Multiple sequence alignment - TraesCS5A01G082800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G082800 chr5A 100.000 3448 0 0 1 3448 108282383 108278936 0.000000e+00 6368.0
1 TraesCS5A01G082800 chr5A 94.828 58 3 0 3111 3168 690846481 690846424 1.320000e-14 91.6
2 TraesCS5A01G082800 chr4A 89.574 1880 138 40 904 2741 468207687 468209550 0.000000e+00 2333.0
3 TraesCS5A01G082800 chr4A 90.000 70 7 0 3095 3164 73151166 73151235 1.320000e-14 91.6
4 TraesCS5A01G082800 chr4B 89.541 1788 126 30 902 2649 168565657 168567423 0.000000e+00 2209.0
5 TraesCS5A01G082800 chr4B 82.287 446 75 4 998 1441 583081464 583081021 1.940000e-102 383.0
6 TraesCS5A01G082800 chr4B 89.552 67 7 0 2675 2741 168567426 168567492 6.130000e-13 86.1
7 TraesCS5A01G082800 chr4B 82.796 93 12 4 161 251 89357229 89357319 2.850000e-11 80.5
8 TraesCS5A01G082800 chr5D 92.527 1405 63 18 473 1860 104625075 104626454 0.000000e+00 1975.0
9 TraesCS5A01G082800 chr5D 91.491 1187 55 22 1764 2923 104626395 104627562 0.000000e+00 1591.0
10 TraesCS5A01G082800 chr5D 89.643 280 29 0 3169 3448 564223110 564222831 1.180000e-94 357.0
11 TraesCS5A01G082800 chr5B 93.036 1120 50 9 750 1863 114425259 114426356 0.000000e+00 1611.0
12 TraesCS5A01G082800 chr5B 90.285 1194 89 20 1764 2946 114426294 114427471 0.000000e+00 1537.0
13 TraesCS5A01G082800 chr5B 80.754 504 60 23 1 475 114424587 114425082 3.270000e-95 359.0
14 TraesCS5A01G082800 chr5B 80.055 361 40 19 130 472 25273198 25273544 4.450000e-59 239.0
15 TraesCS5A01G082800 chr4D 92.012 964 69 5 904 1860 108053098 108052136 0.000000e+00 1347.0
16 TraesCS5A01G082800 chr4D 88.004 917 73 20 1767 2649 108052194 108051281 0.000000e+00 1050.0
17 TraesCS5A01G082800 chr4D 88.571 280 32 0 3169 3448 484656223 484655944 1.190000e-89 340.0
18 TraesCS5A01G082800 chr3A 89.247 279 28 2 3169 3447 574258492 574258768 7.080000e-92 348.0
19 TraesCS5A01G082800 chr7A 88.929 280 31 0 3169 3448 444977923 444977644 2.550000e-91 346.0
20 TraesCS5A01G082800 chr2D 88.929 280 31 0 3169 3448 613089360 613089639 2.550000e-91 346.0
21 TraesCS5A01G082800 chr2D 90.411 73 7 0 3095 3167 428570425 428570497 2.830000e-16 97.1
22 TraesCS5A01G082800 chr2A 88.929 280 31 0 3169 3448 584139472 584139751 2.550000e-91 346.0
23 TraesCS5A01G082800 chr2A 81.404 285 39 7 91 363 753938165 753937883 1.610000e-53 220.0
24 TraesCS5A01G082800 chr1D 88.929 280 31 0 3169 3448 476807317 476807596 2.550000e-91 346.0
25 TraesCS5A01G082800 chr1D 90.196 51 4 1 3095 3145 443714425 443714376 7.990000e-07 65.8
26 TraesCS5A01G082800 chr7D 88.571 280 32 0 3169 3448 164483256 164483535 1.190000e-89 340.0
27 TraesCS5A01G082800 chr6D 88.571 280 32 0 3169 3448 418784951 418785230 1.190000e-89 340.0
28 TraesCS5A01G082800 chr6D 82.262 389 43 15 90 452 412832239 412832627 2.580000e-81 313.0
29 TraesCS5A01G082800 chr3D 82.410 307 48 5 164 468 26617748 26618050 2.640000e-66 263.0
30 TraesCS5A01G082800 chr3D 94.521 73 3 1 3095 3167 103675269 103675198 1.010000e-20 111.0
31 TraesCS5A01G082800 chrUn 81.470 313 49 6 164 471 38777044 38776736 7.390000e-62 248.0
32 TraesCS5A01G082800 chr3B 90.411 73 3 3 3095 3164 215008465 215008536 3.660000e-15 93.5
33 TraesCS5A01G082800 chr1A 90.000 70 7 0 3099 3168 110754324 110754393 1.320000e-14 91.6
34 TraesCS5A01G082800 chr6A 90.000 70 6 1 3099 3168 6016698 6016766 4.740000e-14 89.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G082800 chr5A 108278936 108282383 3447 True 6368.00 6368 100.0000 1 3448 1 chr5A.!!$R1 3447
1 TraesCS5A01G082800 chr4A 468207687 468209550 1863 False 2333.00 2333 89.5740 904 2741 1 chr4A.!!$F2 1837
2 TraesCS5A01G082800 chr4B 168565657 168567492 1835 False 1147.55 2209 89.5465 902 2741 2 chr4B.!!$F2 1839
3 TraesCS5A01G082800 chr5D 104625075 104627562 2487 False 1783.00 1975 92.0090 473 2923 2 chr5D.!!$F1 2450
4 TraesCS5A01G082800 chr5B 114424587 114427471 2884 False 1169.00 1611 88.0250 1 2946 3 chr5B.!!$F2 2945
5 TraesCS5A01G082800 chr4D 108051281 108053098 1817 True 1198.50 1347 90.0080 904 2649 2 chr4D.!!$R2 1745

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
516 545 0.036388 TGCCTTCTCCATTGGTCGAC 60.036 55.000 7.13 7.13 0.00 4.20 F
796 839 1.000607 ACGCTATGTCACTGACGTTGT 60.001 47.619 9.20 4.01 34.95 3.32 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1448 1495 0.494095 AGAGGGGTGAGAGGAAAGGT 59.506 55.000 0.0 0.0 0.0 3.50 R
2512 2671 3.312421 CCGAGCAAAAACGACATCCATAT 59.688 43.478 0.0 0.0 0.0 1.78 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 4.393990 TGACATGTGCTGTGAAGAATGATC 59.606 41.667 1.15 0.00 38.54 2.92
25 26 4.329392 ACATGTGCTGTGAAGAATGATCA 58.671 39.130 0.00 0.00 36.48 2.92
99 100 9.639601 AAGAAAGAAAGAAAATCGAAAGTGTTT 57.360 25.926 0.00 0.00 0.00 2.83
135 143 5.416952 AGCTTAAATGAACTGGGATGAACAG 59.583 40.000 0.00 0.00 41.64 3.16
146 154 7.595819 ACTGGGATGAACAGTAAAATCAAAA 57.404 32.000 0.00 0.00 46.62 2.44
186 203 9.945904 TTCTTTTTGTGGTAACCTTTAACAAAT 57.054 25.926 0.00 0.00 39.65 2.32
187 204 9.372369 TCTTTTTGTGGTAACCTTTAACAAATG 57.628 29.630 0.00 0.00 39.65 2.32
188 205 9.157104 CTTTTTGTGGTAACCTTTAACAAATGT 57.843 29.630 0.00 0.00 39.65 2.71
332 352 1.522668 TGCCACGACTTCCAGAAATG 58.477 50.000 0.00 0.00 0.00 2.32
380 400 6.003950 AGCACATAGTACATTTGTCAAAGGT 58.996 36.000 18.59 18.59 39.02 3.50
383 403 7.749126 GCACATAGTACATTTGTCAAAGGTTAC 59.251 37.037 19.63 14.71 36.68 2.50
384 404 8.779303 CACATAGTACATTTGTCAAAGGTTACA 58.221 33.333 19.63 6.77 36.68 2.41
433 462 6.635030 ATCTTTCCTGGTTTTACTGTTCAC 57.365 37.500 0.00 0.00 0.00 3.18
434 463 5.502079 TCTTTCCTGGTTTTACTGTTCACA 58.498 37.500 0.00 0.00 0.00 3.58
436 465 6.434652 TCTTTCCTGGTTTTACTGTTCACAAA 59.565 34.615 0.00 0.00 0.00 2.83
447 476 7.754069 TTACTGTTCACAAAAAGCATTTGAG 57.246 32.000 18.40 12.22 39.02 3.02
452 481 3.066621 TCACAAAAAGCATTTGAGCTCGT 59.933 39.130 18.40 0.00 45.89 4.18
461 490 3.311106 CATTTGAGCTCGTGTGCAAATT 58.689 40.909 9.64 0.00 38.49 1.82
466 495 2.221169 AGCTCGTGTGCAAATTCTTCA 58.779 42.857 0.00 0.00 34.99 3.02
469 498 2.383298 CGTGTGCAAATTCTTCACGT 57.617 45.000 13.68 0.00 44.07 4.49
470 499 2.298300 CGTGTGCAAATTCTTCACGTC 58.702 47.619 13.68 4.62 44.07 4.34
471 500 2.650608 GTGTGCAAATTCTTCACGTCC 58.349 47.619 0.00 0.00 33.69 4.79
472 501 2.032799 GTGTGCAAATTCTTCACGTCCA 59.967 45.455 0.00 0.00 33.69 4.02
473 502 2.685388 TGTGCAAATTCTTCACGTCCAA 59.315 40.909 0.00 0.00 33.69 3.53
474 503 3.129462 TGTGCAAATTCTTCACGTCCAAA 59.871 39.130 0.00 0.00 33.69 3.28
475 504 3.730715 GTGCAAATTCTTCACGTCCAAAG 59.269 43.478 0.00 0.00 0.00 2.77
476 505 3.629855 TGCAAATTCTTCACGTCCAAAGA 59.370 39.130 0.00 0.00 0.00 2.52
477 506 4.097135 TGCAAATTCTTCACGTCCAAAGAA 59.903 37.500 15.66 15.66 43.52 2.52
493 522 8.690840 CGTCCAAAGAAAATTATGTTCTTCAAC 58.309 33.333 10.46 8.36 43.00 3.18
516 545 0.036388 TGCCTTCTCCATTGGTCGAC 60.036 55.000 7.13 7.13 0.00 4.20
553 585 2.904866 ACAAAAAGGCGCGCTCCA 60.905 55.556 32.29 0.00 0.00 3.86
586 629 2.738321 GCTCCCAACACCACAACTTTTG 60.738 50.000 0.00 0.00 0.00 2.44
587 630 2.495669 CTCCCAACACCACAACTTTTGT 59.504 45.455 0.00 0.00 46.75 2.83
610 653 3.320610 TTTTGAGAATCCCCAACACCA 57.679 42.857 0.00 0.00 0.00 4.17
611 654 2.286365 TTGAGAATCCCCAACACCAC 57.714 50.000 0.00 0.00 0.00 4.16
612 655 1.144691 TGAGAATCCCCAACACCACA 58.855 50.000 0.00 0.00 0.00 4.17
613 656 1.496857 TGAGAATCCCCAACACCACAA 59.503 47.619 0.00 0.00 0.00 3.33
614 657 1.886542 GAGAATCCCCAACACCACAAC 59.113 52.381 0.00 0.00 0.00 3.32
615 658 1.499007 AGAATCCCCAACACCACAACT 59.501 47.619 0.00 0.00 0.00 3.16
616 659 2.091333 AGAATCCCCAACACCACAACTT 60.091 45.455 0.00 0.00 0.00 2.66
695 738 1.642762 AGCCCATTTCTCATTCCCACT 59.357 47.619 0.00 0.00 0.00 4.00
696 739 2.852449 AGCCCATTTCTCATTCCCACTA 59.148 45.455 0.00 0.00 0.00 2.74
697 740 3.117738 AGCCCATTTCTCATTCCCACTAG 60.118 47.826 0.00 0.00 0.00 2.57
698 741 3.372025 GCCCATTTCTCATTCCCACTAGT 60.372 47.826 0.00 0.00 0.00 2.57
699 742 4.455606 CCCATTTCTCATTCCCACTAGTC 58.544 47.826 0.00 0.00 0.00 2.59
700 743 4.455606 CCATTTCTCATTCCCACTAGTCC 58.544 47.826 0.00 0.00 0.00 3.85
701 744 4.080356 CCATTTCTCATTCCCACTAGTCCA 60.080 45.833 0.00 0.00 0.00 4.02
702 745 4.553330 TTTCTCATTCCCACTAGTCCAC 57.447 45.455 0.00 0.00 0.00 4.02
724 767 1.253100 CACTAACAAACCGGCCCATT 58.747 50.000 0.00 0.00 0.00 3.16
757 800 1.550976 ACTCCTCATTTCGTCAGTCCC 59.449 52.381 0.00 0.00 0.00 4.46
796 839 1.000607 ACGCTATGTCACTGACGTTGT 60.001 47.619 9.20 4.01 34.95 3.32
831 874 1.154301 CAAACGAATCCAACGGCCG 60.154 57.895 26.86 26.86 34.93 6.13
928 972 1.211456 ATTGCTCCCTCTTCCTCCTG 58.789 55.000 0.00 0.00 0.00 3.86
1296 1343 3.637273 GCCACCCTCTCCGTTGGT 61.637 66.667 0.00 0.00 0.00 3.67
1422 1469 1.003355 CGTCATCAGCCACAACCCT 60.003 57.895 0.00 0.00 0.00 4.34
1448 1495 3.345582 ACGGCACCTCAAGGTACTGTTA 61.346 50.000 7.91 0.00 46.27 2.41
1468 1515 1.722851 ACCTTTCCTCTCACCCCTCTA 59.277 52.381 0.00 0.00 0.00 2.43
1484 1535 5.839606 ACCCCTCTATCTAAAGTACATGACC 59.160 44.000 0.00 0.00 0.00 4.02
1494 1545 7.782049 TCTAAAGTACATGACCATGGTTAGAG 58.218 38.462 20.85 14.05 42.91 2.43
1509 1560 1.464734 TAGAGCTGACGTTCTCCTGG 58.535 55.000 0.00 0.00 32.60 4.45
1530 1581 7.453752 TCCTGGTAGTAACTGTCACTAGATTTT 59.546 37.037 0.00 0.00 0.00 1.82
1605 1656 7.222805 TGAATATATGTTCGTTCACTGCTTCTC 59.777 37.037 7.59 0.00 0.00 2.87
1609 1662 2.084610 TCGTTCACTGCTTCTCATGG 57.915 50.000 0.00 0.00 0.00 3.66
1672 1725 5.745294 CCTTAAATGTGTGTGCTTCATATGC 59.255 40.000 0.00 0.00 0.00 3.14
1757 1810 6.988580 TCTCCTGTTCATTGTATAATCTGCAG 59.011 38.462 7.63 7.63 0.00 4.41
1765 1818 6.483307 TCATTGTATAATCTGCAGCTGTTACC 59.517 38.462 16.64 0.00 0.00 2.85
1786 1876 5.500234 ACCATATGCTTGCTCTTCTGTTAA 58.500 37.500 0.00 0.00 0.00 2.01
1794 1884 5.877564 GCTTGCTCTTCTGTTAACCTAGAAT 59.122 40.000 8.39 0.00 32.92 2.40
1821 1911 9.836864 TGTACATGATATGCTTTCTTCTGTTAT 57.163 29.630 0.00 0.00 0.00 1.89
1823 1913 8.388484 ACATGATATGCTTTCTTCTGTTATCC 57.612 34.615 0.00 0.00 0.00 2.59
1833 1923 7.255277 GCTTTCTTCTGTTATCCTTGAACTTGT 60.255 37.037 0.00 0.00 0.00 3.16
1839 1929 7.397221 TCTGTTATCCTTGAACTTGTCATGAT 58.603 34.615 0.00 0.00 35.70 2.45
1847 1937 7.828717 TCCTTGAACTTGTCATGATATGCTTTA 59.171 33.333 0.00 0.00 35.70 1.85
1971 2106 7.780008 TTACATATACGTGGACCATTTCTTG 57.220 36.000 0.00 0.00 0.00 3.02
1981 2116 6.747280 CGTGGACCATTTCTTGTTATCATTTC 59.253 38.462 0.00 0.00 0.00 2.17
1993 2128 6.961359 TGTTATCATTTCCTTGTCAGTACG 57.039 37.500 0.00 0.00 0.00 3.67
2031 2190 3.448093 TTGGTTATGTTGCCTGATGGA 57.552 42.857 0.00 0.00 34.57 3.41
2055 2214 7.362747 GGACTGATGCTTTTGATGAATTCTTCT 60.363 37.037 18.92 0.95 0.00 2.85
2512 2671 2.746904 CCGTCAAGGACATGTATTGCAA 59.253 45.455 15.29 0.00 45.00 4.08
2591 2750 1.078759 GCTGTCGTGGTCTGGATTCG 61.079 60.000 0.00 0.00 0.00 3.34
2613 2772 4.032900 CGTCGGTCCACATAAAGAAGATTG 59.967 45.833 0.00 0.00 0.00 2.67
2706 2868 7.334421 TGTTTTAGTTTAGCTCTATTGCTGGAG 59.666 37.037 0.00 0.00 43.87 3.86
2743 2905 2.992124 TTTGGTCGAGTCAAACAGGA 57.008 45.000 9.10 0.00 0.00 3.86
2744 2906 2.526304 TTGGTCGAGTCAAACAGGAG 57.474 50.000 0.00 0.00 0.00 3.69
2785 2954 4.986034 CGTGGTTCTTTGGAATTTTAACCC 59.014 41.667 0.00 0.00 36.39 4.11
2786 2955 5.452077 CGTGGTTCTTTGGAATTTTAACCCA 60.452 40.000 0.00 0.00 36.39 4.51
2788 2957 6.995686 GTGGTTCTTTGGAATTTTAACCCAAT 59.004 34.615 0.00 0.00 39.43 3.16
2789 2958 6.995091 TGGTTCTTTGGAATTTTAACCCAATG 59.005 34.615 0.00 0.00 39.43 2.82
2791 2960 6.429692 GTTCTTTGGAATTTTAACCCAATGGG 59.570 38.462 18.46 18.46 39.43 4.00
2792 2961 7.907445 GTTCTTTGGAATTTTAACCCAATGGGT 60.907 37.037 20.19 20.19 45.21 4.51
2807 2994 7.664552 CCCAATGGGTGATGCATATATAAAT 57.335 36.000 10.91 0.00 38.25 1.40
2849 3036 0.251165 ACCCAAAATCACCCGTCCAG 60.251 55.000 0.00 0.00 0.00 3.86
2932 3119 0.460284 CGAACGCCAACTGCCTCTAT 60.460 55.000 0.00 0.00 36.24 1.98
2946 3133 6.307776 ACTGCCTCTATGTACTTAGAGCATA 58.692 40.000 28.31 19.08 42.54 3.14
2947 3134 6.432783 ACTGCCTCTATGTACTTAGAGCATAG 59.567 42.308 28.31 25.28 42.54 2.23
2948 3135 6.307776 TGCCTCTATGTACTTAGAGCATAGT 58.692 40.000 28.31 0.00 42.54 2.12
2949 3136 6.207614 TGCCTCTATGTACTTAGAGCATAGTG 59.792 42.308 28.31 19.11 42.54 2.74
2950 3137 6.207810 GCCTCTATGTACTTAGAGCATAGTGT 59.792 42.308 28.31 0.00 42.54 3.55
2951 3138 7.390996 GCCTCTATGTACTTAGAGCATAGTGTA 59.609 40.741 28.31 4.19 42.54 2.90
2952 3139 9.286170 CCTCTATGTACTTAGAGCATAGTGTAA 57.714 37.037 28.31 3.79 42.54 2.41
2967 3154 9.643693 AGCATAGTGTAAATTTGAAAATTCAGG 57.356 29.630 0.00 0.00 37.62 3.86
2968 3155 8.872845 GCATAGTGTAAATTTGAAAATTCAGGG 58.127 33.333 0.00 0.00 37.62 4.45
2969 3156 9.927668 CATAGTGTAAATTTGAAAATTCAGGGT 57.072 29.630 0.00 0.00 37.62 4.34
2970 3157 9.927668 ATAGTGTAAATTTGAAAATTCAGGGTG 57.072 29.630 0.00 0.00 37.62 4.61
2971 3158 7.216494 AGTGTAAATTTGAAAATTCAGGGTGG 58.784 34.615 0.00 0.00 37.62 4.61
2972 3159 6.426633 GTGTAAATTTGAAAATTCAGGGTGGG 59.573 38.462 0.00 0.00 37.62 4.61
2973 3160 3.701205 ATTTGAAAATTCAGGGTGGGC 57.299 42.857 0.00 0.00 38.61 5.36
2974 3161 1.347062 TTGAAAATTCAGGGTGGGCC 58.653 50.000 0.00 0.00 38.61 5.80
2975 3162 0.897863 TGAAAATTCAGGGTGGGCCG 60.898 55.000 0.00 0.00 31.21 6.13
2976 3163 0.610785 GAAAATTCAGGGTGGGCCGA 60.611 55.000 0.00 0.00 34.97 5.54
2977 3164 0.041090 AAAATTCAGGGTGGGCCGAT 59.959 50.000 0.00 0.00 34.97 4.18
2978 3165 0.395724 AAATTCAGGGTGGGCCGATC 60.396 55.000 0.00 0.00 34.97 3.69
2979 3166 2.608970 AATTCAGGGTGGGCCGATCG 62.609 60.000 8.51 8.51 34.97 3.69
2984 3171 4.851179 GGTGGGCCGATCGGGTTC 62.851 72.222 33.98 18.20 38.44 3.62
2985 3172 4.851179 GTGGGCCGATCGGGTTCC 62.851 72.222 33.98 25.56 38.44 3.62
2987 3174 2.841044 GGGCCGATCGGGTTCCTA 60.841 66.667 33.98 0.00 38.44 2.94
2988 3175 2.735237 GGCCGATCGGGTTCCTAG 59.265 66.667 33.98 7.82 38.44 3.02
2989 3176 2.735237 GCCGATCGGGTTCCTAGG 59.265 66.667 33.98 0.82 38.44 3.02
2990 3177 2.735237 CCGATCGGGTTCCTAGGC 59.265 66.667 26.95 0.00 0.00 3.93
2991 3178 2.335369 CGATCGGGTTCCTAGGCG 59.665 66.667 7.38 1.51 0.00 5.52
2992 3179 2.487532 CGATCGGGTTCCTAGGCGT 61.488 63.158 7.38 0.00 0.00 5.68
2993 3180 1.363080 GATCGGGTTCCTAGGCGTC 59.637 63.158 2.96 0.00 0.00 5.19
2994 3181 2.403671 GATCGGGTTCCTAGGCGTCG 62.404 65.000 2.96 5.64 0.00 5.12
2995 3182 2.898920 ATCGGGTTCCTAGGCGTCGA 62.899 60.000 2.96 10.93 0.00 4.20
2996 3183 2.487532 CGGGTTCCTAGGCGTCGAT 61.488 63.158 2.96 0.00 0.00 3.59
2997 3184 1.821258 GGGTTCCTAGGCGTCGATT 59.179 57.895 2.96 0.00 0.00 3.34
2998 3185 0.177373 GGGTTCCTAGGCGTCGATTT 59.823 55.000 2.96 0.00 0.00 2.17
2999 3186 1.568606 GGTTCCTAGGCGTCGATTTC 58.431 55.000 2.96 0.00 0.00 2.17
3000 3187 1.197910 GTTCCTAGGCGTCGATTTCG 58.802 55.000 2.96 0.00 41.45 3.46
3001 3188 0.101759 TTCCTAGGCGTCGATTTCGG 59.898 55.000 2.96 0.00 40.29 4.30
3002 3189 1.033746 TCCTAGGCGTCGATTTCGGT 61.034 55.000 2.96 0.00 40.29 4.69
3003 3190 0.179119 CCTAGGCGTCGATTTCGGTT 60.179 55.000 0.00 0.00 40.29 4.44
3004 3191 1.197910 CTAGGCGTCGATTTCGGTTC 58.802 55.000 0.00 0.00 40.29 3.62
3005 3192 0.813184 TAGGCGTCGATTTCGGTTCT 59.187 50.000 0.00 0.00 40.29 3.01
3006 3193 0.037605 AGGCGTCGATTTCGGTTCTT 60.038 50.000 0.00 0.00 40.29 2.52
3007 3194 0.794473 GGCGTCGATTTCGGTTCTTT 59.206 50.000 0.00 0.00 40.29 2.52
3008 3195 1.201888 GGCGTCGATTTCGGTTCTTTC 60.202 52.381 0.00 0.00 40.29 2.62
3009 3196 1.524391 GCGTCGATTTCGGTTCTTTCG 60.524 52.381 0.00 0.00 40.29 3.46
3010 3197 1.058695 CGTCGATTTCGGTTCTTTCGG 59.941 52.381 0.00 0.00 40.29 4.30
3011 3198 1.073177 TCGATTTCGGTTCTTTCGGC 58.927 50.000 0.00 0.00 40.29 5.54
3012 3199 0.247145 CGATTTCGGTTCTTTCGGCG 60.247 55.000 0.00 0.00 35.37 6.46
3013 3200 0.520619 GATTTCGGTTCTTTCGGCGC 60.521 55.000 0.00 0.00 0.00 6.53
3014 3201 1.231958 ATTTCGGTTCTTTCGGCGCA 61.232 50.000 10.83 0.00 0.00 6.09
3015 3202 1.437772 TTTCGGTTCTTTCGGCGCAA 61.438 50.000 10.83 0.00 0.00 4.85
3016 3203 1.437772 TTCGGTTCTTTCGGCGCAAA 61.438 50.000 10.83 0.33 0.00 3.68
3017 3204 1.724581 CGGTTCTTTCGGCGCAAAC 60.725 57.895 10.83 3.52 0.00 2.93
3018 3205 1.652563 GGTTCTTTCGGCGCAAACT 59.347 52.632 10.83 0.00 0.00 2.66
3019 3206 0.660300 GGTTCTTTCGGCGCAAACTG 60.660 55.000 10.83 0.00 0.00 3.16
3020 3207 0.660300 GTTCTTTCGGCGCAAACTGG 60.660 55.000 10.83 0.00 0.00 4.00
3021 3208 2.400896 TTCTTTCGGCGCAAACTGGC 62.401 55.000 10.83 0.00 0.00 4.85
3022 3209 3.896863 CTTTCGGCGCAAACTGGCC 62.897 63.158 10.83 0.00 45.95 5.36
3026 3213 3.694538 GGCGCAAACTGGCCCATT 61.695 61.111 10.83 0.00 43.64 3.16
3027 3214 2.343387 GCGCAAACTGGCCCATTT 59.657 55.556 0.30 0.00 0.00 2.32
3028 3215 1.301637 GCGCAAACTGGCCCATTTT 60.302 52.632 0.30 0.00 0.00 1.82
3029 3216 0.884259 GCGCAAACTGGCCCATTTTT 60.884 50.000 0.30 0.00 0.00 1.94
3048 3235 5.557891 TTTTTAACCAGTTTCGGTCGAAA 57.442 34.783 13.59 13.59 38.76 3.46
3049 3236 5.754543 TTTTAACCAGTTTCGGTCGAAAT 57.245 34.783 19.25 7.71 44.52 2.17
3050 3237 5.754543 TTTAACCAGTTTCGGTCGAAATT 57.245 34.783 19.25 13.56 44.52 1.82
3051 3238 3.619233 AACCAGTTTCGGTCGAAATTG 57.381 42.857 24.47 24.47 45.35 2.32
3062 3249 3.216147 GTCGAAATTGACCCACCATTG 57.784 47.619 0.00 0.00 32.61 2.82
3063 3250 2.094752 GTCGAAATTGACCCACCATTGG 60.095 50.000 0.00 0.00 43.50 3.16
3064 3251 1.404047 CGAAATTGACCCACCATTGGC 60.404 52.381 1.54 0.00 42.35 4.52
3065 3252 0.607620 AAATTGACCCACCATTGGCG 59.392 50.000 1.54 0.00 42.35 5.69
3066 3253 0.541764 AATTGACCCACCATTGGCGT 60.542 50.000 1.54 0.00 42.35 5.68
3067 3254 0.541764 ATTGACCCACCATTGGCGTT 60.542 50.000 1.54 0.00 42.35 4.84
3068 3255 1.459455 TTGACCCACCATTGGCGTTG 61.459 55.000 1.54 0.00 42.35 4.10
3069 3256 1.602323 GACCCACCATTGGCGTTGA 60.602 57.895 1.54 0.00 42.35 3.18
3070 3257 0.965363 GACCCACCATTGGCGTTGAT 60.965 55.000 1.54 0.00 42.35 2.57
3071 3258 0.541764 ACCCACCATTGGCGTTGATT 60.542 50.000 1.54 0.00 42.35 2.57
3072 3259 0.108709 CCCACCATTGGCGTTGATTG 60.109 55.000 1.54 0.00 42.35 2.67
3073 3260 0.887247 CCACCATTGGCGTTGATTGA 59.113 50.000 1.54 0.00 35.56 2.57
3074 3261 1.477700 CCACCATTGGCGTTGATTGAT 59.522 47.619 1.54 0.00 35.56 2.57
3075 3262 2.687425 CCACCATTGGCGTTGATTGATA 59.313 45.455 1.54 0.00 35.56 2.15
3076 3263 3.130164 CCACCATTGGCGTTGATTGATAA 59.870 43.478 1.54 0.00 35.56 1.75
3077 3264 4.381398 CCACCATTGGCGTTGATTGATAAA 60.381 41.667 1.54 0.00 35.56 1.40
3078 3265 5.350633 CACCATTGGCGTTGATTGATAAAT 58.649 37.500 1.54 0.00 0.00 1.40
3079 3266 5.811613 CACCATTGGCGTTGATTGATAAATT 59.188 36.000 1.54 0.00 0.00 1.82
3080 3267 6.313411 CACCATTGGCGTTGATTGATAAATTT 59.687 34.615 1.54 0.00 0.00 1.82
3081 3268 6.878389 ACCATTGGCGTTGATTGATAAATTTT 59.122 30.769 1.54 0.00 0.00 1.82
3082 3269 7.148440 ACCATTGGCGTTGATTGATAAATTTTG 60.148 33.333 1.54 0.00 0.00 2.44
3083 3270 6.718454 TTGGCGTTGATTGATAAATTTTGG 57.282 33.333 0.00 0.00 0.00 3.28
3084 3271 4.629200 TGGCGTTGATTGATAAATTTTGGC 59.371 37.500 0.00 0.00 0.00 4.52
3085 3272 4.033932 GGCGTTGATTGATAAATTTTGGCC 59.966 41.667 0.00 0.00 0.00 5.36
3086 3273 4.033932 GCGTTGATTGATAAATTTTGGCCC 59.966 41.667 0.00 0.00 0.00 5.80
3087 3274 5.174395 CGTTGATTGATAAATTTTGGCCCA 58.826 37.500 0.00 0.00 0.00 5.36
3088 3275 5.816777 CGTTGATTGATAAATTTTGGCCCAT 59.183 36.000 0.00 0.00 0.00 4.00
3089 3276 6.983307 CGTTGATTGATAAATTTTGGCCCATA 59.017 34.615 0.00 0.00 0.00 2.74
3090 3277 7.169645 CGTTGATTGATAAATTTTGGCCCATAG 59.830 37.037 0.00 0.00 0.00 2.23
3091 3278 7.673641 TGATTGATAAATTTTGGCCCATAGT 57.326 32.000 0.00 0.00 0.00 2.12
3092 3279 7.499292 TGATTGATAAATTTTGGCCCATAGTG 58.501 34.615 0.00 0.00 0.00 2.74
3093 3280 6.865834 TTGATAAATTTTGGCCCATAGTGT 57.134 33.333 0.00 0.00 0.00 3.55
3094 3281 7.962995 TTGATAAATTTTGGCCCATAGTGTA 57.037 32.000 0.00 0.00 0.00 2.90
3095 3282 7.962995 TGATAAATTTTGGCCCATAGTGTAA 57.037 32.000 0.00 0.00 0.00 2.41
3096 3283 8.367660 TGATAAATTTTGGCCCATAGTGTAAA 57.632 30.769 0.00 0.00 0.00 2.01
3097 3284 8.986991 TGATAAATTTTGGCCCATAGTGTAAAT 58.013 29.630 0.00 0.00 0.00 1.40
3098 3285 9.830975 GATAAATTTTGGCCCATAGTGTAAATT 57.169 29.630 0.00 0.00 0.00 1.82
3099 3286 9.830975 ATAAATTTTGGCCCATAGTGTAAATTC 57.169 29.630 0.00 0.00 0.00 2.17
3100 3287 6.865834 ATTTTGGCCCATAGTGTAAATTCA 57.134 33.333 0.00 0.00 0.00 2.57
3101 3288 6.672266 TTTTGGCCCATAGTGTAAATTCAA 57.328 33.333 0.00 0.00 0.00 2.69
3102 3289 5.652994 TTGGCCCATAGTGTAAATTCAAC 57.347 39.130 0.00 0.00 0.00 3.18
3103 3290 4.667573 TGGCCCATAGTGTAAATTCAACA 58.332 39.130 0.00 0.00 0.00 3.33
3104 3291 5.268387 TGGCCCATAGTGTAAATTCAACAT 58.732 37.500 0.00 0.00 0.00 2.71
3105 3292 6.427441 TGGCCCATAGTGTAAATTCAACATA 58.573 36.000 0.00 0.00 0.00 2.29
3106 3293 6.892456 TGGCCCATAGTGTAAATTCAACATAA 59.108 34.615 0.00 0.00 0.00 1.90
3107 3294 7.068103 TGGCCCATAGTGTAAATTCAACATAAG 59.932 37.037 0.00 0.00 0.00 1.73
3108 3295 6.918022 GCCCATAGTGTAAATTCAACATAAGC 59.082 38.462 0.00 0.00 0.00 3.09
3109 3296 7.201821 GCCCATAGTGTAAATTCAACATAAGCT 60.202 37.037 0.00 0.00 0.00 3.74
3110 3297 9.337396 CCCATAGTGTAAATTCAACATAAGCTA 57.663 33.333 0.00 0.00 0.00 3.32
3182 3369 0.663153 ACAAAGCGTTGTCCTTGAGC 59.337 50.000 12.50 0.00 45.00 4.26
3183 3370 0.040067 CAAAGCGTTGTCCTTGAGCC 60.040 55.000 4.01 0.00 0.00 4.70
3184 3371 0.179018 AAAGCGTTGTCCTTGAGCCT 60.179 50.000 0.00 0.00 0.00 4.58
3185 3372 0.179018 AAGCGTTGTCCTTGAGCCTT 60.179 50.000 0.00 0.00 0.00 4.35
3186 3373 0.603975 AGCGTTGTCCTTGAGCCTTC 60.604 55.000 0.00 0.00 0.00 3.46
3187 3374 1.901650 GCGTTGTCCTTGAGCCTTCG 61.902 60.000 0.00 0.00 0.00 3.79
3188 3375 0.600255 CGTTGTCCTTGAGCCTTCGT 60.600 55.000 0.00 0.00 0.00 3.85
3189 3376 1.336517 CGTTGTCCTTGAGCCTTCGTA 60.337 52.381 0.00 0.00 0.00 3.43
3190 3377 2.338500 GTTGTCCTTGAGCCTTCGTAG 58.662 52.381 0.00 0.00 0.00 3.51
3191 3378 1.919240 TGTCCTTGAGCCTTCGTAGA 58.081 50.000 0.00 0.00 0.00 2.59
3192 3379 1.544691 TGTCCTTGAGCCTTCGTAGAC 59.455 52.381 0.00 0.00 34.32 2.59
3193 3380 0.809385 TCCTTGAGCCTTCGTAGACG 59.191 55.000 0.00 0.00 34.32 4.18
3194 3381 0.802607 CCTTGAGCCTTCGTAGACGC 60.803 60.000 0.00 0.00 39.60 5.19
3195 3382 0.171455 CTTGAGCCTTCGTAGACGCT 59.829 55.000 0.00 0.00 43.97 5.07
3196 3383 1.400846 CTTGAGCCTTCGTAGACGCTA 59.599 52.381 0.00 0.00 41.74 4.26
3197 3384 0.731417 TGAGCCTTCGTAGACGCTAC 59.269 55.000 0.00 6.87 41.74 3.58
3198 3385 0.731417 GAGCCTTCGTAGACGCTACA 59.269 55.000 14.49 2.99 41.74 2.74
3199 3386 0.450983 AGCCTTCGTAGACGCTACAC 59.549 55.000 14.49 2.38 40.15 2.90
3200 3387 0.525029 GCCTTCGTAGACGCTACACC 60.525 60.000 14.49 0.00 39.60 4.16
3201 3388 0.806868 CCTTCGTAGACGCTACACCA 59.193 55.000 14.49 0.00 39.60 4.17
3202 3389 1.202154 CCTTCGTAGACGCTACACCAG 60.202 57.143 14.49 8.14 39.60 4.00
3203 3390 1.736126 CTTCGTAGACGCTACACCAGA 59.264 52.381 14.49 4.08 39.60 3.86
3204 3391 2.034104 TCGTAGACGCTACACCAGAT 57.966 50.000 14.49 0.00 39.60 2.90
3205 3392 1.938577 TCGTAGACGCTACACCAGATC 59.061 52.381 14.49 0.00 39.60 2.75
3206 3393 1.002684 CGTAGACGCTACACCAGATCC 60.003 57.143 14.49 0.00 0.00 3.36
3207 3394 2.299521 GTAGACGCTACACCAGATCCT 58.700 52.381 10.79 0.00 0.00 3.24
3208 3395 1.107114 AGACGCTACACCAGATCCTG 58.893 55.000 0.00 0.00 0.00 3.86
3209 3396 0.528684 GACGCTACACCAGATCCTGC 60.529 60.000 0.00 0.00 0.00 4.85
3210 3397 0.972983 ACGCTACACCAGATCCTGCT 60.973 55.000 0.00 0.00 0.00 4.24
3211 3398 0.529337 CGCTACACCAGATCCTGCTG 60.529 60.000 0.00 0.00 35.66 4.41
3212 3399 0.813210 GCTACACCAGATCCTGCTGC 60.813 60.000 0.00 0.00 34.56 5.25
3213 3400 0.538584 CTACACCAGATCCTGCTGCA 59.461 55.000 0.88 0.88 34.56 4.41
3214 3401 0.538584 TACACCAGATCCTGCTGCAG 59.461 55.000 22.44 22.44 34.56 4.41
3215 3402 1.298993 CACCAGATCCTGCTGCAGT 59.701 57.895 26.41 10.66 34.56 4.40
3216 3403 0.322277 CACCAGATCCTGCTGCAGTT 60.322 55.000 26.41 14.63 34.56 3.16
3217 3404 0.322277 ACCAGATCCTGCTGCAGTTG 60.322 55.000 26.41 17.84 34.56 3.16
3218 3405 0.322277 CCAGATCCTGCTGCAGTTGT 60.322 55.000 26.41 12.84 34.56 3.32
3219 3406 1.531423 CAGATCCTGCTGCAGTTGTT 58.469 50.000 26.41 8.78 0.00 2.83
3220 3407 1.199327 CAGATCCTGCTGCAGTTGTTG 59.801 52.381 26.41 15.68 0.00 3.33
3221 3408 1.072806 AGATCCTGCTGCAGTTGTTGA 59.927 47.619 26.41 16.78 0.00 3.18
3222 3409 2.089980 GATCCTGCTGCAGTTGTTGAT 58.910 47.619 26.41 20.34 0.00 2.57
3223 3410 1.241165 TCCTGCTGCAGTTGTTGATG 58.759 50.000 26.41 10.01 0.00 3.07
3224 3411 0.388134 CCTGCTGCAGTTGTTGATGC 60.388 55.000 26.41 0.00 42.86 3.91
3226 3413 0.031043 TGCTGCAGTTGTTGATGCAC 59.969 50.000 16.64 0.00 46.97 4.57
3227 3414 0.665369 GCTGCAGTTGTTGATGCACC 60.665 55.000 16.64 0.00 46.97 5.01
3228 3415 0.956633 CTGCAGTTGTTGATGCACCT 59.043 50.000 5.25 0.00 46.97 4.00
3229 3416 2.153645 CTGCAGTTGTTGATGCACCTA 58.846 47.619 5.25 0.00 46.97 3.08
3230 3417 2.751259 CTGCAGTTGTTGATGCACCTAT 59.249 45.455 5.25 0.00 46.97 2.57
3231 3418 3.940852 CTGCAGTTGTTGATGCACCTATA 59.059 43.478 5.25 0.00 46.97 1.31
3232 3419 3.940852 TGCAGTTGTTGATGCACCTATAG 59.059 43.478 0.00 0.00 46.97 1.31
3233 3420 3.313526 GCAGTTGTTGATGCACCTATAGG 59.686 47.826 17.73 17.73 42.11 2.57
3249 3436 6.597832 CCTATAGGTTTCGAATCTCCTGAT 57.402 41.667 20.08 13.96 33.70 2.90
3250 3437 6.393990 CCTATAGGTTTCGAATCTCCTGATG 58.606 44.000 20.08 12.39 32.44 3.07
3251 3438 2.911484 AGGTTTCGAATCTCCTGATGC 58.089 47.619 13.67 0.00 32.44 3.91
3252 3439 2.237143 AGGTTTCGAATCTCCTGATGCA 59.763 45.455 13.67 0.00 32.44 3.96
3253 3440 3.118112 AGGTTTCGAATCTCCTGATGCAT 60.118 43.478 0.00 0.00 32.44 3.96
3254 3441 4.101585 AGGTTTCGAATCTCCTGATGCATA 59.898 41.667 13.67 0.00 32.44 3.14
3255 3442 4.450419 GGTTTCGAATCTCCTGATGCATAG 59.550 45.833 0.00 0.00 32.44 2.23
3256 3443 4.944619 TTCGAATCTCCTGATGCATAGT 57.055 40.909 0.00 0.00 32.44 2.12
3257 3444 4.248691 TCGAATCTCCTGATGCATAGTG 57.751 45.455 0.00 0.00 32.44 2.74
3258 3445 3.891366 TCGAATCTCCTGATGCATAGTGA 59.109 43.478 0.00 0.00 32.44 3.41
3259 3446 4.022503 TCGAATCTCCTGATGCATAGTGAG 60.023 45.833 0.00 5.84 32.44 3.51
3260 3447 4.567971 GAATCTCCTGATGCATAGTGAGG 58.432 47.826 15.10 11.29 32.44 3.86
3261 3448 3.319031 TCTCCTGATGCATAGTGAGGA 57.681 47.619 15.10 14.08 0.00 3.71
3262 3449 3.646534 TCTCCTGATGCATAGTGAGGAA 58.353 45.455 15.10 6.64 32.39 3.36
3263 3450 3.640498 TCTCCTGATGCATAGTGAGGAAG 59.360 47.826 15.10 10.43 32.39 3.46
3264 3451 2.702478 TCCTGATGCATAGTGAGGAAGG 59.298 50.000 0.00 0.00 29.62 3.46
3265 3452 2.492012 CTGATGCATAGTGAGGAAGGC 58.508 52.381 0.00 0.00 0.00 4.35
3266 3453 1.839354 TGATGCATAGTGAGGAAGGCA 59.161 47.619 0.00 0.00 35.54 4.75
3267 3454 2.158856 TGATGCATAGTGAGGAAGGCAG 60.159 50.000 0.00 0.00 34.43 4.85
3268 3455 0.107508 TGCATAGTGAGGAAGGCAGC 60.108 55.000 0.00 0.00 0.00 5.25
3269 3456 0.817229 GCATAGTGAGGAAGGCAGCC 60.817 60.000 1.84 1.84 0.00 4.85
3270 3457 0.179034 CATAGTGAGGAAGGCAGCCC 60.179 60.000 8.22 0.00 0.00 5.19
3271 3458 0.327000 ATAGTGAGGAAGGCAGCCCT 60.327 55.000 8.22 0.00 45.77 5.19
3272 3459 1.267574 TAGTGAGGAAGGCAGCCCTG 61.268 60.000 8.22 0.00 41.90 4.45
3273 3460 3.333219 TGAGGAAGGCAGCCCTGG 61.333 66.667 8.22 0.00 41.90 4.45
3274 3461 3.334054 GAGGAAGGCAGCCCTGGT 61.334 66.667 8.22 0.00 41.90 4.00
3275 3462 2.860971 AGGAAGGCAGCCCTGGTT 60.861 61.111 8.22 0.00 41.90 3.67
3276 3463 2.677875 GGAAGGCAGCCCTGGTTG 60.678 66.667 8.22 0.00 41.90 3.77
3277 3464 2.116125 GAAGGCAGCCCTGGTTGT 59.884 61.111 8.22 0.00 41.90 3.32
3278 3465 1.973812 GAAGGCAGCCCTGGTTGTC 60.974 63.158 8.22 0.00 41.90 3.18
3279 3466 3.850098 AAGGCAGCCCTGGTTGTCG 62.850 63.158 8.22 0.00 41.90 4.35
3281 3468 4.643387 GCAGCCCTGGTTGTCGGT 62.643 66.667 1.90 0.00 0.00 4.69
3282 3469 3.065306 CAGCCCTGGTTGTCGGTA 58.935 61.111 0.00 0.00 0.00 4.02
3283 3470 1.373435 CAGCCCTGGTTGTCGGTAA 59.627 57.895 0.00 0.00 0.00 2.85
3284 3471 0.953960 CAGCCCTGGTTGTCGGTAAC 60.954 60.000 0.00 0.00 0.00 2.50
3285 3472 1.125711 AGCCCTGGTTGTCGGTAACT 61.126 55.000 0.00 0.00 0.00 2.24
3286 3473 0.953960 GCCCTGGTTGTCGGTAACTG 60.954 60.000 0.00 0.00 0.00 3.16
3287 3474 0.321298 CCCTGGTTGTCGGTAACTGG 60.321 60.000 0.00 5.84 0.00 4.00
3288 3475 0.395312 CCTGGTTGTCGGTAACTGGT 59.605 55.000 3.40 0.00 0.00 4.00
3289 3476 1.508632 CTGGTTGTCGGTAACTGGTG 58.491 55.000 3.40 0.00 0.00 4.17
3290 3477 1.069513 CTGGTTGTCGGTAACTGGTGA 59.930 52.381 3.40 0.00 0.00 4.02
3291 3478 1.695242 TGGTTGTCGGTAACTGGTGAT 59.305 47.619 3.40 0.00 0.00 3.06
3292 3479 2.105134 TGGTTGTCGGTAACTGGTGATT 59.895 45.455 3.40 0.00 0.00 2.57
3293 3480 3.324268 TGGTTGTCGGTAACTGGTGATTA 59.676 43.478 3.40 0.00 0.00 1.75
3294 3481 4.202336 TGGTTGTCGGTAACTGGTGATTAA 60.202 41.667 3.40 0.00 0.00 1.40
3295 3482 4.152938 GGTTGTCGGTAACTGGTGATTAAC 59.847 45.833 3.40 0.00 0.00 2.01
3296 3483 4.877378 TGTCGGTAACTGGTGATTAACT 57.123 40.909 0.00 0.00 0.00 2.24
3297 3484 5.217978 TGTCGGTAACTGGTGATTAACTT 57.782 39.130 0.00 0.00 0.00 2.66
3298 3485 4.992319 TGTCGGTAACTGGTGATTAACTTG 59.008 41.667 0.00 0.00 0.00 3.16
3299 3486 4.390909 GTCGGTAACTGGTGATTAACTTGG 59.609 45.833 0.00 0.00 0.00 3.61
3300 3487 3.126343 CGGTAACTGGTGATTAACTTGGC 59.874 47.826 0.00 0.00 0.00 4.52
3301 3488 3.442625 GGTAACTGGTGATTAACTTGGCC 59.557 47.826 0.00 0.00 0.00 5.36
3302 3489 2.969821 ACTGGTGATTAACTTGGCCA 57.030 45.000 0.00 0.00 0.00 5.36
3303 3490 3.237268 ACTGGTGATTAACTTGGCCAA 57.763 42.857 19.25 19.25 0.00 4.52
3304 3491 3.157087 ACTGGTGATTAACTTGGCCAAG 58.843 45.455 38.30 38.30 43.79 3.61
3305 3492 3.181434 ACTGGTGATTAACTTGGCCAAGA 60.181 43.478 44.50 27.25 40.79 3.02
3306 3493 3.420893 TGGTGATTAACTTGGCCAAGAG 58.579 45.455 44.50 26.10 40.79 2.85
3307 3494 2.755103 GGTGATTAACTTGGCCAAGAGG 59.245 50.000 44.50 24.91 40.79 3.69
3308 3495 3.561313 GGTGATTAACTTGGCCAAGAGGA 60.561 47.826 44.50 29.70 40.79 3.71
3309 3496 4.273318 GTGATTAACTTGGCCAAGAGGAT 58.727 43.478 44.50 32.25 40.79 3.24
3310 3497 4.336713 GTGATTAACTTGGCCAAGAGGATC 59.663 45.833 44.50 35.99 40.79 3.36
3311 3498 3.366052 TTAACTTGGCCAAGAGGATCC 57.634 47.619 44.50 2.48 40.79 3.36
3312 3499 1.376649 AACTTGGCCAAGAGGATCCT 58.623 50.000 44.50 22.71 40.79 3.24
3313 3500 0.622665 ACTTGGCCAAGAGGATCCTG 59.377 55.000 44.50 21.32 40.79 3.86
3314 3501 0.750911 CTTGGCCAAGAGGATCCTGC 60.751 60.000 37.60 16.31 40.79 4.85
3315 3502 1.210204 TTGGCCAAGAGGATCCTGCT 61.210 55.000 22.02 13.28 36.89 4.24
3316 3503 1.210204 TGGCCAAGAGGATCCTGCTT 61.210 55.000 22.02 18.38 36.89 3.91
3317 3504 0.750911 GGCCAAGAGGATCCTGCTTG 60.751 60.000 28.99 28.99 38.90 4.01
3318 3505 0.034670 GCCAAGAGGATCCTGCTTGT 60.035 55.000 30.95 9.99 37.82 3.16
3319 3506 1.210478 GCCAAGAGGATCCTGCTTGTA 59.790 52.381 30.95 0.00 37.82 2.41
3320 3507 2.356125 GCCAAGAGGATCCTGCTTGTAA 60.356 50.000 30.95 0.00 37.82 2.41
3321 3508 3.686691 GCCAAGAGGATCCTGCTTGTAAT 60.687 47.826 30.95 11.87 37.82 1.89
3322 3509 4.444876 GCCAAGAGGATCCTGCTTGTAATA 60.445 45.833 30.95 0.00 37.82 0.98
3323 3510 5.747248 GCCAAGAGGATCCTGCTTGTAATAT 60.747 44.000 30.95 7.16 37.82 1.28
3324 3511 5.704515 CCAAGAGGATCCTGCTTGTAATATG 59.295 44.000 30.95 20.41 37.82 1.78
3325 3512 6.464892 CCAAGAGGATCCTGCTTGTAATATGA 60.465 42.308 30.95 0.00 37.82 2.15
3326 3513 6.949117 AGAGGATCCTGCTTGTAATATGAT 57.051 37.500 22.02 0.00 33.66 2.45
3327 3514 7.327064 AGAGGATCCTGCTTGTAATATGATT 57.673 36.000 22.02 0.00 33.66 2.57
3328 3515 7.393216 AGAGGATCCTGCTTGTAATATGATTC 58.607 38.462 22.02 0.00 33.66 2.52
3329 3516 7.016957 AGAGGATCCTGCTTGTAATATGATTCA 59.983 37.037 22.02 0.00 33.66 2.57
3330 3517 7.166851 AGGATCCTGCTTGTAATATGATTCAG 58.833 38.462 15.29 0.00 0.00 3.02
3331 3518 6.128063 GGATCCTGCTTGTAATATGATTCAGC 60.128 42.308 3.84 0.00 0.00 4.26
3332 3519 4.751600 TCCTGCTTGTAATATGATTCAGCG 59.248 41.667 0.00 0.00 0.00 5.18
3333 3520 4.512944 CCTGCTTGTAATATGATTCAGCGT 59.487 41.667 0.00 0.00 0.00 5.07
3334 3521 5.333645 CCTGCTTGTAATATGATTCAGCGTC 60.334 44.000 0.00 0.00 0.00 5.19
3335 3522 5.115480 TGCTTGTAATATGATTCAGCGTCA 58.885 37.500 0.00 0.00 0.00 4.35
3336 3523 5.584251 TGCTTGTAATATGATTCAGCGTCAA 59.416 36.000 0.00 0.00 0.00 3.18
3337 3524 6.093357 TGCTTGTAATATGATTCAGCGTCAAA 59.907 34.615 0.00 0.00 0.00 2.69
3338 3525 6.412072 GCTTGTAATATGATTCAGCGTCAAAC 59.588 38.462 0.00 0.00 0.00 2.93
3339 3526 6.976636 TGTAATATGATTCAGCGTCAAACA 57.023 33.333 0.00 0.00 0.00 2.83
3340 3527 6.771076 TGTAATATGATTCAGCGTCAAACAC 58.229 36.000 0.00 0.00 0.00 3.32
3341 3528 6.593770 TGTAATATGATTCAGCGTCAAACACT 59.406 34.615 0.00 0.00 0.00 3.55
3342 3529 3.818961 ATGATTCAGCGTCAAACACTG 57.181 42.857 0.00 0.00 29.93 3.66
3343 3530 2.832563 TGATTCAGCGTCAAACACTGA 58.167 42.857 0.00 0.00 35.69 3.41
3348 3535 2.159099 TCAGCGTCAAACACTGACTCTT 60.159 45.455 3.61 0.00 45.80 2.85
3349 3536 3.067601 TCAGCGTCAAACACTGACTCTTA 59.932 43.478 3.61 0.00 45.80 2.10
3350 3537 3.182572 CAGCGTCAAACACTGACTCTTAC 59.817 47.826 3.61 0.00 45.80 2.34
3351 3538 3.068307 AGCGTCAAACACTGACTCTTACT 59.932 43.478 3.61 0.00 45.80 2.24
3352 3539 5.029190 AGCGTCAAACACTGACTCTTACTG 61.029 45.833 3.61 0.00 45.80 2.74
3354 3541 4.672587 TCAAACACTGACTCTTACTGCT 57.327 40.909 0.00 0.00 0.00 4.24
3355 3542 4.621991 TCAAACACTGACTCTTACTGCTC 58.378 43.478 0.00 0.00 0.00 4.26
3356 3543 2.999507 ACACTGACTCTTACTGCTCG 57.000 50.000 0.00 0.00 0.00 5.03
3357 3544 1.068194 ACACTGACTCTTACTGCTCGC 60.068 52.381 0.00 0.00 0.00 5.03
3358 3545 1.201181 CACTGACTCTTACTGCTCGCT 59.799 52.381 0.00 0.00 0.00 4.93
3359 3546 1.470890 ACTGACTCTTACTGCTCGCTC 59.529 52.381 0.00 0.00 0.00 5.03
3360 3547 1.742831 CTGACTCTTACTGCTCGCTCT 59.257 52.381 0.00 0.00 0.00 4.09
3361 3548 1.740585 TGACTCTTACTGCTCGCTCTC 59.259 52.381 0.00 0.00 0.00 3.20
3362 3549 1.740585 GACTCTTACTGCTCGCTCTCA 59.259 52.381 0.00 0.00 0.00 3.27
3363 3550 2.162608 GACTCTTACTGCTCGCTCTCAA 59.837 50.000 0.00 0.00 0.00 3.02
3364 3551 2.757868 ACTCTTACTGCTCGCTCTCAAT 59.242 45.455 0.00 0.00 0.00 2.57
3365 3552 3.114809 CTCTTACTGCTCGCTCTCAATG 58.885 50.000 0.00 0.00 0.00 2.82
3366 3553 2.755103 TCTTACTGCTCGCTCTCAATGA 59.245 45.455 0.00 0.00 0.00 2.57
3367 3554 3.382865 TCTTACTGCTCGCTCTCAATGAT 59.617 43.478 0.00 0.00 0.00 2.45
3368 3555 2.222007 ACTGCTCGCTCTCAATGATC 57.778 50.000 0.00 0.00 0.00 2.92
3369 3556 1.479730 ACTGCTCGCTCTCAATGATCA 59.520 47.619 0.00 0.00 0.00 2.92
3370 3557 2.102757 ACTGCTCGCTCTCAATGATCAT 59.897 45.455 1.18 1.18 0.00 2.45
3371 3558 2.476997 CTGCTCGCTCTCAATGATCATG 59.523 50.000 9.46 3.97 0.00 3.07
3372 3559 2.159000 TGCTCGCTCTCAATGATCATGT 60.159 45.455 9.46 0.00 0.00 3.21
3373 3560 2.871022 GCTCGCTCTCAATGATCATGTT 59.129 45.455 9.46 0.00 0.00 2.71
3374 3561 3.303197 GCTCGCTCTCAATGATCATGTTG 60.303 47.826 9.46 5.81 0.00 3.33
3375 3562 3.865446 TCGCTCTCAATGATCATGTTGT 58.135 40.909 9.46 0.00 0.00 3.32
3376 3563 3.619929 TCGCTCTCAATGATCATGTTGTG 59.380 43.478 9.46 6.85 0.00 3.33
3377 3564 3.692576 GCTCTCAATGATCATGTTGTGC 58.307 45.455 9.46 10.40 0.00 4.57
3378 3565 3.128068 GCTCTCAATGATCATGTTGTGCA 59.872 43.478 9.46 0.00 0.00 4.57
3379 3566 4.380128 GCTCTCAATGATCATGTTGTGCAA 60.380 41.667 9.46 0.00 0.00 4.08
3380 3567 5.305139 TCTCAATGATCATGTTGTGCAAG 57.695 39.130 9.46 0.00 0.00 4.01
3381 3568 5.005094 TCTCAATGATCATGTTGTGCAAGA 58.995 37.500 9.46 1.98 0.00 3.02
3382 3569 5.650703 TCTCAATGATCATGTTGTGCAAGAT 59.349 36.000 9.46 0.00 38.13 2.40
3383 3570 5.646606 TCAATGATCATGTTGTGCAAGATG 58.353 37.500 9.46 13.71 41.71 2.90
3387 3574 3.902261 TCATGTTGTGCAAGATGACAC 57.098 42.857 17.21 0.00 43.38 3.67
3388 3575 3.212685 TCATGTTGTGCAAGATGACACA 58.787 40.909 17.21 0.00 43.38 3.72
3394 3581 3.544684 TGTGCAAGATGACACAAGAAGT 58.455 40.909 0.00 0.00 43.48 3.01
3395 3582 3.561310 TGTGCAAGATGACACAAGAAGTC 59.439 43.478 0.00 0.00 43.48 3.01
3404 3591 4.825422 TGACACAAGAAGTCATGATCTCC 58.175 43.478 0.00 0.00 40.80 3.71
3405 3592 4.187694 GACACAAGAAGTCATGATCTCCC 58.812 47.826 0.00 0.00 36.06 4.30
3406 3593 3.584406 ACACAAGAAGTCATGATCTCCCA 59.416 43.478 0.00 0.00 0.00 4.37
3407 3594 3.937706 CACAAGAAGTCATGATCTCCCAC 59.062 47.826 0.00 0.00 0.00 4.61
3408 3595 3.584406 ACAAGAAGTCATGATCTCCCACA 59.416 43.478 0.00 0.00 0.00 4.17
3409 3596 4.226846 ACAAGAAGTCATGATCTCCCACAT 59.773 41.667 0.00 0.00 0.00 3.21
3410 3597 5.191426 CAAGAAGTCATGATCTCCCACATT 58.809 41.667 0.00 0.00 0.00 2.71
3411 3598 5.447778 AGAAGTCATGATCTCCCACATTT 57.552 39.130 0.00 0.00 0.00 2.32
3412 3599 5.191426 AGAAGTCATGATCTCCCACATTTG 58.809 41.667 0.00 0.00 0.00 2.32
3413 3600 4.849813 AGTCATGATCTCCCACATTTGA 57.150 40.909 0.00 0.00 0.00 2.69
3414 3601 5.384145 AGTCATGATCTCCCACATTTGAT 57.616 39.130 0.00 0.00 0.00 2.57
3415 3602 5.374921 AGTCATGATCTCCCACATTTGATC 58.625 41.667 0.00 0.00 36.72 2.92
3416 3603 5.132312 AGTCATGATCTCCCACATTTGATCT 59.868 40.000 0.00 0.00 37.00 2.75
3417 3604 5.826737 GTCATGATCTCCCACATTTGATCTT 59.173 40.000 0.00 0.00 37.00 2.40
3418 3605 6.320672 GTCATGATCTCCCACATTTGATCTTT 59.679 38.462 0.00 0.00 37.00 2.52
3419 3606 6.544931 TCATGATCTCCCACATTTGATCTTTC 59.455 38.462 0.00 0.00 37.00 2.62
3420 3607 4.877823 TGATCTCCCACATTTGATCTTTCG 59.122 41.667 0.00 0.00 37.00 3.46
3421 3608 4.551702 TCTCCCACATTTGATCTTTCGA 57.448 40.909 0.00 0.00 0.00 3.71
3422 3609 4.253685 TCTCCCACATTTGATCTTTCGAC 58.746 43.478 0.00 0.00 0.00 4.20
3423 3610 3.343617 TCCCACATTTGATCTTTCGACC 58.656 45.455 0.00 0.00 0.00 4.79
3424 3611 3.081061 CCCACATTTGATCTTTCGACCA 58.919 45.455 0.00 0.00 0.00 4.02
3425 3612 3.127548 CCCACATTTGATCTTTCGACCAG 59.872 47.826 0.00 0.00 0.00 4.00
3426 3613 3.127548 CCACATTTGATCTTTCGACCAGG 59.872 47.826 0.00 0.00 0.00 4.45
3427 3614 3.753272 CACATTTGATCTTTCGACCAGGT 59.247 43.478 0.00 0.00 0.00 4.00
3428 3615 4.003648 ACATTTGATCTTTCGACCAGGTC 58.996 43.478 9.92 9.92 0.00 3.85
3429 3616 4.256920 CATTTGATCTTTCGACCAGGTCT 58.743 43.478 17.95 0.00 0.00 3.85
3430 3617 3.319137 TTGATCTTTCGACCAGGTCTG 57.681 47.619 17.95 11.06 0.00 3.51
3431 3618 2.525368 TGATCTTTCGACCAGGTCTGA 58.475 47.619 17.95 13.16 0.00 3.27
3432 3619 2.493675 TGATCTTTCGACCAGGTCTGAG 59.506 50.000 17.95 11.78 0.00 3.35
3433 3620 0.603569 TCTTTCGACCAGGTCTGAGC 59.396 55.000 17.95 0.00 0.00 4.26
3434 3621 0.734253 CTTTCGACCAGGTCTGAGCG 60.734 60.000 17.95 4.62 0.00 5.03
3435 3622 2.154798 TTTCGACCAGGTCTGAGCGG 62.155 60.000 17.95 13.49 0.00 5.52
3436 3623 4.135153 CGACCAGGTCTGAGCGGG 62.135 72.222 21.71 21.71 36.99 6.13
3437 3624 2.997897 GACCAGGTCTGAGCGGGT 60.998 66.667 27.44 27.44 46.41 5.28
3438 3625 2.526873 ACCAGGTCTGAGCGGGTT 60.527 61.111 22.98 9.84 41.23 4.11
3439 3626 1.229082 ACCAGGTCTGAGCGGGTTA 60.229 57.895 22.98 0.00 41.23 2.85
3440 3627 1.218316 CCAGGTCTGAGCGGGTTAC 59.782 63.158 16.40 0.00 0.00 2.50
3441 3628 1.258445 CCAGGTCTGAGCGGGTTACT 61.258 60.000 16.40 0.00 0.00 2.24
3442 3629 0.108615 CAGGTCTGAGCGGGTTACTG 60.109 60.000 0.62 0.00 0.00 2.74
3443 3630 1.218316 GGTCTGAGCGGGTTACTGG 59.782 63.158 0.00 0.00 0.00 4.00
3444 3631 1.255667 GGTCTGAGCGGGTTACTGGA 61.256 60.000 0.00 0.00 0.00 3.86
3445 3632 0.108756 GTCTGAGCGGGTTACTGGAC 60.109 60.000 0.00 0.00 0.00 4.02
3446 3633 0.541063 TCTGAGCGGGTTACTGGACA 60.541 55.000 0.00 0.00 0.00 4.02
3447 3634 0.320374 CTGAGCGGGTTACTGGACAA 59.680 55.000 0.00 0.00 0.00 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
109 110 4.191544 TCATCCCAGTTCATTTAAGCTCG 58.808 43.478 0.00 0.00 0.00 5.03
113 114 6.824305 ACTGTTCATCCCAGTTCATTTAAG 57.176 37.500 0.00 0.00 40.14 1.85
115 116 8.698973 TTTTACTGTTCATCCCAGTTCATTTA 57.301 30.769 0.00 0.00 42.83 1.40
122 123 7.505585 TCTTTTGATTTTACTGTTCATCCCAGT 59.494 33.333 0.00 0.00 44.90 4.00
125 126 9.541143 TTTTCTTTTGATTTTACTGTTCATCCC 57.459 29.630 0.00 0.00 0.00 3.85
152 160 9.679661 AAGGTTACCACAAAAAGAAATCATTTT 57.320 25.926 3.51 0.00 0.00 1.82
156 164 9.589111 GTTAAAGGTTACCACAAAAAGAAATCA 57.411 29.630 3.51 0.00 0.00 2.57
157 165 9.589111 TGTTAAAGGTTACCACAAAAAGAAATC 57.411 29.630 3.51 0.00 0.00 2.17
159 167 9.774413 TTTGTTAAAGGTTACCACAAAAAGAAA 57.226 25.926 13.14 4.90 35.06 2.52
160 168 9.945904 ATTTGTTAAAGGTTACCACAAAAAGAA 57.054 25.926 17.55 2.47 39.94 2.52
161 169 9.372369 CATTTGTTAAAGGTTACCACAAAAAGA 57.628 29.630 17.55 0.95 39.94 2.52
162 170 9.157104 ACATTTGTTAAAGGTTACCACAAAAAG 57.843 29.630 17.55 15.42 39.94 2.27
166 183 9.152595 GAAAACATTTGTTAAAGGTTACCACAA 57.847 29.630 3.51 2.36 43.69 3.33
186 203 9.376075 TGACAAAAATTTCAAGCATAGAAAACA 57.624 25.926 0.00 0.00 38.36 2.83
187 204 9.636965 GTGACAAAAATTTCAAGCATAGAAAAC 57.363 29.630 0.00 0.00 38.36 2.43
188 205 8.538856 CGTGACAAAAATTTCAAGCATAGAAAA 58.461 29.630 0.00 0.00 38.36 2.29
222 241 1.974265 TTGCCATGACTTCCACGAAA 58.026 45.000 0.00 0.00 0.00 3.46
225 244 2.791383 TTTTTGCCATGACTTCCACG 57.209 45.000 0.00 0.00 0.00 4.94
256 275 8.962884 ATTTTTGAAAGCATTTTGGAGTACTT 57.037 26.923 0.00 0.00 39.27 2.24
314 334 1.523758 ACATTTCTGGAAGTCGTGGC 58.476 50.000 0.00 0.00 33.76 5.01
315 335 3.138304 TGAACATTTCTGGAAGTCGTGG 58.862 45.455 0.00 0.00 33.76 4.94
354 374 6.803320 CCTTTGACAAATGTACTATGTGCTTG 59.197 38.462 0.05 0.00 0.00 4.01
356 376 6.003950 ACCTTTGACAAATGTACTATGTGCT 58.996 36.000 7.02 0.00 0.00 4.40
406 435 8.653191 TGAACAGTAAAACCAGGAAAGATAGTA 58.347 33.333 0.00 0.00 0.00 1.82
412 441 5.828299 TGTGAACAGTAAAACCAGGAAAG 57.172 39.130 0.00 0.00 0.00 2.62
416 445 5.290885 GCTTTTTGTGAACAGTAAAACCAGG 59.709 40.000 0.00 0.00 0.00 4.45
417 446 5.866633 TGCTTTTTGTGAACAGTAAAACCAG 59.133 36.000 0.00 0.00 0.00 4.00
420 449 8.439286 TCAAATGCTTTTTGTGAACAGTAAAAC 58.561 29.630 10.97 0.00 0.00 2.43
424 453 5.748152 GCTCAAATGCTTTTTGTGAACAGTA 59.252 36.000 14.67 0.00 0.00 2.74
433 462 3.180980 CACACGAGCTCAAATGCTTTTTG 59.819 43.478 15.40 6.41 44.17 2.44
434 463 3.374745 CACACGAGCTCAAATGCTTTTT 58.625 40.909 15.40 0.00 44.17 1.94
436 465 1.335324 GCACACGAGCTCAAATGCTTT 60.335 47.619 20.27 0.00 44.17 3.51
447 476 2.310577 GTGAAGAATTTGCACACGAGC 58.689 47.619 0.00 0.00 32.96 5.03
452 481 2.293170 TGGACGTGAAGAATTTGCACA 58.707 42.857 0.00 0.00 32.96 4.57
461 490 7.504924 ACATAATTTTCTTTGGACGTGAAGA 57.495 32.000 0.00 0.00 0.00 2.87
466 495 7.936584 TGAAGAACATAATTTTCTTTGGACGT 58.063 30.769 5.34 0.00 42.21 4.34
468 497 9.528018 TGTTGAAGAACATAATTTTCTTTGGAC 57.472 29.630 5.34 5.73 42.21 4.02
493 522 2.295885 GACCAATGGAGAAGGCAGATG 58.704 52.381 6.16 0.00 0.00 2.90
601 644 3.601443 TCAAAAAGTTGTGGTGTTGGG 57.399 42.857 0.00 0.00 36.07 4.12
604 647 5.659440 AGTGATCAAAAAGTTGTGGTGTT 57.341 34.783 0.00 0.00 36.07 3.32
605 648 5.184864 TGAAGTGATCAAAAAGTTGTGGTGT 59.815 36.000 0.00 0.00 34.30 4.16
607 650 5.913137 TGAAGTGATCAAAAAGTTGTGGT 57.087 34.783 0.00 0.00 34.30 4.16
695 738 4.022068 CCGGTTTGTTAGTGTAGTGGACTA 60.022 45.833 0.00 0.00 0.00 2.59
696 739 3.243975 CCGGTTTGTTAGTGTAGTGGACT 60.244 47.826 0.00 0.00 0.00 3.85
697 740 3.062042 CCGGTTTGTTAGTGTAGTGGAC 58.938 50.000 0.00 0.00 0.00 4.02
698 741 2.548493 GCCGGTTTGTTAGTGTAGTGGA 60.548 50.000 1.90 0.00 0.00 4.02
699 742 1.802365 GCCGGTTTGTTAGTGTAGTGG 59.198 52.381 1.90 0.00 0.00 4.00
700 743 1.802365 GGCCGGTTTGTTAGTGTAGTG 59.198 52.381 1.90 0.00 0.00 2.74
701 744 1.271001 GGGCCGGTTTGTTAGTGTAGT 60.271 52.381 1.90 0.00 0.00 2.73
702 745 1.270947 TGGGCCGGTTTGTTAGTGTAG 60.271 52.381 1.90 0.00 0.00 2.74
724 767 0.614979 GAGGAGTGGACTGGGCTGTA 60.615 60.000 0.00 0.00 0.00 2.74
783 826 0.104304 AGGACCACAACGTCAGTGAC 59.896 55.000 19.20 13.56 39.30 3.67
796 839 3.009115 GGGCAGGCAGTAGGACCA 61.009 66.667 0.00 0.00 0.00 4.02
831 874 4.593864 GAGGATGGGGCGCGTCTC 62.594 72.222 21.22 7.38 0.00 3.36
847 891 3.072468 GTGGACGGTCGGGATGGA 61.072 66.667 1.43 0.00 0.00 3.41
928 972 2.901042 CTGGGCTAGGGTTCGACC 59.099 66.667 0.00 0.00 37.60 4.79
1083 1130 0.794981 CGAAGTCGAGCGACCTGAAG 60.795 60.000 18.28 3.82 45.59 3.02
1293 1340 2.283388 AGCGGGAGGACGTTACCA 60.283 61.111 0.00 0.00 35.98 3.25
1296 1343 3.136123 CGGAGCGGGAGGACGTTA 61.136 66.667 0.00 0.00 35.98 3.18
1422 1469 1.227823 CCTTGAGGTGCCGTTGTCA 60.228 57.895 0.00 0.00 0.00 3.58
1448 1495 0.494095 AGAGGGGTGAGAGGAAAGGT 59.506 55.000 0.00 0.00 0.00 3.50
1468 1515 8.319057 TCTAACCATGGTCATGTACTTTAGAT 57.681 34.615 20.07 0.00 37.11 1.98
1484 1535 3.182967 GAGAACGTCAGCTCTAACCATG 58.817 50.000 0.00 0.00 0.00 3.66
1494 1545 0.889306 ACTACCAGGAGAACGTCAGC 59.111 55.000 0.00 0.00 0.00 4.26
1530 1581 8.839343 CATTTCCTACAGCAAATCACATACATA 58.161 33.333 0.00 0.00 0.00 2.29
1543 1594 6.602803 TGAGCATTTAATCATTTCCTACAGCA 59.397 34.615 0.00 0.00 0.00 4.41
1574 1625 7.169813 GCAGTGAACGAACATATATTCAGATCA 59.830 37.037 0.00 0.00 31.94 2.92
1765 1818 5.587844 AGGTTAACAGAAGAGCAAGCATATG 59.412 40.000 8.10 0.00 0.00 1.78
1786 1876 9.277783 GAAAGCATATCATGTACAATTCTAGGT 57.722 33.333 0.00 0.00 0.00 3.08
1794 1884 8.565896 AACAGAAGAAAGCATATCATGTACAA 57.434 30.769 0.00 0.00 0.00 2.41
1821 1911 5.748402 AGCATATCATGACAAGTTCAAGGA 58.252 37.500 0.00 0.00 37.92 3.36
1823 1913 9.661187 GATAAAGCATATCATGACAAGTTCAAG 57.339 33.333 0.00 0.00 37.92 3.02
1847 1937 9.376075 CACATGTCTAACAAGATAACAGAAGAT 57.624 33.333 0.00 0.00 0.00 2.40
1914 2046 8.609176 GTGATCATAATTCTTAAAGCACGGTAA 58.391 33.333 0.00 0.00 0.00 2.85
1971 2106 7.033791 TCTCGTACTGACAAGGAAATGATAAC 58.966 38.462 0.00 0.00 0.00 1.89
1981 2116 5.917447 CACATATGATCTCGTACTGACAAGG 59.083 44.000 10.38 0.00 0.00 3.61
2055 2214 8.615878 AACTGTGTCTAAATATTTGTACAGCA 57.384 30.769 22.18 17.48 38.20 4.41
2512 2671 3.312421 CCGAGCAAAAACGACATCCATAT 59.688 43.478 0.00 0.00 0.00 1.78
2547 2706 7.218204 GCGAAAACTGATAACAAATATCACCAC 59.782 37.037 0.00 0.00 44.30 4.16
2591 2750 4.935808 ACAATCTTCTTTATGTGGACCGAC 59.064 41.667 0.00 0.00 0.00 4.79
2613 2772 5.041951 TCGACAAACAAATATCCAAGCAC 57.958 39.130 0.00 0.00 0.00 4.40
2706 2868 5.813717 ACCAAACAAAACTACGTTTAGAGC 58.186 37.500 0.00 0.00 34.43 4.09
2742 2904 5.406780 CCACGAGATAATAGCAAACATCCTC 59.593 44.000 0.00 0.00 0.00 3.71
2743 2905 5.163301 ACCACGAGATAATAGCAAACATCCT 60.163 40.000 0.00 0.00 0.00 3.24
2744 2906 5.057149 ACCACGAGATAATAGCAAACATCC 58.943 41.667 0.00 0.00 0.00 3.51
2755 2924 7.703058 AAATTCCAAAGAACCACGAGATAAT 57.297 32.000 0.00 0.00 33.97 1.28
2756 2925 7.519032 AAAATTCCAAAGAACCACGAGATAA 57.481 32.000 0.00 0.00 33.97 1.75
2789 2958 9.003658 GCAGGTATATTTATATATGCATCACCC 57.996 37.037 0.19 0.00 34.91 4.61
2807 2994 6.480981 GGTAAGCGATGTAAAAAGCAGGTATA 59.519 38.462 0.00 0.00 0.00 1.47
2849 3036 8.587952 ACAAATTTACATTTACCTCAGTTTGC 57.412 30.769 0.00 0.00 30.90 3.68
2920 3107 5.163509 TGCTCTAAGTACATAGAGGCAGTTG 60.164 44.000 27.71 9.59 45.93 3.16
2946 3133 7.216494 CCACCCTGAATTTTCAAATTTACACT 58.784 34.615 0.00 0.00 38.64 3.55
2947 3134 6.426633 CCCACCCTGAATTTTCAAATTTACAC 59.573 38.462 0.00 0.00 38.64 2.90
2948 3135 6.529220 CCCACCCTGAATTTTCAAATTTACA 58.471 36.000 0.00 0.00 38.64 2.41
2949 3136 5.411361 GCCCACCCTGAATTTTCAAATTTAC 59.589 40.000 0.00 0.00 38.64 2.01
2950 3137 5.513962 GGCCCACCCTGAATTTTCAAATTTA 60.514 40.000 0.00 0.00 38.64 1.40
2951 3138 4.397420 GCCCACCCTGAATTTTCAAATTT 58.603 39.130 0.00 0.00 38.64 1.82
2952 3139 3.244875 GGCCCACCCTGAATTTTCAAATT 60.245 43.478 0.00 0.00 41.06 1.82
2953 3140 2.305635 GGCCCACCCTGAATTTTCAAAT 59.694 45.455 0.00 0.00 36.64 2.32
2954 3141 1.696884 GGCCCACCCTGAATTTTCAAA 59.303 47.619 0.00 0.00 36.64 2.69
2955 3142 1.347062 GGCCCACCCTGAATTTTCAA 58.653 50.000 0.00 0.00 36.64 2.69
2956 3143 0.897863 CGGCCCACCCTGAATTTTCA 60.898 55.000 0.00 0.00 35.57 2.69
2957 3144 0.610785 TCGGCCCACCCTGAATTTTC 60.611 55.000 0.00 0.00 0.00 2.29
2958 3145 0.041090 ATCGGCCCACCCTGAATTTT 59.959 50.000 0.00 0.00 0.00 1.82
2959 3146 0.395724 GATCGGCCCACCCTGAATTT 60.396 55.000 0.00 0.00 0.00 1.82
2960 3147 1.227383 GATCGGCCCACCCTGAATT 59.773 57.895 0.00 0.00 0.00 2.17
2961 3148 2.919043 GATCGGCCCACCCTGAAT 59.081 61.111 0.00 0.00 0.00 2.57
2962 3149 3.781307 CGATCGGCCCACCCTGAA 61.781 66.667 7.38 0.00 0.00 3.02
2967 3154 4.851179 GAACCCGATCGGCCCACC 62.851 72.222 29.12 11.09 33.26 4.61
2968 3155 4.851179 GGAACCCGATCGGCCCAC 62.851 72.222 29.12 17.50 33.26 4.61
2969 3156 3.682644 TAGGAACCCGATCGGCCCA 62.683 63.158 29.12 10.98 33.26 5.36
2970 3157 2.841044 TAGGAACCCGATCGGCCC 60.841 66.667 29.12 25.40 33.26 5.80
2971 3158 2.735237 CTAGGAACCCGATCGGCC 59.265 66.667 29.12 23.25 33.26 6.13
2972 3159 2.735237 CCTAGGAACCCGATCGGC 59.265 66.667 29.12 15.03 33.26 5.54
2973 3160 2.735237 GCCTAGGAACCCGATCGG 59.265 66.667 27.65 27.65 37.81 4.18
2974 3161 2.335369 CGCCTAGGAACCCGATCG 59.665 66.667 14.75 8.51 0.00 3.69
2975 3162 1.363080 GACGCCTAGGAACCCGATC 59.637 63.158 14.75 3.52 0.00 3.69
2976 3163 2.487532 CGACGCCTAGGAACCCGAT 61.488 63.158 14.75 0.00 0.00 4.18
2977 3164 2.898920 ATCGACGCCTAGGAACCCGA 62.899 60.000 14.75 14.90 0.00 5.14
2978 3165 2.012902 AATCGACGCCTAGGAACCCG 62.013 60.000 14.75 9.11 0.00 5.28
2979 3166 0.177373 AAATCGACGCCTAGGAACCC 59.823 55.000 14.75 0.00 0.00 4.11
2980 3167 1.568606 GAAATCGACGCCTAGGAACC 58.431 55.000 14.75 0.00 0.00 3.62
2981 3168 1.197910 CGAAATCGACGCCTAGGAAC 58.802 55.000 14.75 1.37 43.02 3.62
2982 3169 0.101759 CCGAAATCGACGCCTAGGAA 59.898 55.000 14.75 0.00 43.02 3.36
2983 3170 1.033746 ACCGAAATCGACGCCTAGGA 61.034 55.000 14.75 0.00 43.02 2.94
2984 3171 0.179119 AACCGAAATCGACGCCTAGG 60.179 55.000 3.67 3.67 43.02 3.02
2985 3172 1.197910 GAACCGAAATCGACGCCTAG 58.802 55.000 4.04 0.00 43.02 3.02
2986 3173 0.813184 AGAACCGAAATCGACGCCTA 59.187 50.000 4.04 0.00 43.02 3.93
2987 3174 0.037605 AAGAACCGAAATCGACGCCT 60.038 50.000 4.04 0.00 43.02 5.52
2988 3175 0.794473 AAAGAACCGAAATCGACGCC 59.206 50.000 4.04 0.00 43.02 5.68
2989 3176 1.524391 CGAAAGAACCGAAATCGACGC 60.524 52.381 4.04 0.00 43.02 5.19
2990 3177 1.058695 CCGAAAGAACCGAAATCGACG 59.941 52.381 4.04 0.00 43.02 5.12
2991 3178 1.201888 GCCGAAAGAACCGAAATCGAC 60.202 52.381 4.04 0.00 43.02 4.20
2992 3179 1.073177 GCCGAAAGAACCGAAATCGA 58.927 50.000 4.04 0.00 43.02 3.59
2993 3180 0.247145 CGCCGAAAGAACCGAAATCG 60.247 55.000 0.00 0.00 39.44 3.34
2994 3181 0.520619 GCGCCGAAAGAACCGAAATC 60.521 55.000 0.00 0.00 0.00 2.17
2995 3182 1.231958 TGCGCCGAAAGAACCGAAAT 61.232 50.000 4.18 0.00 0.00 2.17
2996 3183 1.437772 TTGCGCCGAAAGAACCGAAA 61.438 50.000 4.18 0.00 0.00 3.46
2997 3184 1.437772 TTTGCGCCGAAAGAACCGAA 61.438 50.000 4.18 0.00 0.00 4.30
2998 3185 1.888172 TTTGCGCCGAAAGAACCGA 60.888 52.632 4.18 0.00 0.00 4.69
2999 3186 1.724581 GTTTGCGCCGAAAGAACCG 60.725 57.895 4.18 0.00 0.00 4.44
3000 3187 0.660300 CAGTTTGCGCCGAAAGAACC 60.660 55.000 4.18 0.00 0.00 3.62
3001 3188 0.660300 CCAGTTTGCGCCGAAAGAAC 60.660 55.000 4.18 0.32 0.00 3.01
3002 3189 1.652012 CCAGTTTGCGCCGAAAGAA 59.348 52.632 4.18 0.00 0.00 2.52
3003 3190 2.903547 GCCAGTTTGCGCCGAAAGA 61.904 57.895 4.18 0.00 0.00 2.52
3004 3191 2.429069 GCCAGTTTGCGCCGAAAG 60.429 61.111 4.18 0.00 0.00 2.62
3005 3192 3.972276 GGCCAGTTTGCGCCGAAA 61.972 61.111 4.18 0.00 34.94 3.46
3009 3196 2.730066 AAAATGGGCCAGTTTGCGCC 62.730 55.000 29.12 0.00 42.99 6.53
3010 3197 0.884259 AAAAATGGGCCAGTTTGCGC 60.884 50.000 30.15 0.00 43.84 6.09
3011 3198 3.304041 AAAAATGGGCCAGTTTGCG 57.696 47.368 30.15 0.00 32.02 4.85
3026 3213 5.557891 TTTCGACCGAAACTGGTTAAAAA 57.442 34.783 12.83 0.00 44.01 1.94
3027 3214 5.754543 ATTTCGACCGAAACTGGTTAAAA 57.245 34.783 18.15 0.00 45.34 1.52
3028 3215 5.296283 TCAATTTCGACCGAAACTGGTTAAA 59.704 36.000 20.90 4.22 45.34 1.52
3029 3216 4.815308 TCAATTTCGACCGAAACTGGTTAA 59.185 37.500 20.90 4.53 45.34 2.01
3030 3217 4.211794 GTCAATTTCGACCGAAACTGGTTA 59.788 41.667 20.90 4.82 45.34 2.85
3031 3218 3.002965 GTCAATTTCGACCGAAACTGGTT 59.997 43.478 20.90 9.95 45.34 3.67
3032 3219 2.546789 GTCAATTTCGACCGAAACTGGT 59.453 45.455 20.90 5.07 45.34 4.00
3033 3220 2.095919 GGTCAATTTCGACCGAAACTGG 60.096 50.000 20.90 13.27 45.77 4.00
3034 3221 3.183237 GGTCAATTTCGACCGAAACTG 57.817 47.619 18.15 17.50 45.77 3.16
3042 3229 2.094752 CCAATGGTGGGTCAATTTCGAC 60.095 50.000 0.00 0.00 41.77 4.20
3043 3230 2.166829 CCAATGGTGGGTCAATTTCGA 58.833 47.619 0.00 0.00 41.77 3.71
3044 3231 1.404047 GCCAATGGTGGGTCAATTTCG 60.404 52.381 0.00 0.00 46.09 3.46
3045 3232 1.404047 CGCCAATGGTGGGTCAATTTC 60.404 52.381 4.63 0.00 46.09 2.17
3046 3233 0.607620 CGCCAATGGTGGGTCAATTT 59.392 50.000 4.63 0.00 46.09 1.82
3047 3234 0.541764 ACGCCAATGGTGGGTCAATT 60.542 50.000 17.93 0.00 46.09 2.32
3048 3235 0.541764 AACGCCAATGGTGGGTCAAT 60.542 50.000 17.93 0.00 46.09 2.57
3049 3236 1.152652 AACGCCAATGGTGGGTCAA 60.153 52.632 17.93 0.00 46.09 3.18
3050 3237 1.900981 CAACGCCAATGGTGGGTCA 60.901 57.895 17.93 0.00 46.09 4.02
3051 3238 0.965363 ATCAACGCCAATGGTGGGTC 60.965 55.000 17.93 0.00 46.09 4.46
3052 3239 0.541764 AATCAACGCCAATGGTGGGT 60.542 50.000 17.93 1.39 46.09 4.51
3053 3240 0.108709 CAATCAACGCCAATGGTGGG 60.109 55.000 17.93 8.98 46.09 4.61
3055 3242 2.945447 ATCAATCAACGCCAATGGTG 57.055 45.000 11.86 11.86 39.41 4.17
3056 3243 5.596836 ATTTATCAATCAACGCCAATGGT 57.403 34.783 0.00 0.00 0.00 3.55
3057 3244 6.907206 AAATTTATCAATCAACGCCAATGG 57.093 33.333 0.00 0.00 0.00 3.16
3058 3245 7.181418 CCAAAATTTATCAATCAACGCCAATG 58.819 34.615 0.00 0.00 0.00 2.82
3059 3246 6.183360 GCCAAAATTTATCAATCAACGCCAAT 60.183 34.615 0.00 0.00 0.00 3.16
3060 3247 5.121454 GCCAAAATTTATCAATCAACGCCAA 59.879 36.000 0.00 0.00 0.00 4.52
3061 3248 4.629200 GCCAAAATTTATCAATCAACGCCA 59.371 37.500 0.00 0.00 0.00 5.69
3062 3249 4.033932 GGCCAAAATTTATCAATCAACGCC 59.966 41.667 0.00 0.00 0.00 5.68
3063 3250 4.033932 GGGCCAAAATTTATCAATCAACGC 59.966 41.667 4.39 0.00 0.00 4.84
3064 3251 5.174395 TGGGCCAAAATTTATCAATCAACG 58.826 37.500 2.13 0.00 0.00 4.10
3065 3252 7.986889 ACTATGGGCCAAAATTTATCAATCAAC 59.013 33.333 11.89 0.00 0.00 3.18
3066 3253 7.986320 CACTATGGGCCAAAATTTATCAATCAA 59.014 33.333 11.89 0.00 0.00 2.57
3067 3254 7.125507 ACACTATGGGCCAAAATTTATCAATCA 59.874 33.333 11.89 0.00 0.00 2.57
3068 3255 7.500141 ACACTATGGGCCAAAATTTATCAATC 58.500 34.615 11.89 0.00 0.00 2.67
3069 3256 7.436320 ACACTATGGGCCAAAATTTATCAAT 57.564 32.000 11.89 0.00 0.00 2.57
3070 3257 6.865834 ACACTATGGGCCAAAATTTATCAA 57.134 33.333 11.89 0.00 0.00 2.57
3071 3258 7.962995 TTACACTATGGGCCAAAATTTATCA 57.037 32.000 11.89 0.00 0.00 2.15
3072 3259 9.830975 AATTTACACTATGGGCCAAAATTTATC 57.169 29.630 11.89 0.00 0.00 1.75
3073 3260 9.830975 GAATTTACACTATGGGCCAAAATTTAT 57.169 29.630 19.80 2.75 0.00 1.40
3074 3261 8.816894 TGAATTTACACTATGGGCCAAAATTTA 58.183 29.630 19.80 15.18 0.00 1.40
3075 3262 7.684529 TGAATTTACACTATGGGCCAAAATTT 58.315 30.769 19.80 4.10 0.00 1.82
3076 3263 7.251321 TGAATTTACACTATGGGCCAAAATT 57.749 32.000 19.20 19.20 0.00 1.82
3077 3264 6.865834 TGAATTTACACTATGGGCCAAAAT 57.134 33.333 11.89 8.14 0.00 1.82
3078 3265 6.042093 TGTTGAATTTACACTATGGGCCAAAA 59.958 34.615 11.89 5.68 0.00 2.44
3079 3266 5.540337 TGTTGAATTTACACTATGGGCCAAA 59.460 36.000 11.89 0.00 0.00 3.28
3080 3267 5.080337 TGTTGAATTTACACTATGGGCCAA 58.920 37.500 11.89 0.00 0.00 4.52
3081 3268 4.667573 TGTTGAATTTACACTATGGGCCA 58.332 39.130 9.61 9.61 0.00 5.36
3082 3269 5.852282 ATGTTGAATTTACACTATGGGCC 57.148 39.130 0.00 0.00 0.00 5.80
3083 3270 6.918022 GCTTATGTTGAATTTACACTATGGGC 59.082 38.462 0.00 0.00 0.00 5.36
3084 3271 8.225603 AGCTTATGTTGAATTTACACTATGGG 57.774 34.615 0.00 0.00 0.00 4.00
3162 3349 1.065551 GCTCAAGGACAACGCTTTGTT 59.934 47.619 10.21 0.00 46.43 2.83
3164 3351 0.040067 GGCTCAAGGACAACGCTTTG 60.040 55.000 0.65 0.65 38.83 2.77
3165 3352 0.179018 AGGCTCAAGGACAACGCTTT 60.179 50.000 0.00 0.00 0.00 3.51
3166 3353 0.179018 AAGGCTCAAGGACAACGCTT 60.179 50.000 0.00 0.00 0.00 4.68
3167 3354 0.603975 GAAGGCTCAAGGACAACGCT 60.604 55.000 0.00 0.00 0.00 5.07
3168 3355 1.869690 GAAGGCTCAAGGACAACGC 59.130 57.895 0.00 0.00 0.00 4.84
3169 3356 0.600255 ACGAAGGCTCAAGGACAACG 60.600 55.000 0.00 0.00 0.00 4.10
3170 3357 2.029290 TCTACGAAGGCTCAAGGACAAC 60.029 50.000 0.00 0.00 0.00 3.32
3171 3358 2.029290 GTCTACGAAGGCTCAAGGACAA 60.029 50.000 0.00 0.00 0.00 3.18
3172 3359 1.544691 GTCTACGAAGGCTCAAGGACA 59.455 52.381 0.00 0.00 0.00 4.02
3173 3360 1.467713 CGTCTACGAAGGCTCAAGGAC 60.468 57.143 0.00 0.00 43.02 3.85
3174 3361 0.809385 CGTCTACGAAGGCTCAAGGA 59.191 55.000 0.00 0.00 43.02 3.36
3175 3362 0.802607 GCGTCTACGAAGGCTCAAGG 60.803 60.000 6.71 0.00 43.02 3.61
3176 3363 0.171455 AGCGTCTACGAAGGCTCAAG 59.829 55.000 6.71 0.00 43.02 3.02
3177 3364 1.131883 GTAGCGTCTACGAAGGCTCAA 59.868 52.381 6.71 0.00 40.58 3.02
3178 3365 0.731417 GTAGCGTCTACGAAGGCTCA 59.269 55.000 6.71 0.00 40.58 4.26
3179 3366 0.731417 TGTAGCGTCTACGAAGGCTC 59.269 55.000 6.71 0.00 40.58 4.70
3180 3367 0.450983 GTGTAGCGTCTACGAAGGCT 59.549 55.000 6.71 0.00 42.58 4.58
3181 3368 0.525029 GGTGTAGCGTCTACGAAGGC 60.525 60.000 6.71 0.00 43.02 4.35
3182 3369 0.806868 TGGTGTAGCGTCTACGAAGG 59.193 55.000 6.71 0.00 43.02 3.46
3183 3370 1.736126 TCTGGTGTAGCGTCTACGAAG 59.264 52.381 6.71 8.67 43.02 3.79
3184 3371 1.812235 TCTGGTGTAGCGTCTACGAA 58.188 50.000 6.71 0.00 43.02 3.85
3185 3372 1.938577 GATCTGGTGTAGCGTCTACGA 59.061 52.381 6.71 4.55 43.02 3.43
3186 3373 1.002684 GGATCTGGTGTAGCGTCTACG 60.003 57.143 10.88 0.00 43.27 3.51
3187 3374 2.033550 CAGGATCTGGTGTAGCGTCTAC 59.966 54.545 9.27 9.27 0.00 2.59
3188 3375 2.298610 CAGGATCTGGTGTAGCGTCTA 58.701 52.381 0.00 0.00 0.00 2.59
3189 3376 1.107114 CAGGATCTGGTGTAGCGTCT 58.893 55.000 0.00 0.00 0.00 4.18
3190 3377 0.528684 GCAGGATCTGGTGTAGCGTC 60.529 60.000 0.00 0.00 31.21 5.19
3191 3378 0.972983 AGCAGGATCTGGTGTAGCGT 60.973 55.000 0.00 0.00 40.87 5.07
3192 3379 1.819229 AGCAGGATCTGGTGTAGCG 59.181 57.895 0.00 0.00 40.87 4.26
3198 3385 0.322277 CAACTGCAGCAGGATCTGGT 60.322 55.000 26.38 0.98 43.33 4.00
3199 3386 0.322277 ACAACTGCAGCAGGATCTGG 60.322 55.000 26.38 5.47 35.51 3.86
3200 3387 1.199327 CAACAACTGCAGCAGGATCTG 59.801 52.381 26.38 18.20 35.51 2.90
3201 3388 1.072806 TCAACAACTGCAGCAGGATCT 59.927 47.619 26.38 2.01 35.51 2.75
3202 3389 1.527034 TCAACAACTGCAGCAGGATC 58.473 50.000 26.38 0.00 35.51 3.36
3203 3390 1.816835 CATCAACAACTGCAGCAGGAT 59.183 47.619 26.38 15.17 35.51 3.24
3204 3391 1.241165 CATCAACAACTGCAGCAGGA 58.759 50.000 26.38 13.53 35.51 3.86
3205 3392 0.388134 GCATCAACAACTGCAGCAGG 60.388 55.000 26.38 12.00 38.28 4.85
3206 3393 0.312729 TGCATCAACAACTGCAGCAG 59.687 50.000 21.54 21.54 43.11 4.24
3207 3394 2.416901 TGCATCAACAACTGCAGCA 58.583 47.368 15.27 0.00 43.11 4.41
3210 3397 2.268762 TAGGTGCATCAACAACTGCA 57.731 45.000 0.00 0.00 45.60 4.41
3211 3398 3.313526 CCTATAGGTGCATCAACAACTGC 59.686 47.826 10.96 0.00 38.31 4.40
3224 3411 8.002638 CATCAGGAGATTCGAAACCTATAGGTG 61.003 44.444 25.25 12.90 39.06 4.00
3225 3412 6.015010 CATCAGGAGATTCGAAACCTATAGGT 60.015 42.308 19.27 19.27 40.83 3.08
3226 3413 6.393990 CATCAGGAGATTCGAAACCTATAGG 58.606 44.000 17.73 17.73 34.91 2.57
3227 3414 5.866633 GCATCAGGAGATTCGAAACCTATAG 59.133 44.000 17.24 12.26 30.20 1.31
3228 3415 5.304357 TGCATCAGGAGATTCGAAACCTATA 59.696 40.000 17.24 11.37 30.20 1.31
3229 3416 4.101585 TGCATCAGGAGATTCGAAACCTAT 59.898 41.667 17.24 10.90 30.20 2.57
3230 3417 3.450817 TGCATCAGGAGATTCGAAACCTA 59.549 43.478 17.24 9.62 30.20 3.08
3231 3418 2.237143 TGCATCAGGAGATTCGAAACCT 59.763 45.455 0.00 8.95 30.20 3.50
3232 3419 2.632377 TGCATCAGGAGATTCGAAACC 58.368 47.619 0.00 6.62 30.20 3.27
3233 3420 5.050499 CACTATGCATCAGGAGATTCGAAAC 60.050 44.000 0.19 0.00 30.20 2.78
3234 3421 5.052481 CACTATGCATCAGGAGATTCGAAA 58.948 41.667 0.19 0.00 30.20 3.46
3235 3422 4.342092 TCACTATGCATCAGGAGATTCGAA 59.658 41.667 0.19 0.00 30.20 3.71
3236 3423 3.891366 TCACTATGCATCAGGAGATTCGA 59.109 43.478 0.19 0.00 30.20 3.71
3237 3424 4.236147 CTCACTATGCATCAGGAGATTCG 58.764 47.826 0.19 0.00 30.20 3.34
3238 3425 4.282957 TCCTCACTATGCATCAGGAGATTC 59.717 45.833 18.00 0.00 30.20 2.52
3239 3426 4.229639 TCCTCACTATGCATCAGGAGATT 58.770 43.478 18.00 0.00 30.20 2.40
3240 3427 3.854437 TCCTCACTATGCATCAGGAGAT 58.146 45.455 18.00 0.00 33.87 2.75
3241 3428 3.319031 TCCTCACTATGCATCAGGAGA 57.681 47.619 18.00 8.03 0.00 3.71
3242 3429 3.244146 CCTTCCTCACTATGCATCAGGAG 60.244 52.174 0.19 8.41 34.68 3.69
3243 3430 2.702478 CCTTCCTCACTATGCATCAGGA 59.298 50.000 0.19 7.49 0.00 3.86
3244 3431 2.809665 GCCTTCCTCACTATGCATCAGG 60.810 54.545 0.19 4.99 0.00 3.86
3245 3432 2.158856 TGCCTTCCTCACTATGCATCAG 60.159 50.000 0.19 1.88 0.00 2.90
3246 3433 1.839354 TGCCTTCCTCACTATGCATCA 59.161 47.619 0.19 0.00 0.00 3.07
3247 3434 2.492012 CTGCCTTCCTCACTATGCATC 58.508 52.381 0.19 0.00 0.00 3.91
3248 3435 1.476471 GCTGCCTTCCTCACTATGCAT 60.476 52.381 3.79 3.79 0.00 3.96
3249 3436 0.107508 GCTGCCTTCCTCACTATGCA 60.108 55.000 0.00 0.00 0.00 3.96
3250 3437 0.817229 GGCTGCCTTCCTCACTATGC 60.817 60.000 12.43 0.00 0.00 3.14
3251 3438 0.179034 GGGCTGCCTTCCTCACTATG 60.179 60.000 19.68 0.00 0.00 2.23
3252 3439 0.327000 AGGGCTGCCTTCCTCACTAT 60.327 55.000 19.68 0.00 0.00 2.12
3253 3440 1.081092 AGGGCTGCCTTCCTCACTA 59.919 57.895 19.68 0.00 0.00 2.74
3254 3441 2.204059 AGGGCTGCCTTCCTCACT 60.204 61.111 19.68 1.73 0.00 3.41
3255 3442 2.045536 CAGGGCTGCCTTCCTCAC 60.046 66.667 19.68 0.00 0.00 3.51
3256 3443 3.333219 CCAGGGCTGCCTTCCTCA 61.333 66.667 19.68 0.00 0.00 3.86
3257 3444 2.911926 AACCAGGGCTGCCTTCCTC 61.912 63.158 19.68 0.61 0.00 3.71
3258 3445 2.860971 AACCAGGGCTGCCTTCCT 60.861 61.111 19.68 4.18 0.00 3.36
3259 3446 2.677875 CAACCAGGGCTGCCTTCC 60.678 66.667 19.68 1.45 0.00 3.46
3260 3447 1.973812 GACAACCAGGGCTGCCTTC 60.974 63.158 19.68 2.28 0.00 3.46
3261 3448 2.116125 GACAACCAGGGCTGCCTT 59.884 61.111 19.68 8.39 0.00 4.35
3262 3449 4.335647 CGACAACCAGGGCTGCCT 62.336 66.667 19.68 1.35 0.00 4.75
3264 3451 2.741486 TTACCGACAACCAGGGCTGC 62.741 60.000 0.00 0.00 0.00 5.25
3265 3452 0.953960 GTTACCGACAACCAGGGCTG 60.954 60.000 0.00 0.00 0.00 4.85
3266 3453 1.125711 AGTTACCGACAACCAGGGCT 61.126 55.000 0.00 0.00 0.00 5.19
3267 3454 0.953960 CAGTTACCGACAACCAGGGC 60.954 60.000 0.00 0.00 0.00 5.19
3268 3455 0.321298 CCAGTTACCGACAACCAGGG 60.321 60.000 0.00 0.00 0.00 4.45
3269 3456 0.395312 ACCAGTTACCGACAACCAGG 59.605 55.000 0.00 0.00 32.92 4.45
3270 3457 1.069513 TCACCAGTTACCGACAACCAG 59.930 52.381 0.00 0.00 0.00 4.00
3271 3458 1.121378 TCACCAGTTACCGACAACCA 58.879 50.000 0.00 0.00 0.00 3.67
3272 3459 2.467566 ATCACCAGTTACCGACAACC 57.532 50.000 0.00 0.00 0.00 3.77
3273 3460 4.992951 AGTTAATCACCAGTTACCGACAAC 59.007 41.667 0.00 0.00 0.00 3.32
3274 3461 5.217978 AGTTAATCACCAGTTACCGACAA 57.782 39.130 0.00 0.00 0.00 3.18
3275 3462 4.877378 AGTTAATCACCAGTTACCGACA 57.123 40.909 0.00 0.00 0.00 4.35
3276 3463 4.390909 CCAAGTTAATCACCAGTTACCGAC 59.609 45.833 0.00 0.00 0.00 4.79
3277 3464 4.571919 CCAAGTTAATCACCAGTTACCGA 58.428 43.478 0.00 0.00 0.00 4.69
3278 3465 3.126343 GCCAAGTTAATCACCAGTTACCG 59.874 47.826 0.00 0.00 0.00 4.02
3279 3466 3.442625 GGCCAAGTTAATCACCAGTTACC 59.557 47.826 0.00 0.00 0.00 2.85
3280 3467 4.076394 TGGCCAAGTTAATCACCAGTTAC 58.924 43.478 0.61 0.00 0.00 2.50
3281 3468 4.374689 TGGCCAAGTTAATCACCAGTTA 57.625 40.909 0.61 0.00 0.00 2.24
3282 3469 3.237268 TGGCCAAGTTAATCACCAGTT 57.763 42.857 0.61 0.00 0.00 3.16
3283 3470 2.969821 TGGCCAAGTTAATCACCAGT 57.030 45.000 0.61 0.00 0.00 4.00
3284 3471 3.420893 TCTTGGCCAAGTTAATCACCAG 58.579 45.455 37.97 15.09 39.38 4.00
3285 3472 3.420893 CTCTTGGCCAAGTTAATCACCA 58.579 45.455 37.97 19.09 39.38 4.17
3286 3473 2.755103 CCTCTTGGCCAAGTTAATCACC 59.245 50.000 37.97 0.00 39.38 4.02
3287 3474 3.686016 TCCTCTTGGCCAAGTTAATCAC 58.314 45.455 37.97 0.00 39.38 3.06
3288 3475 4.526970 GATCCTCTTGGCCAAGTTAATCA 58.473 43.478 37.97 21.12 39.38 2.57
3289 3476 3.885901 GGATCCTCTTGGCCAAGTTAATC 59.114 47.826 37.97 32.54 39.38 1.75
3290 3477 3.529319 AGGATCCTCTTGGCCAAGTTAAT 59.471 43.478 37.97 28.69 39.38 1.40
3291 3478 2.919602 AGGATCCTCTTGGCCAAGTTAA 59.080 45.455 37.97 25.95 39.38 2.01
3292 3479 2.239654 CAGGATCCTCTTGGCCAAGTTA 59.760 50.000 37.97 26.29 39.38 2.24
3293 3480 1.005215 CAGGATCCTCTTGGCCAAGTT 59.995 52.381 37.97 23.87 39.38 2.66
3294 3481 0.622665 CAGGATCCTCTTGGCCAAGT 59.377 55.000 37.97 23.52 39.38 3.16
3295 3482 0.750911 GCAGGATCCTCTTGGCCAAG 60.751 60.000 35.52 35.52 39.71 3.61
3296 3483 1.210204 AGCAGGATCCTCTTGGCCAA 61.210 55.000 19.25 19.25 0.00 4.52
3297 3484 1.210204 AAGCAGGATCCTCTTGGCCA 61.210 55.000 12.69 0.00 0.00 5.36
3298 3485 0.750911 CAAGCAGGATCCTCTTGGCC 60.751 60.000 28.63 0.00 34.98 5.36
3299 3486 0.034670 ACAAGCAGGATCCTCTTGGC 60.035 55.000 33.62 25.85 40.93 4.52
3300 3487 3.634397 TTACAAGCAGGATCCTCTTGG 57.366 47.619 33.62 23.98 40.93 3.61
3301 3488 6.528321 TCATATTACAAGCAGGATCCTCTTG 58.472 40.000 31.48 31.48 41.99 3.02
3302 3489 6.753913 TCATATTACAAGCAGGATCCTCTT 57.246 37.500 12.69 15.07 0.00 2.85
3303 3490 6.949117 ATCATATTACAAGCAGGATCCTCT 57.051 37.500 12.69 9.57 0.00 3.69
3304 3491 7.164122 TGAATCATATTACAAGCAGGATCCTC 58.836 38.462 12.69 7.20 0.00 3.71
3305 3492 7.083062 TGAATCATATTACAAGCAGGATCCT 57.917 36.000 9.02 9.02 0.00 3.24
3306 3493 6.128063 GCTGAATCATATTACAAGCAGGATCC 60.128 42.308 2.48 2.48 0.00 3.36
3307 3494 6.401903 CGCTGAATCATATTACAAGCAGGATC 60.402 42.308 0.00 0.00 0.00 3.36
3308 3495 5.410746 CGCTGAATCATATTACAAGCAGGAT 59.589 40.000 0.00 0.00 0.00 3.24
3309 3496 4.751600 CGCTGAATCATATTACAAGCAGGA 59.248 41.667 0.00 0.00 0.00 3.86
3310 3497 4.512944 ACGCTGAATCATATTACAAGCAGG 59.487 41.667 0.00 0.00 0.00 4.85
3311 3498 5.234972 TGACGCTGAATCATATTACAAGCAG 59.765 40.000 0.00 0.00 0.00 4.24
3312 3499 5.115480 TGACGCTGAATCATATTACAAGCA 58.885 37.500 0.00 0.00 0.00 3.91
3313 3500 5.657470 TGACGCTGAATCATATTACAAGC 57.343 39.130 0.00 0.00 0.00 4.01
3314 3501 7.426456 GTGTTTGACGCTGAATCATATTACAAG 59.574 37.037 0.00 0.00 0.00 3.16
3315 3502 7.119116 AGTGTTTGACGCTGAATCATATTACAA 59.881 33.333 0.00 0.00 37.59 2.41
3316 3503 6.593770 AGTGTTTGACGCTGAATCATATTACA 59.406 34.615 0.00 0.00 37.59 2.41
3317 3504 7.005062 AGTGTTTGACGCTGAATCATATTAC 57.995 36.000 0.00 0.00 37.59 1.89
3333 3520 4.621991 GAGCAGTAAGAGTCAGTGTTTGA 58.378 43.478 0.00 0.00 0.00 2.69
3334 3521 3.426859 CGAGCAGTAAGAGTCAGTGTTTG 59.573 47.826 0.00 0.00 0.00 2.93
3335 3522 3.643763 CGAGCAGTAAGAGTCAGTGTTT 58.356 45.455 0.00 0.00 0.00 2.83
3336 3523 2.608261 GCGAGCAGTAAGAGTCAGTGTT 60.608 50.000 0.00 0.00 0.00 3.32
3337 3524 1.068194 GCGAGCAGTAAGAGTCAGTGT 60.068 52.381 0.00 0.00 0.00 3.55
3338 3525 1.201181 AGCGAGCAGTAAGAGTCAGTG 59.799 52.381 0.00 0.00 0.00 3.66
3339 3526 1.470890 GAGCGAGCAGTAAGAGTCAGT 59.529 52.381 0.00 0.00 0.00 3.41
3340 3527 1.742831 AGAGCGAGCAGTAAGAGTCAG 59.257 52.381 0.00 0.00 0.00 3.51
3341 3528 1.740585 GAGAGCGAGCAGTAAGAGTCA 59.259 52.381 0.00 0.00 0.00 3.41
3342 3529 1.740585 TGAGAGCGAGCAGTAAGAGTC 59.259 52.381 0.00 0.00 0.00 3.36
3343 3530 1.827681 TGAGAGCGAGCAGTAAGAGT 58.172 50.000 0.00 0.00 0.00 3.24
3344 3531 2.929531 TTGAGAGCGAGCAGTAAGAG 57.070 50.000 0.00 0.00 0.00 2.85
3345 3532 2.755103 TCATTGAGAGCGAGCAGTAAGA 59.245 45.455 0.00 0.00 0.00 2.10
3346 3533 3.156511 TCATTGAGAGCGAGCAGTAAG 57.843 47.619 0.00 0.00 0.00 2.34
3347 3534 3.131046 TGATCATTGAGAGCGAGCAGTAA 59.869 43.478 0.00 0.00 34.70 2.24
3348 3535 2.689983 TGATCATTGAGAGCGAGCAGTA 59.310 45.455 0.00 0.00 34.70 2.74
3349 3536 1.479730 TGATCATTGAGAGCGAGCAGT 59.520 47.619 0.00 0.00 34.70 4.40
3350 3537 2.220479 TGATCATTGAGAGCGAGCAG 57.780 50.000 0.00 0.00 34.70 4.24
3351 3538 2.159000 ACATGATCATTGAGAGCGAGCA 60.159 45.455 5.16 0.00 34.70 4.26
3352 3539 2.481854 ACATGATCATTGAGAGCGAGC 58.518 47.619 5.16 0.00 34.70 5.03
3353 3540 3.869832 ACAACATGATCATTGAGAGCGAG 59.130 43.478 14.50 0.00 34.70 5.03
3354 3541 3.619929 CACAACATGATCATTGAGAGCGA 59.380 43.478 14.50 0.00 34.70 4.93
3355 3542 3.787805 GCACAACATGATCATTGAGAGCG 60.788 47.826 14.50 1.32 34.70 5.03
3356 3543 3.128068 TGCACAACATGATCATTGAGAGC 59.872 43.478 14.50 12.40 0.00 4.09
3357 3544 4.957759 TGCACAACATGATCATTGAGAG 57.042 40.909 14.50 2.66 0.00 3.20
3358 3545 5.005094 TCTTGCACAACATGATCATTGAGA 58.995 37.500 14.50 5.41 0.00 3.27
3359 3546 5.305139 TCTTGCACAACATGATCATTGAG 57.695 39.130 14.50 8.62 0.00 3.02
3360 3547 5.416326 TCATCTTGCACAACATGATCATTGA 59.584 36.000 14.50 5.36 40.26 2.57
3361 3548 5.515270 GTCATCTTGCACAACATGATCATTG 59.485 40.000 5.16 6.48 40.26 2.82
3362 3549 5.184287 TGTCATCTTGCACAACATGATCATT 59.816 36.000 5.16 0.00 40.26 2.57
3363 3550 4.703093 TGTCATCTTGCACAACATGATCAT 59.297 37.500 1.18 1.18 40.26 2.45
3364 3551 4.073549 TGTCATCTTGCACAACATGATCA 58.926 39.130 0.00 0.00 40.26 2.92
3365 3552 4.083164 TGTGTCATCTTGCACAACATGATC 60.083 41.667 0.00 3.48 41.89 2.92
3366 3553 3.822167 TGTGTCATCTTGCACAACATGAT 59.178 39.130 0.00 0.00 41.89 2.45
3367 3554 3.212685 TGTGTCATCTTGCACAACATGA 58.787 40.909 0.00 0.00 41.89 3.07
3368 3555 3.629438 TGTGTCATCTTGCACAACATG 57.371 42.857 0.00 0.00 41.89 3.21
3369 3556 3.884693 TCTTGTGTCATCTTGCACAACAT 59.115 39.130 6.07 0.00 46.58 2.71
3370 3557 3.277715 TCTTGTGTCATCTTGCACAACA 58.722 40.909 6.07 0.00 46.58 3.33
3371 3558 3.969117 TCTTGTGTCATCTTGCACAAC 57.031 42.857 6.07 0.00 46.58 3.32
3373 3560 3.544684 ACTTCTTGTGTCATCTTGCACA 58.455 40.909 0.00 0.00 42.95 4.57
3374 3561 3.561310 TGACTTCTTGTGTCATCTTGCAC 59.439 43.478 0.00 0.00 39.23 4.57
3375 3562 3.807553 TGACTTCTTGTGTCATCTTGCA 58.192 40.909 0.00 0.00 39.23 4.08
3382 3569 4.323028 GGGAGATCATGACTTCTTGTGTCA 60.323 45.833 0.00 0.00 46.58 3.58
3383 3570 4.187694 GGGAGATCATGACTTCTTGTGTC 58.812 47.826 0.00 0.00 35.21 3.67
3384 3571 3.584406 TGGGAGATCATGACTTCTTGTGT 59.416 43.478 0.00 0.00 0.00 3.72
3385 3572 3.937706 GTGGGAGATCATGACTTCTTGTG 59.062 47.826 0.00 0.00 0.00 3.33
3386 3573 3.584406 TGTGGGAGATCATGACTTCTTGT 59.416 43.478 0.00 0.00 0.00 3.16
3387 3574 4.212143 TGTGGGAGATCATGACTTCTTG 57.788 45.455 0.00 0.00 0.00 3.02
3388 3575 5.447778 AATGTGGGAGATCATGACTTCTT 57.552 39.130 0.00 0.00 0.00 2.52
3389 3576 5.045359 TCAAATGTGGGAGATCATGACTTCT 60.045 40.000 0.00 0.00 0.00 2.85
3390 3577 5.188434 TCAAATGTGGGAGATCATGACTTC 58.812 41.667 0.00 0.00 0.00 3.01
3391 3578 5.183530 TCAAATGTGGGAGATCATGACTT 57.816 39.130 0.00 0.00 0.00 3.01
3392 3579 4.849813 TCAAATGTGGGAGATCATGACT 57.150 40.909 0.00 0.00 0.00 3.41
3393 3580 5.374921 AGATCAAATGTGGGAGATCATGAC 58.625 41.667 0.00 0.00 39.39 3.06
3394 3581 5.641789 AGATCAAATGTGGGAGATCATGA 57.358 39.130 0.00 0.00 39.39 3.07
3395 3582 6.512903 CGAAAGATCAAATGTGGGAGATCATG 60.513 42.308 0.00 0.00 39.39 3.07
3396 3583 5.530171 CGAAAGATCAAATGTGGGAGATCAT 59.470 40.000 0.00 0.00 39.39 2.45
3397 3584 4.877823 CGAAAGATCAAATGTGGGAGATCA 59.122 41.667 0.00 0.00 39.39 2.92
3398 3585 5.007136 GTCGAAAGATCAAATGTGGGAGATC 59.993 44.000 0.00 0.00 45.19 2.75
3399 3586 4.878397 GTCGAAAGATCAAATGTGGGAGAT 59.122 41.667 0.00 0.00 45.19 2.75
3400 3587 4.253685 GTCGAAAGATCAAATGTGGGAGA 58.746 43.478 0.00 0.00 45.19 3.71
3401 3588 3.375299 GGTCGAAAGATCAAATGTGGGAG 59.625 47.826 0.00 0.00 45.19 4.30
3402 3589 3.343617 GGTCGAAAGATCAAATGTGGGA 58.656 45.455 0.00 0.00 45.19 4.37
3403 3590 3.764885 GGTCGAAAGATCAAATGTGGG 57.235 47.619 0.00 0.00 45.19 4.61
3412 3599 2.737039 GCTCAGACCTGGTCGAAAGATC 60.737 54.545 20.49 9.69 45.19 2.75
3413 3600 1.205893 GCTCAGACCTGGTCGAAAGAT 59.794 52.381 20.49 0.00 45.19 2.40
3414 3601 0.603569 GCTCAGACCTGGTCGAAAGA 59.396 55.000 20.49 15.34 37.67 2.52
3415 3602 0.734253 CGCTCAGACCTGGTCGAAAG 60.734 60.000 20.49 18.31 37.67 2.62
3416 3603 1.289066 CGCTCAGACCTGGTCGAAA 59.711 57.895 20.49 9.51 37.67 3.46
3417 3604 2.636412 CCGCTCAGACCTGGTCGAA 61.636 63.158 20.49 11.89 37.67 3.71
3418 3605 3.062466 CCGCTCAGACCTGGTCGA 61.062 66.667 20.49 18.19 37.67 4.20
3419 3606 4.135153 CCCGCTCAGACCTGGTCG 62.135 72.222 20.49 15.20 37.67 4.79
3420 3607 1.255667 TAACCCGCTCAGACCTGGTC 61.256 60.000 19.20 19.20 0.00 4.02
3421 3608 1.229082 TAACCCGCTCAGACCTGGT 60.229 57.895 0.00 0.00 0.00 4.00
3422 3609 1.218316 GTAACCCGCTCAGACCTGG 59.782 63.158 0.00 0.00 0.00 4.45
3423 3610 0.108615 CAGTAACCCGCTCAGACCTG 60.109 60.000 0.00 0.00 0.00 4.00
3424 3611 1.258445 CCAGTAACCCGCTCAGACCT 61.258 60.000 0.00 0.00 0.00 3.85
3425 3612 1.218316 CCAGTAACCCGCTCAGACC 59.782 63.158 0.00 0.00 0.00 3.85
3426 3613 0.108756 GTCCAGTAACCCGCTCAGAC 60.109 60.000 0.00 0.00 0.00 3.51
3427 3614 0.541063 TGTCCAGTAACCCGCTCAGA 60.541 55.000 0.00 0.00 0.00 3.27
3428 3615 0.320374 TTGTCCAGTAACCCGCTCAG 59.680 55.000 0.00 0.00 0.00 3.35
3429 3616 2.443168 TTGTCCAGTAACCCGCTCA 58.557 52.632 0.00 0.00 0.00 4.26


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.