>input_sequence_60892
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--------------------ATGTTTGCTGGTCTCACGCGCCTGTGGCTGCGCAATATGAGGTTTGGTGAACTGGACATC
CCCAACATCCTCAGCGCCTGTAAGAGGTTGGAATCACTGCGTCTCTCCTATTGTGACGCAGGGGTCCAATCTGTGCTTCA
AGTAGAACATGCTCAACTTGTTGAGCTCCACATCGACTATGGGGAATTTGAAGCAGTCCAACTCAGCTGTCTACCAAAAC
TCCAACGTGTCAAATATGTTGGTTGGTCTTACCAAGAAGATCCCCTGATTTTTGTTTCTGTCCCGCAGCTTTCAAAGCTA
ACACTCGAAAAAGATGGTGTTAGCTCAACTAGTAATCTCCAGTTAAGTCAGCTCCTTGCTAATGTACCCTGGATAAGCGA
CCTCCATCTGGATTTTAGAAGTGAAAAGGTACTCAGTAGCCGCCA-----------------------CCTATGTATGTC
TCATTCC-T-TTAATTGCTTATAATAGTACT-------------------------------------------------
------------TACAAACTTATGTTAGTC--ATTTCTAGCTCTTGAGGGTGTGATGTAATTTGTTTGCCCAATT-G---
--TTATTAATTTGCTTCTTGTGTGCCGTGCCAGATTTGGGTTCTACCTGAATGCCCCAGACTGCTTGTGCATGTGCTTGG
CAAGCTACAGATTGTGAATCTGGACAATCTTCCGCAAGGATGTGATATCGCTTGGACCATGTTCATTCTTGAAGCGGCAA
GCTCCCTAAAGGAGCTATGCGTCACGGTGTGGGATCATTTGTGCAAAATGGAGACAGACGAGGATGTCCGTAAGGAACTT
GGTTACTGTGAGAAAGCAAATGTGGAGTACCAACCATCTAT--------AGTTCATTTTAAGCACAAGAATCTGATTAAG
CTCACCGTTTACGGCTTCCAACCTGAGGACAACTTTGTGCGATACGTTAGGCGTGTCATGGAGATTGCAGTGAACCTGAA
GGAGATATCTCTGTATGACTGGCAGGTCTGTAAGCGCTGCAGGGACTTGGATCCCAGTATCAAGGTCTGTCCTTCTCGGT
ATCCACGGACCAGTGAGCAGAAGGATATGTTGAGGGTGGAGATTACTAAGGAGTTGGTCATGGCTTCGCCTGCTGTGATT
CACTTCAGGTCCTAA-----------------------------------------------------------------
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------------------------------------------------------------------------
>chr5A_1_TraesCS5A01G062000
GTGTAATCGTGGGCCGATTTCGGTTGGGGGTTCAGATCCCAAGCGGACTCGACTCGAAAAGGAGCTCTTTTTATTCAAAT
CCTCGACCTGAGGGAGATGCTCTAATCAGGATTGGAACCGAAAATCCGTCCGTAAATCCATAGAATAAAAAAAGGCAGCC
TCAGAGGAGCAACCAGGCCTTGCGCAATCGAAAGAGAAGAAAAGGAGCCGTTTATTTTTATATTT---------------
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-----ATTAATAGCAAAGTTTGT----GTCACGAGATATAGTCAGTAATCATTAGGATGTGATT-----CTCCTATTCTT
GTGCTGCCCTTGTTAGCGGACTAGCCGCAGGAGGTTTCGACTTCTTTGATCCATCTAATGAGGCTATCCCTGGCCAATGA
GGGACTTTGCGGGAGATGGAAAACAATAATGTAAGTGTCTTTTTT-TTTC----ATGTTTTCTCCTCCTTTGTTCATGCC
CATGAGGCTCATTTTCTTTCCTTGATTAATGCGATGCAGAAAGCCAAAGCTCGCTGCCACGAAGCAGCTTCGGATGAAGC
TGAAGTTGATAGGCTTAGCAAGCTGCCAGATCACGTTCTACTCAACATCCTGGAGAGGGTTCGCACGATAGATGCCTTGA
GAACCTGCATCCTCTCTAAGAGAATGCTCAAGCTTCCCCCCATGCTCTCGCTGCTTGATATAGACATTGGTTCCCTTGCG
CGTTACATCAAGCCCAAGGTCGACACCACTAATCGTATTTTTCAGTA---------CAACACTGCTGTGGCTGCTATCAT
TGAGAAGGTCCTGAGTGTGAGGAATCCTGAGATCCCCATCCGCAAACTGAGGGTCAGGTTCTG--------------TTT
GAGGCCTGATGAATGTCTCTCCATCAGCCAAGTCGTCGCCCATGCCATGGCAACCCAA---AAGCTCGATGTTGCTGAGT
TTGTGGTCCTCACGGAGACGATTTGTTTGAAATGCACTGAAGACCATCTCCTCTGTTATGCCCCAAGCGCTTCAATAGTT
GGCTTGGTGATTGTCCTGCCATGTTTGCTGGTCTCACGCGCCTGTGGCTGCGCAATATGAGGTTTGGTGAACTGGACATC
CCCAACATCCTCAGCGCCTGTAAGAGGTTGGAATCACTGCGTCTCTCCTATTGTGACGCAGGGGTCCAATCTGTGCTTCA
AGTAGAACATGCTCAACTTGTTGAGCTCCACATCGACTATGGGGAATTTGAAGCAGTCCAACTCAGCTGTCTACCAAAAC
TCCAACGTGTCAAATATGTTGGTTGGTCTTACCAAGAAGATCCCCTGATTTTTGTTTCTGTCCCGCAGCTTTCAAAGCTA
ACACTCGAAAAAGATGGTGTTAGCTCAACTAGTAATCTCCAGTTAAGTCAGCTCCTTGCTAATGTACCCTGGATAAGCGA
CCTCCATCTGGATTTTAGAAGTGAAAAGGTACTCAGTAGCCGCCA-----------------------CCTATGTATGTC
TCATTCC-T-TTAATTGCTTATAATAGTACT-------------------------------------------------
------------TACAAACTTATGTTAGTC--ATTTCTAGCTCTTGAGGGTGTGATGTAATTTGTTTGCCCAATT-G---
--TTATTAATTTGCTTCTTGTGTGCCGTGCCAGATTTGGGTTCTACCTGAATGCCCCAGACTGCTTGTGCATGTGCTTGG
CAAGCTACAGATTGTGAATCTGGACAATCTTCCGCAAGGATGTGATATCGCTTGGACCATGTTCATTCTTGAAGCGGCAA
GCTCCCTAAAGGAGCTATGCGTCACGGTGTGGGATCATTTGTGCAAAATGGAGACAGACGAGGATGTCCGTAAGGAACTT
GGTTACTGTGAGAAAGCAAATGTGGAGTACCAACCATCTAT--------AGTTCATTTTAAGCACAAGAATCTGATTAAG
CTCACCGTTTACGGCTTCCAACCTGAGGACAACTTTGTGCGATACGTTAGGCGTGTCATGGAGATTGCAGTGAACCTGAA
GGAGATATCTCTGTATGACTGGCAGGTCTGTAAGCGCTGCAGGGACTTGGATCCCAGTATCAAGGTCTGTCCTTCTCGGT
ATCCACGGACCAGTGAGCAGAAGGATATGTTGAGGGTGGAGATTACTAAGGAGTTGGTCATGGCTTCGCCTGCTGTGATT
CACTTCAGGTCCTAATTAATAATTGAAAAATAAGATGCATGGCGTCATCAGTAAAATCTAGAGTCCATCTGTCCATGTAA
A-TCATTCATGGCATATGTACTCTTATTTATCGTCTATGTAGTTTCAAGGAGCTTCGGTGCTCTCTCCATAATTCAGTAG
TCACTGCATTTGTATTCTTATTTATTTATCCCTCAACCGAAGCTTGTACTGATGCCTTAGGGCAAAAATAGTTATTAATA
AATGTTTTGAATATCATGATAATTATCTATGCCACCTCTTACAAGTTTGATAGGTTTTTGGAGAAATTTATCTTACAAGT
TGTAAAGCAACTGACGCACTTGTGTTTTCTGCTTGGTCTATGTTATACG----CATTATGGGTACGGTGTTCAAATGTGT
TAGCCTGATGCATACTAAGTCC----------------------------------------------------------
---------------TTACTTGTGGTTGACCCAGCCAGACCTCA----GGTCTCCAATCTTCAGATTTATTATC------
-AGCCTGACATATGCAGTATATATATTTACAATGGTCAAATGGTAGAAAGGTTGGCTTAATGTTTTTTTTCTGTAATAA-
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----AGTATAAACTTTCTTGCTCTCAACTAAGTTCTGTCTATTTTGAAAGTGGTAAAGATTAAATTTAGGTCTGCATAAG
CAAA---CTCTTTTTGACTCAGTAATGTTAAATGCATGCATGGAAATTGTTTTTTTAAGGGTGCATCTCCTATTGTTGTG
CTCATATATATTGAACTATTGATATGTTTATCGCTTATTTTCCTATGTTAGCATGAATATGTTTTTCTCCGGGTCTTAGG
TAGAAAATAGGAATGCTGTGTGTGCCTCATTGTTGTCATCTTGGCTCTTCCTATTTTCGAGGATTATGCTGTACTATCAG
TCATGTTCCTTTCAGTAAATTACACTTTGGATCACGTATTTCGACCCGAGTTGCAATTCTGCCACATTAGATAAAATAGA
TATTACAGATAGCTTGGCGCCCTGAATTTAGAGTCAGGAAGTTCCATCCCTTTTCTTTTTCCAGGATGGGTT
>chr2D_221
CTTGTACTGATGCCTTAGGGTGAAAATAGTTATTAATAACTGTTTAGACTATCATGATATTTATCTGTGGTACCTCTTAC
AAGTTTGATAGGTTTTTGGAGAAGTTTATCTTACAAGTTGTAAACCAACTGATGCACTTGCGTTTTCTGCTTGGTTTATG
TTATACCAGTCCATTATGGCTACGGTGTTCAAATATGTTACCCTGATACGTACCAAGTCCTTTTTACTTGTGGTTGACCC
AGCCAGACCTCAGGTCTCCAATGTTCAGATGTATACCCTGACATATCCAGTATATATATCTACAATGTTCAAATGGTTGA
AAGGTTTGCTTAAAGTGTTTTTTTGCTGGAAAGTATAAACTTTGTTGCTTTCGACTAAGTTCTTTCAATTTTATAAGTGG
TAAAGATTAAATTTAGCTCTGCATAAGCAAACCTTTTCTTGTTTCCCGGCTGATTTGAGCAATCAGCACTCCACACAGTG
TCAAGTTTGAAGTGAGCGTCTAGTGAAATTCAGTTGTTTGCATCTTTTTCAGTTTGTACAACTTCTCTTATCAGCTGTTC
TATCCCTCCAGCATATCTGTCCTGTTAATAATGATGGGCGCTCCATACTATAGAATTGGAAAAGAGTTCTAGTAGTGTCC
TCGAACATCCTTTTGGACGCGTGCTCAGTCCTGGTCAGGAAACTTTTAGTGCAATATACCAATGATGATTACGATGTGTT
GCACTTGATTCTTATATACGTCGATCTGATATATACGTCGATATGATATATACTTGACCATACTCATTCCGTCCTGCTCT
GTTTTTTTCTTTTTGCGGATGATCCTGCTCTGTTTTTTGTTCAATGATCACTCATCATTCACTAAATTATATCTGGCAAT
CCAGCTCTTCGGCAAGGGAAACCGGGATTTGGTTCACTTCAACATGGACATAGGTCAAATCCGGGTCGACTACGCCATGA
ACGCCTTCAGTCGCAAGACCTTGTACTTTAGCATCAACAGTGGTTGTTCAGGCTCATAATAGATCATCAAAGGTACATAG
CTGGCATAACATAGTTACAAGCCATAACATGAGATCGCCTCTCCATAGCTTTCCATTCCAACATGCCTCGACGCAACAAG
CTGGTGCCCGAGGCATTCGAAGGCTGTACAGTCAAGATTGTTGTTGTCTTCTGCTGGATGCTGAAACAGACAAGACAAGC
CGTGAGATGACAAGTGCAGAGAGCAGAGTTGTGGCTTGCGGAAAATCTGAGATTCTCAAAAAGTAAATTGGTATATGTGG
TTGTCGAGAAGACATTCGAATATGGCATACACCAAGGAAAATGCTTTGTACGCGAATATTTAAAAAATATGGCTCCGGAA
CTACTTTGTAGGTCAGTGTTATCGTATATTATATTTAATATATAAATACGTATTAGTTAAGACATGATTTTCGTATGTAT
TCATCTCAACAATCATACATAGCTACTAAAACAAATTTAAACAATCATCTAATAATATTTCATATGTGAGTATTATTACA
TAGACACAAAATCCTATGCAAGCATGATTTACAATACAAATCAACAACTCACATTTTCCCCAATGATTACAACTCATCTA
CAAAGCCTAAATCACCCCCACATTATTTCAATTTCTCATAGAAAATTTGAATCCATAAAAAACTAGGGTTTCACCCAAGG
ATAAATAATGGGAAGGATTTTTCAGATGAAAAGGAGGGAAGCAGAGTAGAACTTCTGGGAGGGATTATGGTCGAAATCCA
CAGAGGAAAAAAAACAAACTTCTGAGAGGGATTATGGTCGAAATTCACAGAGGAAAAAAACAAAGCCTAAATTCACAGGG
GAGAGGAAATCGCGGCCACCCCTCTCAGCCTCTTTGTTCGTGGAAGGGGTGTGTGGGTTGGTGGGAGGGATGGCTCGCGC
CGGTTACTAAGTGGCAGTATAGCGCCCGACAAAGAGGTGCCATGCAGGTAGGATAGTGCCCGAGCCTTGGGCGCTACTTA
GCCAAAGGCGCGGCCCATCATGGCCTCGTGACGCCACACTGGCAAAGGCGTGTAGCGCCCGTCAGAACGGCGCTACGGCA
CAAAGCATAGCATCTACGCGTTGGACGTTGCCCGAAAGGGTAGCTCCACCTTTGGGTTATTCTTGTCCATTTTGCCCATG
TGCACACTGTTTATTCATTCGTGGATAAAATGTTTGACCTAACTATTTGTAGCAAAAGGTTATATTTTGCCATTTTTGAT
GCGGATGAGTGTCCGAAAGGTAATAAAGGAAAGTTGTTGCAAAATAGCCCTAATTTGGGTTATTTTCTTCAAATTTTCGG
CCTAGCATATTTTTGGGCAAGTTTTTTTTTTTTTGAGTAACTAGAAACCAGGTATCCATGGGTCGAATCCAGCCCAGAAA
AGGGTAAAGCCCAGACCGAACTGAATTAACAACGTTTAGCCCGTTTCATCCAATCAGTGCCAGCCCAAAAAAGGCCATGT
TGTGAAAAAAATAGCAATCCCTCAAAAAGGAAAAATAGCACGGCCCATTAACGTTCTGTAATGTATGTAATATACGAGTA
TAAGAGAAGAGAAGAGAAGAGAAGAGAAACCCTAACTGACCCGATCCCCTTTGGGCAGGCCGCCGCCGCCGCCGCCGCCG
GCGGCGACAACCACTCCCCGCCGCCGGCCCTTGCCTCCTCCGTCCAGGGGTATGTCCTTGGGCTCACGGGATTCCTTCCT
TGTGTAATCGTGCTAGAAAGGAAGTGGCTCGATTTCCGTCTGGATTCAGATCCCAAGCGGACTCCAAAAGGAACTCTATT
TATTTATTAGTAGCAAAGTTTGTTTGTGACCCGAGATATTGTTAGTAATCATTAGGATGTGATCGAGTCCTCCTATTCGT
GTGCTGCCCTTGTTAGCGGACTAGCCGCAGCAGATTTCGACTTCTTTGATCCATCTATAATAA--------GGCCAATTG
GAGATTTTGC-GGAGATGGAAAACAATAATGTAAGCGCCTTTTTTCTTTC----ATGTTTTCTCCTCCTTTGTTCATGTC
CACGAGGCTCATTTTCTTTCCTTGGTTAATGTGATGATGCAGAAA---------------------------GCCGAAGC
CCAACTTGACAGTCTTAGCAAGCTGCCGGATCACCTTCTACTCAACATATTGGAGAGGGTTGAAACGCTAGATGCCTTGA
GAACCTGCATCCTGTCTAAGAGGATGCTAAAGCTTCCCCCCATGCTGTCGCTGCTTGATATAGATATTGGTTCCCTTGCG
CGTTACCTCAAGCCCGATGTCGACACCTTTAATCGTATTTTTCAGTA---------CAACATTGCTGTGGCTGCTACCAC
GGACAAGATACTTGGTGCGAGGAATCCCGAGATCCCCATCCGCGAGCTGAGGGTCAGGTTCTG--------------TTT
GAGGCATGATGAGTGTCTCTCCATCAGCCAAGCTGTTGCCCGCACCATGGCAACCCAC---AAGCTCGATGTCGCTGAGT
TTGTCGTCCTCACGGAGAAGACTAGTTGGAGATGCACTCAACATGATCTCCTCTCCTTTG--CCAAGCGGTTCAATACTT
GGTTTGGTGATTGTCCAGTTGTGTTTGCTGGTCTCACGCACCTGTGGCTGCGGAATTTGAGGTTTGGTGAACTGGACATC
CACAACATCCTCAACACCTGCAAGCGCTTGGAATCTCTGCGTCTCACCCATTGTGACGCAGGGGTCCGCTCCGTGCTTCA
AGTACAGCATGCTCAACTTGTTGCGCTCCAGATCGACTATGGGGAATTTGAAGCCATCCAACTCAACTGTCTACCAAAAC
TCCAACGTGTCAAATATGTTGGTTGGTCTTACCAAGAAGATCCCCTGATTTTTGGTTCTGTCCCGCAGCTTTCAAAGCTA
ATCCTTGGAAATGTTGGTGTTAGTTCGACTAGTAATATTCAGTTAAGTCAGCTCCTTGCTAATGTACCCTGGATAACTGA
CCTGCGTCTGGATTTTCAAAGTGAAAAGGTACTCACTAGTCATCC--------------------------ATATATGTC
TTATTCCTATTTATGTGCTTATAATAGTAA--------------------------------------------------
------------TATTAACTTAACTGAGTCCCTTTTCTAGCTCTTGAGGGTGTAATGTAATTTGTTTGCAGTTTGTACAC
AATTATTAATTTGCTTCTGCT-----GTGCCAGATTTGGGTTTTACCTGAGTGCCCTAAACTGCTTGCACCTGTGCTTGG
CAAGCTACAGATTGTGAATCTGGATAATCTTCCTCAAGGATGCAATATTGATTGGACCATGTTCATTCTTGAAGCTGCAA
GCTCCCTAAAGGAGCTATGCATCACGGTGTGGGATCATTGGTGTGAAATGGAGACAAACAAGGATGTTCGAAGGAAAAAG
GGTTACTGTGAGAAAGCAAACGTGGAGTGGCAACCATCTGCT--------GTTCATTTTAAGCACAAGAATCTGGTTAAG
CTCACCATCTGCGGCTTCCAACCTGAGGAGAACTTTGTGCGGTACATTAGGCGTGTCATGGAAATCGCGGTGAACATGAA
GGAGATATCTCTGTACGACTGGCAGGTGTGCGAGGACTGCGGTGACTTGGATCCCAATATCAAGGTCTGTCCTTCTCGGT
ATCCACGGACCACTGAGGAGAAGGATATGTTGAGGGAGGAGATTACTAAGGAGTTGCCGATGGCTTCGCCTGCTGTGATT
CACTTCAGGTCCTAATTAATAATTGAAGAATAAGATGCATGGTGTCATCAGTAAAATCTAGATTCCATGT---------A
A-TCATTCATGGCATATGTACTCTTATTTCTCGGCTATGTAGCTGCAAGGAGCTTCTGTGCTCGCTCCATAATTCAGTAG
TC-CTGTATTTGTATTATTATTTATTTATCCCTCAACTGAAGCTTGTACTGATGCCTTAGGGCGAAAATAGTTATTAATA
AATGTTTCCAAGG-------------------------------------------------------------------
-------------------TTGTGTTTTCTGCTTGGTCTATGTTATACCAGTCCATTATGGCTATGGTGTTTGATTGTGT
TAGCCTGATGCATACTAAGTACTCCCTCTGTACCGAAATACATGTCGCTGGACTAGCTGAGCTCAGCTAGTCCAGCGATA
CAGAGGGAGTACTTTTTACTTGTGGTTGACACAGACAGACCTCAAGCAGGTGTCCAATGTTGAGATGTATTATTACTTAT
TAGCCTGACATATCCAGTATATGTGACTAGAATGTTCAAATGGTAGAAAGGTTTGCTTAAAGTGTTCTTTTTTTGCTTGG
AAGTACTCCCTCCGTTCCTAAATATAGGTCTTTGTAGAGATTTCAACGGGTGACTACATACGGAACAAAATGAATGAATC
TACGCTCTAAAATATGTCTATATACATCCATATGTGGTAGTTCATTTGAAATCTCTAAAAAGACTTATATGTAGGAACGG
AGGGAGTATAAACTTTCTTCCTTTGAACCAAGTTGTGTC-------AAAGTGGTACAGATTAAATTTATGTCCGCATAAG
CAAAAACCTCTTATTGAATCAGTAATGTTAAATGCATGCATGGAAATTGATTTGTTT-----------------------
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>chr3B_231
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----------TAGCAAAGTTTGTTTATGTCCCGAGATGTAGTTATTAATC---AGGATGTGATCGAGTCGTCCAATTGTT
GTGCCACCGTTGTTAGCGGACTAGCCGCAGGAGATTTCGACTTCTTTAATCCATCTAATAAGGCTATCCCTGGCCAATGG
GAGAATTTGC-GGAGATGGAAAACAATAATGTAAGTTTTTTCCTCTATATATATATGCTTTCTCCTCCTTTGTTCATGTC
CACGAGGCTCATTTTCTTTCCTTGATTAATGTGATGCAGAAAGCCACAGCTCGCCGCCGTGAAGCAGCTTCTGCCGAAGC
CGAAGTTGATAGGCTTAGCAAGCTGCCCGATCACATTCTACTCAACATCCTGGAGAGGGTTGGCACGCTAGATGCCTTGA
GAACCTGCATCCTCTCCAAGAGAATGCTCAAGCTTCCCCTCATGCTCTCGCTGCTTAACATAGACATTGGTTCCCTTGCG
CGTTACATCAAGCCCAATGTCGACACCATTGATCGTATTTTTCAGTA---------CAACATTGCCGTGGCTGCTCACAG
AC--AAGGTCCTGAGTGCGAGGAATCCCGAGATCCCCATCCGCAAG--------------CTGAGGGTCAGGTTCTGTTT
GAGGCCTGATGAATGTCTCTCCATCAGTCAAGCCGTCGCCCGCGCCATGGCAACCCACAAGAAGCTCGACGTTGCTGAGT
TTGTGGTCCTCACGGAGAAGATTTGTATGAAATGCACTGAAGACCATCTACTCTGCTATG--CCAAGCGCTTCAATACTT
GGATTGGTGATTGTCCAGTTGTGTTTGCTGGTCTCACACATCTGTGGCTGCGCAATTTGAGGTTTGGTGAACTGGACATC
CCCAATATCCTCACCACCTGCAAGCGGTTGGAATCTCTGCGTCTCACCTATTGTGACGCAGGGGTCTGTTCCGTGCTTCA
AGTAGAACATGCTCAACTTGTTGAACTCCACATCGACTATGGGGAATTTGAAGCAGTCCATCTCAACTGCCTACCGAAAC
TCCAACGTGTCAAATATGTTGGTTGGTCTTACCAAGAAGATCCCCTGATTTTTGGTTCTGTCCCGCAGCTTTCAAAGCTA
ACCCTCGAACAAGTTGGTGTTAACTCGACTAGTCATATCCAGTTAAGTCAGCTCCTTGCTAATGTACCCTGGATAAGCGA
CCTCCGTCTTGATTTTAAAAGTGAAAAGGTACTCACTAACCGCCA-----------------------TCTATATATGTT
TCATTTCTT-TTAATTGCTTATAATAGTAAATACTCCCTCCGTCAGGAAATACTTGTCCATTTCTCGGACAAGTATTTCC
GGATGGAGGGAGTACTAACTTAAGTGACTCT-TTTTCTAGCTCTTGAGGCTGTAATGTAATTTATTTGCACAATT-G---
--TTATTAATTTGCTTCTTGTGTGCCATGCTAGATTTGGGTTCTACCTGAACACCCCAAACTGCTTGCGCCTGTGCTTGG
CAAGCTACAGATTGTGAATCTGGGTAATCTTCCTCAAGGATGCGATATTGCTTGGACCATGTTCATTCTTGAAGCTGCAA
GCTCCCTAAAGGAGCTATGCATCACGGTGTGGGATCATTGGTGCAAAATGGAGACAGACAAGGATGTCCGTAAGGAACTT
GGTTACTGTGAGAAAGCAAATGTGGAGTGGCAAACTGGCAACCATCCACAGTTCATTTTAAGCACAAGAATCTGGTTAAG
CTCACCGTCTACGGCTTCCAACCTGAGGACAACTTTGTGCGATACGTTAGGCGCATGATGGAAATTGCAGTGAACATGAA
GGAGATATCTCTGTACGATTGGAAGGTGTGTAAGCGCTGCAGGGACTTGGATCCCAGTATCAAGGCCTGTCCTTCTCAGT
ATCCACGGACCAGTGAGGAGAAGGATATGTTGAGGGAGGAGATCACTAAGGAGTTGCCGATGGCTTCGCCTGCCATGATT
CACTTCAGGTCCTAATTAATAATTGAAGAATAAGATGCATGGCGTCATCACTAAAATCTAGAGTCCATGT---------A
AATCATTAATGGCATATATACTCTAATTTATCATCTATGTAGCTGCAAGGAGTTCCTGTGGTCCCTCCATAATTCAGTAG
TCACTGCATTTGTATTCTTATTTATTTATCCCTCAACTGTAGCCTGTACTGATGCCTTAGGGCGAAAATAATTGTTAATA
AATGTTTTGAATATCATGATATTTATCTGTGGCATCTCTTACAAGTTTGATAGGTTTTTAGAGAAATTTATCTTACAAGT
TGTAAACCAACTGATGCACTTGTGTTTTCTGTTTGCTCTATGTTATACC----CATTATGGCTACGGTGTTCAAATGTGT
TAGCCTGATGCGTACTA---------------------------------------------------------------
-------AGTCCTTTTTACTTGTAGTTGACCCAGCCAGACCTCA----GATCTCCA------------------------
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>chr5B_519
GATGATGCAGA---------------------------------------------------------------------
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--AAGTTGACAGTCTTAGCAAGCTGCCGGATCACCTTCTACTCAACATATTGGAGAGGGTTGAAACACTAGATGCCTTGA
GAGCCTGCATCCTGTCTAACAGGATGCTCAAGCTTCCCCCCATGATGTCGCTACTTGATATAGATATTGGTTA-------
------CTCAAGCCCGATGTCGACACCTTTAATCGTATTTTTCACTA---------CAACATTGTTGTGGCTGCTATCAC
GGACACGATACTTGGTGCAAGGAAACCCGAGATCCCCATCCGCAAG--------------CTG--------------TTT
GAGGCATGATGAGTGTCTCTCCATCAGCCAAGTCGTCGCCCGCACCATGGCGACCCAGAAGAAGCTCGACATCGCTGAGT
TTGTCGTCCTCACGGAGAAGACTAGTTGGAGAGGCACTCAACATGATCTCCTCTCCTTTG--CCAAACGGTTCAATACTT
AGTTTGGTGATTGCTCACTTGTGTTTGCTGTTCTCACGCACCTGTGGCTGCGCAATTTGAGGTTTGGTCAACTGGACATC
CACAACATGCTCAACACCTGCAAGCGCTTGGAATCTCTGCGTCTCACCCATTGTGACGCAGGGGTCTGCTCCGTGCTTCA
AGTACAACATGCTCAACTTGTTGCGCTCCACATCGACTATGGGGAATTTGAAGCCATCCAACTCAACTGTTTACCGAAAC
TCCAACGTGTCAAATATGTTG-----------------------------------------------------------
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>chr6B_537
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----------AGGCTTAGCAAGCTGCCGAATGATCTTCTGCTCAACATTCTTGAGAGGGTGGACACGCTCGATGCAATAA
GGGCCTGCGTCCTATCCAAGCAAATGCTGAAGCTCCCCGCCATGTTCTCGCGCTTCTTCATAAGTTTTGATTCCATTCCA
GCTTACCATGATAAAGCTCGTCTTCCCAGCCTCAGCCTCAGTGACGTGTTCCGAACCAACAGTGCTGTGGCTCATGTCAC
GGATAACATCTTGAGCACAAGGAGCCCGGTGATCACCATCAGCAAA--------------CTCAAAATCAGATTCATCTT
GATGCAACAGGACTCTCTCACCATTGGCAAATCTGTGGCCTGCGCCATGGCAACCAACAAGG---TTGACGCAGCTGAGT
TTGAGATTGTAACGGAGAAGCCTTACAAGATATGCTCTTCTGCTGATCTCCTCCGCTATG--GGAAGCAGTTCAATGATT
TTGTCGGTGCTTGTCCGGATGCATTTGCTGGCCTTAGGCGTCTGTGGCTCCGCAATATGAGGTTTGGTGAACTGGACATT
CCCAACATCCTCAGCACTTGCAAGCTCTTGGAGTCTTTGCGTTTAAGCCATTGCGACTCGGGGATCCATTCTGTGCAGCA
AGTAGAGCATGCCCAACTTGTTGAGCTCCAAGTTGACAATGGGAAATTTGAGAGAGTTGAGCTGATATGTCTACCGAAAC
TCCAATGGGTGACCTATACTAATTGGTCCTCTTATGAAGATCCCATATATTTTGGTTTTGTGCCACAGCTTTCAAAGCTG
AGCCTTGTTAAAATTGGCGTCGGTTCGCAGAAGACCCTTGAGTTAAGTCAGCTACTTGCTAATGTTCCTTCCATAAGCGA
ACTATATCTGGATTTTAGAACTGAGAAGGTACCCA---------------------------------------------
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>chr6B_777
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-------------------AGGAGCCCGGAGATCACCATCAGCAAT--------------CTCAGAATCAGATTTATCTT
GACGCAAGATGACTCTCTCACCATTGGCAAATCTGTTGCCCGTGCCATGGCAACCCGGATGG---TTGACGCAGCTGAGT
TTGAGATCACAACGGAGAAGGCCTATAAGATATCCTCTCCCGACGATCTCCTCCGCTTTG--GGAAGCAGTTCAATGATT
TTATCGCTGCTTGTCCGGATGTATTCGCTGGCCTTAGGCGCCTGTGGCTGCGCAATATGAGGTTTGGTGAACTGGACATA
CCCAACATCCTCAGCACTTGCAAGGTCTTGGAGTCTTTGCGTTTAACCTATTGCGACTCAGGGATCCTTTCTGTACTCCA
AGTAGAACATGCTCTACTTGTTGAGCTCGAGGTTGACTATGGGCAATTTGAGAGAATCGAGCTGATATGTCTACCCAAAC
TCCAACGGGTGAGCTATACTGGTTGGTACTCTCATGAAGATCCCCTTCATTTTGGTTTTGTACCGCAGCTTTCAAAGCTG
AGCCTCACTAAAACTGGCGTCTCTTCGGATAAGACTCTTGAGTTAACTACGTTCCTTGCTAATGTTCCTTCCATAACCGA
TCTGCATCTGGATTTTAGAAGTGAAAAGGTACTCATTAG-----------------------------------------
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>chr6A_777
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-------------------AGGAGCCCGGACATCGCCATCAGCAAA--------------CTCAGAATCAGATTTATCTT
GACGCAAGATGACTTTCTCACCATTACCAAATCTGTTGCCCATGCCATGGCAGCCCGGAAGG---TTGACGCAGCCGAGT
TTGAGATCACAACGGAGAAGGCTTATAAGATATCCTCTCCTGATGATCTCGTCCGCTTTG--GGAAGCAGTTCAATGATT
TTATCGGTGCTTGTCCGGATGCATTTGCTGGTCTTAGGTGCCTGTGGCTGCGCAACATGAGGTTTGGTGAACTGGACATT
CCCAACATCCTCAGCACTTGCAAGCTCTTGGAGTCTCTGCATTTAACCTATTGCGACTCAGGGATCCATTCTGTACTCCA
AGTAGAACATGCTCTACTTGTTGAGCTCGAGGTTGACTATGGGCAATTTGAGAGAATCGAGCTGATATGTCTACCCAAAC
TCCAACGGGTGAGCTATACTGGTTGGTACTCTCATGAAGATCCCCTTTATTTTGGTTTTGTACCACAACCTTCAAAGCTG
AGCCTCACTAAAACTGGCGTCAGTTCGGATAAGACTCTTGAGTTAACTATGTTCCTTGCTAATGTTCCTGCCATAACCGA
TCTGCATCTGGATTTTAGAAGTGAAAAGGTACTCATTAG-----------------------------------------
--------------------------------------------------------------------------------
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>chr6D_777
--------------------------------------------------------------------------------
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-------------------AGGAGCCCGGAGATCACCATCAGCAAT--------------CTCAGAATCAGATTTATCTT
GACGCAAGATGACTCTCTCACAATTGCCAAATCCGTTGCCCGTGCCATGGCGACCCGGACGG---TTGACGCAGCTGAGT
TTGAGATGACAACGGAGAAGGCTTATAAGATATCCTCTCCCGACGATCTCCTCCGCTTCG--GGAAGCAGTTCAATGATT
TTATCGGTGCTTGTCCGGATATATTCGCTGGCCTTAGGCGCCCGTGGCTGCGCAATATGAGGTTTGGTGAACTGGACATT
CCCAACATCCTCAGCACTTGCAAGCTCTTGGAGTCTTTGCGTTTAACCTATTGCGACTCGGGGATCCATTCTGTACTCCA
AGTAGAACATGCTCTACTTGTTGAGCTCGAGGTTGACTATGGGCAATTTGAGAGAATCGAGCTGATATGTCTACCAAAAC
TCCAATGGGTGAGCTATACTGGTTGGTACTCTTATGAAGATCCCCTTCATTTTGGTTTTGTACCGCAGCTTTCAAAGCCG
AGCCTCACTAAAACTGGCGTCTCTTCGGATAAGACTCTTGAGTTAACTACGTTCCTTGCTAATGTTCCTTCCATAACCGA
TCTGCATCTGGATTTTAGAAGTGAAAAGGTACTCA---------------------------------------------
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------------------------------------------------------------------------
>chr2A_965
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----------------------------------------------------------------AAGCAGTTCAATGATT
TTGTCGGTGCTTGTCCGGATGCATTTGCTGGCCTTACGCGCCTGTGGCTGCGCAATATGAGGTTTGGTGAATTCGACATC
CCCAACATCCTCAGCACTTGCAAGCTCTTGGAGTCTTTGCGTTTAAGCCATTGCGACTCAGGGATCCATTCTGTGCTGCA
AGTAGAACATGCTCAACTTGCTGAGCTCGAGATCGACCAGGGGAAATTTGAGAGAGTTGAGCTGATATGTCTACCAAAAC
TCCAACGTGTGAGATATAATAATTGGTGCTCTTATGAAGATCCCCTATATTTTGGTTTTGCACCACAGCTTTCGAAGCTC
ATCCTCACTAAAACTGCTGTCCGTTCGCAAAAGACCCTTGAGTTAAGTCAGCTCCTTGCTAATGTTTCTTCCATAAGCGA
TCTTCATCTGGATTTTAGAAGTGAAAAGGTACTCATTAGTCATTTGAATCATATCTGTCCATTCTTGCTCTATATATGAT
GGTTATATATGTA---------AATAACAA--------------------------------------------------
------------TGGTAACTTAAGTTGGTC--TTCTCCGCTAGTTGAGAATGTGATCTATATGAAACCTGCACTGAG---
--TTTGTAAATTGTTTTT-CT-----GTCCCAGATTTGGGTCCTGCCAGAATGCCCAAAACTGCTCACGCCTGTGCTCAG
CAAACTACAGCATGTGAATCTGGACCATCTTCCTGAAGGCTGTGATTTAGCTTGGACAATGTTTATTCTTGAAGCTGCAC
CCTCTTTAAAAGAGCTGTGCATCACATTATGGGATCATTGGTGCATAATGGCGACAGACAATGAGTTTCGGAAGAAATAT
GGTTTCTGTGAAAAGATCGACATGAAGTGGAAGCCATATGCCCCTG--------ATTTCAAGCACAAGAATCTGGCTAAG
CTCACCATCTATGGCTTCCAACCCGACGACAACCTTCTGCGATACATTAGGTCTGTCATGGAACATGCGGTTAATATGGC
AGAGATATCTCTGCATGACAGGAAGGTGTGTGTGAGCTGTAGTGACTTGGATTCTGAGATCAAGG---------------
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>chr7A_965
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----------------------------------------------------------------AAGCAGTTCAATGATT
TTGTCGGTGCTTGTCCTGATGCATTTGCTGGCCTCAGGCGCCTGTGGCTGTGCAATATGAGGTTTGGTGAACTGGACATC
CCTAACATCCTCAGCACTTGCAAGCTCTTGGAGTCATTGCGTTTAACCGAATGTGATGCAAGGATCCATCCTGTGCTGCA
AGTAGAGCATGCTGAACTTGTTGAGCTTGAGATCGACTATGGGGAATTTGAGAGAGTTGAGCTGATATATCTACCAAAAC
TCCGACGGGTGAGATATAAGAGTTGGTTCTCTTATAAAGATCCCGTGTATTTTGGTTTTGTACCACAACTTTCAAAGCCG
AGCCTCAGTAAAACTGGCACCCGTTGGGATAAGACTCTTGAGTTAAGTCAGCTTCTTGCTAATGTTCCTTCCTTAAGCGA
TCTGCATCTGAATTTCGAAAGTGAAAAGGTACTCACTAGTCATTTGAATCATATCTGTCCATTCTCACTCTATATATGAT
GGTTATATG------------TAATGACAG--------------------------------------------------
------------TATTAACTTAAGTTGGTC--TTCTCTGCCAGTTGAGAATGTGATTTACTTGAAACTTACGCTAAG---
--TTTGTAATTTGTTTTT-CT-----GTCCCAGATTTGGGTCCTGCCAGAATGCCCGAAACCGCTCAAGCATGTGTTCAC
CAAATTACAGCACGTGAATCTGGACCATCTCCCTGAAGGACGTGATTTAGATTGGACAATGTTTATTCTTGAAGCTGCAC
CCTTTCTAAAAGAGCTGTGCATCACAGTATGGGATCATTGGTGCATAATGATGACAGACGAAAAGTTTCGAAAGGAAAAT
GGTTACTGTGAAAAGGAGGAGGTGAAGTGGAAGCCATATGCCCCTG--------ATTTCAAGCACGAGAATCTAGTTAAG
CTCACCATCTATGGCTTCCAACCCGACGACAACTTTGTGCGGTACATTAGGTTCGTCATGAAACATGCGGTCAATATAAC
AGAGATATCTCTGCATGACAGGAAGGTATGT-------------------------------------------------
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>chr2D_1004
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-----------------------TTTGCTGGCCTTACGCGCCTGTGGCTGCGCAATATGAGGTTTGGTGAATTCGACATC
CCCAACATCCTCAGCACTTGCAAGCTCTTGGAGTCTTTGCGTTTAAGCCATTGCGACTCAGGGATCCATTCTGTGCTGCA
AGTAGAACATGCTCAACTTGCTGAGCTCGAGATCGACCAGGGGAAATTTGAGAGAGTTGAGCTGATATGTCTACCAAAAC
TCCAACGTGTGAGATATAATAATTGGTGCTCTTATGAAGATCCCCTATATTTTGGTTTTGCACCACAGCTTTCGAAGCTC
ATCCTCACTAAAACTGCTGTCCGTTCGCAAAAGACCCTTGAGTTAAGTCAGCTCCTTGCTAATGTTTCTTCCATAAGCGA
TCTTCATCTGGATTTTAGAAGTGAAAAGGTACTCATTAGTCATTTGAATCATATCTGTCCATTCTCGCTCTATATATGAT
GGTTATATATGTA---------AATAACAA--------------------------------------------------
------------TGGTAACTTAAGTTGGTC--TTCTCTGCTAGTTGAGAATGTGATCTATATGAAACCTGCACTGAG---
--TTTGTAAATTGTTTTT-CT-----GTCCCAGATTTGGGTCCTGCCAGAATGCCCAAAACTGCTCACGCCTGTGCTCAG
CAAACTACAGCATGTGAATCTGGACCATCTTCCTGAAGGCTGTGATTTAGCTTGGACAATGTTTATTCTTGAAGCTGCAC
CCTCCTTAAAAGAGCTGTGCATCACATTATGGGATCATTGGTGCATAATGACGACAGACAATGAGTTTCGGAAGAAATAT
GGTTTCTGTGAAAAGATCGACATGAAGTGGAAGCCATATGCCCCTG--------ATTTCAAGCACAAGAATCTGGCTAAG
CTCACCATCTATGGCTTCCAACCCGACGACAACCTTCTGCGATACATTAGGTCTGTCATGGAACATGCGGTTAATATGGC
AGAGATATCTCTGCATGACAGGAAGGTGTGTGTGAGCTGTAGTGACTTGGATTCTGAGATCAAGG---------------
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------------------------------------------------------------------------
>SNPs
--SS--S--SS-S-SS-SSSS-SSSSSS-S-SSSS--SS-SSSSSSSSSSSS-SS--S-SSS-S--S-SS-SSS--SS-S
SSSSSSSS-SS-SSSSSS-SSSSSS-S-SSS-SSS-SSS-S---S-SSSSSS-SS-SSSSSSSSS-SSSSSSS-SSSSSS
-S-S-SS--SSSSSSSSSSS-S--SSS-SS---S-SSSS-SSSS--SS---SSSSSS-SS-S------------------
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---------S--------------------S-----------S--------------------S----------------
---------------------------------S-------------------------S-------------------S
-S--S-----S-------------------------------------------------------------------S-
--S----------------------------S--------------S-------S---SS-----------S-SS-----
S--------------------------S------S--------------------------S-----S------------
--------------------------------------------------------------------------------
-----------------S----------S--------------------------------S-----------------S
S--S-------------S---------S----------------------------------------------------
---------------------------------------------------------S----------------------
------------------S------------------------------------S----SS---------------S--
--S---------------SS------------------------------------------------------------
---------------S----S---S--------------------S----------------------S-----------
-----------------------------------------------------------------S--------------
------------------------------------------------------S-------------------------
--S----------S------------S-----------------------------------------------------
-----------------------------------S--------------------------------S----S------
-----------------------------SS-------------------------------------------------
---------------S------S---------S------------------------------------S----------
----------------------------------------------------------S--------S------------
---------------------------------S--------------S--------------------------S----
--------------------S------------------S----------------------------------------
----------------------------SS----------S---------------------------------S-----
--------S-----------------------------------------------------S------------S----
---------------------------S----------------------------------------------------
-----------------S------------------S-------------------SSS---------------------
---------------------------S----------------------------------------S-SSSSSSSSS-
------------------------------------------S-S-----------S------S----------------
-------------------------------------S-------------------------S----------------
---------------------S------S--S--S------------------------S--------------------
------S-------S---------------------------------S------------S------------------
--------------------S-----------------------------------------------------------
----------------------------------------------------------S--S----S------S------
-------------S--------S-SSS--S----S------------------S------S--S--S---S-S-SS-SS-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------S--S-S---S-----S----SSSSSSS---------S------------S---S-------
------------S----S-------------------------------S---S--SSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_3298
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------------------------------------------------------------------------------CG
CGTTACATCAAGCCCAAG--------------------------------------------------------------
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------------------------------------------------------------------------
>reverse_5127
--------------------------------------------------------------------------------
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------GCAACTGACGCACTTGTGTT------------------------------------------------------
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------------------------------------------------------------------------
