Multiple sequence alignment - TraesCS5A01G062000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G062000 chr5A 100.000 3093 0 0 1 3093 66089855 66092947 0.000000e+00 5712.0
1 TraesCS5A01G062000 chr5A 85.095 369 35 8 2174 2523 10722155 10722522 2.930000e-95 359.0
2 TraesCS5A01G062000 chr2D 86.272 2127 209 41 221 2324 628939105 628937039 0.000000e+00 2233.0
3 TraesCS5A01G062000 chr2D 87.865 445 37 10 2280 2715 628941905 628941469 9.900000e-140 507.0
4 TraesCS5A01G062000 chr2D 75.272 1011 198 38 1004 1983 493882759 493881770 4.740000e-118 435.0
5 TraesCS5A01G062000 chr2D 83.459 133 11 3 2629 2757 628936567 628936442 2.520000e-21 113.0
6 TraesCS5A01G062000 chr2D 88.095 84 6 2 2417 2496 628937032 628936949 2.540000e-16 97.1
7 TraesCS5A01G062000 chr3B 89.705 1253 101 17 231 1464 499056922 499058165 0.000000e+00 1574.0
8 TraesCS5A01G062000 chr3B 90.631 1078 81 5 1467 2532 499058229 499059298 0.000000e+00 1413.0
9 TraesCS5A01G062000 chr5B 81.893 729 95 14 519 1241 2056007 2056704 5.750000e-162 580.0
10 TraesCS5A01G062000 chr2A 74.929 1053 206 42 965 1983 639695261 639696289 2.200000e-116 429.0
11 TraesCS5A01G062000 chr7A 74.038 1013 214 38 965 1949 219397435 219398426 4.870000e-98 368.0
12 TraesCS5A01G062000 chr5D 84.224 393 42 12 2149 2523 340337 340727 6.300000e-97 364.0
13 TraesCS5A01G062000 chr6B 75.077 650 146 15 777 1419 159702853 159703493 3.900000e-74 289.0
14 TraesCS5A01G062000 chr6B 72.031 901 215 30 537 1415 95237535 95236650 1.850000e-57 233.0
15 TraesCS5A01G062000 chr6A 75.077 650 146 14 777 1419 101315371 101316011 3.900000e-74 289.0
16 TraesCS5A01G062000 chr6A 78.311 438 87 7 986 1419 101354667 101355100 3.040000e-70 276.0
17 TraesCS5A01G062000 chr6D 74.495 643 154 10 777 1415 84084605 84085241 1.410000e-68 270.0
18 TraesCS5A01G062000 chr6D 74.044 366 79 13 1061 1418 440220219 440219862 5.380000e-28 135.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G062000 chr5A 66089855 66092947 3092 False 5712.000 5712 100.00000 1 3093 1 chr5A.!!$F2 3092
1 TraesCS5A01G062000 chr2D 628936442 628941905 5463 True 737.525 2233 86.42275 221 2757 4 chr2D.!!$R2 2536
2 TraesCS5A01G062000 chr2D 493881770 493882759 989 True 435.000 435 75.27200 1004 1983 1 chr2D.!!$R1 979
3 TraesCS5A01G062000 chr3B 499056922 499059298 2376 False 1493.500 1574 90.16800 231 2532 2 chr3B.!!$F1 2301
4 TraesCS5A01G062000 chr5B 2056007 2056704 697 False 580.000 580 81.89300 519 1241 1 chr5B.!!$F1 722
5 TraesCS5A01G062000 chr2A 639695261 639696289 1028 False 429.000 429 74.92900 965 1983 1 chr2A.!!$F1 1018
6 TraesCS5A01G062000 chr7A 219397435 219398426 991 False 368.000 368 74.03800 965 1949 1 chr7A.!!$F1 984
7 TraesCS5A01G062000 chr6B 159702853 159703493 640 False 289.000 289 75.07700 777 1419 1 chr6B.!!$F1 642
8 TraesCS5A01G062000 chr6B 95236650 95237535 885 True 233.000 233 72.03100 537 1415 1 chr6B.!!$R1 878
9 TraesCS5A01G062000 chr6A 101315371 101316011 640 False 289.000 289 75.07700 777 1419 1 chr6A.!!$F1 642
10 TraesCS5A01G062000 chr6D 84084605 84085241 636 False 270.000 270 74.49500 777 1415 1 chr6D.!!$F1 638

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
703 3298 0.096976 CGCGTTACATCAAGCCCAAG 59.903 55.0 0.0 0.0 0.0 3.61 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2403 5127 0.098728 AACACAAGTGCGTCAGTTGC 59.901 50.0 20.24 0.0 45.5 4.17 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 4.408378 CGATTTCGGTTGGGGGTT 57.592 55.556 0.00 0.00 35.37 4.11
32 33 2.177044 CGATTTCGGTTGGGGGTTC 58.823 57.895 0.00 0.00 35.37 3.62
33 34 0.606944 CGATTTCGGTTGGGGGTTCA 60.607 55.000 0.00 0.00 35.37 3.18
34 35 1.173913 GATTTCGGTTGGGGGTTCAG 58.826 55.000 0.00 0.00 0.00 3.02
37 38 0.326927 TTCGGTTGGGGGTTCAGATC 59.673 55.000 0.00 0.00 0.00 2.75
38 39 1.077716 CGGTTGGGGGTTCAGATCC 60.078 63.158 0.00 0.00 0.00 3.36
41 42 4.700887 TGGGGGTTCAGATCCCAA 57.299 55.556 17.21 3.40 46.73 4.12
42 43 2.397815 TGGGGGTTCAGATCCCAAG 58.602 57.895 17.21 0.00 46.73 3.61
43 44 1.076705 GGGGGTTCAGATCCCAAGC 60.077 63.158 17.21 1.50 46.26 4.01
44 45 1.452108 GGGGTTCAGATCCCAAGCG 60.452 63.158 17.21 0.00 46.26 4.68
45 46 1.452108 GGGTTCAGATCCCAAGCGG 60.452 63.158 11.37 0.00 44.05 5.52
47 48 0.744771 GGTTCAGATCCCAAGCGGAC 60.745 60.000 0.00 0.00 46.09 4.79
48 49 0.250513 GTTCAGATCCCAAGCGGACT 59.749 55.000 0.00 0.00 46.09 3.85
49 50 0.537188 TTCAGATCCCAAGCGGACTC 59.463 55.000 0.00 0.00 46.09 3.36
50 51 1.227089 CAGATCCCAAGCGGACTCG 60.227 63.158 0.00 0.00 46.09 4.18
51 52 1.379977 AGATCCCAAGCGGACTCGA 60.380 57.895 0.00 0.00 46.09 4.04
53 54 1.668101 GATCCCAAGCGGACTCGACT 61.668 60.000 0.00 0.00 46.09 4.18
54 55 1.668101 ATCCCAAGCGGACTCGACTC 61.668 60.000 0.00 0.00 46.09 3.36
57 58 1.209383 CAAGCGGACTCGACTCGAA 59.791 57.895 2.16 0.00 39.00 3.71
59 60 0.313043 AAGCGGACTCGACTCGAAAA 59.687 50.000 2.16 0.00 39.00 2.29
60 61 0.109689 AGCGGACTCGACTCGAAAAG 60.110 55.000 2.16 0.00 39.00 2.27
61 62 1.071567 GCGGACTCGACTCGAAAAGG 61.072 60.000 2.16 0.00 39.00 3.11
63 64 1.466024 CGGACTCGACTCGAAAAGGAG 60.466 57.143 2.16 0.00 39.00 3.69
66 67 1.200484 ACTCGACTCGAAAAGGAGCTC 59.800 52.381 4.71 4.71 37.57 4.09
68 69 1.887198 TCGACTCGAAAAGGAGCTCTT 59.113 47.619 14.64 2.08 37.57 2.85
69 70 2.296471 TCGACTCGAAAAGGAGCTCTTT 59.704 45.455 14.64 9.89 46.82 2.52
82 83 8.427902 AAAGGAGCTCTTTTTATTCAAATCCT 57.572 30.769 17.40 0.00 42.62 3.24
83 84 7.637631 AGGAGCTCTTTTTATTCAAATCCTC 57.362 36.000 14.64 0.00 0.00 3.71
84 85 6.317391 AGGAGCTCTTTTTATTCAAATCCTCG 59.683 38.462 14.64 0.00 0.00 4.63
85 86 6.316390 GGAGCTCTTTTTATTCAAATCCTCGA 59.684 38.462 14.64 0.00 0.00 4.04
86 87 7.078011 AGCTCTTTTTATTCAAATCCTCGAC 57.922 36.000 0.00 0.00 0.00 4.20
87 88 6.094186 AGCTCTTTTTATTCAAATCCTCGACC 59.906 38.462 0.00 0.00 0.00 4.79
89 90 7.377766 TCTTTTTATTCAAATCCTCGACCTG 57.622 36.000 0.00 0.00 0.00 4.00
90 91 7.165485 TCTTTTTATTCAAATCCTCGACCTGA 58.835 34.615 0.00 0.00 0.00 3.86
99 100 1.739049 CTCGACCTGAGGGAGATGC 59.261 63.158 2.38 0.00 41.29 3.91
100 101 0.754957 CTCGACCTGAGGGAGATGCT 60.755 60.000 2.38 0.00 41.29 3.79
101 102 0.753479 TCGACCTGAGGGAGATGCTC 60.753 60.000 2.38 0.00 36.25 4.26
102 103 0.754957 CGACCTGAGGGAGATGCTCT 60.755 60.000 2.38 0.00 36.25 4.09
103 104 1.477740 CGACCTGAGGGAGATGCTCTA 60.478 57.143 2.38 0.00 36.25 2.43
104 105 2.672098 GACCTGAGGGAGATGCTCTAA 58.328 52.381 2.38 0.00 36.25 2.10
106 107 3.238597 ACCTGAGGGAGATGCTCTAATC 58.761 50.000 2.38 0.00 36.25 1.75
108 109 3.258872 CCTGAGGGAGATGCTCTAATCAG 59.741 52.174 0.00 0.00 35.84 2.90
109 110 3.237746 TGAGGGAGATGCTCTAATCAGG 58.762 50.000 0.00 0.00 0.00 3.86
110 111 3.116977 TGAGGGAGATGCTCTAATCAGGA 60.117 47.826 0.00 0.00 0.00 3.86
112 113 4.501433 AGGGAGATGCTCTAATCAGGATT 58.499 43.478 0.00 0.00 34.93 3.01
113 114 4.286549 AGGGAGATGCTCTAATCAGGATTG 59.713 45.833 4.81 0.00 32.50 2.67
114 115 4.565236 GGGAGATGCTCTAATCAGGATTGG 60.565 50.000 4.81 2.08 32.50 3.16
116 117 5.221803 GGAGATGCTCTAATCAGGATTGGAA 60.222 44.000 9.01 0.00 37.74 3.53
117 118 5.619220 AGATGCTCTAATCAGGATTGGAAC 58.381 41.667 9.01 5.86 37.74 3.62
118 119 4.156455 TGCTCTAATCAGGATTGGAACC 57.844 45.455 9.01 4.79 37.74 3.62
120 121 3.181465 GCTCTAATCAGGATTGGAACCGA 60.181 47.826 9.01 0.00 37.74 4.69
124 125 6.423182 TCTAATCAGGATTGGAACCGAAAAT 58.577 36.000 5.71 0.00 35.73 1.82
126 127 3.352648 TCAGGATTGGAACCGAAAATCC 58.647 45.455 11.23 11.23 46.52 3.01
127 128 2.844122 GGATTGGAACCGAAAATCCG 57.156 50.000 5.92 0.00 39.86 4.18
128 129 2.089201 GGATTGGAACCGAAAATCCGT 58.911 47.619 5.92 0.00 39.86 4.69
129 130 2.096980 GGATTGGAACCGAAAATCCGTC 59.903 50.000 5.92 0.00 39.86 4.79
130 131 1.525941 TTGGAACCGAAAATCCGTCC 58.474 50.000 0.00 0.00 38.63 4.79
131 132 0.671163 TGGAACCGAAAATCCGTCCG 60.671 55.000 0.00 0.00 38.63 4.79
133 134 1.404047 GGAACCGAAAATCCGTCCGTA 60.404 52.381 0.00 0.00 0.00 4.02
134 135 2.336667 GAACCGAAAATCCGTCCGTAA 58.663 47.619 0.00 0.00 0.00 3.18
136 137 2.976589 ACCGAAAATCCGTCCGTAAAT 58.023 42.857 0.00 0.00 0.00 1.40
137 138 2.931969 ACCGAAAATCCGTCCGTAAATC 59.068 45.455 0.00 0.00 0.00 2.17
138 139 2.286025 CCGAAAATCCGTCCGTAAATCC 59.714 50.000 0.00 0.00 0.00 3.01
139 140 2.931325 CGAAAATCCGTCCGTAAATCCA 59.069 45.455 0.00 0.00 0.00 3.41
140 141 3.558418 CGAAAATCCGTCCGTAAATCCAT 59.442 43.478 0.00 0.00 0.00 3.41
141 142 4.746115 CGAAAATCCGTCCGTAAATCCATA 59.254 41.667 0.00 0.00 0.00 2.74
142 143 5.107607 CGAAAATCCGTCCGTAAATCCATAG 60.108 44.000 0.00 0.00 0.00 2.23
143 144 5.540400 AAATCCGTCCGTAAATCCATAGA 57.460 39.130 0.00 0.00 0.00 1.98
144 145 5.540400 AATCCGTCCGTAAATCCATAGAA 57.460 39.130 0.00 0.00 0.00 2.10
146 147 6.845758 ATCCGTCCGTAAATCCATAGAATA 57.154 37.500 0.00 0.00 0.00 1.75
147 148 6.653526 TCCGTCCGTAAATCCATAGAATAA 57.346 37.500 0.00 0.00 0.00 1.40
148 149 7.053316 TCCGTCCGTAAATCCATAGAATAAA 57.947 36.000 0.00 0.00 0.00 1.40
149 150 7.499292 TCCGTCCGTAAATCCATAGAATAAAA 58.501 34.615 0.00 0.00 0.00 1.52
150 151 7.986320 TCCGTCCGTAAATCCATAGAATAAAAA 59.014 33.333 0.00 0.00 0.00 1.94
166 167 3.353342 AAAAAGGCAGCCTCAGAGG 57.647 52.632 16.53 12.81 38.80 3.69
169 170 2.195692 AAAGGCAGCCTCAGAGGAGC 62.196 60.000 21.89 21.20 37.67 4.70
170 171 3.397439 GGCAGCCTCAGAGGAGCA 61.397 66.667 26.68 0.00 38.97 4.26
171 172 2.667418 GCAGCCTCAGAGGAGCAA 59.333 61.111 21.89 0.00 37.67 3.91
172 173 1.744741 GCAGCCTCAGAGGAGCAAC 60.745 63.158 21.89 1.44 37.67 4.17
173 174 1.078567 CAGCCTCAGAGGAGCAACC 60.079 63.158 21.89 0.65 37.67 3.77
174 175 1.537397 AGCCTCAGAGGAGCAACCA 60.537 57.895 21.89 0.00 37.67 3.67
175 176 1.078567 GCCTCAGAGGAGCAACCAG 60.079 63.158 21.89 0.00 37.67 4.00
176 177 1.601171 CCTCAGAGGAGCAACCAGG 59.399 63.158 11.62 0.00 37.67 4.45
177 178 1.078567 CTCAGAGGAGCAACCAGGC 60.079 63.158 2.96 0.00 42.04 4.85
178 179 2.045536 CAGAGGAGCAACCAGGCC 60.046 66.667 0.00 0.00 42.04 5.19
179 180 2.204059 AGAGGAGCAACCAGGCCT 60.204 61.111 0.00 0.00 42.04 5.19
181 182 1.676967 GAGGAGCAACCAGGCCTTG 60.677 63.158 0.00 0.68 42.04 3.61
186 187 3.604667 CAACCAGGCCTTGCGCAA 61.605 61.111 23.48 23.48 40.31 4.85
188 189 2.639327 AACCAGGCCTTGCGCAATC 61.639 57.895 25.26 17.77 40.31 2.67
189 190 4.183686 CCAGGCCTTGCGCAATCG 62.184 66.667 25.26 17.54 40.31 3.34
211 212 3.493767 AAGAGAAGAAAAGGAGCCGTT 57.506 42.857 0.00 0.00 0.00 4.44
212 213 3.493767 AGAGAAGAAAAGGAGCCGTTT 57.506 42.857 0.00 0.00 0.00 3.60
213 214 4.618920 AGAGAAGAAAAGGAGCCGTTTA 57.381 40.909 0.44 0.00 0.00 2.01
214 215 5.167303 AGAGAAGAAAAGGAGCCGTTTAT 57.833 39.130 0.44 0.00 0.00 1.40
215 216 5.561679 AGAGAAGAAAAGGAGCCGTTTATT 58.438 37.500 7.36 7.36 33.18 1.40
216 217 6.004574 AGAGAAGAAAAGGAGCCGTTTATTT 58.995 36.000 8.71 3.92 31.37 1.40
218 219 7.014326 AGAGAAGAAAAGGAGCCGTTTATTTTT 59.986 33.333 8.71 2.54 31.37 1.94
219 220 8.173542 AGAAGAAAAGGAGCCGTTTATTTTTA 57.826 30.769 8.71 0.00 31.37 1.52
258 2843 7.667283 CAAAGTTTGTGTCACGAGATATAGTC 58.333 38.462 7.48 0.00 0.00 2.59
350 2940 7.776933 TTCGACTTCTTTGATCCATCTAATG 57.223 36.000 0.00 0.00 0.00 1.90
372 2962 0.251077 GCTATCCCTGGCCAATGAGG 60.251 60.000 7.01 3.91 41.84 3.86
381 2971 1.508088 GCCAATGAGGGACTTTGCG 59.492 57.895 0.00 0.00 41.55 4.85
444 3039 4.037923 TGTTTTCTCCTCCTTTGTTCATGC 59.962 41.667 0.00 0.00 0.00 4.06
448 3043 1.358787 TCCTCCTTTGTTCATGCCCAT 59.641 47.619 0.00 0.00 0.00 4.00
477 3072 7.010830 GGCTCATTTTCTTTCCTTGATTAATGC 59.989 37.037 0.00 0.00 0.00 3.56
492 3087 0.889994 AATGCGATGCAGAAAGCCAA 59.110 45.000 0.00 0.00 43.65 4.52
505 3100 4.410743 GCCAAAGCTCGCTGCCAC 62.411 66.667 0.00 0.00 44.23 5.01
560 3155 0.460811 TAGCAAGCTGCCAGATCACG 60.461 55.000 4.53 0.00 46.52 4.35
587 3182 1.909302 TCAACATCCTGGAGAGGGTTC 59.091 52.381 1.52 0.00 40.25 3.62
593 3188 2.599281 TGGAGAGGGTTCGCACGA 60.599 61.111 0.00 0.00 0.00 4.35
703 3298 0.096976 CGCGTTACATCAAGCCCAAG 59.903 55.000 0.00 0.00 0.00 3.61
714 3309 2.668550 GCCCAAGGTCGACACCAC 60.669 66.667 18.91 0.00 46.68 4.16
738 3342 9.525007 CACTAATCGTATTTTTCAGTACAACAC 57.475 33.333 0.00 0.00 0.00 3.32
756 3360 0.545171 ACTGCTGTGGCTGCTATCAT 59.455 50.000 0.00 0.00 40.37 2.45
757 3361 1.064906 ACTGCTGTGGCTGCTATCATT 60.065 47.619 0.00 0.00 40.37 2.57
760 3364 1.602851 GCTGTGGCTGCTATCATTGAG 59.397 52.381 0.00 0.00 35.22 3.02
774 3378 3.242867 TCATTGAGAAGGTCCTGAGTGT 58.757 45.455 0.00 0.00 0.00 3.55
784 3388 2.183679 GTCCTGAGTGTGAGGAATCCT 58.816 52.381 0.00 0.00 41.42 3.24
955 3576 2.830923 CACTGAAGACCATCTCCTCTGT 59.169 50.000 0.00 0.00 0.00 3.41
960 3581 4.141846 TGAAGACCATCTCCTCTGTTATGC 60.142 45.833 0.00 0.00 0.00 3.14
961 3582 2.703007 AGACCATCTCCTCTGTTATGCC 59.297 50.000 0.00 0.00 0.00 4.40
977 3598 1.729881 GCCCCAAGCGCTTCAATAG 59.270 57.895 22.21 8.70 0.00 1.73
982 3603 1.468054 CCAAGCGCTTCAATAGTTGGC 60.468 52.381 22.21 0.00 0.00 4.52
998 3619 0.895100 TGGCTTGGTGATTGTCCTGC 60.895 55.000 0.00 0.00 0.00 4.85
999 3620 1.598701 GGCTTGGTGATTGTCCTGCC 61.599 60.000 0.00 0.00 37.78 4.85
1075 3696 0.816825 CATCCCCAACATCCTCAGCG 60.817 60.000 0.00 0.00 0.00 5.18
1080 3701 1.376424 CAACATCCTCAGCGCCTGT 60.376 57.895 2.29 0.00 32.61 4.00
1084 3705 0.461548 CATCCTCAGCGCCTGTAAGA 59.538 55.000 2.29 0.00 34.07 2.10
1105 3726 1.338200 GGTTGGAATCACTGCGTCTCT 60.338 52.381 0.00 0.00 0.00 3.10
1128 3749 2.063015 ATTGTGACGCAGGGGTCCAA 62.063 55.000 13.07 15.07 36.07 3.53
1205 3826 4.320788 GGAATTTGAAGCAGTCCAACTCAG 60.321 45.833 0.00 0.00 0.00 3.35
1274 3895 4.774200 CCAAGAAGATCCCCTGATTTTTGT 59.226 41.667 0.00 0.00 0.00 2.83
1313 3934 6.671614 TTCAAAGCTAACACTCGAAAAAGA 57.328 33.333 0.00 0.00 0.00 2.52
1326 3947 4.637276 TCGAAAAAGATGGTGTTAGCTCA 58.363 39.130 0.00 0.00 0.00 4.26
1415 4036 8.722394 GGATTTTAGAAGTGAAAAGGTACTCAG 58.278 37.037 0.00 0.00 38.49 3.35
1425 4069 1.141234 GGTACTCAGTAGCCGCCAC 59.859 63.158 2.28 0.00 31.28 5.01
1430 4074 0.032678 CTCAGTAGCCGCCACCTATG 59.967 60.000 0.00 0.00 0.00 2.23
1521 4230 3.993736 GGGTGTGATGTAATTTGTTTGCC 59.006 43.478 0.00 0.00 0.00 4.52
1584 4299 1.408822 GGTTCTACCTGAATGCCCCAG 60.409 57.143 0.00 0.00 36.99 4.45
1593 4308 0.610232 GAATGCCCCAGACTGCTTGT 60.610 55.000 0.00 0.00 0.00 3.16
1639 4354 3.599343 TGTGAATCTGGACAATCTTCCG 58.401 45.455 0.00 0.00 38.69 4.30
1681 4396 3.426695 GGACCATGTTCATTCTTGAAGCG 60.427 47.826 0.00 0.00 42.41 4.68
1725 4440 1.821216 GTCACGGTGTGGGATCATTT 58.179 50.000 8.17 0.00 33.87 2.32
1794 4509 4.713553 TGTGAGAAAGCAAATGTGGAGTA 58.286 39.130 0.00 0.00 0.00 2.59
1795 4510 4.515191 TGTGAGAAAGCAAATGTGGAGTAC 59.485 41.667 0.00 0.00 0.00 2.73
1832 4555 8.169977 AGTTCATTTTAAGCACAAGAATCTGA 57.830 30.769 0.00 0.00 0.00 3.27
1846 4569 5.091261 AGAATCTGATTAAGCTCACCGTT 57.909 39.130 2.28 0.00 0.00 4.44
1900 4623 2.665777 CGTTAGGCGTGTCATGGAG 58.334 57.895 0.00 0.00 35.54 3.86
1913 4636 2.421424 GTCATGGAGATTGCAGTGAACC 59.579 50.000 0.00 0.00 0.00 3.62
1945 4668 2.103373 TCTCTGTATGACTGGCAGGTC 58.897 52.381 20.34 13.90 36.81 3.85
2015 4738 0.179108 GTATCCACGGACCAGTGAGC 60.179 60.000 15.29 2.66 44.43 4.26
2034 4757 3.118531 AGCAGAAGGATATGTTGAGGGT 58.881 45.455 0.00 0.00 0.00 4.34
2054 4777 4.141688 GGGTGGAGATTACTAAGGAGTTGG 60.142 50.000 0.00 0.00 37.10 3.77
2055 4778 4.470304 GGTGGAGATTACTAAGGAGTTGGT 59.530 45.833 0.00 0.00 37.10 3.67
2056 4779 5.395435 GGTGGAGATTACTAAGGAGTTGGTC 60.395 48.000 0.00 0.00 37.10 4.02
2146 4869 7.593273 CGTCATCAGTAAAATCTAGAGTCCATC 59.407 40.741 0.00 0.00 0.00 3.51
2148 4871 8.637099 TCATCAGTAAAATCTAGAGTCCATCTG 58.363 37.037 0.00 3.86 39.20 2.90
2149 4872 7.962995 TCAGTAAAATCTAGAGTCCATCTGT 57.037 36.000 0.00 0.00 39.20 3.41
2150 4873 8.001881 TCAGTAAAATCTAGAGTCCATCTGTC 57.998 38.462 0.00 0.00 39.20 3.51
2151 4874 7.068839 TCAGTAAAATCTAGAGTCCATCTGTCC 59.931 40.741 0.00 0.00 39.20 4.02
2152 4875 6.897966 AGTAAAATCTAGAGTCCATCTGTCCA 59.102 38.462 0.00 0.00 39.20 4.02
2153 4876 6.821616 AAAATCTAGAGTCCATCTGTCCAT 57.178 37.500 0.00 0.00 39.20 3.41
2154 4877 5.804944 AATCTAGAGTCCATCTGTCCATG 57.195 43.478 0.00 0.00 39.20 3.66
2155 4878 4.256983 TCTAGAGTCCATCTGTCCATGT 57.743 45.455 0.00 0.00 39.20 3.21
2156 4879 5.388599 TCTAGAGTCCATCTGTCCATGTA 57.611 43.478 0.00 0.00 39.20 2.29
2213 4937 5.517054 GTCTATGTAGTTTCAAGGAGCTTCG 59.483 44.000 0.00 0.00 0.00 3.79
2376 5100 8.630037 ACCTCTTACAAGTTTGATAGGTTTTTG 58.370 33.333 0.00 0.00 0.00 2.44
2445 5169 7.064134 TGTTTTCTGCTTGGTCTATGTTATACG 59.936 37.037 0.00 0.00 0.00 3.06
2454 5182 6.403049 TGGTCTATGTTATACGCATTATGGG 58.597 40.000 7.74 7.74 36.28 4.00
2493 5221 5.463724 GTGTTAGCCTGATGCATACTAAGTC 59.536 44.000 0.00 0.00 44.83 3.01
2542 5347 4.163839 CCTCAGGTCTCCAATCTTCAGATT 59.836 45.833 0.00 0.00 44.93 2.40
2562 5374 9.662947 TCAGATTTATTATCAGCCTGACATATG 57.337 33.333 0.00 0.00 0.00 1.78
2571 5383 7.666063 ATCAGCCTGACATATGCAGTATATA 57.334 36.000 19.23 7.26 30.75 0.86
2573 5385 8.766994 TCAGCCTGACATATGCAGTATATATA 57.233 34.615 19.23 0.00 30.75 0.86
2574 5386 9.372189 TCAGCCTGACATATGCAGTATATATAT 57.628 33.333 19.23 0.00 30.75 0.86
2575 5387 9.993454 CAGCCTGACATATGCAGTATATATATT 57.007 33.333 19.23 0.00 30.75 1.28
2602 5414 5.982890 ATGGTCAAATGGTAGAAAGGTTG 57.017 39.130 0.00 0.00 0.00 3.77
2609 5421 6.723977 TCAAATGGTAGAAAGGTTGGCTTAAT 59.276 34.615 0.00 0.00 0.00 1.40
2612 5424 5.390387 TGGTAGAAAGGTTGGCTTAATGTT 58.610 37.500 0.00 0.00 0.00 2.71
2615 5427 7.147637 TGGTAGAAAGGTTGGCTTAATGTTTTT 60.148 33.333 0.00 0.00 0.00 1.94
2652 5629 8.910351 AAGTATAAACTTTCTTGCTCTCAACT 57.090 30.769 0.00 0.00 43.60 3.16
2658 5635 6.852858 ACTTTCTTGCTCTCAACTAAGTTC 57.147 37.500 0.00 0.00 31.80 3.01
2663 5640 5.303078 TCTTGCTCTCAACTAAGTTCTGTCT 59.697 40.000 0.00 0.00 0.00 3.41
2664 5641 6.490381 TCTTGCTCTCAACTAAGTTCTGTCTA 59.510 38.462 0.00 0.00 0.00 2.59
2665 5642 6.842437 TGCTCTCAACTAAGTTCTGTCTAT 57.158 37.500 0.00 0.00 0.00 1.98
2666 5643 7.233389 TGCTCTCAACTAAGTTCTGTCTATT 57.767 36.000 0.00 0.00 0.00 1.73
2667 5644 7.671302 TGCTCTCAACTAAGTTCTGTCTATTT 58.329 34.615 0.00 0.00 0.00 1.40
2668 5645 8.150945 TGCTCTCAACTAAGTTCTGTCTATTTT 58.849 33.333 0.00 0.00 0.00 1.82
2669 5646 8.439286 GCTCTCAACTAAGTTCTGTCTATTTTG 58.561 37.037 0.00 0.00 0.00 2.44
2679 5656 8.974060 AGTTCTGTCTATTTTGAAAGTGGTAA 57.026 30.769 0.00 0.00 0.00 2.85
2750 5730 5.938710 TGTTAAATGCATGCATGGAAATTGT 59.061 32.000 32.79 12.58 36.68 2.71
2754 5734 5.968528 ATGCATGCATGGAAATTGTTTTT 57.031 30.435 31.74 3.38 35.03 1.94
2775 5755 6.773976 TTTTTAAGGGTGCATCTCCTATTG 57.226 37.500 0.00 0.00 32.21 1.90
2776 5756 5.450818 TTTAAGGGTGCATCTCCTATTGT 57.549 39.130 0.00 0.00 32.21 2.71
2777 5757 5.450818 TTAAGGGTGCATCTCCTATTGTT 57.549 39.130 0.00 0.00 32.21 2.83
2778 5758 3.287867 AGGGTGCATCTCCTATTGTTG 57.712 47.619 0.00 0.00 0.00 3.33
2779 5759 2.578021 AGGGTGCATCTCCTATTGTTGT 59.422 45.455 0.00 0.00 0.00 3.32
2780 5760 2.684881 GGGTGCATCTCCTATTGTTGTG 59.315 50.000 0.00 0.00 0.00 3.33
2781 5761 2.098117 GGTGCATCTCCTATTGTTGTGC 59.902 50.000 0.00 0.00 0.00 4.57
2782 5762 3.012518 GTGCATCTCCTATTGTTGTGCT 58.987 45.455 0.00 0.00 32.67 4.40
2783 5763 3.064545 GTGCATCTCCTATTGTTGTGCTC 59.935 47.826 0.00 0.00 32.67 4.26
2784 5764 3.273434 GCATCTCCTATTGTTGTGCTCA 58.727 45.455 0.00 0.00 0.00 4.26
2785 5765 3.881688 GCATCTCCTATTGTTGTGCTCAT 59.118 43.478 0.00 0.00 0.00 2.90
2786 5766 5.059161 GCATCTCCTATTGTTGTGCTCATA 58.941 41.667 0.00 0.00 0.00 2.15
2787 5767 5.704515 GCATCTCCTATTGTTGTGCTCATAT 59.295 40.000 0.00 0.00 0.00 1.78
2788 5768 6.875726 GCATCTCCTATTGTTGTGCTCATATA 59.124 38.462 0.00 0.00 0.00 0.86
2789 5769 7.551974 GCATCTCCTATTGTTGTGCTCATATAT 59.448 37.037 0.00 0.00 0.00 0.86
2832 5812 9.595357 GTTTATCGCTTATTTTCCTATGTTAGC 57.405 33.333 0.00 0.00 0.00 3.09
2833 5813 8.896320 TTATCGCTTATTTTCCTATGTTAGCA 57.104 30.769 0.00 0.00 0.00 3.49
2834 5814 7.986085 ATCGCTTATTTTCCTATGTTAGCAT 57.014 32.000 0.00 0.00 39.03 3.79
2835 5815 7.189693 TCGCTTATTTTCCTATGTTAGCATG 57.810 36.000 1.80 0.00 36.58 4.06
2836 5816 6.989759 TCGCTTATTTTCCTATGTTAGCATGA 59.010 34.615 1.80 0.00 36.58 3.07
2837 5817 7.497579 TCGCTTATTTTCCTATGTTAGCATGAA 59.502 33.333 1.80 0.00 36.58 2.57
2838 5818 8.292448 CGCTTATTTTCCTATGTTAGCATGAAT 58.708 33.333 1.80 0.00 36.58 2.57
2851 5831 7.471721 TGTTAGCATGAATATGTTTTTCTCCG 58.528 34.615 0.00 0.00 36.65 4.63
2852 5832 5.505173 AGCATGAATATGTTTTTCTCCGG 57.495 39.130 0.00 0.00 36.65 5.14
2853 5833 4.339247 AGCATGAATATGTTTTTCTCCGGG 59.661 41.667 0.00 0.00 36.65 5.73
2854 5834 4.097892 GCATGAATATGTTTTTCTCCGGGT 59.902 41.667 0.00 0.00 36.65 5.28
2855 5835 5.733373 GCATGAATATGTTTTTCTCCGGGTC 60.733 44.000 0.00 0.00 36.65 4.46
2856 5836 5.174037 TGAATATGTTTTTCTCCGGGTCT 57.826 39.130 0.00 0.00 0.00 3.85
2857 5837 5.566469 TGAATATGTTTTTCTCCGGGTCTT 58.434 37.500 0.00 0.00 0.00 3.01
2858 5838 6.713276 TGAATATGTTTTTCTCCGGGTCTTA 58.287 36.000 0.00 0.00 0.00 2.10
2859 5839 6.821665 TGAATATGTTTTTCTCCGGGTCTTAG 59.178 38.462 0.00 0.00 0.00 2.18
2860 5840 3.412237 TGTTTTTCTCCGGGTCTTAGG 57.588 47.619 0.00 0.00 0.00 2.69
2861 5841 2.707257 TGTTTTTCTCCGGGTCTTAGGT 59.293 45.455 0.00 0.00 0.00 3.08
2862 5842 3.903090 TGTTTTTCTCCGGGTCTTAGGTA 59.097 43.478 0.00 0.00 0.00 3.08
2863 5843 4.020839 TGTTTTTCTCCGGGTCTTAGGTAG 60.021 45.833 0.00 0.00 0.00 3.18
2864 5844 3.744940 TTTCTCCGGGTCTTAGGTAGA 57.255 47.619 0.00 0.00 0.00 2.59
2865 5845 3.744940 TTCTCCGGGTCTTAGGTAGAA 57.255 47.619 0.00 0.00 33.81 2.10
2866 5846 3.744940 TCTCCGGGTCTTAGGTAGAAA 57.255 47.619 0.00 0.00 33.81 2.52
2867 5847 4.051661 TCTCCGGGTCTTAGGTAGAAAA 57.948 45.455 0.00 0.00 33.81 2.29
2868 5848 4.617593 TCTCCGGGTCTTAGGTAGAAAAT 58.382 43.478 0.00 0.00 33.81 1.82
2869 5849 5.769835 TCTCCGGGTCTTAGGTAGAAAATA 58.230 41.667 0.00 0.00 33.81 1.40
2870 5850 5.832060 TCTCCGGGTCTTAGGTAGAAAATAG 59.168 44.000 0.00 0.00 33.81 1.73
2871 5851 4.897670 TCCGGGTCTTAGGTAGAAAATAGG 59.102 45.833 0.00 0.00 33.81 2.57
2872 5852 4.897670 CCGGGTCTTAGGTAGAAAATAGGA 59.102 45.833 0.00 0.00 33.81 2.94
2873 5853 5.364735 CCGGGTCTTAGGTAGAAAATAGGAA 59.635 44.000 0.00 0.00 33.81 3.36
2874 5854 6.042897 CCGGGTCTTAGGTAGAAAATAGGAAT 59.957 42.308 0.00 0.00 33.81 3.01
2875 5855 6.929606 CGGGTCTTAGGTAGAAAATAGGAATG 59.070 42.308 0.00 0.00 33.81 2.67
2876 5856 6.711194 GGGTCTTAGGTAGAAAATAGGAATGC 59.289 42.308 0.00 0.00 33.81 3.56
2877 5857 7.420330 GGGTCTTAGGTAGAAAATAGGAATGCT 60.420 40.741 0.00 0.00 33.81 3.79
2878 5858 7.442666 GGTCTTAGGTAGAAAATAGGAATGCTG 59.557 40.741 0.00 0.00 33.81 4.41
2879 5859 7.988028 GTCTTAGGTAGAAAATAGGAATGCTGT 59.012 37.037 0.00 0.00 33.81 4.40
2880 5860 7.987458 TCTTAGGTAGAAAATAGGAATGCTGTG 59.013 37.037 0.00 0.00 0.00 3.66
2881 5861 6.067217 AGGTAGAAAATAGGAATGCTGTGT 57.933 37.500 0.00 0.00 0.00 3.72
2882 5862 5.882557 AGGTAGAAAATAGGAATGCTGTGTG 59.117 40.000 0.00 0.00 0.00 3.82
2883 5863 5.648092 GGTAGAAAATAGGAATGCTGTGTGT 59.352 40.000 0.00 0.00 0.00 3.72
2884 5864 5.633830 AGAAAATAGGAATGCTGTGTGTG 57.366 39.130 0.00 0.00 0.00 3.82
2885 5865 3.855689 AAATAGGAATGCTGTGTGTGC 57.144 42.857 0.00 0.00 0.00 4.57
2886 5866 1.755179 ATAGGAATGCTGTGTGTGCC 58.245 50.000 0.00 0.00 0.00 5.01
2887 5867 0.692476 TAGGAATGCTGTGTGTGCCT 59.308 50.000 0.00 0.00 0.00 4.75
2888 5868 0.607489 AGGAATGCTGTGTGTGCCTC 60.607 55.000 0.00 0.00 0.00 4.70
2889 5869 0.890542 GGAATGCTGTGTGTGCCTCA 60.891 55.000 0.00 0.00 0.00 3.86
2890 5870 1.171308 GAATGCTGTGTGTGCCTCAT 58.829 50.000 0.00 0.00 0.00 2.90
2891 5871 1.542915 GAATGCTGTGTGTGCCTCATT 59.457 47.619 0.00 0.00 0.00 2.57
2892 5872 0.885879 ATGCTGTGTGTGCCTCATTG 59.114 50.000 0.00 0.00 0.00 2.82
2893 5873 0.466007 TGCTGTGTGTGCCTCATTGT 60.466 50.000 0.00 0.00 0.00 2.71
2894 5874 0.670162 GCTGTGTGTGCCTCATTGTT 59.330 50.000 0.00 0.00 0.00 2.83
2895 5875 1.601162 GCTGTGTGTGCCTCATTGTTG 60.601 52.381 0.00 0.00 0.00 3.33
2896 5876 1.677576 CTGTGTGTGCCTCATTGTTGT 59.322 47.619 0.00 0.00 0.00 3.32
2897 5877 1.675483 TGTGTGTGCCTCATTGTTGTC 59.325 47.619 0.00 0.00 0.00 3.18
2898 5878 1.675483 GTGTGTGCCTCATTGTTGTCA 59.325 47.619 0.00 0.00 0.00 3.58
2899 5879 2.294233 GTGTGTGCCTCATTGTTGTCAT 59.706 45.455 0.00 0.00 0.00 3.06
2900 5880 2.553602 TGTGTGCCTCATTGTTGTCATC 59.446 45.455 0.00 0.00 0.00 2.92
2901 5881 2.816087 GTGTGCCTCATTGTTGTCATCT 59.184 45.455 0.00 0.00 0.00 2.90
2902 5882 3.254166 GTGTGCCTCATTGTTGTCATCTT 59.746 43.478 0.00 0.00 0.00 2.40
2903 5883 3.253921 TGTGCCTCATTGTTGTCATCTTG 59.746 43.478 0.00 0.00 0.00 3.02
2904 5884 2.821378 TGCCTCATTGTTGTCATCTTGG 59.179 45.455 0.00 0.00 0.00 3.61
2905 5885 2.416431 GCCTCATTGTTGTCATCTTGGC 60.416 50.000 0.00 0.00 0.00 4.52
2906 5886 3.087031 CCTCATTGTTGTCATCTTGGCT 58.913 45.455 0.00 0.00 0.00 4.75
2907 5887 3.128242 CCTCATTGTTGTCATCTTGGCTC 59.872 47.826 0.00 0.00 0.00 4.70
2908 5888 4.008330 CTCATTGTTGTCATCTTGGCTCT 58.992 43.478 0.00 0.00 0.00 4.09
2909 5889 4.401022 TCATTGTTGTCATCTTGGCTCTT 58.599 39.130 0.00 0.00 0.00 2.85
2910 5890 4.456911 TCATTGTTGTCATCTTGGCTCTTC 59.543 41.667 0.00 0.00 0.00 2.87
2911 5891 2.783135 TGTTGTCATCTTGGCTCTTCC 58.217 47.619 0.00 0.00 0.00 3.46
2912 5892 2.373169 TGTTGTCATCTTGGCTCTTCCT 59.627 45.455 0.00 0.00 35.26 3.36
2913 5893 3.582647 TGTTGTCATCTTGGCTCTTCCTA 59.417 43.478 0.00 0.00 35.26 2.94
2914 5894 4.225942 TGTTGTCATCTTGGCTCTTCCTAT 59.774 41.667 0.00 0.00 35.26 2.57
2915 5895 5.189180 GTTGTCATCTTGGCTCTTCCTATT 58.811 41.667 0.00 0.00 35.26 1.73
2916 5896 5.441718 TGTCATCTTGGCTCTTCCTATTT 57.558 39.130 0.00 0.00 35.26 1.40
2917 5897 5.819991 TGTCATCTTGGCTCTTCCTATTTT 58.180 37.500 0.00 0.00 35.26 1.82
2918 5898 5.882557 TGTCATCTTGGCTCTTCCTATTTTC 59.117 40.000 0.00 0.00 35.26 2.29
2919 5899 5.007136 GTCATCTTGGCTCTTCCTATTTTCG 59.993 44.000 0.00 0.00 35.26 3.46
2920 5900 4.819105 TCTTGGCTCTTCCTATTTTCGA 57.181 40.909 0.00 0.00 35.26 3.71
2921 5901 4.759782 TCTTGGCTCTTCCTATTTTCGAG 58.240 43.478 0.00 0.00 35.26 4.04
2922 5902 3.543680 TGGCTCTTCCTATTTTCGAGG 57.456 47.619 0.00 0.00 35.26 4.63
2923 5903 3.104512 TGGCTCTTCCTATTTTCGAGGA 58.895 45.455 0.00 0.00 41.52 3.71
2924 5904 3.711704 TGGCTCTTCCTATTTTCGAGGAT 59.288 43.478 0.00 0.00 42.75 3.24
2925 5905 4.164221 TGGCTCTTCCTATTTTCGAGGATT 59.836 41.667 0.00 0.00 42.75 3.01
2926 5906 5.365605 TGGCTCTTCCTATTTTCGAGGATTA 59.634 40.000 0.00 0.00 42.75 1.75
2927 5907 6.043243 TGGCTCTTCCTATTTTCGAGGATTAT 59.957 38.462 0.00 0.00 42.75 1.28
2928 5908 6.370166 GGCTCTTCCTATTTTCGAGGATTATG 59.630 42.308 0.00 0.00 42.75 1.90
2929 5909 6.128418 GCTCTTCCTATTTTCGAGGATTATGC 60.128 42.308 0.00 0.00 42.75 3.14
2930 5910 7.067496 TCTTCCTATTTTCGAGGATTATGCT 57.933 36.000 0.00 0.00 42.75 3.79
2931 5911 6.931281 TCTTCCTATTTTCGAGGATTATGCTG 59.069 38.462 0.00 0.00 42.75 4.41
2932 5912 6.174720 TCCTATTTTCGAGGATTATGCTGT 57.825 37.500 0.00 0.00 38.22 4.40
2933 5913 7.297936 TCCTATTTTCGAGGATTATGCTGTA 57.702 36.000 0.00 0.00 38.22 2.74
2934 5914 7.152645 TCCTATTTTCGAGGATTATGCTGTAC 58.847 38.462 0.00 0.00 38.22 2.90
2935 5915 7.015292 TCCTATTTTCGAGGATTATGCTGTACT 59.985 37.037 0.00 0.00 38.22 2.73
2936 5916 8.304596 CCTATTTTCGAGGATTATGCTGTACTA 58.695 37.037 0.00 0.00 35.99 1.82
2937 5917 9.862371 CTATTTTCGAGGATTATGCTGTACTAT 57.138 33.333 0.00 0.00 0.00 2.12
2938 5918 8.764524 ATTTTCGAGGATTATGCTGTACTATC 57.235 34.615 0.00 0.00 0.00 2.08
2939 5919 6.894339 TTCGAGGATTATGCTGTACTATCA 57.106 37.500 0.00 0.00 0.00 2.15
2940 5920 6.502136 TCGAGGATTATGCTGTACTATCAG 57.498 41.667 0.00 0.00 38.35 2.90
2941 5921 6.004574 TCGAGGATTATGCTGTACTATCAGT 58.995 40.000 0.00 0.00 37.70 3.41
2942 5922 6.149640 TCGAGGATTATGCTGTACTATCAGTC 59.850 42.308 0.00 0.00 37.70 3.51
2943 5923 6.072452 CGAGGATTATGCTGTACTATCAGTCA 60.072 42.308 0.00 0.00 37.70 3.41
2944 5924 7.362487 CGAGGATTATGCTGTACTATCAGTCAT 60.362 40.741 0.00 0.00 37.70 3.06
2945 5925 7.609960 AGGATTATGCTGTACTATCAGTCATG 58.390 38.462 0.00 0.00 37.70 3.07
2946 5926 7.234371 AGGATTATGCTGTACTATCAGTCATGT 59.766 37.037 0.00 0.00 37.70 3.21
2947 5927 7.875041 GGATTATGCTGTACTATCAGTCATGTT 59.125 37.037 0.00 0.00 37.70 2.71
2948 5928 8.824159 ATTATGCTGTACTATCAGTCATGTTC 57.176 34.615 0.00 0.00 37.70 3.18
2949 5929 5.011090 TGCTGTACTATCAGTCATGTTCC 57.989 43.478 0.00 0.00 37.70 3.62
2950 5930 4.711846 TGCTGTACTATCAGTCATGTTCCT 59.288 41.667 0.00 0.00 37.70 3.36
2951 5931 5.187772 TGCTGTACTATCAGTCATGTTCCTT 59.812 40.000 0.00 0.00 37.70 3.36
2952 5932 6.109359 GCTGTACTATCAGTCATGTTCCTTT 58.891 40.000 0.00 0.00 37.70 3.11
2953 5933 6.256757 GCTGTACTATCAGTCATGTTCCTTTC 59.743 42.308 0.00 0.00 37.70 2.62
2954 5934 7.239763 TGTACTATCAGTCATGTTCCTTTCA 57.760 36.000 0.00 0.00 0.00 2.69
2955 5935 7.323420 TGTACTATCAGTCATGTTCCTTTCAG 58.677 38.462 0.00 0.00 0.00 3.02
2956 5936 6.365970 ACTATCAGTCATGTTCCTTTCAGT 57.634 37.500 0.00 0.00 0.00 3.41
2957 5937 7.482169 ACTATCAGTCATGTTCCTTTCAGTA 57.518 36.000 0.00 0.00 0.00 2.74
2958 5938 7.907389 ACTATCAGTCATGTTCCTTTCAGTAA 58.093 34.615 0.00 0.00 0.00 2.24
2959 5939 8.375506 ACTATCAGTCATGTTCCTTTCAGTAAA 58.624 33.333 0.00 0.00 0.00 2.01
2960 5940 9.388506 CTATCAGTCATGTTCCTTTCAGTAAAT 57.611 33.333 0.00 0.00 0.00 1.40
2961 5941 8.641498 ATCAGTCATGTTCCTTTCAGTAAATT 57.359 30.769 0.00 0.00 0.00 1.82
2962 5942 9.739276 ATCAGTCATGTTCCTTTCAGTAAATTA 57.261 29.630 0.00 0.00 0.00 1.40
2963 5943 8.999431 TCAGTCATGTTCCTTTCAGTAAATTAC 58.001 33.333 0.00 0.00 0.00 1.89
2964 5944 8.783093 CAGTCATGTTCCTTTCAGTAAATTACA 58.217 33.333 5.89 0.00 0.00 2.41
2965 5945 8.784043 AGTCATGTTCCTTTCAGTAAATTACAC 58.216 33.333 5.89 0.00 0.00 2.90
2966 5946 8.784043 GTCATGTTCCTTTCAGTAAATTACACT 58.216 33.333 5.89 0.00 0.00 3.55
2967 5947 9.349713 TCATGTTCCTTTCAGTAAATTACACTT 57.650 29.630 5.89 0.00 0.00 3.16
2968 5948 9.965824 CATGTTCCTTTCAGTAAATTACACTTT 57.034 29.630 5.89 0.00 0.00 2.66
2969 5949 9.965824 ATGTTCCTTTCAGTAAATTACACTTTG 57.034 29.630 5.89 0.00 0.00 2.77
2970 5950 8.410141 TGTTCCTTTCAGTAAATTACACTTTGG 58.590 33.333 5.89 2.72 0.00 3.28
2971 5951 8.626526 GTTCCTTTCAGTAAATTACACTTTGGA 58.373 33.333 5.89 4.86 0.00 3.53
2972 5952 8.934023 TCCTTTCAGTAAATTACACTTTGGAT 57.066 30.769 5.89 0.00 0.00 3.41
2973 5953 9.010029 TCCTTTCAGTAAATTACACTTTGGATC 57.990 33.333 5.89 0.00 0.00 3.36
2974 5954 8.792633 CCTTTCAGTAAATTACACTTTGGATCA 58.207 33.333 5.89 0.00 0.00 2.92
2975 5955 9.612620 CTTTCAGTAAATTACACTTTGGATCAC 57.387 33.333 5.89 0.00 0.00 3.06
2976 5956 7.359262 TCAGTAAATTACACTTTGGATCACG 57.641 36.000 5.89 0.00 0.00 4.35
2977 5957 6.932400 TCAGTAAATTACACTTTGGATCACGT 59.068 34.615 5.89 0.00 0.00 4.49
2978 5958 8.089597 TCAGTAAATTACACTTTGGATCACGTA 58.910 33.333 5.89 0.00 0.00 3.57
2979 5959 8.879759 CAGTAAATTACACTTTGGATCACGTAT 58.120 33.333 5.89 0.00 0.00 3.06
2980 5960 9.444600 AGTAAATTACACTTTGGATCACGTATT 57.555 29.630 5.89 0.00 0.00 1.89
2983 5963 4.921470 ACACTTTGGATCACGTATTTCG 57.079 40.909 0.00 0.00 46.00 3.46
2984 5964 4.562082 ACACTTTGGATCACGTATTTCGA 58.438 39.130 0.00 0.00 42.86 3.71
2985 5965 4.387862 ACACTTTGGATCACGTATTTCGAC 59.612 41.667 0.00 0.00 42.86 4.20
2986 5966 3.930848 ACTTTGGATCACGTATTTCGACC 59.069 43.478 0.00 0.00 42.86 4.79
2987 5967 2.589798 TGGATCACGTATTTCGACCC 57.410 50.000 0.00 0.00 42.86 4.46
2988 5968 1.202325 TGGATCACGTATTTCGACCCG 60.202 52.381 0.00 0.00 42.86 5.28
2989 5969 1.066002 GGATCACGTATTTCGACCCGA 59.934 52.381 0.00 0.00 42.86 5.14
2990 5970 2.382519 GATCACGTATTTCGACCCGAG 58.617 52.381 0.00 0.00 42.86 4.63
2991 5971 1.167851 TCACGTATTTCGACCCGAGT 58.832 50.000 0.00 0.00 42.86 4.18
2992 5972 1.541147 TCACGTATTTCGACCCGAGTT 59.459 47.619 0.00 0.00 42.86 3.01
2993 5973 1.652124 CACGTATTTCGACCCGAGTTG 59.348 52.381 0.00 0.00 42.86 3.16
2994 5974 0.643820 CGTATTTCGACCCGAGTTGC 59.356 55.000 0.00 0.00 42.86 4.17
2995 5975 1.717194 GTATTTCGACCCGAGTTGCA 58.283 50.000 0.00 0.00 37.14 4.08
2996 5976 2.070783 GTATTTCGACCCGAGTTGCAA 58.929 47.619 0.00 0.00 37.14 4.08
2997 5977 1.821216 ATTTCGACCCGAGTTGCAAT 58.179 45.000 0.59 0.00 37.14 3.56
2998 5978 1.600023 TTTCGACCCGAGTTGCAATT 58.400 45.000 0.59 0.00 37.14 2.32
2999 5979 1.153353 TTCGACCCGAGTTGCAATTC 58.847 50.000 11.69 11.69 37.14 2.17
3000 5980 0.320374 TCGACCCGAGTTGCAATTCT 59.680 50.000 18.43 4.84 0.00 2.40
3001 5981 0.443869 CGACCCGAGTTGCAATTCTG 59.556 55.000 18.43 12.49 0.00 3.02
3019 5999 9.403110 GCAATTCTGCCACATTAGATAAAATAG 57.597 33.333 0.00 0.00 43.26 1.73
3039 6019 8.709386 AAATAGATATTACAGATAGCTTGGCG 57.291 34.615 0.00 0.00 0.00 5.69
3040 6020 4.499183 AGATATTACAGATAGCTTGGCGC 58.501 43.478 0.00 0.00 39.57 6.53
3041 6021 1.884235 ATTACAGATAGCTTGGCGCC 58.116 50.000 22.73 22.73 40.39 6.53
3042 6022 0.179056 TTACAGATAGCTTGGCGCCC 60.179 55.000 26.77 8.84 40.39 6.13
3043 6023 1.048724 TACAGATAGCTTGGCGCCCT 61.049 55.000 26.77 16.82 40.39 5.19
3044 6024 1.890979 CAGATAGCTTGGCGCCCTG 60.891 63.158 26.77 17.92 40.39 4.45
3045 6025 2.066393 AGATAGCTTGGCGCCCTGA 61.066 57.895 26.77 9.20 40.39 3.86
3046 6026 1.153168 GATAGCTTGGCGCCCTGAA 60.153 57.895 26.77 11.15 40.39 3.02
3047 6027 0.536006 GATAGCTTGGCGCCCTGAAT 60.536 55.000 26.77 11.16 40.39 2.57
3048 6028 0.106519 ATAGCTTGGCGCCCTGAATT 60.107 50.000 26.77 7.26 40.39 2.17
3049 6029 0.323360 TAGCTTGGCGCCCTGAATTT 60.323 50.000 26.77 5.52 40.39 1.82
3050 6030 0.323360 AGCTTGGCGCCCTGAATTTA 60.323 50.000 26.77 0.00 40.39 1.40
3051 6031 0.101219 GCTTGGCGCCCTGAATTTAG 59.899 55.000 26.77 9.04 0.00 1.85
3052 6032 1.750193 CTTGGCGCCCTGAATTTAGA 58.250 50.000 26.77 0.00 0.00 2.10
3053 6033 1.672881 CTTGGCGCCCTGAATTTAGAG 59.327 52.381 26.77 2.24 0.00 2.43
3054 6034 0.618458 TGGCGCCCTGAATTTAGAGT 59.382 50.000 26.77 0.00 0.00 3.24
3055 6035 1.300481 GGCGCCCTGAATTTAGAGTC 58.700 55.000 18.11 0.00 0.00 3.36
3056 6036 1.406887 GGCGCCCTGAATTTAGAGTCA 60.407 52.381 18.11 0.00 0.00 3.41
3057 6037 1.936547 GCGCCCTGAATTTAGAGTCAG 59.063 52.381 3.85 3.85 45.19 3.51
3065 6045 6.976636 CTGAATTTAGAGTCAGGAAGTTCC 57.023 41.667 14.54 14.54 42.66 3.62
3066 6046 6.433847 TGAATTTAGAGTCAGGAAGTTCCA 57.566 37.500 23.87 0.79 39.61 3.53
3067 6047 7.020827 TGAATTTAGAGTCAGGAAGTTCCAT 57.979 36.000 23.87 6.66 39.61 3.41
3068 6048 7.106239 TGAATTTAGAGTCAGGAAGTTCCATC 58.894 38.462 23.87 14.76 39.61 3.51
3069 6049 5.422214 TTTAGAGTCAGGAAGTTCCATCC 57.578 43.478 23.87 10.22 39.61 3.51
3070 6050 2.192263 AGAGTCAGGAAGTTCCATCCC 58.808 52.381 23.87 8.49 39.61 3.85
3071 6051 2.192263 GAGTCAGGAAGTTCCATCCCT 58.808 52.381 23.87 12.93 39.61 4.20
3072 6052 2.573915 GAGTCAGGAAGTTCCATCCCTT 59.426 50.000 23.87 4.20 39.61 3.95
3073 6053 2.989571 AGTCAGGAAGTTCCATCCCTTT 59.010 45.455 23.87 0.00 39.61 3.11
3074 6054 3.399305 AGTCAGGAAGTTCCATCCCTTTT 59.601 43.478 23.87 0.00 39.61 2.27
3075 6055 3.759086 GTCAGGAAGTTCCATCCCTTTTC 59.241 47.826 23.87 0.65 39.61 2.29
3076 6056 3.657727 TCAGGAAGTTCCATCCCTTTTCT 59.342 43.478 23.87 0.00 39.61 2.52
3077 6057 4.106341 TCAGGAAGTTCCATCCCTTTTCTT 59.894 41.667 23.87 0.00 39.61 2.52
3078 6058 4.835056 CAGGAAGTTCCATCCCTTTTCTTT 59.165 41.667 23.87 0.00 39.61 2.52
3079 6059 5.305386 CAGGAAGTTCCATCCCTTTTCTTTT 59.695 40.000 23.87 0.00 39.61 2.27
3080 6060 5.905331 AGGAAGTTCCATCCCTTTTCTTTTT 59.095 36.000 23.87 0.00 39.61 1.94
3081 6061 6.042093 AGGAAGTTCCATCCCTTTTCTTTTTC 59.958 38.462 23.87 0.00 39.61 2.29
3082 6062 5.808366 AGTTCCATCCCTTTTCTTTTTCC 57.192 39.130 0.00 0.00 0.00 3.13
3083 6063 5.215845 AGTTCCATCCCTTTTCTTTTTCCA 58.784 37.500 0.00 0.00 0.00 3.53
3084 6064 5.305386 AGTTCCATCCCTTTTCTTTTTCCAG 59.695 40.000 0.00 0.00 0.00 3.86
3085 6065 4.159557 TCCATCCCTTTTCTTTTTCCAGG 58.840 43.478 0.00 0.00 0.00 4.45
3086 6066 4.140805 TCCATCCCTTTTCTTTTTCCAGGA 60.141 41.667 0.00 0.00 0.00 3.86
3087 6067 4.779489 CCATCCCTTTTCTTTTTCCAGGAT 59.221 41.667 0.00 0.00 33.14 3.24
3088 6068 5.337813 CCATCCCTTTTCTTTTTCCAGGATG 60.338 44.000 8.41 8.41 45.90 3.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
14 15 0.606944 TGAACCCCCAACCGAAATCG 60.607 55.000 0.00 0.00 39.44 3.34
15 16 1.173913 CTGAACCCCCAACCGAAATC 58.826 55.000 0.00 0.00 0.00 2.17
17 18 0.774908 ATCTGAACCCCCAACCGAAA 59.225 50.000 0.00 0.00 0.00 3.46
18 19 0.326927 GATCTGAACCCCCAACCGAA 59.673 55.000 0.00 0.00 0.00 4.30
19 20 1.559065 GGATCTGAACCCCCAACCGA 61.559 60.000 0.00 0.00 0.00 4.69
20 21 1.077716 GGATCTGAACCCCCAACCG 60.078 63.158 0.00 0.00 0.00 4.44
22 23 2.083715 TGGGATCTGAACCCCCAAC 58.916 57.895 19.16 0.00 46.40 3.77
23 24 4.700887 TGGGATCTGAACCCCCAA 57.299 55.556 19.16 0.00 46.40 4.12
25 26 1.076705 GCTTGGGATCTGAACCCCC 60.077 63.158 19.16 12.27 46.21 5.40
26 27 1.452108 CGCTTGGGATCTGAACCCC 60.452 63.158 19.16 14.58 46.21 4.95
27 28 1.452108 CCGCTTGGGATCTGAACCC 60.452 63.158 15.62 15.62 46.87 4.11
37 38 2.182030 GAGTCGAGTCCGCTTGGG 59.818 66.667 9.22 0.00 35.37 4.12
38 39 2.196382 TTCGAGTCGAGTCCGCTTGG 62.196 60.000 15.88 0.00 37.14 3.61
40 41 0.313043 TTTTCGAGTCGAGTCCGCTT 59.687 50.000 15.88 0.00 37.14 4.68
41 42 0.109689 CTTTTCGAGTCGAGTCCGCT 60.110 55.000 15.88 0.00 37.14 5.52
42 43 1.071567 CCTTTTCGAGTCGAGTCCGC 61.072 60.000 15.88 0.00 37.14 5.54
43 44 0.520404 TCCTTTTCGAGTCGAGTCCG 59.480 55.000 15.88 9.75 37.14 4.79
44 45 1.733061 GCTCCTTTTCGAGTCGAGTCC 60.733 57.143 15.88 0.00 37.14 3.85
45 46 1.200484 AGCTCCTTTTCGAGTCGAGTC 59.800 52.381 15.88 10.37 37.14 3.36
46 47 1.200484 GAGCTCCTTTTCGAGTCGAGT 59.800 52.381 15.88 0.00 37.14 4.18
47 48 1.470890 AGAGCTCCTTTTCGAGTCGAG 59.529 52.381 15.88 4.20 37.14 4.04
48 49 1.535833 AGAGCTCCTTTTCGAGTCGA 58.464 50.000 12.09 12.09 32.11 4.20
49 50 2.355717 AAGAGCTCCTTTTCGAGTCG 57.644 50.000 10.93 6.09 32.11 4.18
57 58 8.427902 AGGATTTGAATAAAAAGAGCTCCTTT 57.572 30.769 10.93 12.89 46.47 3.11
59 60 6.317391 CGAGGATTTGAATAAAAAGAGCTCCT 59.683 38.462 10.93 0.00 32.97 3.69
60 61 6.316390 TCGAGGATTTGAATAAAAAGAGCTCC 59.684 38.462 10.93 0.00 0.00 4.70
61 62 7.183433 GTCGAGGATTTGAATAAAAAGAGCTC 58.817 38.462 5.27 5.27 0.00 4.09
63 64 6.094186 AGGTCGAGGATTTGAATAAAAAGAGC 59.906 38.462 0.00 0.00 0.00 4.09
66 67 7.377766 TCAGGTCGAGGATTTGAATAAAAAG 57.622 36.000 0.00 0.00 0.00 2.27
68 69 6.985188 CTCAGGTCGAGGATTTGAATAAAA 57.015 37.500 0.00 0.00 38.18 1.52
81 82 0.754957 AGCATCTCCCTCAGGTCGAG 60.755 60.000 0.00 0.00 41.89 4.04
82 83 0.753479 GAGCATCTCCCTCAGGTCGA 60.753 60.000 0.00 0.00 0.00 4.20
83 84 1.739049 GAGCATCTCCCTCAGGTCG 59.261 63.158 0.00 0.00 0.00 4.79
95 96 4.759183 GGTTCCAATCCTGATTAGAGCATC 59.241 45.833 5.02 0.00 0.00 3.91
96 97 4.723309 GGTTCCAATCCTGATTAGAGCAT 58.277 43.478 5.02 0.00 0.00 3.79
97 98 3.432186 CGGTTCCAATCCTGATTAGAGCA 60.432 47.826 5.02 0.00 0.00 4.26
99 100 4.672587 TCGGTTCCAATCCTGATTAGAG 57.327 45.455 0.00 0.00 0.00 2.43
100 101 5.429681 TTTCGGTTCCAATCCTGATTAGA 57.570 39.130 0.00 0.00 0.00 2.10
101 102 6.238759 GGATTTTCGGTTCCAATCCTGATTAG 60.239 42.308 10.36 0.00 41.94 1.73
102 103 5.592688 GGATTTTCGGTTCCAATCCTGATTA 59.407 40.000 10.36 0.00 41.94 1.75
103 104 4.402474 GGATTTTCGGTTCCAATCCTGATT 59.598 41.667 10.36 0.00 41.94 2.57
104 105 3.954258 GGATTTTCGGTTCCAATCCTGAT 59.046 43.478 10.36 0.00 41.94 2.90
106 107 2.097466 CGGATTTTCGGTTCCAATCCTG 59.903 50.000 13.71 7.07 42.70 3.86
108 109 2.089201 ACGGATTTTCGGTTCCAATCC 58.911 47.619 8.49 8.49 41.82 3.01
109 110 2.096980 GGACGGATTTTCGGTTCCAATC 59.903 50.000 0.00 0.00 29.69 2.67
110 111 2.089201 GGACGGATTTTCGGTTCCAAT 58.911 47.619 0.00 0.00 29.69 3.16
112 113 0.671163 CGGACGGATTTTCGGTTCCA 60.671 55.000 0.00 0.00 29.69 3.53
113 114 0.671472 ACGGACGGATTTTCGGTTCC 60.671 55.000 0.00 0.00 29.69 3.62
114 115 1.994916 TACGGACGGATTTTCGGTTC 58.005 50.000 0.00 0.00 29.69 3.62
116 117 2.453983 TTTACGGACGGATTTTCGGT 57.546 45.000 0.00 0.00 32.36 4.69
117 118 2.286025 GGATTTACGGACGGATTTTCGG 59.714 50.000 0.00 0.00 0.00 4.30
118 119 2.931325 TGGATTTACGGACGGATTTTCG 59.069 45.455 0.00 0.00 0.00 3.46
120 121 5.920903 TCTATGGATTTACGGACGGATTTT 58.079 37.500 0.00 0.00 0.00 1.82
124 125 6.653526 TTATTCTATGGATTTACGGACGGA 57.346 37.500 0.00 0.00 0.00 4.69
148 149 0.773644 TCCTCTGAGGCTGCCTTTTT 59.226 50.000 24.26 0.00 34.61 1.94
149 150 0.327591 CTCCTCTGAGGCTGCCTTTT 59.672 55.000 24.26 0.00 34.61 2.27
150 151 1.989620 CTCCTCTGAGGCTGCCTTT 59.010 57.895 24.26 0.05 34.61 3.11
151 152 2.668120 GCTCCTCTGAGGCTGCCTT 61.668 63.158 24.26 6.49 39.14 4.35
152 153 3.082701 GCTCCTCTGAGGCTGCCT 61.083 66.667 23.64 23.64 39.14 4.75
154 155 1.744741 GTTGCTCCTCTGAGGCTGC 60.745 63.158 24.61 24.61 39.14 5.25
155 156 1.078567 GGTTGCTCCTCTGAGGCTG 60.079 63.158 19.08 14.27 39.14 4.85
156 157 1.537397 TGGTTGCTCCTCTGAGGCT 60.537 57.895 19.08 0.00 39.14 4.58
157 158 1.078567 CTGGTTGCTCCTCTGAGGC 60.079 63.158 19.08 8.81 39.14 4.70
158 159 1.601171 CCTGGTTGCTCCTCTGAGG 59.399 63.158 17.84 17.84 39.14 3.86
159 160 1.078567 GCCTGGTTGCTCCTCTGAG 60.079 63.158 0.00 0.00 41.84 3.35
161 162 2.045536 GGCCTGGTTGCTCCTCTG 60.046 66.667 0.00 0.00 37.07 3.35
163 164 1.676967 CAAGGCCTGGTTGCTCCTC 60.677 63.158 5.69 0.00 37.07 3.71
165 166 3.376918 GCAAGGCCTGGTTGCTCC 61.377 66.667 18.80 0.00 45.67 4.70
166 167 3.741476 CGCAAGGCCTGGTTGCTC 61.741 66.667 22.36 0.00 46.73 4.26
169 170 2.824071 GATTGCGCAAGGCCTGGTTG 62.824 60.000 28.62 1.09 42.61 3.77
170 171 2.601367 ATTGCGCAAGGCCTGGTT 60.601 55.556 28.62 5.83 42.61 3.67
171 172 3.064324 GATTGCGCAAGGCCTGGT 61.064 61.111 28.62 9.63 42.61 4.00
172 173 4.183686 CGATTGCGCAAGGCCTGG 62.184 66.667 28.62 3.35 42.61 4.45
173 174 2.198906 TTTCGATTGCGCAAGGCCTG 62.199 55.000 28.62 15.03 42.61 4.85
174 175 1.926511 CTTTCGATTGCGCAAGGCCT 61.927 55.000 28.62 11.72 42.61 5.19
175 176 1.514873 CTTTCGATTGCGCAAGGCC 60.515 57.895 28.62 17.74 42.61 5.19
176 177 0.522076 CTCTTTCGATTGCGCAAGGC 60.522 55.000 28.62 20.52 40.41 4.35
177 178 1.078709 TCTCTTTCGATTGCGCAAGG 58.921 50.000 28.62 21.52 40.41 3.61
178 179 2.413112 TCTTCTCTTTCGATTGCGCAAG 59.587 45.455 28.62 15.85 41.18 4.01
179 180 2.412870 TCTTCTCTTTCGATTGCGCAA 58.587 42.857 27.24 27.24 37.46 4.85
181 182 3.455619 TTTCTTCTCTTTCGATTGCGC 57.544 42.857 0.00 0.00 37.46 6.09
184 185 5.391416 GGCTCCTTTTCTTCTCTTTCGATTG 60.391 44.000 0.00 0.00 0.00 2.67
185 186 4.697828 GGCTCCTTTTCTTCTCTTTCGATT 59.302 41.667 0.00 0.00 0.00 3.34
186 187 4.257731 GGCTCCTTTTCTTCTCTTTCGAT 58.742 43.478 0.00 0.00 0.00 3.59
188 189 2.413453 CGGCTCCTTTTCTTCTCTTTCG 59.587 50.000 0.00 0.00 0.00 3.46
189 190 3.403968 ACGGCTCCTTTTCTTCTCTTTC 58.596 45.455 0.00 0.00 0.00 2.62
193 194 5.881777 AATAAACGGCTCCTTTTCTTCTC 57.118 39.130 0.00 0.00 0.00 2.87
195 196 8.981724 ATAAAAATAAACGGCTCCTTTTCTTC 57.018 30.769 0.00 0.00 0.00 2.87
229 2810 4.377021 TCTCGTGACACAAACTTTGCTAT 58.623 39.130 6.37 0.00 0.00 2.97
246 2831 9.961264 TCCTAATGATTACTGACTATATCTCGT 57.039 33.333 0.00 0.00 0.00 4.18
258 2843 8.373981 AGGAGAATCACATCCTAATGATTACTG 58.626 37.037 0.00 0.00 44.28 2.74
279 2864 1.210478 GGGCAGCACAAGAATAGGAGA 59.790 52.381 0.00 0.00 0.00 3.71
324 2914 7.596749 TTAGATGGATCAAAGAAGTCGAAAC 57.403 36.000 0.00 0.00 0.00 2.78
350 2940 0.251077 CATTGGCCAGGGATAGCCTC 60.251 60.000 5.11 0.00 0.00 4.70
370 2960 1.604378 CATCTCCCGCAAAGTCCCT 59.396 57.895 0.00 0.00 0.00 4.20
372 2962 0.035439 TTCCATCTCCCGCAAAGTCC 60.035 55.000 0.00 0.00 0.00 3.85
375 2965 1.885887 TGTTTTCCATCTCCCGCAAAG 59.114 47.619 0.00 0.00 0.00 2.77
381 2971 8.190784 CACTTACATTATTGTTTTCCATCTCCC 58.809 37.037 0.00 0.00 37.28 4.30
444 3039 3.131755 GGAAAGAAAATGAGCCTCATGGG 59.868 47.826 8.21 0.00 37.15 4.00
448 3043 4.728772 TCAAGGAAAGAAAATGAGCCTCA 58.271 39.130 0.00 0.00 0.00 3.86
477 3072 3.025866 GCTTTGGCTTTCTGCATCG 57.974 52.632 0.00 0.00 45.15 3.84
492 3087 2.740055 CTTCGTGGCAGCGAGCTT 60.740 61.111 10.95 0.00 44.79 3.74
517 3112 3.563390 GCCTATCAACTTCAGCTTCATCC 59.437 47.826 0.00 0.00 0.00 3.51
519 3114 4.500499 AGCCTATCAACTTCAGCTTCAT 57.500 40.909 0.00 0.00 0.00 2.57
520 3115 3.988976 AGCCTATCAACTTCAGCTTCA 57.011 42.857 0.00 0.00 0.00 3.02
553 3148 4.707448 AGGATGTTGAGTAGAACGTGATCT 59.293 41.667 0.00 0.00 0.00 2.75
560 3155 4.142049 CCTCTCCAGGATGTTGAGTAGAAC 60.142 50.000 0.00 0.00 43.65 3.01
587 3182 1.135046 CTCAAGGCATCTATCGTGCG 58.865 55.000 0.00 0.00 43.40 5.34
593 3188 2.507058 TGCAGGTTCTCAAGGCATCTAT 59.493 45.455 0.00 0.00 0.00 1.98
703 3298 3.705043 ATACGATTAGTGGTGTCGACC 57.295 47.619 14.12 4.20 43.48 4.79
738 3342 1.333931 CAATGATAGCAGCCACAGCAG 59.666 52.381 0.00 0.00 43.56 4.24
756 3360 2.630098 CTCACACTCAGGACCTTCTCAA 59.370 50.000 0.00 0.00 0.00 3.02
757 3361 2.242926 CTCACACTCAGGACCTTCTCA 58.757 52.381 0.00 0.00 0.00 3.27
760 3364 1.633774 TCCTCACACTCAGGACCTTC 58.366 55.000 0.00 0.00 34.91 3.46
774 3378 1.294986 TGGGGATCTCAGGATTCCTCA 59.705 52.381 0.98 0.00 45.03 3.86
784 3388 0.107214 GTTTGCGGATGGGGATCTCA 60.107 55.000 0.00 0.00 0.00 3.27
880 3498 2.175878 ACTCAGCAACATCGAGCTTT 57.824 45.000 0.00 0.00 39.50 3.51
918 3539 5.686841 TCTTCAGTGCATTTCAAACAAATCG 59.313 36.000 0.00 0.00 0.00 3.34
955 3576 0.610509 TTGAAGCGCTTGGGGCATAA 60.611 50.000 30.47 7.89 44.06 1.90
960 3581 1.133025 CAACTATTGAAGCGCTTGGGG 59.867 52.381 30.47 14.58 0.00 4.96
961 3582 1.133025 CCAACTATTGAAGCGCTTGGG 59.867 52.381 30.47 14.22 0.00 4.12
977 3598 1.270550 CAGGACAATCACCAAGCCAAC 59.729 52.381 0.00 0.00 0.00 3.77
982 3603 1.475280 CATGGCAGGACAATCACCAAG 59.525 52.381 0.00 0.00 33.30 3.61
998 3619 0.518636 CGTGAGACCAGCAAACATGG 59.481 55.000 0.00 0.00 43.87 3.66
999 3620 0.110056 GCGTGAGACCAGCAAACATG 60.110 55.000 0.00 0.00 0.00 3.21
1080 3701 2.301870 ACGCAGTGATTCCAACCTCTTA 59.698 45.455 0.00 0.00 42.51 2.10
1105 3726 0.907704 ACCCCTGCGTCACAATAGGA 60.908 55.000 0.00 0.00 31.91 2.94
1128 3749 4.394300 GCATGTTCTACTTGAAGCACAGAT 59.606 41.667 0.00 0.00 35.01 2.90
1205 3826 2.223377 CGTTGGAGTTTTGGTAGACAGC 59.777 50.000 0.00 0.00 0.00 4.40
1302 3923 4.642429 AGCTAACACCATCTTTTTCGAGT 58.358 39.130 0.00 0.00 0.00 4.18
1313 3934 7.418025 GGAGATTACTAGTTGAGCTAACACCAT 60.418 40.741 0.00 0.00 41.88 3.55
1326 3947 7.397761 AGCTGACTTAACTGGAGATTACTAGTT 59.602 37.037 0.00 0.00 42.46 2.24
1415 4036 1.343465 ACATACATAGGTGGCGGCTAC 59.657 52.381 11.43 8.09 0.00 3.58
1476 4183 6.351371 CCCTCAAGAGCTAGAAATGACTAACA 60.351 42.308 0.00 0.00 0.00 2.41
1484 4193 3.840666 TCACACCCTCAAGAGCTAGAAAT 59.159 43.478 0.00 0.00 0.00 2.17
1639 4354 2.225019 CCAAGCGATATCACATCCTTGC 59.775 50.000 3.12 0.00 31.25 4.01
1654 4369 2.086869 AGAATGAACATGGTCCAAGCG 58.913 47.619 8.62 0.00 0.00 4.68
1706 4421 1.468520 CAAATGATCCCACACCGTGAC 59.531 52.381 5.28 0.00 35.23 3.67
1725 4440 1.872952 CGTCTGTCTCCATTTTGCACA 59.127 47.619 0.00 0.00 0.00 4.57
1794 4509 8.903820 GCTTAAAATGAACTATAGATGGTTGGT 58.096 33.333 6.78 0.00 31.29 3.67
1795 4510 8.902806 TGCTTAAAATGAACTATAGATGGTTGG 58.097 33.333 6.78 0.00 31.29 3.77
1806 4521 9.283768 TCAGATTCTTGTGCTTAAAATGAACTA 57.716 29.630 0.00 0.00 0.00 2.24
1846 4569 0.323629 CCTCAGGTTGGAAGCCGTAA 59.676 55.000 0.00 0.00 0.00 3.18
1913 4636 7.094248 CCAGTCATACAGAGATATCTCCTTCAG 60.094 44.444 25.88 15.06 43.88 3.02
1945 4668 2.103042 GTCCCTGCAGCGCTTACAG 61.103 63.158 24.09 24.09 0.00 2.74
2015 4738 3.455910 TCCACCCTCAACATATCCTTCTG 59.544 47.826 0.00 0.00 0.00 3.02
2034 4757 5.338632 TGACCAACTCCTTAGTAATCTCCA 58.661 41.667 0.00 0.00 33.75 3.86
2105 4828 3.884693 TGATGACGCCATGCATCTTATTT 59.115 39.130 0.00 0.00 41.08 1.40
2151 4874 9.563898 GTACATATGCCATGAATGATTTACATG 57.436 33.333 1.58 0.00 39.39 3.21
2152 4875 9.524496 AGTACATATGCCATGAATGATTTACAT 57.476 29.630 1.58 0.00 41.45 2.29
2153 4876 8.922931 AGTACATATGCCATGAATGATTTACA 57.077 30.769 1.58 0.00 0.00 2.41
2154 4877 9.224267 AGAGTACATATGCCATGAATGATTTAC 57.776 33.333 1.58 0.00 0.00 2.01
2155 4878 9.797642 AAGAGTACATATGCCATGAATGATTTA 57.202 29.630 1.58 0.00 0.00 1.40
2156 4879 8.701908 AAGAGTACATATGCCATGAATGATTT 57.298 30.769 1.58 0.00 0.00 2.17
2199 4923 0.108585 AGCACCGAAGCTCCTTGAAA 59.891 50.000 0.00 0.00 42.18 2.69
2201 4925 3.471620 AGCACCGAAGCTCCTTGA 58.528 55.556 0.00 0.00 42.18 3.02
2213 4937 4.414337 ACTGAATTATGGAGAGAGCACC 57.586 45.455 0.00 0.00 0.00 5.01
2274 4998 2.015736 AGGCATCAGTACAAGCTTCG 57.984 50.000 0.00 0.00 0.00 3.79
2338 5062 7.380423 ACTTGTAAGAGGTGGCATAGATAAT 57.620 36.000 0.00 0.00 0.00 1.28
2345 5069 4.098914 TCAAACTTGTAAGAGGTGGCAT 57.901 40.909 0.00 0.00 0.00 4.40
2348 5072 5.805728 ACCTATCAAACTTGTAAGAGGTGG 58.194 41.667 0.00 0.00 0.00 4.61
2351 5075 8.082242 CCAAAAACCTATCAAACTTGTAAGAGG 58.918 37.037 0.00 0.00 0.00 3.69
2403 5127 0.098728 AACACAAGTGCGTCAGTTGC 59.901 50.000 20.24 0.00 45.50 4.17
2411 5135 1.847999 CAAGCAGAAAACACAAGTGCG 59.152 47.619 0.00 0.00 39.19 5.34
2445 5169 2.634600 TGAACACCGTACCCATAATGC 58.365 47.619 0.00 0.00 0.00 3.56
2454 5182 4.460505 GCTAACACATTTGAACACCGTAC 58.539 43.478 0.00 0.00 0.00 3.67
2493 5221 2.504367 CTGGGTCAACCACAAGTAAGG 58.496 52.381 0.89 0.00 46.80 2.69
2534 5339 8.618702 ATGTCAGGCTGATAATAAATCTGAAG 57.381 34.615 21.84 0.00 32.59 3.02
2537 5342 8.396390 GCATATGTCAGGCTGATAATAAATCTG 58.604 37.037 21.84 15.68 0.00 2.90
2542 5347 6.772605 ACTGCATATGTCAGGCTGATAATAA 58.227 36.000 21.84 8.50 36.50 1.40
2549 5354 9.993454 AATATATATACTGCATATGTCAGGCTG 57.007 33.333 22.64 8.58 38.66 4.85
2573 5385 8.531146 CCTTTCTACCATTTGACCATTGTAAAT 58.469 33.333 0.00 0.00 0.00 1.40
2574 5386 7.507616 ACCTTTCTACCATTTGACCATTGTAAA 59.492 33.333 0.00 0.00 0.00 2.01
2575 5387 7.007723 ACCTTTCTACCATTTGACCATTGTAA 58.992 34.615 0.00 0.00 0.00 2.41
2578 5390 5.982890 ACCTTTCTACCATTTGACCATTG 57.017 39.130 0.00 0.00 0.00 2.82
2583 5395 3.826729 AGCCAACCTTTCTACCATTTGAC 59.173 43.478 0.00 0.00 0.00 3.18
2627 5439 8.910351 AGTTGAGAGCAAGAAAGTTTATACTT 57.090 30.769 0.00 0.00 39.38 2.24
2643 5620 8.439286 CAAAATAGACAGAACTTAGTTGAGAGC 58.561 37.037 0.93 0.00 0.00 4.09
2652 5629 8.974060 ACCACTTTCAAAATAGACAGAACTTA 57.026 30.769 0.00 0.00 0.00 2.24
2679 5656 9.189156 TGCTTATGCAGACCTAAATTTAATCTT 57.811 29.630 8.33 0.46 45.31 2.40
2713 5693 7.541783 GCATGCATTTAACATTACTGAGTCAAA 59.458 33.333 14.21 0.00 0.00 2.69
2718 5698 6.419710 CCATGCATGCATTTAACATTACTGAG 59.580 38.462 30.32 13.37 33.90 3.35
2754 5734 5.450818 ACAATAGGAGATGCACCCTTAAA 57.549 39.130 9.12 0.00 34.11 1.52
2757 5737 3.010584 ACAACAATAGGAGATGCACCCTT 59.989 43.478 9.12 0.00 34.11 3.95
2758 5738 2.578021 ACAACAATAGGAGATGCACCCT 59.422 45.455 8.87 8.87 36.60 4.34
2759 5739 2.684881 CACAACAATAGGAGATGCACCC 59.315 50.000 0.00 0.00 0.00 4.61
2760 5740 2.098117 GCACAACAATAGGAGATGCACC 59.902 50.000 0.00 0.00 0.00 5.01
2761 5741 3.012518 AGCACAACAATAGGAGATGCAC 58.987 45.455 0.00 0.00 34.03 4.57
2762 5742 3.273434 GAGCACAACAATAGGAGATGCA 58.727 45.455 0.00 0.00 34.03 3.96
2763 5743 3.273434 TGAGCACAACAATAGGAGATGC 58.727 45.455 0.00 0.00 0.00 3.91
2806 5786 9.595357 GCTAACATAGGAAAATAAGCGATAAAC 57.405 33.333 0.00 0.00 0.00 2.01
2807 5787 9.332502 TGCTAACATAGGAAAATAAGCGATAAA 57.667 29.630 0.00 0.00 0.00 1.40
2808 5788 8.896320 TGCTAACATAGGAAAATAAGCGATAA 57.104 30.769 0.00 0.00 0.00 1.75
2809 5789 8.935844 CATGCTAACATAGGAAAATAAGCGATA 58.064 33.333 0.00 0.00 33.67 2.92
2810 5790 7.661437 TCATGCTAACATAGGAAAATAAGCGAT 59.339 33.333 0.00 0.00 33.67 4.58
2811 5791 6.989759 TCATGCTAACATAGGAAAATAAGCGA 59.010 34.615 0.00 0.00 33.67 4.93
2812 5792 7.189693 TCATGCTAACATAGGAAAATAAGCG 57.810 36.000 0.00 0.00 33.67 4.68
2825 5805 8.131100 CGGAGAAAAACATATTCATGCTAACAT 58.869 33.333 0.00 0.00 35.39 2.71
2826 5806 7.415095 CCGGAGAAAAACATATTCATGCTAACA 60.415 37.037 0.00 0.00 35.39 2.41
2827 5807 6.912591 CCGGAGAAAAACATATTCATGCTAAC 59.087 38.462 0.00 0.00 35.39 2.34
2828 5808 6.039270 CCCGGAGAAAAACATATTCATGCTAA 59.961 38.462 0.73 0.00 35.39 3.09
2829 5809 5.530915 CCCGGAGAAAAACATATTCATGCTA 59.469 40.000 0.73 0.00 35.39 3.49
2830 5810 4.339247 CCCGGAGAAAAACATATTCATGCT 59.661 41.667 0.73 0.00 35.39 3.79
2831 5811 4.097892 ACCCGGAGAAAAACATATTCATGC 59.902 41.667 0.73 0.00 35.39 4.06
2832 5812 5.590259 AGACCCGGAGAAAAACATATTCATG 59.410 40.000 0.73 0.00 38.21 3.07
2833 5813 5.755849 AGACCCGGAGAAAAACATATTCAT 58.244 37.500 0.73 0.00 0.00 2.57
2834 5814 5.174037 AGACCCGGAGAAAAACATATTCA 57.826 39.130 0.73 0.00 0.00 2.57
2835 5815 6.260271 CCTAAGACCCGGAGAAAAACATATTC 59.740 42.308 0.73 0.00 0.00 1.75
2836 5816 6.120220 CCTAAGACCCGGAGAAAAACATATT 58.880 40.000 0.73 0.00 0.00 1.28
2837 5817 5.191124 ACCTAAGACCCGGAGAAAAACATAT 59.809 40.000 0.73 0.00 0.00 1.78
2838 5818 4.533311 ACCTAAGACCCGGAGAAAAACATA 59.467 41.667 0.73 0.00 0.00 2.29
2839 5819 3.329814 ACCTAAGACCCGGAGAAAAACAT 59.670 43.478 0.73 0.00 0.00 2.71
2840 5820 2.707257 ACCTAAGACCCGGAGAAAAACA 59.293 45.455 0.73 0.00 0.00 2.83
2841 5821 3.413846 ACCTAAGACCCGGAGAAAAAC 57.586 47.619 0.73 0.00 0.00 2.43
2842 5822 4.419282 TCTACCTAAGACCCGGAGAAAAA 58.581 43.478 0.73 0.00 0.00 1.94
2843 5823 4.051661 TCTACCTAAGACCCGGAGAAAA 57.948 45.455 0.73 0.00 0.00 2.29
2844 5824 3.744940 TCTACCTAAGACCCGGAGAAA 57.255 47.619 0.73 0.00 0.00 2.52
2845 5825 3.744940 TTCTACCTAAGACCCGGAGAA 57.255 47.619 0.73 0.00 32.51 2.87
2846 5826 3.744940 TTTCTACCTAAGACCCGGAGA 57.255 47.619 0.73 0.00 32.51 3.71
2847 5827 5.010820 CCTATTTTCTACCTAAGACCCGGAG 59.989 48.000 0.73 0.00 32.51 4.63
2848 5828 4.897670 CCTATTTTCTACCTAAGACCCGGA 59.102 45.833 0.73 0.00 32.51 5.14
2849 5829 4.897670 TCCTATTTTCTACCTAAGACCCGG 59.102 45.833 0.00 0.00 32.51 5.73
2850 5830 6.475596 TTCCTATTTTCTACCTAAGACCCG 57.524 41.667 0.00 0.00 32.51 5.28
2851 5831 6.711194 GCATTCCTATTTTCTACCTAAGACCC 59.289 42.308 0.00 0.00 32.51 4.46
2852 5832 7.442666 CAGCATTCCTATTTTCTACCTAAGACC 59.557 40.741 0.00 0.00 32.51 3.85
2853 5833 7.988028 ACAGCATTCCTATTTTCTACCTAAGAC 59.012 37.037 0.00 0.00 32.51 3.01
2854 5834 7.987458 CACAGCATTCCTATTTTCTACCTAAGA 59.013 37.037 0.00 0.00 0.00 2.10
2855 5835 7.770897 ACACAGCATTCCTATTTTCTACCTAAG 59.229 37.037 0.00 0.00 0.00 2.18
2856 5836 7.552687 CACACAGCATTCCTATTTTCTACCTAA 59.447 37.037 0.00 0.00 0.00 2.69
2857 5837 7.047891 CACACAGCATTCCTATTTTCTACCTA 58.952 38.462 0.00 0.00 0.00 3.08
2858 5838 5.882557 CACACAGCATTCCTATTTTCTACCT 59.117 40.000 0.00 0.00 0.00 3.08
2859 5839 5.648092 ACACACAGCATTCCTATTTTCTACC 59.352 40.000 0.00 0.00 0.00 3.18
2860 5840 6.546395 CACACACAGCATTCCTATTTTCTAC 58.454 40.000 0.00 0.00 0.00 2.59
2861 5841 5.123820 GCACACACAGCATTCCTATTTTCTA 59.876 40.000 0.00 0.00 0.00 2.10
2862 5842 4.082571 GCACACACAGCATTCCTATTTTCT 60.083 41.667 0.00 0.00 0.00 2.52
2863 5843 4.168760 GCACACACAGCATTCCTATTTTC 58.831 43.478 0.00 0.00 0.00 2.29
2864 5844 3.056607 GGCACACACAGCATTCCTATTTT 60.057 43.478 0.00 0.00 0.00 1.82
2865 5845 2.493278 GGCACACACAGCATTCCTATTT 59.507 45.455 0.00 0.00 0.00 1.40
2866 5846 2.094675 GGCACACACAGCATTCCTATT 58.905 47.619 0.00 0.00 0.00 1.73
2867 5847 1.283029 AGGCACACACAGCATTCCTAT 59.717 47.619 0.00 0.00 0.00 2.57
2868 5848 0.692476 AGGCACACACAGCATTCCTA 59.308 50.000 0.00 0.00 0.00 2.94
2869 5849 0.607489 GAGGCACACACAGCATTCCT 60.607 55.000 0.00 0.00 0.00 3.36
2870 5850 0.890542 TGAGGCACACACAGCATTCC 60.891 55.000 0.00 0.00 0.00 3.01
2871 5851 1.171308 ATGAGGCACACACAGCATTC 58.829 50.000 0.00 0.00 0.00 2.67
2872 5852 1.271379 CAATGAGGCACACACAGCATT 59.729 47.619 0.00 0.00 0.00 3.56
2873 5853 0.885879 CAATGAGGCACACACAGCAT 59.114 50.000 0.00 0.00 0.00 3.79
2874 5854 0.466007 ACAATGAGGCACACACAGCA 60.466 50.000 0.00 0.00 0.00 4.41
2875 5855 0.670162 AACAATGAGGCACACACAGC 59.330 50.000 0.00 0.00 0.00 4.40
2876 5856 1.677576 ACAACAATGAGGCACACACAG 59.322 47.619 0.00 0.00 0.00 3.66
2877 5857 1.675483 GACAACAATGAGGCACACACA 59.325 47.619 0.00 0.00 0.00 3.72
2878 5858 1.675483 TGACAACAATGAGGCACACAC 59.325 47.619 0.00 0.00 0.00 3.82
2879 5859 2.049888 TGACAACAATGAGGCACACA 57.950 45.000 0.00 0.00 0.00 3.72
2880 5860 2.816087 AGATGACAACAATGAGGCACAC 59.184 45.455 0.00 0.00 0.00 3.82
2881 5861 3.144657 AGATGACAACAATGAGGCACA 57.855 42.857 0.00 0.00 0.00 4.57
2882 5862 3.366679 CCAAGATGACAACAATGAGGCAC 60.367 47.826 0.00 0.00 0.00 5.01
2883 5863 2.821378 CCAAGATGACAACAATGAGGCA 59.179 45.455 0.00 0.00 0.00 4.75
2884 5864 2.416431 GCCAAGATGACAACAATGAGGC 60.416 50.000 0.00 0.00 0.00 4.70
2885 5865 3.087031 AGCCAAGATGACAACAATGAGG 58.913 45.455 0.00 0.00 0.00 3.86
2886 5866 4.008330 AGAGCCAAGATGACAACAATGAG 58.992 43.478 0.00 0.00 0.00 2.90
2887 5867 4.025040 AGAGCCAAGATGACAACAATGA 57.975 40.909 0.00 0.00 0.00 2.57
2888 5868 4.380233 GGAAGAGCCAAGATGACAACAATG 60.380 45.833 0.00 0.00 36.34 2.82
2889 5869 3.760684 GGAAGAGCCAAGATGACAACAAT 59.239 43.478 0.00 0.00 36.34 2.71
2890 5870 3.149196 GGAAGAGCCAAGATGACAACAA 58.851 45.455 0.00 0.00 36.34 2.83
2891 5871 2.373169 AGGAAGAGCCAAGATGACAACA 59.627 45.455 0.00 0.00 40.02 3.33
2892 5872 3.064900 AGGAAGAGCCAAGATGACAAC 57.935 47.619 0.00 0.00 40.02 3.32
2893 5873 5.441718 AATAGGAAGAGCCAAGATGACAA 57.558 39.130 0.00 0.00 40.02 3.18
2894 5874 5.441718 AAATAGGAAGAGCCAAGATGACA 57.558 39.130 0.00 0.00 40.02 3.58
2895 5875 5.007136 CGAAAATAGGAAGAGCCAAGATGAC 59.993 44.000 0.00 0.00 40.02 3.06
2896 5876 5.104941 TCGAAAATAGGAAGAGCCAAGATGA 60.105 40.000 0.00 0.00 40.02 2.92
2897 5877 5.118990 TCGAAAATAGGAAGAGCCAAGATG 58.881 41.667 0.00 0.00 40.02 2.90
2898 5878 5.359194 TCGAAAATAGGAAGAGCCAAGAT 57.641 39.130 0.00 0.00 40.02 2.40
2899 5879 4.383118 CCTCGAAAATAGGAAGAGCCAAGA 60.383 45.833 0.00 0.00 40.02 3.02
2900 5880 3.873952 CCTCGAAAATAGGAAGAGCCAAG 59.126 47.826 0.00 0.00 40.02 3.61
2901 5881 3.517901 TCCTCGAAAATAGGAAGAGCCAA 59.482 43.478 0.00 0.00 40.23 4.52
2902 5882 3.104512 TCCTCGAAAATAGGAAGAGCCA 58.895 45.455 0.00 0.00 40.23 4.75
2903 5883 3.821421 TCCTCGAAAATAGGAAGAGCC 57.179 47.619 0.00 0.00 40.23 4.70
2904 5884 6.128418 GCATAATCCTCGAAAATAGGAAGAGC 60.128 42.308 0.00 0.00 46.06 4.09
2905 5885 7.117523 CAGCATAATCCTCGAAAATAGGAAGAG 59.882 40.741 0.00 0.00 46.06 2.85
2906 5886 6.931281 CAGCATAATCCTCGAAAATAGGAAGA 59.069 38.462 0.00 0.00 46.06 2.87
2907 5887 6.708054 ACAGCATAATCCTCGAAAATAGGAAG 59.292 38.462 0.00 0.00 46.06 3.46
2908 5888 6.591935 ACAGCATAATCCTCGAAAATAGGAA 58.408 36.000 0.00 0.00 46.06 3.36
2909 5889 6.174720 ACAGCATAATCCTCGAAAATAGGA 57.825 37.500 0.00 0.00 46.96 2.94
2910 5890 7.155328 AGTACAGCATAATCCTCGAAAATAGG 58.845 38.462 0.00 0.00 35.26 2.57
2911 5891 9.862371 ATAGTACAGCATAATCCTCGAAAATAG 57.138 33.333 0.00 0.00 0.00 1.73
2912 5892 9.856488 GATAGTACAGCATAATCCTCGAAAATA 57.144 33.333 0.00 0.00 0.00 1.40
2913 5893 8.367911 TGATAGTACAGCATAATCCTCGAAAAT 58.632 33.333 0.00 0.00 0.00 1.82
2914 5894 7.722363 TGATAGTACAGCATAATCCTCGAAAA 58.278 34.615 0.00 0.00 0.00 2.29
2915 5895 7.014326 ACTGATAGTACAGCATAATCCTCGAAA 59.986 37.037 0.00 0.00 41.06 3.46
2916 5896 6.490381 ACTGATAGTACAGCATAATCCTCGAA 59.510 38.462 0.00 0.00 41.06 3.71
2917 5897 6.004574 ACTGATAGTACAGCATAATCCTCGA 58.995 40.000 0.00 0.00 41.06 4.04
2918 5898 6.072452 TGACTGATAGTACAGCATAATCCTCG 60.072 42.308 0.00 0.00 41.06 4.63
2919 5899 7.220741 TGACTGATAGTACAGCATAATCCTC 57.779 40.000 0.00 0.00 41.06 3.71
2920 5900 7.234371 ACATGACTGATAGTACAGCATAATCCT 59.766 37.037 0.00 0.00 41.06 3.24
2921 5901 7.382110 ACATGACTGATAGTACAGCATAATCC 58.618 38.462 0.00 0.00 41.06 3.01
2922 5902 8.824159 AACATGACTGATAGTACAGCATAATC 57.176 34.615 0.00 0.00 41.06 1.75
2923 5903 7.875041 GGAACATGACTGATAGTACAGCATAAT 59.125 37.037 0.00 0.00 41.06 1.28
2924 5904 7.069950 AGGAACATGACTGATAGTACAGCATAA 59.930 37.037 0.00 0.00 41.06 1.90
2925 5905 6.551227 AGGAACATGACTGATAGTACAGCATA 59.449 38.462 0.00 0.00 41.06 3.14
2926 5906 5.365025 AGGAACATGACTGATAGTACAGCAT 59.635 40.000 0.00 0.00 41.06 3.79
2927 5907 4.711846 AGGAACATGACTGATAGTACAGCA 59.288 41.667 0.00 0.00 41.06 4.41
2928 5908 5.269505 AGGAACATGACTGATAGTACAGC 57.730 43.478 0.00 0.00 41.06 4.40
2929 5909 7.323420 TGAAAGGAACATGACTGATAGTACAG 58.677 38.462 0.00 0.00 42.78 2.74
2930 5910 7.039011 ACTGAAAGGAACATGACTGATAGTACA 60.039 37.037 0.00 0.00 39.30 2.90
2931 5911 7.324178 ACTGAAAGGAACATGACTGATAGTAC 58.676 38.462 0.00 0.00 39.30 2.73
2932 5912 7.482169 ACTGAAAGGAACATGACTGATAGTA 57.518 36.000 0.00 0.00 39.30 1.82
2933 5913 6.365970 ACTGAAAGGAACATGACTGATAGT 57.634 37.500 0.00 0.00 39.30 2.12
2934 5914 8.777865 TTTACTGAAAGGAACATGACTGATAG 57.222 34.615 0.00 0.00 35.67 2.08
2935 5915 9.739276 AATTTACTGAAAGGAACATGACTGATA 57.261 29.630 0.00 0.00 35.67 2.15
2936 5916 8.641498 AATTTACTGAAAGGAACATGACTGAT 57.359 30.769 0.00 0.00 35.67 2.90
2937 5917 8.999431 GTAATTTACTGAAAGGAACATGACTGA 58.001 33.333 0.00 0.00 35.67 3.41
2938 5918 8.783093 TGTAATTTACTGAAAGGAACATGACTG 58.217 33.333 0.00 0.00 35.67 3.51
2939 5919 8.784043 GTGTAATTTACTGAAAGGAACATGACT 58.216 33.333 0.00 0.00 35.67 3.41
2940 5920 8.784043 AGTGTAATTTACTGAAAGGAACATGAC 58.216 33.333 0.00 0.00 35.67 3.06
2941 5921 8.918202 AGTGTAATTTACTGAAAGGAACATGA 57.082 30.769 0.00 0.00 35.67 3.07
2942 5922 9.965824 AAAGTGTAATTTACTGAAAGGAACATG 57.034 29.630 7.99 0.00 35.67 3.21
2943 5923 9.965824 CAAAGTGTAATTTACTGAAAGGAACAT 57.034 29.630 7.99 0.00 35.67 2.71
2944 5924 8.410141 CCAAAGTGTAATTTACTGAAAGGAACA 58.590 33.333 7.99 0.00 35.67 3.18
2945 5925 8.626526 TCCAAAGTGTAATTTACTGAAAGGAAC 58.373 33.333 7.99 0.00 35.67 3.62
2946 5926 8.754991 TCCAAAGTGTAATTTACTGAAAGGAA 57.245 30.769 7.99 0.00 39.30 3.36
2947 5927 8.934023 ATCCAAAGTGTAATTTACTGAAAGGA 57.066 30.769 7.99 9.58 39.30 3.36
2948 5928 8.792633 TGATCCAAAGTGTAATTTACTGAAAGG 58.207 33.333 7.99 5.25 39.30 3.11
2949 5929 9.612620 GTGATCCAAAGTGTAATTTACTGAAAG 57.387 33.333 7.99 0.00 42.29 2.62
2950 5930 8.286800 CGTGATCCAAAGTGTAATTTACTGAAA 58.713 33.333 7.99 0.00 0.00 2.69
2951 5931 7.442969 ACGTGATCCAAAGTGTAATTTACTGAA 59.557 33.333 7.99 0.00 0.00 3.02
2952 5932 6.932400 ACGTGATCCAAAGTGTAATTTACTGA 59.068 34.615 7.99 0.00 0.00 3.41
2953 5933 7.129109 ACGTGATCCAAAGTGTAATTTACTG 57.871 36.000 7.99 0.00 0.00 2.74
2954 5934 9.444600 AATACGTGATCCAAAGTGTAATTTACT 57.555 29.630 0.00 0.00 0.00 2.24
2957 5937 7.960738 CGAAATACGTGATCCAAAGTGTAATTT 59.039 33.333 0.00 0.00 37.22 1.82
2958 5938 7.332430 TCGAAATACGTGATCCAAAGTGTAATT 59.668 33.333 0.00 0.00 43.13 1.40
2959 5939 6.814644 TCGAAATACGTGATCCAAAGTGTAAT 59.185 34.615 0.00 0.00 43.13 1.89
2960 5940 6.089820 GTCGAAATACGTGATCCAAAGTGTAA 59.910 38.462 0.00 0.00 43.13 2.41
2961 5941 5.574055 GTCGAAATACGTGATCCAAAGTGTA 59.426 40.000 0.00 0.00 43.13 2.90
2962 5942 4.387862 GTCGAAATACGTGATCCAAAGTGT 59.612 41.667 0.00 0.00 43.13 3.55
2963 5943 4.201685 GGTCGAAATACGTGATCCAAAGTG 60.202 45.833 0.00 0.00 43.13 3.16
2964 5944 3.930848 GGTCGAAATACGTGATCCAAAGT 59.069 43.478 0.00 0.00 43.13 2.66
2965 5945 3.308866 GGGTCGAAATACGTGATCCAAAG 59.691 47.826 0.00 0.00 43.13 2.77
2966 5946 3.264104 GGGTCGAAATACGTGATCCAAA 58.736 45.455 0.00 0.00 43.13 3.28
2967 5947 2.736081 CGGGTCGAAATACGTGATCCAA 60.736 50.000 0.00 0.00 43.13 3.53
2968 5948 1.202325 CGGGTCGAAATACGTGATCCA 60.202 52.381 0.00 0.00 43.13 3.41
2969 5949 1.066002 TCGGGTCGAAATACGTGATCC 59.934 52.381 0.00 0.00 43.13 3.36
2970 5950 2.223433 ACTCGGGTCGAAATACGTGATC 60.223 50.000 0.00 0.00 43.13 2.92
2971 5951 1.747355 ACTCGGGTCGAAATACGTGAT 59.253 47.619 0.00 0.00 43.13 3.06
2972 5952 1.167851 ACTCGGGTCGAAATACGTGA 58.832 50.000 0.00 0.00 43.13 4.35
2973 5953 1.652124 CAACTCGGGTCGAAATACGTG 59.348 52.381 0.00 0.00 43.13 4.49
2974 5954 1.986698 CAACTCGGGTCGAAATACGT 58.013 50.000 0.00 0.00 43.13 3.57
2975 5955 0.643820 GCAACTCGGGTCGAAATACG 59.356 55.000 0.00 0.00 44.09 3.06
2976 5956 1.717194 TGCAACTCGGGTCGAAATAC 58.283 50.000 0.00 0.00 34.74 1.89
2977 5957 2.459060 TTGCAACTCGGGTCGAAATA 57.541 45.000 0.00 0.00 34.74 1.40
2978 5958 1.821216 ATTGCAACTCGGGTCGAAAT 58.179 45.000 0.00 0.00 34.74 2.17
2979 5959 1.533731 GAATTGCAACTCGGGTCGAAA 59.466 47.619 0.00 0.00 34.74 3.46
2980 5960 1.153353 GAATTGCAACTCGGGTCGAA 58.847 50.000 0.00 0.00 34.74 3.71
2981 5961 0.320374 AGAATTGCAACTCGGGTCGA 59.680 50.000 0.00 0.00 0.00 4.20
2982 5962 0.443869 CAGAATTGCAACTCGGGTCG 59.556 55.000 0.00 0.00 0.00 4.79
3013 5993 9.155975 CGCCAAGCTATCTGTAATATCTATTTT 57.844 33.333 0.00 0.00 0.00 1.82
3014 5994 7.278868 GCGCCAAGCTATCTGTAATATCTATTT 59.721 37.037 0.00 0.00 44.04 1.40
3015 5995 6.758886 GCGCCAAGCTATCTGTAATATCTATT 59.241 38.462 0.00 0.00 44.04 1.73
3016 5996 6.276847 GCGCCAAGCTATCTGTAATATCTAT 58.723 40.000 0.00 0.00 44.04 1.98
3017 5997 5.651530 GCGCCAAGCTATCTGTAATATCTA 58.348 41.667 0.00 0.00 44.04 1.98
3018 5998 4.499183 GCGCCAAGCTATCTGTAATATCT 58.501 43.478 0.00 0.00 44.04 1.98
3019 5999 4.849111 GCGCCAAGCTATCTGTAATATC 57.151 45.455 0.00 0.00 44.04 1.63
3033 6013 1.672881 CTCTAAATTCAGGGCGCCAAG 59.327 52.381 30.85 20.14 0.00 3.61
3034 6014 1.004277 ACTCTAAATTCAGGGCGCCAA 59.996 47.619 30.85 15.20 0.00 4.52
3035 6015 0.618458 ACTCTAAATTCAGGGCGCCA 59.382 50.000 30.85 7.96 0.00 5.69
3036 6016 1.300481 GACTCTAAATTCAGGGCGCC 58.700 55.000 21.18 21.18 0.00 6.53
3037 6017 1.936547 CTGACTCTAAATTCAGGGCGC 59.063 52.381 0.00 0.00 36.39 6.53
3042 6022 6.467677 TGGAACTTCCTGACTCTAAATTCAG 58.532 40.000 9.31 0.00 37.46 3.02
3043 6023 6.433847 TGGAACTTCCTGACTCTAAATTCA 57.566 37.500 9.31 0.00 37.46 2.57
3044 6024 6.540551 GGATGGAACTTCCTGACTCTAAATTC 59.459 42.308 9.31 0.00 37.46 2.17
3045 6025 6.418946 GGATGGAACTTCCTGACTCTAAATT 58.581 40.000 9.31 0.00 37.46 1.82
3046 6026 5.104318 GGGATGGAACTTCCTGACTCTAAAT 60.104 44.000 9.31 0.00 37.46 1.40
3047 6027 4.225267 GGGATGGAACTTCCTGACTCTAAA 59.775 45.833 9.31 0.00 37.46 1.85
3048 6028 3.775316 GGGATGGAACTTCCTGACTCTAA 59.225 47.826 9.31 0.00 37.46 2.10
3049 6029 3.012959 AGGGATGGAACTTCCTGACTCTA 59.987 47.826 9.31 0.00 37.46 2.43
3050 6030 2.192263 GGGATGGAACTTCCTGACTCT 58.808 52.381 9.31 0.00 37.46 3.24
3051 6031 2.192263 AGGGATGGAACTTCCTGACTC 58.808 52.381 9.31 1.19 37.46 3.36
3052 6032 2.350863 AGGGATGGAACTTCCTGACT 57.649 50.000 9.31 0.20 37.46 3.41
3053 6033 3.441500 AAAGGGATGGAACTTCCTGAC 57.558 47.619 9.31 1.11 37.46 3.51
3054 6034 3.657727 AGAAAAGGGATGGAACTTCCTGA 59.342 43.478 9.31 0.00 37.46 3.86
3055 6035 4.039603 AGAAAAGGGATGGAACTTCCTG 57.960 45.455 9.31 0.00 37.46 3.86
3056 6036 4.749048 AAGAAAAGGGATGGAACTTCCT 57.251 40.909 9.31 0.00 37.46 3.36
3057 6037 5.808366 AAAAGAAAAGGGATGGAACTTCC 57.192 39.130 0.20 0.20 36.96 3.46
3058 6038 6.183360 TGGAAAAAGAAAAGGGATGGAACTTC 60.183 38.462 0.00 0.00 0.00 3.01
3059 6039 5.665360 TGGAAAAAGAAAAGGGATGGAACTT 59.335 36.000 0.00 0.00 0.00 2.66
3060 6040 5.215845 TGGAAAAAGAAAAGGGATGGAACT 58.784 37.500 0.00 0.00 0.00 3.01
3061 6041 5.511373 CCTGGAAAAAGAAAAGGGATGGAAC 60.511 44.000 0.00 0.00 0.00 3.62
3062 6042 4.592778 CCTGGAAAAAGAAAAGGGATGGAA 59.407 41.667 0.00 0.00 0.00 3.53
3063 6043 4.140805 TCCTGGAAAAAGAAAAGGGATGGA 60.141 41.667 0.00 0.00 0.00 3.41
3064 6044 4.159557 TCCTGGAAAAAGAAAAGGGATGG 58.840 43.478 0.00 0.00 0.00 3.51
3065 6045 5.337813 CCATCCTGGAAAAAGAAAAGGGATG 60.338 44.000 0.00 10.56 44.78 3.51
3066 6046 4.779489 CCATCCTGGAAAAAGAAAAGGGAT 59.221 41.667 0.00 0.00 40.96 3.85
3067 6047 4.159557 CCATCCTGGAAAAAGAAAAGGGA 58.840 43.478 0.00 0.00 40.96 4.20
3068 6048 3.261643 CCCATCCTGGAAAAAGAAAAGGG 59.738 47.826 0.00 0.00 40.96 3.95
3069 6049 3.903714 ACCCATCCTGGAAAAAGAAAAGG 59.096 43.478 0.00 0.00 40.96 3.11
3070 6050 5.551305 AACCCATCCTGGAAAAAGAAAAG 57.449 39.130 0.00 0.00 40.96 2.27


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.