839	50.000	0.00	0.00	0.00	4.16
1754	1777	2.237392	AGGCTTTTCACTAGCGGAGATT	59.763	45.455	0.00	0.00	39.54	2.40
1804	2126	3.077359	GTCAAAGATGTCCAAGACCCAG	58.923	50.000	0.00	0.00	0.00	4.45
1811	2133	7.284261	TCAATAGTTGTTGTCAAAGATGTCCAA	59.716	33.333	0.00	0.00	35.20	3.53
1816	2138	7.061441	GTGCATCAATAGTTGTTGTCAAAGATG	59.939	37.037	0.00	0.00	35.20	2.90
1835	2157	2.300433	GAAGCATATGTGGGTGCATCA	58.700	47.619	0.00	0.00	43.63	3.07
1836	2158	2.292569	CTGAAGCATATGTGGGTGCATC	59.707	50.000	4.29	0.00	43.63	3.91
1914	3339	9.173939	GTATCATGCAAAAGTAAATACTGATGC	57.826	33.333	17.37	17.37	43.39	3.91
1942	3367	4.017499	ACAATAAATGGCTTCCACCCTAGT	60.017	41.667	0.00	0.00	35.80	2.57
1965	3390	2.616256	GCCCAGAATCACACATGAGACA	60.616	50.000	0.00	0.00	38.57	3.41
1999	3426	0.966370	AGGTAAGGCGCTCGAGAAGT	60.966	55.000	18.75	0.00	0.00	3.01
2006	3433	2.202946	GGCAGAGGTAAGGCGCTC	60.203	66.667	7.64	0.00	0.00	5.03
2104	3536	6.156775	TCAAGTATGATCATGTCTCTTTGGGA	59.843	38.462	18.72	8.21	0.00	4.37
2115	3547	5.816258	AGTGCAGTTCTCAAGTATGATCATG	59.184	40.000	18.72	2.90	34.37	3.07
2153	3585	4.208253	GTGTACCGAACCAAATGCAAAAAG	59.792	41.667	0.00	0.00	0.00	2.27
2205	3637	1.324740	TTGCAGATGGGCATTGGCTC	61.325	55.000	10.31	0.80	44.48	4.70
2219	3651	2.679837	ACTATTCGATGGCTTGTTGCAG	59.320	45.455	0.00	0.00	45.15	4.41
2226	3658	3.742640	GCTCCTTGACTATTCGATGGCTT	60.743	47.826	0.00	0.00	0.00	4.35
2234	3666	2.166664	ACCACTCGCTCCTTGACTATTC	59.833	50.000	0.00	0.00	0.00	1.75
2251	3683	1.035139	GGGATGATTCATGGCACCAC	58.965	55.000	3.32	0.00	0.00	4.16
2276	3708	5.973651	ACGAGAAATATGTGCACACTATG	57.026	39.130	24.37	12.26	0.00	2.23
2305	3737	2.185004	ATCTTTTGGGACACCGTCAG	57.815	50.000	0.00	0.00	39.29	3.51
2309	3741	1.743394	GGCTAATCTTTTGGGACACCG	59.257	52.381	0.00	0.00	39.29	4.94
2310	3742	1.743394	CGGCTAATCTTTTGGGACACC	59.257	52.381	0.00	0.00	39.29	4.16
2330	3762	2.433868	TAGTCAACAGTCGCTTCCAC	57.566	50.000	0.00	0.00	0.00	4.02
2334	3766	2.480419	GCACAATAGTCAACAGTCGCTT	59.520	45.455	0.00	0.00	0.00	4.68
2336	3768	1.128692	GGCACAATAGTCAACAGTCGC	59.871	52.381	0.00	0.00	0.00	5.19
2337	3769	2.412870	TGGCACAATAGTCAACAGTCG	58.587	47.619	0.00	0.00	31.92	4.18
2405	3837	7.230747	TGATACAAAATCAGGAGAGAAAACCA	58.769	34.615	0.00	0.00	0.00	3.67
2406	3838	7.687941	TGATACAAAATCAGGAGAGAAAACC	57.312	36.000	0.00	0.00	0.00	3.27
2442	3874	7.472543	GGTTTTTCACCATGAGATATGTGTAC	58.527	38.462	0.00	0.00	46.42	2.90

Based at the University of Bristol with support from BBSRC.

AutoCloner maintained by Alex Coulton.