>input_sequence_51296
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------ATGGGTCGCGTGATCCGCGCTCAGCGTAAGGGTGCGGGCTCCGTCTTCAAGTCCCACACCCACCACCGCAAGGG
CCCCGCCCGCTTCAGGTCGCTCGACTTCGGCGAGCGCAACGGGTACCTCAAGGGCGTCGTCACCGATGTCATCCACGACC
CGGGGCGTGGTGCGCCGCTGGCCAAGGTGACCTTCCGCCACCCGTTCAGGTACAAGCACCAGAAGGAGCTCTTCGTCGCC
GCCGAGGGTATGTACACCGGCCAGTTCGTCTACTGCGGACGCCGCGCCACCCTCTCCGTTGGTAACGTCCTCCCGCTCCG
CTCCGTGCCTGAGGGAGGCGTCATCTGCAACGTCGAGCACCACGTCGGCGACCGTGGTGTCTTCGCCAGGGCCTCCGGTG
ACTACGCCATCGTCATCAGCCACAACCCTGACAACGGCACCTCAAGGTACTGTTACCTTTCCTCTCACCCCTCTATCTAA
A-GTA---CATGACCATGGTTAGAGCTGACGTTCTCCTGGTAGTAACTGTCACTAGATTTTATGTATGTGATTTGCTGTA
GGAAATGATTAAATGCTCATAGTTTGATCTGAATATATGTTCGTTCACTGCTTCTC--ATGGGTGATTTAGATGCTCTTT
AATTGATTAAAGATTGGAAACCTTAAATGTGTGTGCTTCATATGCTTGTTAATCTATCAAAGACAAATTCTTAGGAACTC
ATTCTGTCGTTGAGCCTTGAGATGTCTCCTGTTCATTGTATAATCTGCAGCTGTTACCATATGCT---------------
----------------------TGCTCTTCTGTTAACCTAGAATTGTACATGATATGCTTTCTTCTGTTATCCTTGAACT
TGTCATGATATGCTTTATCTTCTGTTATCTT-GTT-----------------------------------------AGAC
ATGTGATCTCTAACTATATTATCCTGCTTCTGTCTTCAGATTGGCTTACCGTGCTTT---AAGAATTATGATCACTAGCG
TTTACATATACGTGGACCATTTCTTGTTATCATTTCCTTGTCAGTACGAGATCATAT-----------------------
-GTGTATCTTTGGTTATGTTGCCTGATGGACTGATGCTTTTGATGAATTCTTCTGCTGTACAAATATTTAGACACAGTTA
CTCATGTTCTGTTTATGCAGGATCAAGCTCCCCTCTGGTGCCAAGAAGATTGTCCCAAGCAGCTGCCGTGCCATGATTGG
TCAGGTTGCTGGTGGTGGCAGGACTGAGAAGCCAATGCTCAAGGCTGGTAACGCCTACCACAAGTACCGCGTGAAGAGGA
ACTCCTGGCCTAAGGTGCGTGGTGTGGCCATGAACCCTGTGGAGCATCCCCACGGAGGAGGTAACCACCAGCATATTGGT
CACGCTTCCACTGTCCGCCGTGATGCACCACCTGGCCAGAAGGTTGGTCTCATCGCTGCCAGGAGGACTGGTCGTCTCAG
AGGCCAGGCTGCCGCCTCTGCTGCCAAGGCCGACAAGGCCACTTAG----------------------------------
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----------------------------------
>chr5A_1_TraesCS5A01G082800
GTGACATGTGCTGTGAAGAATGATCATAAGAACATTATCATAAATTAATAGTATATGGGGTAGTCTTTATATAAAGAAAG
AAAGAAAATCGAAAGTGTTTTTTTGCTCCCGAGCTTAAATGAACTG-------GGATGAACAGTAAAATCAAAAGAAAAA
AAATGATTTC---------TTTTTGTGGTAACCTTTAACAAATGTTTTCTATGCTTGAAA--TTTTTGTCACGAAATGAC
TTTCGTGGAAGTCATGGCAAAAAAATAATTAAAAA-AGTACTCCAAAATGCTTTCAAAAATAGCATTTTTGAAGTATTGA
TTTTGTCTTTTTTGCCACGACTTCCAGAAATGTTCATTCATGATAATTTTTTGCAAGCACATAGTACATTTGTCAAAGGT
TACAAAAAAATCGGA---------TAATTTATTTTACTATCTTTCCTGGTTTTACTGTTCACAAAAAGCATTTGAGCTCG
TGTGCAAATTCTTCACGTCCAAAGAAAATTATGTTCTTCAACATCTGCCTTCTCCATTGGTCGACCTTCTTCTCGTCCCG
TAGCACAAAAA---GGCGCGCTCCAGCTCGCTCGCCGCTCCCAACACCACAAC-----------TTTTGTTTTTTTGAGA
ATCCCCAACACCACAACTTTTTGATCACTTCAAACGGGCGGAGCCAGAATGGTACAAAGAGAACTCGGCCTATTACCAGC
CCATTTCTCATTCCCACTAGTCCACTACACTAACAAACCGGCCCATTACAGCCCAGTCCACTCCTCATTTCGTCAGTCCC
TCACAGCACGGCCCGGCGACGCTATGTCACTGACGTTGTGGTCCTACTGCCTGCCCAAACGAATCCAACGGCCGAGACGC
GCCCC-ATCCTCCATCCCGACCGTCCACCCTATAGGGTAATCAAACCACAAAGCCCGTGCCGCACCCTATATATTGCTCC
CTCTTCCTCCTGGTCGAACCCTAGCCCAGCTGCCCACCCATTCCCCTC---GCCGCCGCCGCCACTCCGCCGCCGCCGCC
GCCGAGATGGGTCGCGTGATCCGCGCTCAGCGTAAGGGTGCGGGCTCCGTCTTCAAGTCCCACACCCACCACCGCAAGGG
CCCCGCCCGCTTCAGGTCGCTCGACTTCGGCGAGCGCAACGGGTACCTCAAGGGCGTCGTCACCGATGTCATCCACGACC
CGGGGCGTGGTGCGCCGCTGGCCAAGGTGACCTTCCGCCACCCGTTCAGGTACAAGCACCAGAAGGAGCTCTTCGTCGCC
GCCGAGGGTATGTACACCGGCCAGTTCGTCTACTGCGGACGCCGCGCCACCCTCTCCGTTGGTAACGTCCTCCCGCTCCG
CTCCGTGCCTGAGGGAGGCGTCATCTGCAACGTCGAGCACCACGTCGGCGACCGTGGTGTCTTCGCCAGGGCCTCCGGTG
ACTACGCCATCGTCATCAGCCACAACCCTGACAACGGCACCTCAAGGTACTGTTACCTTTCCTCTCACCCCTCTATCTAA
A-GTA---CATGACCATGGTTAGAGCTGACGTTCTCCTGGTAGTAACTGTCACTAGATTTTATGTATGTGATTTGCTGTA
GGAAATGATTAAATGCTCATAGTTTGATCTGAATATATGTTCGTTCACTGCTTCTC--ATGGGTGATTTAGATGCTCTTT
AATTGATTAAAGATTGGAAACCTTAAATGTGTGTGCTTCATATGCTTGTTAATCTATCAAAGACAAATTCTTAGGAACTC
ATTCTGTCGTTGAGCCTTGAGATGTCTCCTGTTCATTGTATAATCTGCAGCTGTTACCATATGCT---------------
----------------------TGCTCTTCTGTTAACCTAGAATTGTACATGATATGCTTTCTTCTGTTATCCTTGAACT
TGTCATGATATGCTTTATCTTCTGTTATCTT-GTT-----------------------------------------AGAC
ATGTGATCTCTAACTATATTATCCTGCTTCTGTCTTCAGATTGGCTTACCGTGCTTT---AAGAATTATGATCACTAGCG
TTTACATATACGTGGACCATTTCTTGTTATCATTTCCTTGTCAGTACGAGATCATAT-----------------------
-GTGTATCTTTGGTTATGTTGCCTGATGGACTGATGCTTTTGATGAATTCTTCTGCTGTACAAATATTTAGACACAGTTA
CTCATGTTCTGTTTATGCAGGATCAAGCTCCCCTCTGGTGCCAAGAAGATTGTCCCAAGCAGCTGCCGTGCCATGATTGG
TCAGGTTGCTGGTGGTGGCAGGACTGAGAAGCCAATGCTCAAGGCTGGTAACGCCTACCACAAGTACCGCGTGAAGAGGA
ACTCCTGGCCTAAGGTGCGTGGTGTGGCCATGAACCCTGTGGAGCATCCCCACGGAGGAGGTAACCACCAGCATATTGGT
CACGCTTCCACTGTCCGCCGTGATGCACCACCTGGCCAGAAGGTTGGTCTCATCGCTGCCAGGAGGACTGGTCGTCTCAG
AGGCCAGGCTGCCGCCTCTGCTGCCAAGGCCGACAAGGCCACTTAGAGCTATCGTTGCTGTTTATCTATGTTTGCTGCCT
CTAGATTACCCGTCAAGGACATGTATTGCAATATGGATGTCGTTTTTGCTCGGTACTTTGGTAACGTGGTGATATTTGTT
ATCAGTTTTCGCTGTCGTGGTCTGGATTCGTCGGTCCACATAAAGAAGATTGT---GCTTGGATATTTGTTTGTCGAGTT
GCTTGAGTTTGCCCCTGGCGCATATTTTTGTTTATTGTTTCTGTTTTAGTTTAGCTCTATTGCTGGAGCTCTAAACGTAG
TTTTGTTTGGTCGAGTCAAACAGGAGG-------ATGTTTGCTATTATCTCGTGGTTCTTTGGAATTTTAACCCAATGGG
T------------------GATGCATATATAAATATACCTGCTTTTTACATCGCTTACCCAAAATCACCCGTCCAGCAAA
CTGAGGTAAATGTAAATTTGTTCTGAGAACGTGGTGATGTAAAACGGCCGCCCACCGTGCGAACGCCAACTGCCTCTATG
TACTTAGAGCATAGTGTAAATTTGAAAATTCAGGGTGGGCCGATCGGGTTCCTAGGCGTCGATTTCGGTTCTTTCGGCGC
AAACTGGCCCATTTTTTAACCAGTTTCGGTCGAAATTGACCCACCATTGGCGTTGATTGATAAATTTTGGCCCATAGTGT
AAATTCAACATAAGCTATTTCTTTATCACATAATTCATCATAGAAAATCAATAAAAATTAAATAGTTCAACAAAGCGTTG
TCCTTGAGCCTTCGTAGACGCTACACCAGATCCTGCTGCAGTTGTTGATGCACCTATAGGTTTCGAATCTCCTGATGCAT
AGTGAGGAAGGCAGCCCTGGTTGTCGGTAACTGGTGATTAACTTGGCCAAGAGGATCCTGCTTGTAATATGATTCAGCGT
CAAACACTGACTCTTACTGCTCGCTCTCAATGATCATGTTGTGCAAGATGACACAAGAAGTCATGATCTCCCACATTTGA
TCTTTCGACCAGGTCTGAGCGGGTTACTGGACAA
>chr5B_1
GTGACATGTGCTGTGAAGAATGATTTTAAGAACATTATCATAAATTAATAGTATATGGGATGGCGTTTATATAAAGAAAG
AAAAT-----GAAAATGTTCTTCTACTCCTGAGTTCAAATGAGCTCGGACCTCGGATGAACAATGAAATCGAATGAAAAT
AAAAAAAAAATCTGATTATTTTGTGTGGTAACCTTTGACAAAAAATTTCTATGCTTGAATTTTTTTTGCCACGAAATGAC
ATTTGTGGAAGTCATGGCAAAAAATAAAACAAAATCAGTACTCCAAAATGATTCCAAAAATAGCATTTTTGGAGTATCAA
CTTTATATTTTTTT-CACGACTTCCAGAAATTTTCATTCATGATAAATTTTTGTACGCACATAG-ACATTTGTCAAAGGA
TATCACAAAAAATATCAGAATTTTTAATCCTTTTAACTATATTTTTTGATTTCACTGTTCATCATAAGCATTTGACCTCG
GGTGCAAATACTTCCC-------------------------------------------GTCCAAATACTTCTCGTCCCG
TGGCACAAAAAAA-GGCGCGCTCCTGCTCGCTCACCGCTCCCAACACCACAACCG-------------------------
-------TCTTCGGGG---TTTGATCACTTCGAACGGGCGGAGCCAGAATGATAT---------TCGGCCTGTTACCAGC
TCATTTCTCATTCCCACA--------ACACTAACAAGCTGGCCCATGACAGCCCAGTT----------------AGTCCG
TCACAGCACGGCCCGGCGACGCTATTTCACTGACGTTGCGGTCCTACTGCGTGACCAAACGAATCCAACGGCCCAGACGC
GCCCCCATCCCCCATCCCGACCGTCCACCCTATAGGGTAATCAAACCACAAAGCCCGTGCCGCACCCTATATATTGCTCC
CTCTTCCTCCTCGTCGAACCCTAGCCCAGCTGCCCACCCATTCCCCTCACCGCCGCCGCCGCCACTGCGCCGCTGCCGCC
GCCGAGATGGGTCGCGTGATCCGCGCTCAGCGTAAGGGTGCGGGCTCCGTCTTCAAGTCCCACACCCACCACCGCAAGGG
CCCCGCCCGGTTCAGGTCGCTCGACTTCGGCGAGCGCAACGGGTACCTCAAGGGCGTCGTCACCGATGTCATCCACGACC
CGGGGCGTGGTGCGCCGCTGGCCAAGGTGACCTTCCGCCACCCGTTCAGGTACAAGCACCAGAAGGAGCTCTTCGTCGCC
GCCGAGGGTATGTACACCGGCCAGTTCGTCTACTGCGGACGCCGCGCCACCCTCTCCGTCGGCAACGTCCTCCCGCTCCG
CTCCGTTCCTGAGGGAGGCGTCATCTGCAACGTCGAGCACCACGTCGGCGACCGCGGTGTCTTCGCCAGGGCATCCGGTG
ACTACGCCATCGTCATCAGCCACAACCCCGACAACGGCACCTCAAGGTACTGTTCCCTTTCCTCTCAACCCTCTCTCTAA
A-GTA---CATGACTATGGTTAGATCTGACGTTCTCCTGCTAGTAACTGTCATTAGATTTGATGTATGTGATTCGCGGTA
GGAAATGATTAAATGCTCATAGTTCGATCTGAATATATGTTCGTTCACTGCTTCTGATATGTGTGATTTAGATACTCTTT
AATTGATTAGAA----------------------GCGTCATATGTTTGTTAATCTATCAAAGACAAATTCGTAGGAACTC
ATTCTGTCTTTGAGCCTTGAAATGTCTCCTGTTCATCTTATAATCTACAACTGTTACGATATGCT---------------
----------------------TGCTCTTCTGTTATCCTAGAACTGTACACGATATGCTTTCTTCTGTTAACTTTGAACT
TGGCATGACATGCTTTCTCTTCTGTTATCTT-GAACTGGACATGCATCTTGTAATTCTGTAAACATT--AAACCAGAGAC
ATGCGATCTCTAACTGTATTATCCTGCTTCTGTCTTCAGATTGGCCTACTGTGCTTT---AAGAATTATGATCACTAGCG
TTTACTTAGATGTGGACCATTTCTTACTATCAGTT-CTTGTCAGTACAAGATCATAT-----------------------
-GTGTATCTTCGGTTATTTTGCCCGATGGCCTCATGCTTTTGATGAATTCTTCAGCTGTACAAATATCTGTACACAGTTA
CTCATTTTCTGTTTATGTAGGATCAAGCTCCCCTCTGGTGCCAAGAAGATTGTCCCAAGCAGCTGCCGTGCCATGATTGG
TCAGGTTGCTGGTGGTGGCAGGACTGAGAAGCCAATGCTCAAGGCTGGTAACGCCTACCACAAGTACCGTGTGAAGAGGA
ACTCGTGGCCTAAGGTGCGTGGTGTGGCCATGAACCCTGTGGAGCATCCCCACGGAGGAGGTAACCACCAGCATATTGGT
CACGCTTCCACTGTCCGCCGTGATGCACCACCTGGCCAGAAGGTTGGTCTCATCGCTGCTAGGAGGACTGGTCGTCTCAG
AGGCCAGGCTGCCGCCTCTGCTGCCAAGGCCGACAAGGCCACTTAGAGCTATCATTGCTGTTTATCTATGGTTGCTGCCT
CTAGATTACCTGTCAAGGACATGTATTGCAGTATGGATGTCGTTTTTGCTCGGTACTTTGGTAACCTGGTGATGTTTGTT
ATCAGTTTTCGCTGTCGTGGTCTGGATTCTTCGGTCCACATAAAGAAGATTAT---GCTTGGATATTTGGTTGTCCAGTT
ACTTGAGTTAGCCCCTGGTGCTTATTTTTGTTTATTGTTTCTGTTTTAGTTTAGCTCTATTGGTGGATCTATAAAC----
--TTGTTTGGTTGAATCAAACGTATAGCAGCAGTATGTTTGCTTCTATCTGATGTTTCTTTGGAATTTTAACCTTAGA--
----------------------GTTTATATATAAATACCTGCTTTTTACATCACTTGTCCAAAATCACCCGTCCAACAAG
CTGAGCTAAATGTAAATTTGTTCGGAGGACGTGGTGAGGTAAAATGGCTGCCCACCG-GCGAACGCTAACTGCCTCTAGG
TACTTAGAGCAT--------------------------------------------------------------------
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----------------------------------
>chr5D_473
AAAAA---------------------------------------------------------------------------
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--------------------------AATTATGTTCTTCAAGATCTGCCTTCTCCATTGGTCGAACTTCTTCTCCTCCCG
TAGCACAAAAAAAAGGCGCGCTCCGGCTTGCTCGCCGCTCCGAACACCACAACCCTCTTCGGTGTTTTTGTTTTTTGAGA
ATCTCCCTCTTCGGTG---TTAGATCACTTCAAACAGGCGGAGCCAGAATGGTACAAAGAGAACTCGGCCTACTACCAGC
CCATTTCTCATTCCCAC--------TACACTAACAAACCGGCCCATGACAGCCCAGTCCACTCCTCATTTCGTCAGTCCG
TCACAGCACGGCCCGGCGACGCTATT-CACTGACGTTGCGGTCCTACTGCCTGCCCAAACGAATCCAACGGCCCAGACGC
GCCCCCATCCGCCATCCCGACCGTCCACCCTATGGGGTAATCAAACCACAAAGCCCGTGCCTCACCCTATATATTGCTCC
CTCTTCCTCCTCGTCGAACCCTAGCCCAGCTGCCCATCCATTCCCCTCGCCGC---CGCCGCCACTCCGCCGCTGCCGCC
GCCGAGATGGGTCGCGTGATCCGCGCTCAGCGTAAGGGTGCGGGCTCCGTCTTCAAGTCCCACACCCACCACCGCAAGGG
CCCCGCCCGGTTCAGGTCGCTCGACTTCGGCGAGCGCAACGGGTACCTCAAGGGCGTCGTCACCGATGTCATCCACGACC
CGGGGCGTGGTGCGCCGCTGGCCAAGGTGACCTTCCGCCACCCGTTCAGGTACAAGCACCAGAAGGAGCTCTTCGTCGCC
GCCGAGGGTATGTACACCGGCCAGTTCGTCTACTGCGGACGCCGAGCCACCCTCTCCGTCGGCAACGTCCTCCCGCTCCG
CTCCGTCCCTGAGGGAGGCGTCATCTGCAACGTCGAGCACCACGTCGGCGACCGTGGTGTCTTCGCCAGGGCCTCCGGTG
ACTACGCCATCGTCATCAGCCACAACCCCGACAACGGCACCTCAAGGTACTGTTCCCTTTCCTCTCAACCCTCTCTCTAA
A-GTA---CATTACTATGGTTAGATCTGACGTTCTCCTGCTAGTAACTGTCATTAGATTTGGTGTATGTGATTCGCTGAA
GGAATTGATTAAATGCTCATAGTTCGATCTGAGTATATGTTCGTTCACTGCTTCTGATATGTGTGATTTAGATGCTCTTT
AATTGATTAAGGATTGGAAACCTTAAATGTGTGTGT------------TTCATCTATCAAAGACAAATTCTTAGGAACTC
ATTCTGTCGTTGAGCCTTGAGATGTCTCCTGTTCATCGTATAATCTACAACTGTTACGATATGCT---------------
----------------------TGCTCTTCTGTTATCTTAGAACTGTACACGATATGCTTTCTTCTGTTAACTTTGAACT
TGGCATGACATGCTTTCTCTTCTGTTATCCTAGAACTGGACATGCATCTTGTAATTCTGTAAACATT--AAACCAGAGAC
ATGTGATCTCTAACTGTATTATCCTGCTTCTGTCTTCAGATTGGCCTACTGTGCTTT---AAG-ATTATGATCACTAGCG
TTTACTTAGATGTGGACCATTTCTTACTATCAGTT-CTTGTCAGTACAAGATCATAT-----------------------
-GTGTATTTTTGGTTATTTTGCCTGATGGCCTGATGCTTTTGATGAATTCTTCAGCTGTACAAATATTTAGACACAGTTA
CTCATGTTCTGTTTATGCAGGATCAAGCTCCCCTCTGGTGCCAAGAAGATTGTCCCAAGCAGCTGCCGTGCCATGATTGG
TCAGGTTGCTGGTGGTGGCAGGACTGAGAAGCCAATGCTCAAGGCTGGTAACGCCTACCACAAGTACCGTGTGAAGAGGA
ACTCCTGGCCTAAGGTGCGTGGTGTGGCCATGAACCCTGTGGAGCATCCCCACGGAGGAGGTAACCACCAGCATATTGGT
CACGCTTCCACTGTCCGCCGTGATGCACCACCTGGCCAGAAGGTTGGTCTCATTGCTGCCAGGAGGACTGGTCGTCTCAG
AGGCCAGGCTGCTGCCTCTGCTGCCAAGGCCGACAAGGCCACTTAGAGCTATCGTTGCTGTTTATCTATGTTTGCTGCCT
CTAGATTACCCGTCAAGGACATGTATTGCAGTATGGATGTCGTTTTTGCTC---ACTTTGGTAACCTGGTGATGTTTGTT
ATCAGTTTTCGCTGTCGTGGTCTGGATTCTTCGGTCCACATAAAGAAGATTAT---GCATGGATATTTGTTTGTCGAGTT
GCTTGAGTTAGCCCCTGGCGCTTATTTTTGT------TTACTGTTTTAGTTTAGCTATATTGCTGGATCTCTAAACGTAG
TTTTGTTTGGTCGAATCAAACAGTT-------GTATGTTTGCTTCTATCTCGTGGTTCTTTGGAATTTTAACCTTAGAGC
CTCTCCAATAGGTGAGTTAGATGTATATATAAAAATGCCTGATTTTTAGATCGCTTACCCAAAATCACCCGTCCAACAAA
CTGAGGTAAATGTAAATTTGATCTGAGAACGTGGTGATGTAAAACGGCCGCCCACCGTGAACGCCAA-------------
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>chr4B_902
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----------------------------------------------------------------CCCTATATATTGCTCC
CTCTTTTCCCTCCTCGAACCCTAGCCCAGCTGCCCACCCATTCCCCTCACCGC---CGCCGCCACTCCGCCTCTGCCGCC
GCCGAGATGGGTCGCGTGATCCGCGCTCAGCGTAAGGGTGCGGGCTCCGTCTTCAAGTCCCACACCCACCACCGCAAGGG
CCCCGCCCGGTTCAGGTCGCTCGACTTCGGCGAGCGCAACGGGTACCTCAAGGGCGTCGTCACCGATGTCATCCACGACC
CGGGGCGTGGTGCGCCGCTGGCCAAGGTGACCTTCCGCCACCCGTTCAGGTACAAGCACCAGAAGGAGCTCTTCGTCGCC
GCCGAGGGTATGTACACCGGCCAGTTCGTCTACTGCGGACGCCGCGCCACGCTCTCCGTCGGCAACGTCCTCCCGCTCCG
CTCCGTGCCTGAGGGAGGCGTCATCTGCAACGTCGAGCACCACGTCGGCGACCGTGGTGTTTTCGCCAGGGCCTCCGGTG
ACTACGCCATCGTCATCAGCCACAACCCCGACAACGGTACCTCAAGGTACTGTTCTTGTTCCTCTAATCCCTCATTATAA
ATTTA---TATGCCTATGGTTAG--------TTCTCCTGATAGTAACTGTTATTCGATTTGCTTTATGTGATTCGCGGTG
GGAAATGATGAAATGCTCATAGTTCGATCTGAATATATGTTCGTCCACTGCTTCTGATATGCGTGATTTAGATGCTCTTT
AATTTATAAAAGATTGGAAACCTTTAATGTGCGTGCTTTACATGTTTGTTAATTTCTCAAAGACCAATTCTTAGATACGC
ATTCTGCCGTTGAGCCTTGAGATGTTTTCTGTTCATCGTATAATCTGCAACAGTTAGGATATGCT---------------
----------------------TGCTCTTCTGTTATCCTAGAACTGGACATGAT--------------------------
---------ATGCTTGCTCTTCTGTTATCCTAGAACTGCACATGCATCTTAGAAGACTGTAAACCTTAAAAACCAGAGAC
ATGTGATCTCTAACTATGTTGTCCTGCTTCTGTCTTCAGATTGACCTAC----------AATA-ATTATGATTGCTAGCG
TTTGCATATACAAGGGCCATTTCTTATTATCAGTT-CTTGTCAGTACAAGATCCTACATTTTAATGAAATAGATATGATT
GGTGTATCTTTGTTTATGTTGCCTGATGGCCTGATTCTTTTGATGAATTCCTCAGCTGCACAAATATTAAGACGCA-CTA
CTCATGTTGTGTTTATGCAGGATCAAGCTCCCCTCTGGCGCCAAGAAGATCGTCCCAAGCAGCTGCCGTGCCATGATTGG
TCAGGTTGCTGGTGGTGGCAGGACTGAGAAGCCAATGCTGAAGGCTGGTAACGCCTACCACAAGTACCGCGTGAAGAGGA
ACTCCTGGCCTAAGGTGCGTGGTGTGGCCATGAACCCTGTTGAGCATCCCCACGGAGGAGGTAACCACCAGCATATTGGT
CACGCCTCCACTGTCCGCCGTGATGCACCACCTGGCCAGAAGGTTGGTCTCATCGCTGCCAGGAGGACTGGTCGTCTCAG
AGGCCAGGCCGCCGCCTCTGCTGCCAAGGCCGACAAGGCCACTTAGAGTTATCGTTGCTGTTTATCAATGTTTGCTAGCT
CTAGATTACCCGTCAAGGACATGTATTGCAGTAAGGATGTTGTTTTTGCTCGGTACTTTGGTAACCTGGTGATATTTGTT
GTCAGTTTTTGCTGTCGTGGTCTGGATTCTTCAGTCCACATAAAGAAGATTATTATGCTTGGGTATTTGTCTGTCGATTT
TCTTGA-----------------------GTTTACTGTTTCTGTTTTAGTTTAGCTCTATTGCTGCATCTCTGAACGGAT
TTTTGTTTGGTTGAATCAAACA----------------------------------------------------------
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>chr4A_904
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------------------------------------------------------------------CTATATATTGCTCC
CTCTTCTCCGTCCTCGAACCCTAGCCCAGCTGCCCACCCATTCCCCTCACCGC---CGCCGCCACTCCGCCTCTGCCGCC
GCCGAGATGGGTCGCGTGATCCGCGCTCAGCGTAAGGGTGCGGGCTCCGTCTTCAAGTCCCACACCCACCACCGCAAGGG
CCCCGCCCGGTTCAGGTCGCTCGACTTCGGCGAGCGCAACGGGTACCTCAAGGGCGTCGTCACCGATGTCATCCACGACC
CGGGGCGTGGTGCGCCGCTGGCCAAGGTGACCTTCCGCCACCCGTTCAGGTACAAGCACCAGAAGGAGCTCTTCGTCGCC
GCCGAGGGTATGTACACCGGCCAGTTCGTCTACTGCGGACGCCGCGCCACGCTCTCCGTCGGCAACGTCCTCCCGCTCCG
CTCCGTGCCTGAGGGAGGCGTCATCTGCAACGTCGAGCACCACGTCGGCGACCGTGGTGTCTTCGCCAGGGCCTCGGGTG
ACTACGCCATCGTCATCAGCCACAACCCCGACAACGGCACCTCAAGGTACTGTTCCTTGTCCTCTCACCCCTCTTTATAA
A-TTA---TATGCCTATGGTTAG--------TTCTCCTGATAGTAGCTGTTATTGGATTTGCTTCATGTGATTCGCGGTG
GGAAATGATGAAATGCTCATAGTTCGATCTGAATATATGTTCGTCCACTGCTTCTGATATGCGTGATTTAGATGCTCTTT
AATTGATTAAAGATTGGAAACCTTTAATGTGCGTGCTTTACATGTTTGTTAATTTCTCAAAGACCAATTCTTAGATACGC
ATTCTGTGGTTGAGCCTTGAGATGTTTTCTGTTCATTGTATAATCTGCAACAGTTATGATATGCT---------------
----------------------TGCTCTTCTGTTATCCTGGAACTGGACATGAT--------------------------
---------ATGCTTGCTCTTCTGTTATCCTAGAACTGCACATGCATCTTAGAAGACTTTAAACCTT--AAACCAGAGAC
ATGCGATCCCTAACTATTTTATCCTGCTTCTGTCTTCAGATTGACCTACCCTGCCTTCAAACA-ATTATGATTGTTAGCG
TTTGCATATACAAGGGCCATTTCTTATTATCAGTT-CTTGTCAGTACAATATCCTACATGTTAATGGAATAGATATGATT
GGTGTATCTTTGTTTATGTTGCCGGATGGCCTGATTCTTTTGATGAATGCTTCAGCTGCACAAATATTAAGACGCA-TTA
CTCATGTTGTGTTTATGCAGGATCAAGCTCCCCTCTGGCGCTAAGAAGATCGTCCCAAGCAGCTGTCGTGCCATGATTGG
TCAGGTTGCTGGTGGTGGCAGGACTGAGAAGCCAATGCTGAAGGCTGGTAATGCCTACCACAAGTACCGTGTGAAGAGGA
ACTCCTGGCCTAAGGTGCGTGGTGTGGCCATGAACCCTGTTGAGCATCCCCACGGAGGAGGTAACCACCAGCATATTGGT
CACGCCTCCACTGTCCGCCGTGATGCACCACCTGGCCAGAAGGTTGGTCTCATCGCTGCCAGGAGGACTGGTCGTCTCAG
AGGCCAGGCTGCCGCCTCTGCTGCCAAGGCTGACAAGGCCACTTAGAGTTATCATTGCTGTTTATCTATGTTTGCTAGCT
CTAGATTACCCGTCAGTGACATGTATTGCAGTAAGGATGTCGTTTTTGATCAGTACTTTGGTAACCTGGTGATATTTGTT
ATCAGTTTTCGCTGTCGTGGTCTGGATTCTTCAGTCCACATAAAGAAGATTATTATGCTTGGATATTTGTCTGTCGATTT
TCATGAGTTAGCCTCTGGTGCTTATTTTGGTTTACTGTTTCTGTTTTAGTTTAGCTCTATTGCTGTATCTCTGAAAGGAT
TTTTGTTTGGTTGAATCAAACA----------------------------------------------------------
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>chr4D_904
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------------------------------------------------------------------CTATATATTGCTCC
CTCTTCTCCCTCCTCGAACCCTAGCCCAGCTGCCCACCCATTCCCCTCACGGC---CGCCGCCACTCCGCCTCTGCCGCC
GCCGAGATGGGTCGCGTGATCCGCGCTCAGCGTAAGGGTGCGGGCTCCGTCTTCAAGTCCCACACCCACCACCGCAAGGG
CCCCGCCCGGTTCAGGTCGCTCGACTTCGGCGAGCGCAACGGGTACCTCAAGGGCGTCGTCACAGATGTCATCCACGACC
CGGGGCGTGGTGCGCCGCTGGCCAAGGTGACCTTCCGCCACCCGTTCAGGTACAAGCACCAGAAGGAGCTCTTCGTCGCC
GCCGAGGGTATGTACACCGGCCAGTTCGTCTACTGCGGACGCCGCGCCACGCTCTCCGTCGGCAACGTCCTCCCGCTCCG
CTCCGTGCCTGAGGGAGGCGTCATCTGCAACGTCGAGCACCACGTCGGCGACCGTGGTGTCTTCGCCAGGGCCTCCGGTG
ACTACGCCATCGTCATCAGCCACAACCCCGACAACGGCACCTCAAGGTACTGTTCCTTTTCCTCTCAATCCTCTTTATAA
A-TTAGTATATGCCTATGGTTAGTTCTGACGTTCTCCTGATAGTAACTGTTACTGGATTTGCTTTATGTGATTCGCGGTG
ACAAATGATGAAATGCTCATAGTTCGATCTGAATGTATGTTCGTTCACTGCTTCTGATATGCGTGATTTAGATGCCCTTT
AATTGATTAAAGATTGGAAACCTTCAATGTGCGTGCTTTACATGTTTGTTAATTTCTCAAAGACCAATTCTTAGATACGC
ATTCTGTCGTTGAGCCTTGAGATGTTTTCTGTTC-TTGTATAATCTGCAACAGTTACGATATGCGTGCTCTTCTGTTATC
CTAGAACTGGACATGATATGCCTGCTCTTCTGTTTTCCTAGAACTGGACATGAT--------------------------
---------ATGCTTGCTCTTCTGTTATCCTATAACTGCACATGCATCTTAGAAGACAGTAAACCTT--AAACCAGAGAC
ATGTGATCTCTAACTATGTTGTCCTGCTTCTGTCTTCAGATTGACCTACCCTGCCTTCAAG-A-ATTATGATTGCTAGCG
TTTGCATATACAAGGGCCATTTCTTATTATCATTG-CTCGCCAGTACAAGATCCTACATGTTAATGGAATAGATATGATT
GGCGTATCTTTGTTTATGTTTCCTGATGGCCTGATTCTTTTGATGAATTTTTCAGCTGCACAAATATTAAGACGCA-TTA
TTCATGTTGTGTTTATGCAGGATCAAGCTCCCCTCCGGCGCCAAGAAGATCGTCCCAAGCAGCTGCCGTGCCATGATTGG
TCAGGTTGCTGGTGGTGGCAGGACTGAGAAGCCAATGCTGAAGGCTGGTAACGCCTACCACAAGTACCGCGTGAAGAGGA
ACTCCTGGCCTAAGGTGCGTGGTGTGGCCATGAACCCTGTTGAGCATCCCCACGGAGGAGGTAACCACCAGCATATTGGT
CACGCCTCCACTGTCCGCCGTGATGCACCACCTGGCCAGAAGGTTGGTCTCATCGCTGCCAGGAGGACTGGTCGTCTCAG
AGGCCAGGCCGCCGCCTCTGCTGCCAAGGCCGACAAGGCCACTTAGAGTTATCGTTGCTGTTTATCTATGTTTGCTAGCT
CTAGATTACCCGTCAAGGACATGTATTGCAGTAAGGATGTTGTTTTTGCTCGGTACTTTGGTAACCTGGTGATATTTCTT
ATCAGTTTTTGCTGTCGTGGTCTGGATTCTTCAGTCCACATAAGGAAGATTATTATGCTTGGATATTTGTATGTCGATTT
TCTTGAGTTT----------------------------------------------------------------------
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>SNPs
------------------------SS---------------------------------S-S-SS---------------
---SSSSSSS----S----S--S-S----S---S-S------S--S----------------S-S-----S--S-----S
---SS-SSSS------------S-------------S-----SSS--------------S--------S-----------
S--S--------------------SS--SS----S---------------S--S-----------------S-----SS-
S---S-S------SS----------------S--------------S------S-S--------S--------------S
--SS-S----SSSSS-------------SSS---S-----S---SS--S---S--------SS-S----------S----
S--------S----S-SSSSSSSSSS---------------S----------------------S---------------
------------------------S-------------------------------------------SS----------
---S--SS-SS-SSSSSSS-------------------------------------------------------------
-----------------SSSSSSSS---------------------S--------------------------------S
-------------------------S------------S----------------------------------S------
----------S---------------------------------------------------------------------
-----------S-------------------------------------------------------------S------
--------------------------------------------------------------------------------
---------S----------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------S--S-----------------
--------------------------------------------------------------------------------
----------------------------S-------------------------S-------------------S-----
--------------S---------S--------------S--------------------S------------S------
------------------------S------------------------------S-----S------------------
--------------------------------------------S-----------------------------------
-------------------------------------------------S-------S----------------------
-----------------------------------S-------S--------------------------S-S-------
--S-----S-------S----------------SS---------------------------------------------
---------------------------------------------S----------------------------------
-------------------------S---------S-----------S--------------------------------
-----------------------------S-----------------------S--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------S----------------------------------S--------------
-----------------------------S---------------------S----------------------------
---------------------S---------------------------------------------S------------
--------------S--------SSS-----------------SS----------------------------SS-SS-S
S----------------------S---------S-----------------------------------------S----
------------------------------------------------------------------S-----------S-
------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_545
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------TGCCTTCTCCATTGGTCGAC---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------
>reverse_1495
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------ACCTTTCCTCTCACCCCTCT------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------
>forward_839
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------ACGCTATGTCACTGACGTTGT-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------
>reverse_2671
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------ATATGGATGTCGTTTTTGCTCGG---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------
