>input_sequence_78693
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--------------------------------------------ATGGCGTCCAAGGCCTGCATCCTGATCCTGCTCCTC
GTTGCAGCTCTTCTCCATACAGGTACGCAAGAACAAGATAATACTTGG--TCGTCGTCGCAGTTTAATCTCAC----TGA
TCCTTGGATCTTAT---GTGCCGTTGATGTGTCCATAGGTCATGCTAGTGGCGACGCCGGGCCGTGCCAACTGGAGGACA
TCCGCGTCTCGTCGGTGTTGACGGGGCGGCGGGTCCTGAATGTGCCGGAGTACAGCGTGACGGTGGAGAACACGTGCTCG
TGCGCGCAGGCGGGCGTGGTGATGTACTGCAACCTCGGCGAGGTGAAAGCGGTGATCTCGGACACGACCAAGCTCCGCCT
GCTGAGCCGGAAGCAAGGGCACTGCCTCATCAACAGCGGCTGGCCGATCTTCAACGGCAAGCCC--ATAATGTTCACCTA
CGCCGCCAAGACGCAGCTCGACTTCACCCTCGATAACGCCTCGCCGGAGTGCCTGGTGTGA-------------------
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>chr5A_1_TraesCS5A01G090900
ATTTGTGGATCGATGGCGGGTCTTGACTTTGTTAGGCTGGGATTGGATGGTTGCGGAGGGTGGTGTGCTTGGTTGGGTTT
TCATGGAAGAATGTGGCCTCCTCGTGGATCTGGTCATGCCCATCCTAGAGAACATTGTGTCCCTAGCTCCCTCGAGGAGC
AAGGACAGTGCAAGCGGCAGCAGGGGGTAGGGGTAGATGTGGGGAGGGATGTCGGCGGCTGCTCGAGGTCATCATGATGA
AACCCTTGACGTCCCATCTTTATCAATGGAAGTGGAAGAGCACGAAGTCGAGATTGGATAGGAGTTTGAGTTCTTTTTGG
CACCGATCGGTTCCCCACTTTAGAGATGTATTTTTT-TTGTGTGTGAGCAAACAGTGGGTTGATTCTAAAAGGGATAGTC
ACTTTTCAACAGAAGTGCATGACGGACTAAAAATATGACCTTATTTTATTCGTTTGATAGATATCGTATTATTCGTTGTT
GTTCGTTCGGTGAAATTTCCTAATATTTGATTGTTGTGTTTCTAATTAGAGCACCCCATAATCACCCAATATGAGGGGAT
GATAAATGAAAGATACTGATTATAAATTTTGAAGAGCCCGTGGCAACGCACGGGCGTTATACTAGTTACGTTAATTATAG
AGTG--TCATTCTTCGGACGGGTGAATCGCATTAATTACCTGAAGTACTATCATCGAGCATTAGACGTGAGGGATCATGT
TAATTATGGAGAGAGTATCATTTCTTCGAACGGGAGGATCACTAATAGCCCTGAAGATAGAAGGAATTAATGCACCGATT
CTGTAGGAGATAATTTACTTACCGAACAAGCTCACGACCTTAATTTCGTCAAGATGAAAAATATCACCGGTAAGATATTG
CATATCATCTCGGGATCTCTATATGCACGAGCCGGGAGCTCTATATATAGCTGGCCAAGCTACGCTAATCAATCTTCATC
ACATCAAAGCTTCTCCTGAGCTACCTCGTTCTTAGCTTCAGC-CATGGCGTCCAAGGCCTGCATCCTGATCCTGCTCCTC
GTTGCAGCTCTTCTCCATACAGGTACGCAAGAACAAGATAATACTTGG--TCGTCGTCGCAGTTTAATCTCAC----TGA
TCCTTGGATCTTAT---GTGCCGTTGATGTGTCCATAGGTCATGCTAGTGGCGACGCCGGGCCGTGCCAACTGGAGGACA
TCCGCGTCTCGTCGGTGTTGACGGGGCGGCGGGTCCTGAATGTGCCGGAGTACAGCGTGACGGTGGAGAACACGTGCTCG
TGCGCGCAGGCGGGCGTGGTGATGTACTGCAACCTCGGCGAGGTGAAAGCGGTGATCTCGGACACGACCAAGCTCCGCCT
GCTGAGCCGGAAGCAAGGGCACTGCCTCATCAACAGCGGCTGGCCGATCTTCAACGGCAAGCCC--ATAATGTTCACCTA
CGCCGCCAAGACGCAGCTCGACTTCACCCTCGATAACGCCTCGCCGGAGTGCCTGGTGTGATCGTAGCTTTTTATTACAC
AAACACAAGCAACTTTAT----TACTTGGAAGTAAGAATGTTTAAAGGTACAGAAATAGGGTCGTAGGAATGACCAGGCC
AAATATGGCGTCCTGTACCTAAAGACGACGTGTCCTTTGCAAGGCTATGCGCCTTGAAATTAAAGTTTGTACGCTCATGA
ATAAAAA-GGTAACTGTCAAAAGATGATTTATACTC--CAATCTCTCTGATGATTGCTCCATAAACACCCCGAGATCACT
ATGTTCCTGAGATTCAAATCTCCGCTAGTGAAAAGCCTTCCCAACACGCCAAAGCTT-----------------------
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------------------------------------CTAAGCAAGCTGGGTCTTGGACATCTTTGACAACAACTATTGAT
GCACCCACATATGCTTCAGTAATATC------------------------------------------------------
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---------ACTGTAAAATGTCACTGTCGCACCTTTTGTGCCCGCTCGGGCAAAGGCCGCATCAGTATTTACTTTTGCAT
GATACAACTAGGGTGGAAGCCATTTATTGT--GTCTCATGTGTGATTCTGGGCTTTGAAACAATCACTTCTCGAGCGCCT
-TACCTCTGCCAAATATATTTTTATGAATTGATGCGTTG---ATGGACTCTGAAAGATGTTCCA-TGGATGGCCTTTCTT
CTAGAAAACCAAATTTCCCAAAGAGACATGATCATACTTGAGAACTGCACTTGCGAAAAAGAGCCTTTTTGCATTTGGTT
CGGTACACACTGGCATGCTTGCAGTCAAGATCGCATGAGCCAATGCCCATCTGCAACAAGCCATCGAATAGTCAAGGAGC
GAGTGGTGCCATGAATCATCCCGCCTGCATAGTGTGCACATATTTCTCGTAGCCATCTGACGGTGTCCCAAAAGATTAGC
CGTGGAAGCGACTGTTGACTATTGTGCCAAACGCCAGATGAACACCTTCAACTTGAACGCAGCTACACCATCCAATTGGT
TTTCTCTCCTGATTTTGTATCAACCAACATCCGGTACACATATCTCATGGTGAAAAACCCTTTAGGCTCCGAATGCC
>chr1A_1
ATTTGTGGATCGATGGCGGGTCTTGACTTTGTTAGGCTGGGATTGGATGGTTGCGGAGGGTGGTGTGCTTGGTTGGGTTC
CCATGGAAGAATGTGGCCTCCTCGTGGATCTGGTCATGCCCATCCTAGAGAACATTGTGTCCCTAGCTCCCTCGAGGAGC
AAGGACAGTGCAAGCGGCAGCAGGGGGTAGGGGTAGATGTGGGGAGGGATGTCGGCGGCTGCTCGAGGTCATCATGATGA
AACCCTTGACGTCCCATCTTTATCAATGGAAGTGGAAGAGCACGAAGTCGAGATTGGATAGGAGTTTGAGTTCTTTTTGG
CACCGATCGGTTCCCCACTTTAGAGATGTATTTTTT-TTGCGTGCGAGCAAACAGTGGGTTGATTCTAAAAGGGATAGGC
ACTTTTCAACAGAAGTGCATGACGGACCAAAAATATGACCTTATTTTATTCGTTTGATAGATATCGTATTATTCGTTGTT
GTTCGTTCGGTGAAATTTCCTAATATTTGATTGTTGTGTTTCTAATTAGAGCACCCCATAATCACCCAATATGAGGGGAT
GATAAATGAAAGATACTGATTATAAATTTTGAAGAGCCCGTGGCAACGCACGGGCGTTATACTAGTA-------------
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------------------------------------ACCTTAA-------------------------------------
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>chr2A_1
ATTTGTGGATCGATGGCGGGTCTTGACTTTGTTAGGCTGGGATTGGATGGTTGCGGAGGGTGGTGTGCTTGGTTGGGTTC
CCATGGAAGAATGTGGCCTCCTCGTGGATCTGGTCATGCCCATCCTAGAGAACATTGTGTCCCTAGCTCCCTCGAGGAGC
AAGGACAGTGCAAGCGGCAGCAGGGGGTAGGGGTAGATGTGGGGAGGGATGTCGGCGGCTGCTCGAGGTCATCATGATGA
AACCCTTGACGTCCCATCTTTATCAATGGAAGTGGAAGAGCACGAAGTCGAGATTGGATAGGAGTTTGAGTTCTTTTTGG
CACCGATCGGTTCCCCACTTTAGAGATGTATTTTTT-TTGCGTGCGAGCAAACAGTGGGTTGATTCTAAAAGGGATAGGC
ACTTTTCAACAGAAGTGCATGACGGACCAAAAATATGACCTCATTTTATTCGTTTGATAGATATCGTATTATTCGTTGTT
GTTCGTTCGGTGAAATTTCCTAATATTTGATTGTTGTGTTTCTAATTAGAGCACCCCATAATCACCCAATATGAGGGGAT
GATAAATGAAAGATACTGATTATAAATTTTGAAGAGCCCGTGGCAACGCACGGGCGTTATACTAGTT-------------
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>chr7A_1
ATTTGTGGATCGATGGCGGGTCTTGACTTTGTTAGGCTGGGATTGGATGGTTGCGGAGGGTGGTGTGCTTGGTTGGGTTC
CCATGGAAGAATGTGGCCTCCTCGTGGATCTGGTCATGCCCATCCTAGAGAACATTGTGTCCCTAGCTCCCTCGAGGAGC
AAGGACAGTGCAAGCGGCAGCAGGGGGTAGGGGTAGATGTGGGGAGGGATGTCGGCGGCTGCTCGAGGTCATCATGATGA
AACCCTTGACGTCCCATCTTTATCAATGGAAGTGGAAGAGCACGAAGTCGAGATTGGATAGGAGTTTGAGTTCTTTTTGG
CACCGATCGGTTCCCCACTTTAGAGATGTATTTTTT-TTGTGTGCGAGCAAACAGTGGGTTGATTCTAAAAGGGATAGGC
ACTTTTCAACAGAAGTGCATGACGGACCAAAAATATGACCTCATTTTATTCGTTTGATAGATATCGTATTATTCATTGTT
GTTCGTTCGGTGAAATTTCCTAATATTTGATTGTTGTGTTTCTAATTAGAGCACCCCATAATCACCCAATATGAGGGGAT
GATAAATGAAAGATACTGATTATAAATTTTGAAGAGCCCGTGGCAACGCACGGGCGTTATACTAGT--------------
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>chr7A_1
ATTTGTGGATCGATGGCGGGTCTTGACTTTGTTAGGCTGGGATTGGATGGTTGCGGAGGGTGGTGTGCTTGGTTGGGTTC
TCATGGAAGAATGTGGCCTCCTCGTGGATCTGGTCATGCCCATCCTAGAGAACATTGTGTCCCTAGCTCCCTCGAGGAGC
AAGGACAGTGCAAGCGACAGCAGGGGGTAGGGGTAGATGTGGGGAGGGATGTCGGCGGCTGCTCGAGGTCATCATGATGA
AATCCTTGACGTCCCATCTTTATCAATGGAAGTGGAAGAGCACGAAGTCGAGATTGGATAGGAGTTTGAGTTCTTTTTGG
CACCGATCGGTTCCCCACTTTAGAGATGTATTTTTT-TTGCGTGCGAGCAAACAGTGGGTTGATTCTAAAAGGGATAGGC
ACTTTTCAACAGAAGTGCATGACGGACCAAAAATATGACCTCATTTTATTCGTTTGATAGATATCGTATTATTCGTTGTT
GTTCGTTCGGTGAAATTTCCTAATATTTGATTGTTGTGTTTCTAATTAGAGCACCCCATAATCACCCAATATGAGGGGAT
GATAAATGAAAGATACTGATTATAAATTTTGAAGAGCCCGTGGCAACGCACGGGCGTTATACTAGT--------------
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-----------------------------------------------------------------------------
>chr6B_1
ATTTGTGGATCGATGGCGGGTCTTGACTTTGTTAGGCTGGGATTGGATGGTTGCGGAGGGTGGTGTGCTTGGTTGGGTTC
CCATGGAAGAATGTGGCCTCCTCGTGGATCTGGTCATGCCCATCCTAGAGAACATTGTGTCCCTAGCTCCCTCGAGGAGC
AAGGACAGTGCAAGCGGCAGCAGGGGGTAGGGGTAGATGTGGGGAGGGATGTCGGCGGCTGCTCGAGGTCATCATGATGA
AACCCTTGACGTCCCATCTTTATCAATGGAAGTGGAAGAGCACGAAGTCGAGATTGGATAGGAGTTTGAGTTCTTTTTGG
CACCGATCGGTTCCCCACTTTAGAGATGTATTTTTT-TTGCGTGCGAGCAAACAGTGGGTTGATTCTAAAAGGGATAGGC
ACTTTTCAACAGAAGTGCATGACAGACCAAAAATATGACCTCATTTTATTCGTTTGATAGATATCGTATTATTCGTTGTT
GTTCGTTCGGTGAAATTTCCTAATATTTGATTGTTGTGTTTCTAATTAGAGCACCCCATAATCACCCAATATGAGGGGAT
GATAAATGAAAGATACTGATTATAAATTTTGAAGAGCCCGTGGCAACGCACGGGCGTTATACTAGTTA------------
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-----------------------------------------------------------------------------
>chr6B_1
ATTTGTGGATCGATGGCGGGTCTTGACTTTGTTAGGCTGGGATTGGATGGTTGCGGAGGGTGGTGTGCTTGGTTGGGTTC
CCATGGAAGAATGTGGCCTCCTCGTGGATCTGGTCATGCCCATCCTAGAGAACATTGTGTCCCTAGCTCCCTCGAGGAGC
AAGGATAGTGCAAGCGGCAGCAGGGGGTAGGGGTAGATGTGGGGAGGGATGTCGGCGGCTGCTCGAGGTCATCATGATGA
AACCCTTGACGTCCCATCTTTATCAATGGAAGTGGAAGAGCACGAAGTCGAGATTGGATAGGAGTTTGAGTTCTTTTTGG
CACCGATCGGTTCCCCACTTTAGAGATGTATTTTTT-TTGCGTGCGAGCAAACAGTGGGTTGATTCTAAAAGGGATAGGC
ACTTTTCAACAGAAGTGCATGACGGACCAAAAATATGACCTCATTTTATTCGTTTGATAGATATCGTATTATTCGTTGTT
GTTCGTTCGGTGAAATTTCCTAATATTTGATTGTTGTGTTTCTAATTAGAGCACCCCATAATCACTCAATATGAGGGGAT
GATAAATAAAAGATATTGATTATAAATTTTGAAGAGCCCGTGGCAACGCACGGGCGTTATACTAGT--------------
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----------------------------------------GTAAATAAATAATGAGTTCATT------------------
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-----------------------------------------------------------------------------
>chr2B_1
ATTTGTGGATCGATGGCGGGTCTTGACTTTGTTAGGCTGGGATTGGATGGTTGCGGAGGGTGGTGTGCTTGGTTGGGTTC
CCATGGAAGAATGTGGCCTCCTCGTGGATCTGGTCATGCCCATCCTAGAGAACATTGTGTCCCTAGCTCCCTCGACGAGC
AAGGACAGTGCAAGCGGCAGCAGGGGGTAGGGGTAGATGTGGGGAGGGATGTCGGCGGCTGCTCGAGGTCATCATGATGA
AACCCTTGACGTCCCATCTTTATCAATGGAAGTGGAAGAGCACGAAGTCGAGATTGGATAGGAGTTTGAGTTCTTTTTGG
CACCGATCGGTTCCCCACTTTAGAGATGTATTTTTT-TTGCGTGCGAGCAAACAGTGGGTTGATTCTAAAAGGGATAGGC
ACTTTTCAACAGAAGTGCATGACGGACCAAAAATATGACCTCATTTTATTCGTTTGATAGATATCGTATTATTCGTTGTT
GTTCGTTCGGTGAAATTTCCTAATATTTGATTGTTGTGTTTCTAATTAGAGCACCCCATAATCACCCAATATGAGGGGAT
GACAAATGAAAGATACTGATTATAAATTTTGAAGAGCCCGTGGCAACGCACGGGCGTTATACTAGTTA------------
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>chr1B_1
ATTTGTGGATCGATGGCGGGTCTTGACTTTGTTAGGCTGGGATTGGATGGTTGCGGAGGGTGGTGTGCTTGGTTGGGTTC
CCATGGAAGAATGTGGCCTCCTCGTGGATCTGGTCATGCCCATCCTAGAGAACATTGTGTCCCTAGCTCCCTCGAGGAGC
AAGGACAGTGCAAGGGGCAGCAGGGGGTAGGGGTAGATGTGGGGAGGGATGTCGGCGGCTGCTCGAGGTCATCATGATGA
AACCCTTGACGTCCCATCTTTATCAATGGAAGTGGAAGAGCACGAAGTCGAGATTGGATAGGAGTTTGAGTTCTTTTTGG
CACCGATCGGTTCCCCACTTTAGAGATGTATTTTTTTTTGCGTGCGAGCAAACAGTGGGTTGATTCTAAAAGGGATAGGC
ACTTTTCAACAGAAGTGCATGACGGACCAAAAATATGACCTCATTTTATTCGTTTGATAGATATCGTATTATTCGTTGTT
GTTCGTTCGGTGAAATTTCCTAATATTTGATTGTTGTGTTTCTAATTAGAGCACCCCATAATCACCCAATATGAGGGGAT
GATAAATGAAAGATACTGATTATAAATTTTGAAGAGCCCGTGGCAACGCACGGGCGTTATACTAGTTA------------
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>chr1A_2
-TTTGTGGATCGATGGCGGGTCTTGACTTTGTTAGGCTGGGATTGGATGGTTGCGGAGGGTGGTGTGCTTGGTTGGGTTC
CCATGGAAGAATGTGGCCTCCTCGTGGATCTGGTCATGCCCATCCTAGAGAACATTGTGTCCCTAGCTCCCTCGAGGAGC
AAGGACAGTGCAAGCGGCAGCAGGGGGTAGGGGTAGATGTGGGGAGGGATGTCGGCGGCTGCTCGAGGTCATCATGATGA
AACCCTTGACGTCCCATCTTTATCAATGGAAGTGGAAGAGCACGAAGTCGAGATTGGATAGGAGTTTGAGTTCTTTTTGG
CACCGATCGGTTCCCCACTTTAGAGATGTATTTTTTTT-GCGTGCGAGCAAACAGTGGGTTGATTCTAAAAGGGATAGGC
ACTTTTCAACAGAAGTGCATGACGGACCAAAAATATGACCTCATTTTATTCGTTTGATAGATATCGTATTATTCGTTGTT
GTTCGTTCAGTGAAATTTCCTAATATTTGATTGTTGTGTTTCTAATTAGAGCACCCCATAATCACCCAATATGAGGGGAT
GATAAATGAAAGATACTGATTATAAATTTTGAAGAGCCCGTGGCAACGCACGGGCGTTATACTAGTT-------------
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>chr5D_627
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-------------------------------------------------------------------ACGTTAATTATAG
AGAGTATCATTCTTCGGACGTGAGAATCACATTAATTATGTGAAGTACTATCATTGAGCATTAGACGGGA-GGATCATGT
TAATTATGGAGAGAATATCATTTCC-TGAACGGGAGGATCACTAATAGCCCTGAAGATAGAAGGAATTAATGCACCGATT
CTGTAGGAGATAATTTACTTACCGAACAACCTCACGACCTTAATTTTGTTAAGATAAAAAATAACACTGGTAAGATATTG
CATATCATCTCGGGATCTCTGTATGTATGAGCCGGGAGCTCTATATGTAGCTGGCCAAGCTACCCTAATCAATCTTCATC
ACATCAAAG----------ACTACTCCTACATTA----CAGG-CATGGCGTCCAAGGCCTGCATCCTGGTCCTGCTCTTC
GTTGCAGCTCTTCTCCATACAGGTACGCAAGAACAATGTAATACTTGG--TCGTCGTCGCAGTTTAATCTCAC----CGA
TCCTTGGATCTTAT---GTGCCGTTGATGTGTCCACAGGTCATGCTATTGGCGACGCCGGGCCGTGCCAACTGGAGGACA
TCCGCGTCTCGTCGGTGTTGACGGGGCGGCTGGTCCGGAATGTGCCGGAGTACAGCGTGACGGTGGAGAACACGTGCTCG
TGCCCGCAGGGGGCCGTGGTGATGTACTGCAACCTCGGCGAGGTGAACGCGGTGATCCCGGACACGACCAAGCTCCGCCT
GCTCAGCCGAAAGCAAGGGCACTGCCTCATCAACAGCGGCTGGCTGATCTTCAAGGACAAGCCC--ATAACGTTCACCTA
CGCCGCCAAGACGCAGCTCGACTTCACCCTCGATAACGCCTCGCCGGAGTGCCTGGTGTGATCGTAGCTTTTTTTTACGC
AAACACACGCAACGTTAT----TACTTGGAAGCAAGAATGTTTAAAGGTACAGAAATAGGGTCGTAGGAATGACCAGGCC
AAATATGGCGTCTTGTACCTAAAGACGACGTGTCCTTTGCAAGGCCATGGACCTTGAAATTAAAGTTTGTACGCTCATGA
ATAAAAAAGGCAACTGTCAAAAGATGATTTCTACTCCGCAATCCCTCTGATGATTGCTCCATAAGCACCCCGTGATCACT
ATGTTCCTGAGATTCAGATCTCCGCTAGTGAAAAGCCTTCCCGACACACCAAAGCTT-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------CTAAGCAAGATGGGTCCTGGATATCTTTGACAACAACTA-----
-------CATATGCTCCAGTAATATCTCTACTCCTAATGGAGCAGTTGGTAGTCTCGCTTTCAGGTTTTTTTTCGTCCCA
CCTCCCATGATTTTTGTTGGTACCTCCTCCCATCTTTGCTGGGTTTTTTTCGTAGATTTTTTTTCATCCCCTCCCCCACT
TCATCGGTTTATTTTCGCGTCATCCTCTCACACAACAAAAAAAACTGAACAAATCAGAACTTTCCATACTGGCGCAAGTT
ATTTAGTAATGTAGAATCAATCACGAACAATCTATAAAGATCAAATCTAAATTAATTAACCTTACCTTCAATCACTCAAT
CACATTAATTAGAAAACAAATAATTGATTTTCAGAAAAATCGCTCAATCATGTTGACCTTACCTTAACTCACGGATGGTA
ATCAATCTCCAAACAAAGGAAACAATACATCGAGGGAGCAGTAAATAAACTCCCCTTCTTATGACAAATATATGATATTC
CCTTCCCTCTCCGTTGTCGAGCGTTTTTGATTCTTGAGGCCGATGCTTGGGCTGCGTCACTGGGTTGCGACGGTGCCGGA
GGACAAGGACGGCGAGGCCGGGTGCCGTGGCACCGCGTTGGCCGCGGCCGGTGAAGGGGGCGAAGAAGGGCGGCTTCCCT
GGCCCTGGCTGTGGCCGTGGCCCTGGGAGTTGGTGCGGTGGAAGCGGCACTTGAAGGACTCGGCGTGGGCGCCGGCGCGC
AGACGCACTTGGAAGCGGGCCCGTGGCCCGCGCCGGACGGTGCCGACGCCGACCCGGGCCACCTCCTCCGCGTATTCTTG
GAGCTGTGGCTGGCCGATTTACATGAAATTAATTCTCTCAGTTGTGGTGGCAAATATAATACACATAATCCATATTGTTA
TGCACTAGCGTGTGTGTGTGAAATAGATGAATTATGGTCCTGTACCCAATAAGATGGATGTGTGTGTGTGTTAGAGAGAG
AGAGGGAGAGGGGAGAGAGAGTGAGGAAGAGGGAGGGAGAGAGAGTGTGTGTGAGGATTTGATGATAAAAAAGATCGCCA
ATGTCACTTGATATGTATGAGAATATTATTAATATTGAACTCTTAAAGTTAATGTAGACCCGTTGCAACGCACGGGCGTT
CTTCTAGTCACTGTAGAATGTCACTGTCGCACCTCTTGTGCCCGCTCGGGCAAAGGACCCATCAATATTTACTTTTGCAT
GATACAGCTAGGGTGGAAGCCATTTATTGCGAGTCTCATGTGTGATTATGGGCTTTGAAACAATCGCTTCTCCAGCGTCT
-TACCTCTGCCATATATATTTTCATGAATTGATGCGTTGAAGATGGACTCTGAAAGATGTTCCA-TGGATGGCCTTTCTT
CTAGAAAACCAAATTGCCCAAAGAGAGATGATCATACTTAAGAACTGCACTTGTGAAAAAGAGCTTTTTTGCATTTGGTT
CGGTACACGCTGGCATGCTTGCAGTCAAGATCGCATCAGCCAATGCCCATGTGCAACGAGCCATCAAATAGTCAAGGAGC
GACTGGTGCCATGAATCATCCCGCCTAAATAGTGTGCACATATTTCTCGTAGCCATGTGAT-GTGTCCCAAAAGATTAGC
CATGGGAAGC------GACTGTTGTGCCAAACGCCAGATGAACACCTTCAACTTGAACGCAGCTACACCATCCAATCAGT
TTTCTCTCCTGATTTTGTATCAACCAACATCCGTTACACATATCTCATGGTGAAAAACCCTTTAGGCTCCGAATGCC
>chr5B_713
--------------------------------------------------------------------------------
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---------------------------------------------------------------------------CATGT
TAATTATGAAGAGAATATCATTTCTTTGAACGGGAGGATCATTAATAGCCCTG--GATAGAAGGAATTAATGCACCGATT
CTGTAGGAGATAATTTACTTACCGAACAATCTCACGACCTTAATTTCGTTAAGATAAAAAATAACACTGGTAAGATATTG
CATATCATCTCGGGATCTCTGTATGTATGAGCCGGGAGCTCTATATATAGCTGGCCAAGCTACCCTAATCAATCTTCATC
ACATCAAAGCTTCTCCTGAACTACTCCTACATTA----CAGGGCATGGCGTCCAAGGCCTGCATCCTGGTCCTGCTCTTC
GTTGCAGCTCTTCTCCATACAGGTACGAAAGAACAATGCAATACTTGG--TCGTCGTCGCAGTTTAATCTCAC----CGA
TCCTTGGATCTTAT---GTGCCGTTGATGTGTCCACAGGTCATGCTATTGGCGACGCCGGGCCGTGCCAACTGGAGGACA
TCCGCGTCTCGTCGGTGTTGACGGGGCGGCTGGTCCTGAATGTGCCGGAGTACAGCGTGACGGTGGAGAACACGTGCTCG
TGCCCGCAGGCGGGCGTGGTGATGTACTGCAACCTCGGCGAGGTGAACGCGGT---------------------------
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>chr4D_986
TTCTTAGCT-----------------------------------------------------------------------
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-----------------------------------CTTCAGC-CATGACGTCCAAGGCCTGCATCTTCGTCCTGCTCTTC
GCTGCAGCTCTTCTCCATACAGGTACGCAAGGACAATACAGTATAATACTTCGCCGTCGCAGTTTAGTCACATCGATCGA
TCCTTGGATCTTACGTAGTACCGTTGACGTGTCCGCAGGGCATGCCGGTGGGGACCCCGGGCCGTGCGAGCTGGAGGACA
TCCGCGTGTCGTCGGTGCTGACGGGGCGGCGGGTCCTGAACGTGCCGCAGCACGAGGTGACGGTGGAGAACCTGTGCTCG
TGCCCGCAGAGCGGCGTGGTGATGTCGTGCAACCTCGGCGAGGTGAAGGCGGTGATCCTGGACACGACCAAGATCCGGCT
GCTGAACCGGGAGGAAGGGCTGTGCCTCATCAACAGCGGCTGGCCCATCTTCAACGGCAAGCCC--ATCACCTTCACCTA
CGCCGCCAAGACGCCGCTCGACTTCACCCTCTACAACGCCTCGCCGGAATGCCGGGCGTGA-------------------
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>chr5B_1322
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------------------------------------------------------ATCCCGGACACGACCAAGCTCCGCCT
GCTGAGCCGGAAGCAAGGCCACTGCCTCATCAACAGCGGCTGGCCGATCTTCAACGGCAAGCCCATATAACGTTCACCTA
CGCCGCCAAGACGCAGCTCGACTTCACCCTCGATAACGCCTCGCCGGAGTGCCGGGTGTGATCGTAGCTTTTCTTTACGC
AAACGCACGCAACTTTATTACGTACTTGGAAGTAAGAATGTTTAAAGGTACAGAAATAGGGTCGTAGGAATGACCGGGCC
AAATATGGCGTCCTGTACCTAAAGACGACGTGTCCTTTGCAAGGCTATGCGCCTTGAAATTAAAGTTTGTACGCTCATGA
ATAAAGC-GGCAACTATCAAAAGATGATTTCTACTCGGCAATCTCTC----------TCCATAAGCACTCCGAGATCTCT
ACGTTCCTGAGATTCAGATCTCCGCTGGTGAAAAGCCACACGCTAAGGCCTCGTTTGGTTCATAGGATAGGATTATCATA
GGAATATGAATTTTGTAGGAAATGAGATGACATGTATCTCAAATCCTATGAGCAGGAATAGGAAACGAGATGTCATTTGA
TTGACATCAAAGGAATTTTTTCATTGAGTCTAGGCCCATTTTTATTTTCCTATGAAATGTGGAGGATAGGAACCAATCCT
ATGTAGGAATAGGAATCCATTCCTATGAATCAAAGGGCTCTAAAGGAAAAAATCCTATAAAAATTTTATCCTCTAGAATT
CCTATGAAATTCCTTCAAACCAAAGGAGGCCTAAAGCTTAGCAAGATGGGTCCTGGATATCTTTGGCAACAACTATC-AT
GCACCCACATATGCTTCAGTAATATA------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------ACTGCAAAATATCACAATCGCACATCTTGTGCCCGCTCGGGCAAAGGCCCCATCAACATTTACTTTTGCAT
GATCCAGTTAGGGTGGAAGCCATTTATTGCGAGTCTCATC--TGATTCTAGGCTTTGAAACAATCGCTTCTCCAACGCCT
GTACCTCTGCCAAATATATTTTTATGAATTGATGCATTGAAGATGGACTCTGAAAGATGTTCTCGTGGATGACCTTTCTT
CTAGAAAACCAAATTGCCCAAAGAGAGATGATCATACTTGAGAACTGCCCTTGCAAAAAAGAGCTTTTTTGCATTTGGTT
TGGTACATGCTAGCATGCTTGCAGTCAAGATCGCA---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------
>SNPs
-------------------------------------------------------------------------------S
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------S---------------------------------S-
---------------------------S----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--S-----------------S-S-----S---------SS--------------S------------S--S---------
--------------S-----------S-----------------------------------------------------
-----------------------------S-------------------S-----S-------S---S------------
--------------------S----S-S-----------------------------------S----------------
-------------------S----SS-SSSS---S---------------------------------S--------S--
------------------------------------S----------------------------------------S--
-----------------------------------S--------------------------------------------
--------------------------------------------------------------------------------
---S-------------------------------------------S---------S----------------------
----------------------------------------------------------------------S---------
-------------------------------------------------------------------------S----S-
-------S------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------S-------------------S---------------------------------S---------------
----------------S-------------------------S-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------S------S----S------------------SS--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------S-----------------------S-----S---------------
------S----------------------S-----------------------------------S------S-------
--------------------------------------------------------------------------------
---------------S----------S-------------------------------------S---------------
--------S---------------------------S-------------S------S-------S--------------
--S-----------------------SS----------------------------S---SS------------------
-S---S-SSSSSSSSS----S-------------------------------------------------------SS--
---------------------------------S-------------------------------------------
>forward_663
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---GTGTCATTCTTCGGACGGGT---------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------
>reverse_3426
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------------------------ACTTCTCGAGCGCCT
TACCT---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------
