Multiple sequence alignment - TraesCS5A01G061500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G061500 chr5A 100.000 2822 0 0 1 2822 64983244 64980423 0.000000e+00 5212.0
1 TraesCS5A01G061500 chr5A 98.333 60 1 0 770 829 7540191 7540132 3.840000e-19 106.0
2 TraesCS5A01G061500 chr5A 100.000 28 0 0 2275 2302 45277415 45277442 5.000000e-03 52.8
3 TraesCS5A01G061500 chr5D 93.536 2135 83 19 1 2104 72548998 72546888 0.000000e+00 3127.0
4 TraesCS5A01G061500 chr5B 89.857 2445 142 48 1 2379 81395817 81398221 0.000000e+00 3044.0
5 TraesCS5A01G061500 chr3B 96.711 304 10 0 2432 2735 449806546 449806849 9.020000e-140 507.0
6 TraesCS5A01G061500 chr3B 87.379 206 26 0 228 433 191252399 191252604 1.310000e-58 237.0
7 TraesCS5A01G061500 chr3B 96.203 79 3 0 751 829 273555002 273554924 2.280000e-26 130.0
8 TraesCS5A01G061500 chr7B 96.393 305 11 0 2431 2735 728122408 728122712 1.170000e-138 503.0
9 TraesCS5A01G061500 chr7B 96.203 79 3 0 751 829 441433814 441433892 2.280000e-26 130.0
10 TraesCS5A01G061500 chr1B 95.820 311 11 2 2427 2735 683991865 683992175 4.200000e-138 501.0
11 TraesCS5A01G061500 chr2A 95.806 310 12 1 2431 2740 743327489 743327797 1.510000e-137 499.0
12 TraesCS5A01G061500 chr2A 96.053 304 12 0 2431 2734 51641556 51641253 1.950000e-136 496.0
13 TraesCS5A01G061500 chr6B 95.513 312 11 3 2430 2739 675395931 675396241 1.950000e-136 496.0
14 TraesCS5A01G061500 chr4B 96.040 303 12 0 2433 2735 814407 814105 7.020000e-136 494.0
15 TraesCS5A01G061500 chr2D 96.053 304 11 1 2431 2734 618294475 618294777 7.020000e-136 494.0
16 TraesCS5A01G061500 chr2D 87.179 234 25 3 347 577 437713879 437713648 7.750000e-66 261.0
17 TraesCS5A01G061500 chr2D 98.333 60 1 0 770 829 437713613 437713554 3.840000e-19 106.0
18 TraesCS5A01G061500 chr2D 81.176 85 14 1 2256 2340 620292207 620292289 1.810000e-07 67.6
19 TraesCS5A01G061500 chr2B 95.469 309 12 2 2427 2735 142654830 142654524 2.530000e-135 492.0
20 TraesCS5A01G061500 chr3D 87.374 198 25 0 236 433 135129847 135130044 7.860000e-56 228.0
21 TraesCS5A01G061500 chr3D 86.713 143 19 0 235 377 135142987 135143129 2.910000e-35 159.0
22 TraesCS5A01G061500 chr3A 86.047 172 18 1 268 433 150066020 150066191 2.230000e-41 180.0
23 TraesCS5A01G061500 chr1A 98.333 60 1 0 770 829 465688302 465688243 3.840000e-19 106.0
24 TraesCS5A01G061500 chr7A 95.000 60 3 0 770 829 149500898 149500957 8.320000e-16 95.3
25 TraesCS5A01G061500 chr7D 85.484 62 6 2 2247 2307 555738873 555738932 8.440000e-06 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G061500 chr5A 64980423 64983244 2821 True 5212 5212 100.000 1 2822 1 chr5A.!!$R2 2821
1 TraesCS5A01G061500 chr5D 72546888 72548998 2110 True 3127 3127 93.536 1 2104 1 chr5D.!!$R1 2103
2 TraesCS5A01G061500 chr5B 81395817 81398221 2404 False 3044 3044 89.857 1 2379 1 chr5B.!!$F1 2378

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
55 56 0.037303 ACCACTTCAGTGCTGATGGG 59.963 55.0 19.87 15.16 41.65 4.0 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1959 2010 0.109873 ACTACGCTACACTGACACGC 60.11 55.0 0.0 0.0 0.0 5.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
48 49 6.392625 TGATATAGACTACCACTTCAGTGC 57.607 41.667 1.01 0.00 44.34 4.40
55 56 0.037303 ACCACTTCAGTGCTGATGGG 59.963 55.000 19.87 15.16 41.65 4.00
76 77 2.030371 TGCATGTTTCAACTTGGAGCA 58.970 42.857 7.47 0.00 35.36 4.26
119 124 0.815734 AAGAACGTGACGATCCGGAT 59.184 50.000 19.21 19.21 29.02 4.18
230 236 3.004629 TGCTGGCTGATAACAACAGTTTG 59.995 43.478 0.00 0.00 37.64 2.93
242 248 2.774439 ACAGTTTGCACGCTTTTAGG 57.226 45.000 0.00 0.00 0.00 2.69
253 259 2.817844 ACGCTTTTAGGGACATTCCAAC 59.182 45.455 0.00 0.00 38.64 3.77
263 269 3.203716 GGACATTCCAACCGTATTCTCC 58.796 50.000 0.00 0.00 36.28 3.71
274 280 7.070198 TCCAACCGTATTCTCCTATGTAAATCA 59.930 37.037 0.00 0.00 0.00 2.57
288 294 3.823873 TGTAAATCAGGGAATTTGTGCGT 59.176 39.130 0.00 0.00 31.50 5.24
290 296 0.527565 ATCAGGGAATTTGTGCGTGC 59.472 50.000 0.00 0.00 33.82 5.34
292 298 0.109597 CAGGGAATTTGTGCGTGCTC 60.110 55.000 0.00 0.00 0.00 4.26
299 305 1.291184 TTTGTGCGTGCTCATCCTCG 61.291 55.000 0.00 0.00 0.00 4.63
301 307 1.738099 GTGCGTGCTCATCCTCGTT 60.738 57.895 0.00 0.00 0.00 3.85
304 310 1.132588 GCGTGCTCATCCTCGTTATC 58.867 55.000 0.00 0.00 0.00 1.75
320 326 7.728981 TCCTCGTTATCAAGGGAAGAATAGTAT 59.271 37.037 0.00 0.00 33.21 2.12
332 338 7.128883 AGGGAAGAATAGTATGTGGGTGTTAAT 59.871 37.037 0.00 0.00 0.00 1.40
334 340 8.621286 GGAAGAATAGTATGTGGGTGTTAATTG 58.379 37.037 0.00 0.00 0.00 2.32
379 385 4.269183 TCTGAACTTGTTGAAAGCAGGAA 58.731 39.130 0.00 0.00 0.00 3.36
381 387 6.061441 TCTGAACTTGTTGAAAGCAGGAATA 58.939 36.000 0.00 0.00 0.00 1.75
384 390 5.695851 ACTTGTTGAAAGCAGGAATAGTG 57.304 39.130 0.00 0.00 0.00 2.74
475 481 1.956477 GCCCTGTGTTTTGTCAGTCAT 59.044 47.619 0.00 0.00 0.00 3.06
509 520 2.962421 TCCAGTTGGGAAAAATGTGGTC 59.038 45.455 0.00 0.00 44.80 4.02
633 644 3.864243 TGAGCAAATTTCAATCCATGGC 58.136 40.909 6.96 0.00 0.00 4.40
651 663 6.765989 TCCATGGCACTCTGTAACAAATATAC 59.234 38.462 6.96 0.00 0.00 1.47
655 667 9.899661 ATGGCACTCTGTAACAAATATACTTAA 57.100 29.630 0.00 0.00 0.00 1.85
675 687 7.608153 ACTTAAAACTTCGGAATAAAATGGGG 58.392 34.615 0.00 0.00 0.00 4.96
676 688 4.465632 AAACTTCGGAATAAAATGGGGC 57.534 40.909 0.00 0.00 0.00 5.80
677 689 3.382083 ACTTCGGAATAAAATGGGGCT 57.618 42.857 0.00 0.00 0.00 5.19
678 690 4.513406 ACTTCGGAATAAAATGGGGCTA 57.487 40.909 0.00 0.00 0.00 3.93
679 691 4.204799 ACTTCGGAATAAAATGGGGCTAC 58.795 43.478 0.00 0.00 0.00 3.58
680 692 2.841215 TCGGAATAAAATGGGGCTACG 58.159 47.619 0.00 0.00 0.00 3.51
681 693 2.171027 TCGGAATAAAATGGGGCTACGT 59.829 45.455 0.00 0.00 0.00 3.57
682 694 2.289547 CGGAATAAAATGGGGCTACGTG 59.710 50.000 0.00 0.00 0.00 4.49
683 695 2.034179 GGAATAAAATGGGGCTACGTGC 59.966 50.000 0.00 0.00 41.94 5.34
695 707 1.822581 CTACGTGCATCAATCGACGA 58.177 50.000 0.00 0.00 35.77 4.20
699 711 1.653609 CGTGCATCAATCGACGAAGAA 59.346 47.619 0.00 0.00 33.64 2.52
700 712 2.092055 CGTGCATCAATCGACGAAGAAA 59.908 45.455 0.00 0.00 33.64 2.52
702 714 3.063485 TGCATCAATCGACGAAGAAACA 58.937 40.909 0.00 3.60 0.00 2.83
704 716 4.024472 TGCATCAATCGACGAAGAAACAAA 60.024 37.500 0.00 0.00 0.00 2.83
803 845 9.922305 CTAAATCCAAAACGAAGAGAACATATC 57.078 33.333 0.00 0.00 0.00 1.63
841 883 4.392940 ACAACCTTCATCTCCAAGACTTG 58.607 43.478 8.31 8.31 0.00 3.16
890 933 4.739793 ACTCCAGGATCTCCTCTATCAAG 58.260 47.826 0.00 0.00 46.65 3.02
891 934 4.169856 ACTCCAGGATCTCCTCTATCAAGT 59.830 45.833 0.00 0.00 46.65 3.16
892 935 5.374154 ACTCCAGGATCTCCTCTATCAAGTA 59.626 44.000 0.00 0.00 46.65 2.24
893 936 6.046643 ACTCCAGGATCTCCTCTATCAAGTAT 59.953 42.308 0.00 0.00 46.65 2.12
894 937 6.489603 TCCAGGATCTCCTCTATCAAGTATC 58.510 44.000 0.00 0.00 46.65 2.24
895 938 6.046049 TCCAGGATCTCCTCTATCAAGTATCA 59.954 42.308 0.00 0.00 46.65 2.15
896 939 6.723515 CCAGGATCTCCTCTATCAAGTATCAA 59.276 42.308 0.00 0.00 46.65 2.57
897 940 7.309744 CCAGGATCTCCTCTATCAAGTATCAAC 60.310 44.444 0.00 0.00 46.65 3.18
898 941 7.232330 CAGGATCTCCTCTATCAAGTATCAACA 59.768 40.741 0.00 0.00 46.65 3.33
899 942 7.955185 AGGATCTCCTCTATCAAGTATCAACAT 59.045 37.037 0.00 0.00 44.77 2.71
900 943 8.034215 GGATCTCCTCTATCAAGTATCAACATG 58.966 40.741 0.00 0.00 0.00 3.21
901 944 6.753180 TCTCCTCTATCAAGTATCAACATGC 58.247 40.000 0.00 0.00 0.00 4.06
902 945 6.324770 TCTCCTCTATCAAGTATCAACATGCA 59.675 38.462 0.00 0.00 0.00 3.96
903 946 7.015974 TCTCCTCTATCAAGTATCAACATGCAT 59.984 37.037 0.00 0.00 0.00 3.96
904 947 7.512130 TCCTCTATCAAGTATCAACATGCATT 58.488 34.615 0.00 0.00 0.00 3.56
905 948 7.443272 TCCTCTATCAAGTATCAACATGCATTG 59.557 37.037 0.00 0.00 0.00 2.82
906 949 6.962686 TCTATCAAGTATCAACATGCATTGC 58.037 36.000 0.00 0.46 0.00 3.56
907 950 5.585820 ATCAAGTATCAACATGCATTGCA 57.414 34.783 14.72 14.72 44.86 4.08
946 989 5.008415 CAGTATAAATCTTCCTTGCTGCCAG 59.992 44.000 0.00 0.00 0.00 4.85
957 1000 2.684843 GCTGCCAGCTCGACCAAAG 61.685 63.158 10.04 0.00 38.45 2.77
987 1030 0.107654 AATAGCACCACCTCGGAAGC 60.108 55.000 0.00 0.00 38.63 3.86
993 1036 1.207089 CACCACCTCGGAAGCTAATCA 59.793 52.381 0.00 0.00 38.63 2.57
996 1039 2.223923 CCACCTCGGAAGCTAATCAGAG 60.224 54.545 8.19 8.19 40.14 3.35
1479 1522 3.129502 CGGAGCTGGACGTACCGA 61.130 66.667 1.71 0.00 45.31 4.69
1544 1587 1.380403 ATGGTCGTCGAGAGCTGGAG 61.380 60.000 0.00 0.00 46.86 3.86
1826 1869 2.184322 CATAGCGCGGTGACCACT 59.816 61.111 23.02 2.86 0.00 4.00
1959 2010 1.825191 CAGTGGATCAATGCCCCCG 60.825 63.158 0.00 0.00 0.00 5.73
1996 2047 8.843885 AGCGTAGTTCTCTTTAAAACCTTATT 57.156 30.769 0.00 0.00 0.00 1.40
2019 2070 2.364970 TCGTGTTCCGGAGAAAAAGGTA 59.635 45.455 3.34 0.00 37.11 3.08
2020 2071 3.132925 CGTGTTCCGGAGAAAAAGGTAA 58.867 45.455 3.34 0.00 32.58 2.85
2112 2163 1.614241 CGAGGGTCCAATCTTCCCGT 61.614 60.000 0.00 0.00 45.27 5.28
2118 2169 2.890474 CAATCTTCCCGTCCGCCG 60.890 66.667 0.00 0.00 0.00 6.46
2159 2233 2.561733 TCTACGAGCAGACAAATCCG 57.438 50.000 0.00 0.00 0.00 4.18
2165 2239 2.700773 GCAGACAAATCCGGCACCC 61.701 63.158 0.00 0.00 0.00 4.61
2167 2241 0.251916 CAGACAAATCCGGCACCCTA 59.748 55.000 0.00 0.00 0.00 3.53
2170 2244 2.164338 GACAAATCCGGCACCCTAAAA 58.836 47.619 0.00 0.00 0.00 1.52
2176 2250 3.724732 TCCGGCACCCTAAAAGTTTAT 57.275 42.857 0.00 0.00 0.00 1.40
2177 2251 3.349022 TCCGGCACCCTAAAAGTTTATG 58.651 45.455 0.00 0.00 0.00 1.90
2179 2253 3.349022 CGGCACCCTAAAAGTTTATGGA 58.651 45.455 10.89 0.00 34.00 3.41
2180 2254 3.128068 CGGCACCCTAAAAGTTTATGGAC 59.872 47.826 10.89 4.24 34.00 4.02
2188 2271 1.435577 AAGTTTATGGACGTGACCGC 58.564 50.000 0.00 0.00 37.70 5.68
2189 2272 0.606604 AGTTTATGGACGTGACCGCT 59.393 50.000 0.00 0.00 37.70 5.52
2190 2273 1.820519 AGTTTATGGACGTGACCGCTA 59.179 47.619 0.00 0.00 37.70 4.26
2217 2300 5.517904 GCGTCAAACGGTCTCTTATATAGT 58.482 41.667 1.33 0.00 42.82 2.12
2219 2302 6.722301 CGTCAAACGGTCTCTTATATAGTCA 58.278 40.000 0.00 0.00 38.08 3.41
2224 2307 7.741027 AACGGTCTCTTATATAGTCAATCGA 57.259 36.000 0.00 0.00 0.00 3.59
2229 2312 9.439500 GGTCTCTTATATAGTCAATCGAGTAGT 57.561 37.037 0.00 0.00 30.53 2.73
2251 2334 6.775708 AGTAGCACACCTTAAATCTAAACCA 58.224 36.000 0.00 0.00 0.00 3.67
2253 2336 7.888546 AGTAGCACACCTTAAATCTAAACCATT 59.111 33.333 0.00 0.00 0.00 3.16
2283 2366 9.822185 TTCATGTATGTGGATCATATATAGCAC 57.178 33.333 0.00 0.00 38.28 4.40
2285 2368 9.603921 CATGTATGTGGATCATATATAGCACAA 57.396 33.333 0.00 0.00 38.28 3.33
2340 2423 9.516314 GCAATAAAGTAAAAGAAGTCACAGTTT 57.484 29.630 0.00 0.00 0.00 2.66
2356 2439 5.982516 TCACAGTTTAACAATTTGGACATGC 59.017 36.000 0.78 0.00 0.00 4.06
2374 2457 9.730705 TGGACATGCCAAAATGAAATTTAAATA 57.269 25.926 0.01 0.00 43.28 1.40
2385 2468 9.853555 AAATGAAATTTAAATATGAGCGTGACA 57.146 25.926 0.01 0.00 46.47 3.58
2386 2469 9.507280 AATGAAATTTAAATATGAGCGTGACAG 57.493 29.630 0.01 0.00 26.74 3.51
2387 2470 8.262715 TGAAATTTAAATATGAGCGTGACAGA 57.737 30.769 0.01 0.00 0.00 3.41
2388 2471 8.892723 TGAAATTTAAATATGAGCGTGACAGAT 58.107 29.630 0.01 0.00 0.00 2.90
2389 2472 9.374960 GAAATTTAAATATGAGCGTGACAGATC 57.625 33.333 0.01 0.00 0.00 2.75
2390 2473 8.437360 AATTTAAATATGAGCGTGACAGATCA 57.563 30.769 0.01 0.00 41.01 2.92
2398 2481 4.152248 TGACAGATCACCCCCTGG 57.848 61.111 0.00 0.00 34.85 4.45
2399 2482 1.473844 TGACAGATCACCCCCTGGA 59.526 57.895 0.00 0.00 34.85 3.86
2400 2483 0.909610 TGACAGATCACCCCCTGGAC 60.910 60.000 0.00 0.00 34.85 4.02
2401 2484 1.961180 GACAGATCACCCCCTGGACG 61.961 65.000 0.00 0.00 34.85 4.79
2402 2485 2.365635 AGATCACCCCCTGGACGG 60.366 66.667 0.00 0.00 34.81 4.79
2403 2486 2.365105 GATCACCCCCTGGACGGA 60.365 66.667 6.77 0.00 34.81 4.69
2404 2487 1.766461 GATCACCCCCTGGACGGAT 60.766 63.158 6.77 0.00 34.81 4.18
2405 2488 1.759459 GATCACCCCCTGGACGGATC 61.759 65.000 6.77 4.77 33.53 3.36
2406 2489 2.545550 ATCACCCCCTGGACGGATCA 62.546 60.000 6.77 0.00 34.81 2.92
2407 2490 2.687566 ACCCCCTGGACGGATCAC 60.688 66.667 6.77 0.00 34.81 3.06
2408 2491 2.365635 CCCCCTGGACGGATCACT 60.366 66.667 0.00 0.00 33.16 3.41
2409 2492 2.435693 CCCCCTGGACGGATCACTC 61.436 68.421 0.00 0.00 33.16 3.51
2410 2493 1.685765 CCCCTGGACGGATCACTCA 60.686 63.158 0.00 0.00 33.16 3.41
2411 2494 1.050988 CCCCTGGACGGATCACTCAT 61.051 60.000 0.00 0.00 33.16 2.90
2412 2495 0.390860 CCCTGGACGGATCACTCATC 59.609 60.000 0.00 0.00 33.16 2.92
2413 2496 1.114627 CCTGGACGGATCACTCATCA 58.885 55.000 0.00 0.00 32.33 3.07
2414 2497 1.068281 CCTGGACGGATCACTCATCAG 59.932 57.143 0.00 0.00 32.33 2.90
2415 2498 2.027385 CTGGACGGATCACTCATCAGA 58.973 52.381 0.00 0.00 32.33 3.27
2416 2499 1.751351 TGGACGGATCACTCATCAGAC 59.249 52.381 0.00 0.00 32.33 3.51
2417 2500 1.751351 GGACGGATCACTCATCAGACA 59.249 52.381 0.00 0.00 32.33 3.41
2418 2501 2.363680 GGACGGATCACTCATCAGACAT 59.636 50.000 0.00 0.00 32.33 3.06
2419 2502 3.551863 GGACGGATCACTCATCAGACATC 60.552 52.174 0.00 0.00 32.33 3.06
2420 2503 3.026694 ACGGATCACTCATCAGACATCA 58.973 45.455 0.00 0.00 32.33 3.07
2421 2504 3.640498 ACGGATCACTCATCAGACATCAT 59.360 43.478 0.00 0.00 32.33 2.45
2422 2505 4.236147 CGGATCACTCATCAGACATCATC 58.764 47.826 0.00 0.00 32.33 2.92
2423 2506 4.567971 GGATCACTCATCAGACATCATCC 58.432 47.826 0.00 0.00 32.33 3.51
2424 2507 4.040095 GGATCACTCATCAGACATCATCCA 59.960 45.833 0.00 0.00 32.33 3.41
2425 2508 5.280062 GGATCACTCATCAGACATCATCCAT 60.280 44.000 0.00 0.00 32.33 3.41
2426 2509 4.957296 TCACTCATCAGACATCATCCATG 58.043 43.478 0.00 0.00 38.64 3.66
2427 2510 4.652421 TCACTCATCAGACATCATCCATGA 59.348 41.667 0.00 0.00 41.70 3.07
2436 2519 1.901591 ATCATCCATGATGGCGAACC 58.098 50.000 6.59 0.00 45.27 3.62
2459 2542 5.373812 AACCTATGGTTGGATGGTTAGAG 57.626 43.478 0.71 0.00 45.07 2.43
2460 2543 3.716872 ACCTATGGTTGGATGGTTAGAGG 59.283 47.826 0.00 0.00 27.29 3.69
2461 2544 3.973973 CCTATGGTTGGATGGTTAGAGGA 59.026 47.826 0.00 0.00 0.00 3.71
2462 2545 4.412199 CCTATGGTTGGATGGTTAGAGGAA 59.588 45.833 0.00 0.00 0.00 3.36
2463 2546 5.073691 CCTATGGTTGGATGGTTAGAGGAAT 59.926 44.000 0.00 0.00 0.00 3.01
2464 2547 4.946160 TGGTTGGATGGTTAGAGGAATT 57.054 40.909 0.00 0.00 0.00 2.17
2465 2548 4.599041 TGGTTGGATGGTTAGAGGAATTG 58.401 43.478 0.00 0.00 0.00 2.32
2466 2549 4.044065 TGGTTGGATGGTTAGAGGAATTGT 59.956 41.667 0.00 0.00 0.00 2.71
2467 2550 4.399303 GGTTGGATGGTTAGAGGAATTGTG 59.601 45.833 0.00 0.00 0.00 3.33
2468 2551 4.235079 TGGATGGTTAGAGGAATTGTGG 57.765 45.455 0.00 0.00 0.00 4.17
2469 2552 3.591527 TGGATGGTTAGAGGAATTGTGGT 59.408 43.478 0.00 0.00 0.00 4.16
2470 2553 4.785914 TGGATGGTTAGAGGAATTGTGGTA 59.214 41.667 0.00 0.00 0.00 3.25
2471 2554 5.431731 TGGATGGTTAGAGGAATTGTGGTAT 59.568 40.000 0.00 0.00 0.00 2.73
2472 2555 5.998363 GGATGGTTAGAGGAATTGTGGTATC 59.002 44.000 0.00 0.00 0.00 2.24
2473 2556 5.367945 TGGTTAGAGGAATTGTGGTATCC 57.632 43.478 0.00 0.00 0.00 2.59
2474 2557 4.165372 TGGTTAGAGGAATTGTGGTATCCC 59.835 45.833 0.00 0.00 33.55 3.85
2475 2558 4.445879 GGTTAGAGGAATTGTGGTATCCCC 60.446 50.000 0.00 0.00 33.55 4.81
2476 2559 2.858644 AGAGGAATTGTGGTATCCCCA 58.141 47.619 0.00 0.00 42.51 4.96
2477 2560 2.780010 AGAGGAATTGTGGTATCCCCAG 59.220 50.000 0.00 0.00 46.45 4.45
2478 2561 1.215423 AGGAATTGTGGTATCCCCAGC 59.785 52.381 0.00 0.00 46.45 4.85
2479 2562 1.692411 GAATTGTGGTATCCCCAGCC 58.308 55.000 0.00 0.00 46.45 4.85
2480 2563 0.261696 AATTGTGGTATCCCCAGCCC 59.738 55.000 0.00 0.00 46.45 5.19
2481 2564 0.923729 ATTGTGGTATCCCCAGCCCA 60.924 55.000 0.00 0.00 46.45 5.36
2482 2565 0.923729 TTGTGGTATCCCCAGCCCAT 60.924 55.000 0.00 0.00 46.45 4.00
2483 2566 1.352622 TGTGGTATCCCCAGCCCATC 61.353 60.000 0.00 0.00 46.45 3.51
2484 2567 1.005423 TGGTATCCCCAGCCCATCA 59.995 57.895 0.00 0.00 38.72 3.07
2485 2568 1.061905 TGGTATCCCCAGCCCATCAG 61.062 60.000 0.00 0.00 38.72 2.90
2486 2569 1.763770 GTATCCCCAGCCCATCAGG 59.236 63.158 0.00 0.00 39.47 3.86
2499 2582 1.745087 CCATCAGGGTTCAAATCGTGG 59.255 52.381 0.00 0.00 0.00 4.94
2500 2583 2.436417 CATCAGGGTTCAAATCGTGGT 58.564 47.619 0.00 0.00 0.00 4.16
2501 2584 1.890876 TCAGGGTTCAAATCGTGGTG 58.109 50.000 0.00 0.00 0.00 4.17
2502 2585 0.240945 CAGGGTTCAAATCGTGGTGC 59.759 55.000 0.00 0.00 0.00 5.01
2503 2586 0.110486 AGGGTTCAAATCGTGGTGCT 59.890 50.000 0.00 0.00 0.00 4.40
2504 2587 0.521735 GGGTTCAAATCGTGGTGCTC 59.478 55.000 0.00 0.00 0.00 4.26
2505 2588 0.165944 GGTTCAAATCGTGGTGCTCG 59.834 55.000 0.00 0.00 0.00 5.03
2506 2589 0.452784 GTTCAAATCGTGGTGCTCGC 60.453 55.000 0.00 0.00 0.00 5.03
2507 2590 0.882484 TTCAAATCGTGGTGCTCGCA 60.882 50.000 0.00 0.00 0.00 5.10
2508 2591 0.673333 TCAAATCGTGGTGCTCGCAT 60.673 50.000 0.00 0.00 0.00 4.73
2509 2592 0.168788 CAAATCGTGGTGCTCGCATT 59.831 50.000 0.00 0.00 0.00 3.56
2510 2593 0.881118 AAATCGTGGTGCTCGCATTT 59.119 45.000 0.00 0.00 0.00 2.32
2511 2594 1.732941 AATCGTGGTGCTCGCATTTA 58.267 45.000 0.00 0.00 0.00 1.40
2512 2595 1.953559 ATCGTGGTGCTCGCATTTAT 58.046 45.000 0.00 0.00 0.00 1.40
2513 2596 1.732941 TCGTGGTGCTCGCATTTATT 58.267 45.000 0.00 0.00 0.00 1.40
2514 2597 1.663643 TCGTGGTGCTCGCATTTATTC 59.336 47.619 0.00 0.00 0.00 1.75
2515 2598 1.268032 CGTGGTGCTCGCATTTATTCC 60.268 52.381 0.00 0.00 0.00 3.01
2516 2599 2.017049 GTGGTGCTCGCATTTATTCCT 58.983 47.619 0.00 0.00 0.00 3.36
2517 2600 2.016318 TGGTGCTCGCATTTATTCCTG 58.984 47.619 0.00 0.00 0.00 3.86
2518 2601 1.334869 GGTGCTCGCATTTATTCCTGG 59.665 52.381 0.00 0.00 0.00 4.45
2519 2602 2.288666 GTGCTCGCATTTATTCCTGGA 58.711 47.619 0.00 0.00 0.00 3.86
2520 2603 2.880890 GTGCTCGCATTTATTCCTGGAT 59.119 45.455 0.00 0.00 0.00 3.41
2521 2604 3.316308 GTGCTCGCATTTATTCCTGGATT 59.684 43.478 0.00 0.00 0.00 3.01
2522 2605 3.953612 TGCTCGCATTTATTCCTGGATTT 59.046 39.130 0.00 0.00 0.00 2.17
2523 2606 5.008613 GTGCTCGCATTTATTCCTGGATTTA 59.991 40.000 0.00 0.00 0.00 1.40
2524 2607 5.769662 TGCTCGCATTTATTCCTGGATTTAT 59.230 36.000 0.00 0.00 0.00 1.40
2525 2608 6.265196 TGCTCGCATTTATTCCTGGATTTATT 59.735 34.615 0.00 0.00 0.00 1.40
2526 2609 7.147976 GCTCGCATTTATTCCTGGATTTATTT 58.852 34.615 0.00 0.00 0.00 1.40
2527 2610 7.327032 GCTCGCATTTATTCCTGGATTTATTTC 59.673 37.037 0.00 0.00 0.00 2.17
2528 2611 8.231692 TCGCATTTATTCCTGGATTTATTTCA 57.768 30.769 0.00 0.00 0.00 2.69
2529 2612 8.352201 TCGCATTTATTCCTGGATTTATTTCAG 58.648 33.333 0.00 0.00 0.00 3.02
2530 2613 7.596248 CGCATTTATTCCTGGATTTATTTCAGG 59.404 37.037 0.00 0.00 46.91 3.86
2538 2621 6.076981 CTGGATTTATTTCAGGATTTCCGG 57.923 41.667 0.00 0.00 42.08 5.14
2539 2622 4.340950 TGGATTTATTTCAGGATTTCCGGC 59.659 41.667 0.00 0.00 42.08 6.13
2540 2623 4.537015 GATTTATTTCAGGATTTCCGGCG 58.463 43.478 0.00 0.00 42.08 6.46
2541 2624 2.992124 TATTTCAGGATTTCCGGCGA 57.008 45.000 9.30 0.00 42.08 5.54
2542 2625 2.348411 ATTTCAGGATTTCCGGCGAT 57.652 45.000 9.30 0.00 42.08 4.58
2543 2626 1.378531 TTTCAGGATTTCCGGCGATG 58.621 50.000 9.30 0.00 42.08 3.84
2544 2627 1.095228 TTCAGGATTTCCGGCGATGC 61.095 55.000 9.30 0.00 42.08 3.91
2545 2628 2.588877 AGGATTTCCGGCGATGCG 60.589 61.111 9.30 0.00 42.08 4.73
2556 2639 2.711311 CGATGCGCATTCAGTGGG 59.289 61.111 26.12 4.47 43.21 4.61
2557 2640 1.815003 CGATGCGCATTCAGTGGGA 60.815 57.895 26.12 0.00 43.02 4.37
2558 2641 1.769098 CGATGCGCATTCAGTGGGAG 61.769 60.000 26.12 4.12 43.02 4.30
2559 2642 1.442526 GATGCGCATTCAGTGGGAGG 61.443 60.000 26.12 0.00 43.02 4.30
2560 2643 1.913951 ATGCGCATTCAGTGGGAGGA 61.914 55.000 19.28 0.00 43.02 3.71
2561 2644 1.817099 GCGCATTCAGTGGGAGGAG 60.817 63.158 0.30 0.00 43.02 3.69
2562 2645 1.900351 CGCATTCAGTGGGAGGAGA 59.100 57.895 0.00 0.00 43.02 3.71
2563 2646 0.460987 CGCATTCAGTGGGAGGAGAC 60.461 60.000 0.00 0.00 43.02 3.36
2564 2647 0.460987 GCATTCAGTGGGAGGAGACG 60.461 60.000 0.00 0.00 0.00 4.18
2565 2648 0.898320 CATTCAGTGGGAGGAGACGT 59.102 55.000 0.00 0.00 0.00 4.34
2566 2649 1.276421 CATTCAGTGGGAGGAGACGTT 59.724 52.381 0.00 0.00 0.00 3.99
2567 2650 0.966920 TTCAGTGGGAGGAGACGTTC 59.033 55.000 0.00 0.00 0.00 3.95
2588 2671 3.970721 TCGACGACGAGGTGCTTA 58.029 55.556 5.75 0.00 43.81 3.09
2589 2672 1.499056 TCGACGACGAGGTGCTTAC 59.501 57.895 5.75 0.00 43.81 2.34
2590 2673 1.862147 CGACGACGAGGTGCTTACG 60.862 63.158 0.00 0.00 42.66 3.18
2591 2674 1.513586 GACGACGAGGTGCTTACGG 60.514 63.158 0.00 0.00 0.00 4.02
2592 2675 2.192608 GACGACGAGGTGCTTACGGT 62.193 60.000 0.00 0.00 0.00 4.83
2593 2676 1.800315 CGACGAGGTGCTTACGGTG 60.800 63.158 0.00 0.00 0.00 4.94
2594 2677 1.582968 GACGAGGTGCTTACGGTGA 59.417 57.895 0.00 0.00 0.00 4.02
2595 2678 0.731855 GACGAGGTGCTTACGGTGAC 60.732 60.000 0.00 0.00 0.00 3.67
2596 2679 1.177256 ACGAGGTGCTTACGGTGACT 61.177 55.000 0.00 0.00 0.00 3.41
2597 2680 0.038526 CGAGGTGCTTACGGTGACTT 60.039 55.000 0.00 0.00 0.00 3.01
2598 2681 1.711206 GAGGTGCTTACGGTGACTTC 58.289 55.000 0.00 0.00 0.00 3.01
2599 2682 0.038526 AGGTGCTTACGGTGACTTCG 60.039 55.000 0.00 0.00 0.00 3.79
2600 2683 0.319297 GGTGCTTACGGTGACTTCGT 60.319 55.000 0.00 0.00 43.64 3.85
2601 2684 1.068333 GGTGCTTACGGTGACTTCGTA 60.068 52.381 0.00 0.00 41.38 3.43
2602 2685 2.607771 GGTGCTTACGGTGACTTCGTAA 60.608 50.000 6.65 6.65 46.48 3.18
2609 2692 6.841443 TTACGGTGACTTCGTAAATTTCAA 57.159 33.333 4.73 0.00 45.94 2.69
2610 2693 5.338614 ACGGTGACTTCGTAAATTTCAAG 57.661 39.130 0.00 0.00 39.22 3.02
2611 2694 5.051816 ACGGTGACTTCGTAAATTTCAAGA 58.948 37.500 0.00 0.00 39.22 3.02
2612 2695 5.699458 ACGGTGACTTCGTAAATTTCAAGAT 59.301 36.000 0.00 0.00 39.22 2.40
2613 2696 6.015504 CGGTGACTTCGTAAATTTCAAGATG 58.984 40.000 0.00 0.00 0.00 2.90
2614 2697 6.128661 CGGTGACTTCGTAAATTTCAAGATGA 60.129 38.462 0.00 0.00 0.00 2.92
2615 2698 7.413000 CGGTGACTTCGTAAATTTCAAGATGAT 60.413 37.037 0.00 0.00 0.00 2.45
2616 2699 8.879759 GGTGACTTCGTAAATTTCAAGATGATA 58.120 33.333 0.00 0.00 0.00 2.15
2619 2702 9.374960 GACTTCGTAAATTTCAAGATGATATGC 57.625 33.333 0.00 0.00 0.00 3.14
2620 2703 8.345565 ACTTCGTAAATTTCAAGATGATATGCC 58.654 33.333 0.00 0.00 0.00 4.40
2621 2704 6.887368 TCGTAAATTTCAAGATGATATGCCG 58.113 36.000 0.00 0.00 0.00 5.69
2622 2705 6.073276 TCGTAAATTTCAAGATGATATGCCGG 60.073 38.462 0.00 0.00 0.00 6.13
2623 2706 4.510038 AATTTCAAGATGATATGCCGGC 57.490 40.909 22.73 22.73 0.00 6.13
2624 2707 2.936919 TTCAAGATGATATGCCGGCT 57.063 45.000 29.70 15.76 0.00 5.52
2625 2708 2.462456 TCAAGATGATATGCCGGCTC 57.538 50.000 29.70 17.89 0.00 4.70
2626 2709 1.693606 TCAAGATGATATGCCGGCTCA 59.306 47.619 29.70 23.34 0.00 4.26
2627 2710 2.074576 CAAGATGATATGCCGGCTCAG 58.925 52.381 29.70 7.35 0.00 3.35
2628 2711 1.346062 AGATGATATGCCGGCTCAGT 58.654 50.000 29.70 13.44 0.00 3.41
2629 2712 1.274728 AGATGATATGCCGGCTCAGTC 59.725 52.381 29.70 19.55 0.00 3.51
2630 2713 1.274728 GATGATATGCCGGCTCAGTCT 59.725 52.381 29.70 8.26 0.00 3.24
2631 2714 1.123077 TGATATGCCGGCTCAGTCTT 58.877 50.000 29.70 5.10 0.00 3.01
2632 2715 1.486310 TGATATGCCGGCTCAGTCTTT 59.514 47.619 29.70 3.35 0.00 2.52
2633 2716 2.139118 GATATGCCGGCTCAGTCTTTC 58.861 52.381 29.70 9.22 0.00 2.62
2634 2717 0.179111 TATGCCGGCTCAGTCTTTCG 60.179 55.000 29.70 0.00 0.00 3.46
2635 2718 2.815647 GCCGGCTCAGTCTTTCGG 60.816 66.667 22.15 0.00 43.13 4.30
2636 2719 2.970639 CCGGCTCAGTCTTTCGGA 59.029 61.111 0.00 0.00 42.94 4.55
2637 2720 1.153745 CCGGCTCAGTCTTTCGGAG 60.154 63.158 0.00 0.00 42.94 4.63
2638 2721 1.153745 CGGCTCAGTCTTTCGGAGG 60.154 63.158 0.00 0.00 38.48 4.30
2639 2722 1.878656 CGGCTCAGTCTTTCGGAGGT 61.879 60.000 0.00 0.00 38.48 3.85
2640 2723 0.390472 GGCTCAGTCTTTCGGAGGTG 60.390 60.000 0.00 0.00 38.48 4.00
2641 2724 1.016653 GCTCAGTCTTTCGGAGGTGC 61.017 60.000 0.00 0.00 38.48 5.01
2642 2725 0.605589 CTCAGTCTTTCGGAGGTGCT 59.394 55.000 0.00 0.00 35.32 4.40
2643 2726 0.603569 TCAGTCTTTCGGAGGTGCTC 59.396 55.000 0.00 0.00 0.00 4.26
2644 2727 0.318441 CAGTCTTTCGGAGGTGCTCA 59.682 55.000 0.00 0.00 31.08 4.26
2645 2728 1.066573 CAGTCTTTCGGAGGTGCTCAT 60.067 52.381 0.00 0.00 31.08 2.90
2646 2729 2.166459 CAGTCTTTCGGAGGTGCTCATA 59.834 50.000 0.00 0.00 31.08 2.15
2647 2730 2.428890 AGTCTTTCGGAGGTGCTCATAG 59.571 50.000 0.00 0.00 31.08 2.23
2648 2731 1.757118 TCTTTCGGAGGTGCTCATAGG 59.243 52.381 0.00 0.00 31.08 2.57
2649 2732 0.830648 TTTCGGAGGTGCTCATAGGG 59.169 55.000 0.00 0.00 31.08 3.53
2650 2733 1.048724 TTCGGAGGTGCTCATAGGGG 61.049 60.000 0.00 0.00 31.08 4.79
2651 2734 1.762460 CGGAGGTGCTCATAGGGGT 60.762 63.158 0.00 0.00 31.08 4.95
2652 2735 0.469331 CGGAGGTGCTCATAGGGGTA 60.469 60.000 0.00 0.00 31.08 3.69
2653 2736 1.343069 GGAGGTGCTCATAGGGGTAG 58.657 60.000 0.00 0.00 31.08 3.18
2654 2737 1.343069 GAGGTGCTCATAGGGGTAGG 58.657 60.000 0.00 0.00 0.00 3.18
2655 2738 0.104934 AGGTGCTCATAGGGGTAGGG 60.105 60.000 0.00 0.00 0.00 3.53
2656 2739 0.400093 GGTGCTCATAGGGGTAGGGT 60.400 60.000 0.00 0.00 0.00 4.34
2657 2740 0.759346 GTGCTCATAGGGGTAGGGTG 59.241 60.000 0.00 0.00 0.00 4.61
2658 2741 0.341961 TGCTCATAGGGGTAGGGTGT 59.658 55.000 0.00 0.00 0.00 4.16
2659 2742 0.759346 GCTCATAGGGGTAGGGTGTG 59.241 60.000 0.00 0.00 0.00 3.82
2660 2743 1.970226 GCTCATAGGGGTAGGGTGTGT 60.970 57.143 0.00 0.00 0.00 3.72
2661 2744 1.762957 CTCATAGGGGTAGGGTGTGTG 59.237 57.143 0.00 0.00 0.00 3.82
2662 2745 1.079825 TCATAGGGGTAGGGTGTGTGT 59.920 52.381 0.00 0.00 0.00 3.72
2663 2746 1.209504 CATAGGGGTAGGGTGTGTGTG 59.790 57.143 0.00 0.00 0.00 3.82
2664 2747 0.191563 TAGGGGTAGGGTGTGTGTGT 59.808 55.000 0.00 0.00 0.00 3.72
2665 2748 1.072505 GGGGTAGGGTGTGTGTGTG 59.927 63.158 0.00 0.00 0.00 3.82
2666 2749 1.702022 GGGGTAGGGTGTGTGTGTGT 61.702 60.000 0.00 0.00 0.00 3.72
2667 2750 0.534203 GGGTAGGGTGTGTGTGTGTG 60.534 60.000 0.00 0.00 0.00 3.82
2668 2751 1.164041 GGTAGGGTGTGTGTGTGTGC 61.164 60.000 0.00 0.00 0.00 4.57
2669 2752 1.227409 TAGGGTGTGTGTGTGTGCG 60.227 57.895 0.00 0.00 0.00 5.34
2670 2753 1.962321 TAGGGTGTGTGTGTGTGCGT 61.962 55.000 0.00 0.00 0.00 5.24
2671 2754 2.403378 GGGTGTGTGTGTGTGCGTT 61.403 57.895 0.00 0.00 0.00 4.84
2672 2755 1.061887 GGTGTGTGTGTGTGCGTTC 59.938 57.895 0.00 0.00 0.00 3.95
2673 2756 1.640210 GGTGTGTGTGTGTGCGTTCA 61.640 55.000 0.00 0.00 0.00 3.18
2674 2757 0.376852 GTGTGTGTGTGTGCGTTCAT 59.623 50.000 0.00 0.00 0.00 2.57
2675 2758 1.595328 GTGTGTGTGTGTGCGTTCATA 59.405 47.619 0.00 0.00 0.00 2.15
2676 2759 1.864082 TGTGTGTGTGTGCGTTCATAG 59.136 47.619 0.00 0.00 0.00 2.23
2677 2760 1.194547 GTGTGTGTGTGCGTTCATAGG 59.805 52.381 0.00 0.00 0.00 2.57
2678 2761 0.796312 GTGTGTGTGCGTTCATAGGG 59.204 55.000 0.00 0.00 0.00 3.53
2679 2762 0.321210 TGTGTGTGCGTTCATAGGGG 60.321 55.000 0.00 0.00 0.00 4.79
2680 2763 0.321298 GTGTGTGCGTTCATAGGGGT 60.321 55.000 0.00 0.00 0.00 4.95
2681 2764 0.321210 TGTGTGCGTTCATAGGGGTG 60.321 55.000 0.00 0.00 0.00 4.61
2682 2765 0.036765 GTGTGCGTTCATAGGGGTGA 60.037 55.000 0.00 0.00 0.00 4.02
2683 2766 0.249120 TGTGCGTTCATAGGGGTGAG 59.751 55.000 0.00 0.00 0.00 3.51
2684 2767 0.249398 GTGCGTTCATAGGGGTGAGT 59.751 55.000 0.00 0.00 0.00 3.41
2685 2768 0.249120 TGCGTTCATAGGGGTGAGTG 59.751 55.000 0.00 0.00 0.00 3.51
2686 2769 0.249398 GCGTTCATAGGGGTGAGTGT 59.751 55.000 0.00 0.00 0.00 3.55
2687 2770 1.479323 GCGTTCATAGGGGTGAGTGTA 59.521 52.381 0.00 0.00 0.00 2.90
2688 2771 2.102588 GCGTTCATAGGGGTGAGTGTAT 59.897 50.000 0.00 0.00 0.00 2.29
2689 2772 3.717707 CGTTCATAGGGGTGAGTGTATG 58.282 50.000 0.00 0.00 0.00 2.39
2690 2773 3.467803 GTTCATAGGGGTGAGTGTATGC 58.532 50.000 0.00 0.00 0.00 3.14
2691 2774 1.686587 TCATAGGGGTGAGTGTATGCG 59.313 52.381 0.00 0.00 0.00 4.73
2692 2775 0.393077 ATAGGGGTGAGTGTATGCGC 59.607 55.000 0.00 0.00 0.00 6.09
2693 2776 2.011741 TAGGGGTGAGTGTATGCGCG 62.012 60.000 0.00 0.00 0.00 6.86
2694 2777 2.125673 GGGTGAGTGTATGCGCGT 60.126 61.111 8.43 7.55 0.00 6.01
2695 2778 2.452813 GGGTGAGTGTATGCGCGTG 61.453 63.158 13.61 0.00 0.00 5.34
2696 2779 1.736645 GGTGAGTGTATGCGCGTGT 60.737 57.895 13.61 0.00 0.00 4.49
2697 2780 0.457166 GGTGAGTGTATGCGCGTGTA 60.457 55.000 13.61 0.00 0.00 2.90
2698 2781 1.556564 GTGAGTGTATGCGCGTGTAT 58.443 50.000 13.61 4.63 0.00 2.29
2699 2782 2.542205 GGTGAGTGTATGCGCGTGTATA 60.542 50.000 13.61 2.40 0.00 1.47
2700 2783 3.305964 GTGAGTGTATGCGCGTGTATAT 58.694 45.455 13.61 0.00 0.00 0.86
2701 2784 3.119628 GTGAGTGTATGCGCGTGTATATG 59.880 47.826 13.61 0.00 0.00 1.78
2702 2785 3.003897 TGAGTGTATGCGCGTGTATATGA 59.996 43.478 13.61 0.00 0.00 2.15
2703 2786 3.565516 AGTGTATGCGCGTGTATATGAG 58.434 45.455 13.61 0.00 0.00 2.90
2704 2787 2.090658 GTGTATGCGCGTGTATATGAGC 59.909 50.000 13.61 0.41 38.85 4.26
2707 2790 4.228451 CGCGTGTATATGAGCGCT 57.772 55.556 11.27 11.27 46.56 5.92
2708 2791 2.506544 CGCGTGTATATGAGCGCTT 58.493 52.632 13.26 0.00 46.56 4.68
2709 2792 0.159554 CGCGTGTATATGAGCGCTTG 59.840 55.000 13.26 0.00 46.56 4.01
2710 2793 1.209128 GCGTGTATATGAGCGCTTGT 58.791 50.000 13.26 5.98 45.48 3.16
2711 2794 1.071239 GCGTGTATATGAGCGCTTGTG 60.071 52.381 13.26 0.00 45.48 3.33
2712 2795 2.193447 CGTGTATATGAGCGCTTGTGT 58.807 47.619 13.26 4.27 0.00 3.72
2713 2796 2.216488 CGTGTATATGAGCGCTTGTGTC 59.784 50.000 13.26 0.00 0.00 3.67
2714 2797 3.448686 GTGTATATGAGCGCTTGTGTCT 58.551 45.455 13.26 0.00 0.00 3.41
2715 2798 3.243877 GTGTATATGAGCGCTTGTGTCTG 59.756 47.826 13.26 0.00 0.00 3.51
2716 2799 2.680312 ATATGAGCGCTTGTGTCTGT 57.320 45.000 13.26 0.00 0.00 3.41
2717 2800 3.801114 ATATGAGCGCTTGTGTCTGTA 57.199 42.857 13.26 0.00 0.00 2.74
2718 2801 1.714794 ATGAGCGCTTGTGTCTGTAC 58.285 50.000 13.26 0.00 0.00 2.90
2719 2802 0.673985 TGAGCGCTTGTGTCTGTACT 59.326 50.000 13.26 0.00 0.00 2.73
2720 2803 1.063806 GAGCGCTTGTGTCTGTACTG 58.936 55.000 13.26 0.00 0.00 2.74
2721 2804 0.673985 AGCGCTTGTGTCTGTACTGA 59.326 50.000 2.64 0.00 0.00 3.41
2722 2805 1.273606 AGCGCTTGTGTCTGTACTGAT 59.726 47.619 2.64 0.00 0.00 2.90
2723 2806 1.391485 GCGCTTGTGTCTGTACTGATG 59.609 52.381 0.00 0.00 0.00 3.07
2724 2807 2.677199 CGCTTGTGTCTGTACTGATGT 58.323 47.619 5.69 0.00 0.00 3.06
2725 2808 3.059884 CGCTTGTGTCTGTACTGATGTT 58.940 45.455 5.69 0.00 0.00 2.71
2726 2809 3.121944 CGCTTGTGTCTGTACTGATGTTC 59.878 47.826 5.69 0.00 0.00 3.18
2727 2810 4.058124 GCTTGTGTCTGTACTGATGTTCA 58.942 43.478 5.69 0.00 0.00 3.18
2728 2811 4.511454 GCTTGTGTCTGTACTGATGTTCAA 59.489 41.667 5.69 8.15 0.00 2.69
2729 2812 5.007626 GCTTGTGTCTGTACTGATGTTCAAA 59.992 40.000 5.69 0.00 0.00 2.69
2730 2813 6.458206 GCTTGTGTCTGTACTGATGTTCAAAA 60.458 38.462 5.69 0.61 0.00 2.44
2731 2814 6.993786 TGTGTCTGTACTGATGTTCAAAAA 57.006 33.333 5.69 0.00 0.00 1.94
2757 2840 2.201921 ATCATCCATGATGCCTGCTC 57.798 50.000 1.04 0.00 45.27 4.26
2758 2841 0.109913 TCATCCATGATGCCTGCTCC 59.890 55.000 0.00 0.00 39.63 4.70
2759 2842 1.072678 ATCCATGATGCCTGCTCCG 59.927 57.895 0.00 0.00 0.00 4.63
2760 2843 3.285215 CCATGATGCCTGCTCCGC 61.285 66.667 0.00 0.00 0.00 5.54
2761 2844 3.285215 CATGATGCCTGCTCCGCC 61.285 66.667 0.00 0.00 0.00 6.13
2762 2845 3.800833 ATGATGCCTGCTCCGCCA 61.801 61.111 0.00 0.00 0.00 5.69
2763 2846 3.348554 ATGATGCCTGCTCCGCCAA 62.349 57.895 0.00 0.00 0.00 4.52
2764 2847 3.512516 GATGCCTGCTCCGCCAAC 61.513 66.667 0.00 0.00 0.00 3.77
2768 2851 2.825836 CCTGCTCCGCCAACCATC 60.826 66.667 0.00 0.00 0.00 3.51
2769 2852 2.825836 CTGCTCCGCCAACCATCC 60.826 66.667 0.00 0.00 0.00 3.51
2770 2853 3.329889 TGCTCCGCCAACCATCCT 61.330 61.111 0.00 0.00 0.00 3.24
2771 2854 2.044946 GCTCCGCCAACCATCCTT 60.045 61.111 0.00 0.00 0.00 3.36
2772 2855 2.409870 GCTCCGCCAACCATCCTTG 61.410 63.158 0.00 0.00 0.00 3.61
2773 2856 2.361104 TCCGCCAACCATCCTTGC 60.361 61.111 0.00 0.00 0.00 4.01
2774 2857 3.451894 CCGCCAACCATCCTTGCC 61.452 66.667 0.00 0.00 0.00 4.52
2775 2858 3.814268 CGCCAACCATCCTTGCCG 61.814 66.667 0.00 0.00 0.00 5.69
2776 2859 4.133796 GCCAACCATCCTTGCCGC 62.134 66.667 0.00 0.00 0.00 6.53
2777 2860 3.451894 CCAACCATCCTTGCCGCC 61.452 66.667 0.00 0.00 0.00 6.13
2778 2861 2.361610 CAACCATCCTTGCCGCCT 60.362 61.111 0.00 0.00 0.00 5.52
2779 2862 2.361610 AACCATCCTTGCCGCCTG 60.362 61.111 0.00 0.00 0.00 4.85
2781 2864 4.809496 CCATCCTTGCCGCCTGCT 62.809 66.667 0.00 0.00 42.00 4.24
2782 2865 3.207669 CATCCTTGCCGCCTGCTC 61.208 66.667 0.00 0.00 42.00 4.26
2783 2866 3.406200 ATCCTTGCCGCCTGCTCT 61.406 61.111 0.00 0.00 42.00 4.09
2784 2867 2.066393 ATCCTTGCCGCCTGCTCTA 61.066 57.895 0.00 0.00 42.00 2.43
2785 2868 2.317149 ATCCTTGCCGCCTGCTCTAC 62.317 60.000 0.00 0.00 42.00 2.59
2786 2869 2.512515 CTTGCCGCCTGCTCTACC 60.513 66.667 0.00 0.00 42.00 3.18
2787 2870 3.003173 TTGCCGCCTGCTCTACCT 61.003 61.111 0.00 0.00 42.00 3.08
2788 2871 2.914777 CTTGCCGCCTGCTCTACCTC 62.915 65.000 0.00 0.00 42.00 3.85
2789 2872 4.228567 GCCGCCTGCTCTACCTCC 62.229 72.222 0.00 0.00 36.87 4.30
2790 2873 2.759973 CCGCCTGCTCTACCTCCA 60.760 66.667 0.00 0.00 0.00 3.86
2791 2874 2.136878 CCGCCTGCTCTACCTCCAT 61.137 63.158 0.00 0.00 0.00 3.41
2792 2875 1.365633 CGCCTGCTCTACCTCCATC 59.634 63.158 0.00 0.00 0.00 3.51
2793 2876 1.751563 GCCTGCTCTACCTCCATCC 59.248 63.158 0.00 0.00 0.00 3.51
2794 2877 2.045280 CCTGCTCTACCTCCATCCG 58.955 63.158 0.00 0.00 0.00 4.18
2795 2878 0.757188 CCTGCTCTACCTCCATCCGT 60.757 60.000 0.00 0.00 0.00 4.69
2796 2879 1.115467 CTGCTCTACCTCCATCCGTT 58.885 55.000 0.00 0.00 0.00 4.44
2797 2880 1.067821 CTGCTCTACCTCCATCCGTTC 59.932 57.143 0.00 0.00 0.00 3.95
2798 2881 0.389757 GCTCTACCTCCATCCGTTCC 59.610 60.000 0.00 0.00 0.00 3.62
2799 2882 0.669077 CTCTACCTCCATCCGTTCCG 59.331 60.000 0.00 0.00 0.00 4.30
2800 2883 0.033796 TCTACCTCCATCCGTTCCGT 60.034 55.000 0.00 0.00 0.00 4.69
2801 2884 0.822164 CTACCTCCATCCGTTCCGTT 59.178 55.000 0.00 0.00 0.00 4.44
2802 2885 1.206371 CTACCTCCATCCGTTCCGTTT 59.794 52.381 0.00 0.00 0.00 3.60
2803 2886 0.399075 ACCTCCATCCGTTCCGTTTT 59.601 50.000 0.00 0.00 0.00 2.43
2804 2887 1.084289 CCTCCATCCGTTCCGTTTTC 58.916 55.000 0.00 0.00 0.00 2.29
2805 2888 0.719465 CTCCATCCGTTCCGTTTTCG 59.281 55.000 0.00 0.00 43.67 3.46
2806 2889 0.033781 TCCATCCGTTCCGTTTTCGT 59.966 50.000 0.00 0.00 42.35 3.85
2807 2890 0.869730 CCATCCGTTCCGTTTTCGTT 59.130 50.000 0.00 0.00 42.35 3.85
2808 2891 1.399215 CCATCCGTTCCGTTTTCGTTG 60.399 52.381 0.00 0.00 42.35 4.10
2809 2892 0.236449 ATCCGTTCCGTTTTCGTTGC 59.764 50.000 0.00 0.00 42.35 4.17
2810 2893 0.810823 TCCGTTCCGTTTTCGTTGCT 60.811 50.000 0.00 0.00 42.35 3.91
2811 2894 0.656205 CCGTTCCGTTTTCGTTGCTG 60.656 55.000 0.00 0.00 42.35 4.41
2812 2895 1.259544 CGTTCCGTTTTCGTTGCTGC 61.260 55.000 0.00 0.00 42.35 5.25
2813 2896 0.933047 GTTCCGTTTTCGTTGCTGCC 60.933 55.000 0.00 0.00 42.35 4.85
2814 2897 1.377366 TTCCGTTTTCGTTGCTGCCA 61.377 50.000 0.00 0.00 42.35 4.92
2815 2898 1.169661 TCCGTTTTCGTTGCTGCCAT 61.170 50.000 0.00 0.00 42.35 4.40
2816 2899 0.318614 CCGTTTTCGTTGCTGCCATT 60.319 50.000 0.00 0.00 42.35 3.16
2817 2900 1.486439 CGTTTTCGTTGCTGCCATTT 58.514 45.000 0.00 0.00 38.65 2.32
2818 2901 1.189884 CGTTTTCGTTGCTGCCATTTG 59.810 47.619 0.00 0.00 38.65 2.32
2819 2902 2.200899 GTTTTCGTTGCTGCCATTTGT 58.799 42.857 0.00 0.00 0.00 2.83
2820 2903 2.593346 TTTCGTTGCTGCCATTTGTT 57.407 40.000 0.00 0.00 0.00 2.83
2821 2904 2.132740 TTCGTTGCTGCCATTTGTTC 57.867 45.000 0.00 0.00 0.00 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
48 49 2.559668 AGTTGAAACATGCACCCATCAG 59.440 45.455 0.00 0.00 0.00 2.90
55 56 2.223782 TGCTCCAAGTTGAAACATGCAC 60.224 45.455 3.87 0.00 0.00 4.57
119 124 9.740239 GATAAAGAAGATGCTGAAATTATTGCA 57.260 29.630 0.00 0.00 39.83 4.08
230 236 1.132453 GGAATGTCCCTAAAAGCGTGC 59.868 52.381 0.00 0.00 0.00 5.34
242 248 3.118371 AGGAGAATACGGTTGGAATGTCC 60.118 47.826 0.00 0.00 36.96 4.02
253 259 6.210784 TCCCTGATTTACATAGGAGAATACGG 59.789 42.308 0.00 0.00 33.33 4.02
263 269 6.183360 ACGCACAAATTCCCTGATTTACATAG 60.183 38.462 0.00 0.00 0.00 2.23
274 280 0.537143 TGAGCACGCACAAATTCCCT 60.537 50.000 0.00 0.00 0.00 4.20
299 305 7.661847 CCCACATACTATTCTTCCCTTGATAAC 59.338 40.741 0.00 0.00 0.00 1.89
301 307 6.849697 ACCCACATACTATTCTTCCCTTGATA 59.150 38.462 0.00 0.00 0.00 2.15
304 310 5.126067 CACCCACATACTATTCTTCCCTTG 58.874 45.833 0.00 0.00 0.00 3.61
332 338 1.883275 CCCGGCACTCAATGTTAACAA 59.117 47.619 13.23 0.00 0.00 2.83
334 340 1.199097 CACCCGGCACTCAATGTTAAC 59.801 52.381 0.00 0.00 0.00 2.01
379 385 2.093447 CGGTTCTTCTCTTGCCCACTAT 60.093 50.000 0.00 0.00 0.00 2.12
381 387 0.035458 CGGTTCTTCTCTTGCCCACT 59.965 55.000 0.00 0.00 0.00 4.00
384 390 0.036306 TTCCGGTTCTTCTCTTGCCC 59.964 55.000 0.00 0.00 0.00 5.36
475 481 1.420532 AACTGGAGGGGCGGTTTGTA 61.421 55.000 0.00 0.00 0.00 2.41
509 520 2.601029 CGAGTAGAGTAGTGCATCTGCG 60.601 54.545 0.00 0.00 45.83 5.18
651 663 6.533723 GCCCCATTTTATTCCGAAGTTTTAAG 59.466 38.462 0.00 0.00 0.00 1.85
655 667 4.093743 AGCCCCATTTTATTCCGAAGTTT 58.906 39.130 0.00 0.00 0.00 2.66
661 673 2.289547 CACGTAGCCCCATTTTATTCCG 59.710 50.000 0.00 0.00 0.00 4.30
663 675 2.685897 TGCACGTAGCCCCATTTTATTC 59.314 45.455 7.38 0.00 44.83 1.75
671 683 0.463654 GATTGATGCACGTAGCCCCA 60.464 55.000 7.38 3.42 44.83 4.96
672 684 1.498865 CGATTGATGCACGTAGCCCC 61.499 60.000 7.38 1.26 44.83 5.80
673 685 0.529773 TCGATTGATGCACGTAGCCC 60.530 55.000 7.38 1.55 44.83 5.19
674 686 0.577269 GTCGATTGATGCACGTAGCC 59.423 55.000 7.38 0.00 44.83 3.93
675 687 0.227234 CGTCGATTGATGCACGTAGC 59.773 55.000 0.00 0.00 45.96 3.58
676 688 1.822581 TCGTCGATTGATGCACGTAG 58.177 50.000 0.00 0.00 33.89 3.51
677 689 2.159490 TCTTCGTCGATTGATGCACGTA 60.159 45.455 0.00 0.00 33.89 3.57
678 690 0.992072 CTTCGTCGATTGATGCACGT 59.008 50.000 0.00 0.00 33.89 4.49
679 691 1.268265 TCTTCGTCGATTGATGCACG 58.732 50.000 0.00 0.00 0.00 5.34
680 692 3.120683 TGTTTCTTCGTCGATTGATGCAC 60.121 43.478 0.00 0.00 0.00 4.57
681 693 3.063485 TGTTTCTTCGTCGATTGATGCA 58.937 40.909 0.00 0.00 0.00 3.96
682 694 3.722555 TGTTTCTTCGTCGATTGATGC 57.277 42.857 0.00 0.00 0.00 3.91
683 695 5.679906 ACTTTGTTTCTTCGTCGATTGATG 58.320 37.500 0.00 0.00 0.00 3.07
803 845 5.793030 AGGTTGTCGAGGAATAGAATAGG 57.207 43.478 0.00 0.00 0.00 2.57
841 883 7.927092 TGGTTGGCTTGGTTTTAACTTTTATAC 59.073 33.333 0.00 0.00 0.00 1.47
906 949 8.821147 ATTTATACTGGTGCAATGCAAATATG 57.179 30.769 10.44 1.47 41.47 1.78
907 950 8.863086 AGATTTATACTGGTGCAATGCAAATAT 58.137 29.630 10.44 8.10 41.47 1.28
908 951 8.236585 AGATTTATACTGGTGCAATGCAAATA 57.763 30.769 10.44 0.25 41.47 1.40
909 952 7.116075 AGATTTATACTGGTGCAATGCAAAT 57.884 32.000 10.44 3.09 41.47 2.32
910 953 6.528537 AGATTTATACTGGTGCAATGCAAA 57.471 33.333 10.44 0.00 41.47 3.68
911 954 6.405731 GGAAGATTTATACTGGTGCAATGCAA 60.406 38.462 10.44 0.00 41.47 4.08
920 963 4.884164 GCAGCAAGGAAGATTTATACTGGT 59.116 41.667 0.00 0.00 0.00 4.00
946 989 3.064820 TCTTTTGTGTTCTTTGGTCGAGC 59.935 43.478 7.89 7.89 0.00 5.03
957 1000 4.278419 AGGTGGTGCTATTCTTTTGTGTTC 59.722 41.667 0.00 0.00 0.00 3.18
987 1030 3.305676 CGTACCTCATGGCCTCTGATTAG 60.306 52.174 3.32 2.22 36.63 1.73
993 1036 3.956377 CCGTACCTCATGGCCTCT 58.044 61.111 3.32 0.00 36.63 3.69
1479 1522 0.397941 TGTAGCTCTTGCAGTGGCTT 59.602 50.000 13.03 1.28 42.74 4.35
1518 1561 0.738975 TCTCGACGACCATGTCCATC 59.261 55.000 0.00 0.00 35.40 3.51
1672 1715 3.145551 CCAGTACGACCCTCCCCG 61.146 72.222 0.00 0.00 0.00 5.73
1841 1884 3.213206 ACATGTTTCACTCCAAGAGCA 57.787 42.857 0.00 0.00 32.04 4.26
1851 1894 9.216117 AGGAGTAGTATTTACAACATGTTTCAC 57.784 33.333 8.77 1.08 0.00 3.18
1896 1946 4.735132 TGCAGCGCCACGTAGGTC 62.735 66.667 2.29 0.00 40.61 3.85
1954 2004 3.642778 CTACACTGACACGCGGGGG 62.643 68.421 15.46 0.00 0.00 5.40
1959 2010 0.109873 ACTACGCTACACTGACACGC 60.110 55.000 0.00 0.00 0.00 5.34
2118 2169 1.538419 GCTCTAACCATACACCGGAGC 60.538 57.143 9.46 0.00 38.00 4.70
2144 2213 1.741401 TGCCGGATTTGTCTGCTCG 60.741 57.895 5.05 0.00 0.00 5.03
2145 2214 1.648467 GGTGCCGGATTTGTCTGCTC 61.648 60.000 5.05 0.00 0.00 4.26
2149 2218 0.988832 TTAGGGTGCCGGATTTGTCT 59.011 50.000 5.05 0.00 0.00 3.41
2159 2233 3.128068 CGTCCATAAACTTTTAGGGTGCC 59.872 47.826 11.21 2.43 43.20 5.01
2165 2239 4.435121 GCGGTCACGTCCATAAACTTTTAG 60.435 45.833 0.00 0.00 43.45 1.85
2167 2241 2.224784 GCGGTCACGTCCATAAACTTTT 59.775 45.455 0.00 0.00 43.45 2.27
2170 2244 0.606604 AGCGGTCACGTCCATAAACT 59.393 50.000 0.00 0.00 43.45 2.66
2176 2250 1.287815 CTGTTAGCGGTCACGTCCA 59.712 57.895 0.00 0.00 43.45 4.02
2177 2251 2.092882 GCTGTTAGCGGTCACGTCC 61.093 63.158 0.00 0.00 43.45 4.79
2188 2271 1.719780 GAGACCGTTTGACGCTGTTAG 59.280 52.381 0.00 0.00 40.91 2.34
2189 2272 1.338973 AGAGACCGTTTGACGCTGTTA 59.661 47.619 0.00 0.00 40.91 2.41
2190 2273 0.104304 AGAGACCGTTTGACGCTGTT 59.896 50.000 0.00 0.00 40.91 3.16
2198 2281 8.074370 TCGATTGACTATATAAGAGACCGTTTG 58.926 37.037 0.00 0.00 0.00 2.93
2199 2282 8.162878 TCGATTGACTATATAAGAGACCGTTT 57.837 34.615 0.00 0.00 0.00 3.60
2200 2283 7.444792 ACTCGATTGACTATATAAGAGACCGTT 59.555 37.037 0.00 0.00 0.00 4.44
2201 2284 6.935771 ACTCGATTGACTATATAAGAGACCGT 59.064 38.462 0.00 0.00 0.00 4.83
2202 2285 7.367159 ACTCGATTGACTATATAAGAGACCG 57.633 40.000 0.00 0.00 0.00 4.79
2210 2293 8.933807 GTGTGCTACTACTCGATTGACTATATA 58.066 37.037 0.00 0.00 0.00 0.86
2215 2298 3.128938 GGTGTGCTACTACTCGATTGACT 59.871 47.826 0.00 0.00 0.00 3.41
2217 2300 3.353557 AGGTGTGCTACTACTCGATTGA 58.646 45.455 0.00 0.00 0.00 2.57
2219 2302 5.909621 TTAAGGTGTGCTACTACTCGATT 57.090 39.130 0.00 0.00 0.00 3.34
2224 2307 8.039538 GGTTTAGATTTAAGGTGTGCTACTACT 58.960 37.037 0.00 0.00 0.00 2.57
2229 2312 9.742144 TTAATGGTTTAGATTTAAGGTGTGCTA 57.258 29.630 0.00 0.00 0.00 3.49
2231 2314 9.869757 ATTTAATGGTTTAGATTTAAGGTGTGC 57.130 29.630 0.00 0.00 0.00 4.57
2258 2341 8.980596 TGTGCTATATATGATCCACATACATGA 58.019 33.333 0.00 0.00 43.12 3.07
2265 2348 9.743581 ATGAATTTGTGCTATATATGATCCACA 57.256 29.630 0.00 1.18 0.00 4.17
2278 2361 9.791820 CTGTTGAATTATGATGAATTTGTGCTA 57.208 29.630 0.00 0.00 0.00 3.49
2279 2362 8.308931 ACTGTTGAATTATGATGAATTTGTGCT 58.691 29.630 0.00 0.00 0.00 4.40
2280 2363 8.470040 ACTGTTGAATTATGATGAATTTGTGC 57.530 30.769 0.00 0.00 0.00 4.57
2313 2396 7.649057 ACTGTGACTTCTTTTACTTTATTGCC 58.351 34.615 0.00 0.00 0.00 4.52
2328 2411 7.254852 TGTCCAAATTGTTAAACTGTGACTTC 58.745 34.615 0.00 0.00 0.00 3.01
2331 2414 6.074356 GCATGTCCAAATTGTTAAACTGTGAC 60.074 38.462 0.00 0.00 0.00 3.67
2335 2418 5.295950 TGGCATGTCCAAATTGTTAAACTG 58.704 37.500 6.42 0.00 43.21 3.16
2356 2439 9.904647 CACGCTCATATTTAAATTTCATTTTGG 57.095 29.630 5.91 0.00 33.82 3.28
2381 2464 0.909610 GTCCAGGGGGTGATCTGTCA 60.910 60.000 0.00 0.00 34.93 3.58
2382 2465 1.908483 GTCCAGGGGGTGATCTGTC 59.092 63.158 0.00 0.00 34.93 3.51
2383 2466 1.990060 CGTCCAGGGGGTGATCTGT 60.990 63.158 0.00 0.00 34.93 3.41
2384 2467 2.735772 CCGTCCAGGGGGTGATCTG 61.736 68.421 0.00 0.00 35.97 2.90
2385 2468 2.257541 ATCCGTCCAGGGGGTGATCT 62.258 60.000 0.00 0.00 41.52 2.75
2386 2469 1.759459 GATCCGTCCAGGGGGTGATC 61.759 65.000 0.00 0.00 41.52 2.92
2387 2470 1.766461 GATCCGTCCAGGGGGTGAT 60.766 63.158 0.00 0.00 41.52 3.06
2388 2471 2.365105 GATCCGTCCAGGGGGTGA 60.365 66.667 0.00 0.00 41.52 4.02
2389 2472 2.687200 TGATCCGTCCAGGGGGTG 60.687 66.667 0.00 0.00 41.52 4.61
2390 2473 2.687566 GTGATCCGTCCAGGGGGT 60.688 66.667 0.00 0.00 41.52 4.95
2391 2474 2.365635 AGTGATCCGTCCAGGGGG 60.366 66.667 0.00 0.00 41.52 5.40
2392 2475 1.050988 ATGAGTGATCCGTCCAGGGG 61.051 60.000 0.00 0.00 41.52 4.79
2393 2476 0.390860 GATGAGTGATCCGTCCAGGG 59.609 60.000 0.00 0.00 41.52 4.45
2394 2477 1.068281 CTGATGAGTGATCCGTCCAGG 59.932 57.143 0.00 0.00 42.97 4.45
2395 2478 2.027385 TCTGATGAGTGATCCGTCCAG 58.973 52.381 0.00 0.00 0.00 3.86
2396 2479 1.751351 GTCTGATGAGTGATCCGTCCA 59.249 52.381 0.00 0.00 0.00 4.02
2397 2480 1.751351 TGTCTGATGAGTGATCCGTCC 59.249 52.381 0.00 0.00 0.00 4.79
2398 2481 3.067320 TGATGTCTGATGAGTGATCCGTC 59.933 47.826 0.00 0.00 0.00 4.79
2399 2482 3.026694 TGATGTCTGATGAGTGATCCGT 58.973 45.455 0.00 0.00 0.00 4.69
2400 2483 3.722728 TGATGTCTGATGAGTGATCCG 57.277 47.619 0.00 0.00 0.00 4.18
2401 2484 4.040095 TGGATGATGTCTGATGAGTGATCC 59.960 45.833 0.00 0.00 0.00 3.36
2402 2485 5.211174 TGGATGATGTCTGATGAGTGATC 57.789 43.478 0.00 0.00 0.00 2.92
2403 2486 5.307196 TCATGGATGATGTCTGATGAGTGAT 59.693 40.000 0.00 0.00 33.29 3.06
2404 2487 4.652421 TCATGGATGATGTCTGATGAGTGA 59.348 41.667 0.00 0.00 33.29 3.41
2405 2488 4.957296 TCATGGATGATGTCTGATGAGTG 58.043 43.478 0.00 0.00 33.29 3.51
2406 2489 5.827326 ATCATGGATGATGTCTGATGAGT 57.173 39.130 1.18 0.00 45.27 3.41
2418 2501 0.545646 TGGTTCGCCATCATGGATGA 59.454 50.000 8.30 0.64 43.56 2.92
2419 2502 3.099002 TGGTTCGCCATCATGGATG 57.901 52.632 8.30 0.00 43.56 3.51
2438 2521 3.716872 CCTCTAACCATCCAACCATAGGT 59.283 47.826 0.00 0.00 37.65 3.08
2439 2522 3.973973 TCCTCTAACCATCCAACCATAGG 59.026 47.826 0.00 0.00 0.00 2.57
2440 2523 5.630415 TTCCTCTAACCATCCAACCATAG 57.370 43.478 0.00 0.00 0.00 2.23
2441 2524 6.069088 ACAATTCCTCTAACCATCCAACCATA 60.069 38.462 0.00 0.00 0.00 2.74
2442 2525 5.203528 CAATTCCTCTAACCATCCAACCAT 58.796 41.667 0.00 0.00 0.00 3.55
2443 2526 4.044065 ACAATTCCTCTAACCATCCAACCA 59.956 41.667 0.00 0.00 0.00 3.67
2444 2527 4.399303 CACAATTCCTCTAACCATCCAACC 59.601 45.833 0.00 0.00 0.00 3.77
2445 2528 4.399303 CCACAATTCCTCTAACCATCCAAC 59.601 45.833 0.00 0.00 0.00 3.77
2446 2529 4.044065 ACCACAATTCCTCTAACCATCCAA 59.956 41.667 0.00 0.00 0.00 3.53
2447 2530 3.591527 ACCACAATTCCTCTAACCATCCA 59.408 43.478 0.00 0.00 0.00 3.41
2448 2531 4.236527 ACCACAATTCCTCTAACCATCC 57.763 45.455 0.00 0.00 0.00 3.51
2449 2532 5.998363 GGATACCACAATTCCTCTAACCATC 59.002 44.000 0.00 0.00 0.00 3.51
2450 2533 5.941788 GGATACCACAATTCCTCTAACCAT 58.058 41.667 0.00 0.00 0.00 3.55
2451 2534 5.367945 GGATACCACAATTCCTCTAACCA 57.632 43.478 0.00 0.00 0.00 3.67
2468 2551 1.763770 CCTGATGGGCTGGGGATAC 59.236 63.158 0.00 0.00 32.31 2.24
2469 2552 4.337474 CCTGATGGGCTGGGGATA 57.663 61.111 0.00 0.00 32.31 2.59
2479 2562 1.745087 CCACGATTTGAACCCTGATGG 59.255 52.381 0.00 0.00 41.37 3.51
2480 2563 2.162208 CACCACGATTTGAACCCTGATG 59.838 50.000 0.00 0.00 0.00 3.07
2481 2564 2.436417 CACCACGATTTGAACCCTGAT 58.564 47.619 0.00 0.00 0.00 2.90
2482 2565 1.890876 CACCACGATTTGAACCCTGA 58.109 50.000 0.00 0.00 0.00 3.86
2483 2566 0.240945 GCACCACGATTTGAACCCTG 59.759 55.000 0.00 0.00 0.00 4.45
2484 2567 0.110486 AGCACCACGATTTGAACCCT 59.890 50.000 0.00 0.00 0.00 4.34
2485 2568 0.521735 GAGCACCACGATTTGAACCC 59.478 55.000 0.00 0.00 0.00 4.11
2486 2569 0.165944 CGAGCACCACGATTTGAACC 59.834 55.000 0.00 0.00 0.00 3.62
2487 2570 0.452784 GCGAGCACCACGATTTGAAC 60.453 55.000 0.00 0.00 0.00 3.18
2488 2571 0.882484 TGCGAGCACCACGATTTGAA 60.882 50.000 0.00 0.00 0.00 2.69
2489 2572 0.673333 ATGCGAGCACCACGATTTGA 60.673 50.000 0.00 0.00 0.00 2.69
2490 2573 0.168788 AATGCGAGCACCACGATTTG 59.831 50.000 0.00 0.00 0.00 2.32
2491 2574 0.881118 AAATGCGAGCACCACGATTT 59.119 45.000 0.00 0.00 0.00 2.17
2492 2575 1.732941 TAAATGCGAGCACCACGATT 58.267 45.000 0.00 0.00 0.00 3.34
2493 2576 1.953559 ATAAATGCGAGCACCACGAT 58.046 45.000 0.00 0.00 0.00 3.73
2494 2577 1.663643 GAATAAATGCGAGCACCACGA 59.336 47.619 0.00 0.00 0.00 4.35
2495 2578 1.268032 GGAATAAATGCGAGCACCACG 60.268 52.381 0.00 0.00 0.00 4.94
2496 2579 2.017049 AGGAATAAATGCGAGCACCAC 58.983 47.619 0.00 0.00 0.00 4.16
2497 2580 2.016318 CAGGAATAAATGCGAGCACCA 58.984 47.619 0.00 0.00 0.00 4.17
2498 2581 1.334869 CCAGGAATAAATGCGAGCACC 59.665 52.381 0.00 0.00 0.00 5.01
2499 2582 2.288666 TCCAGGAATAAATGCGAGCAC 58.711 47.619 0.00 0.00 0.00 4.40
2500 2583 2.708216 TCCAGGAATAAATGCGAGCA 57.292 45.000 0.00 0.00 0.00 4.26
2501 2584 4.574599 AAATCCAGGAATAAATGCGAGC 57.425 40.909 0.00 0.00 0.00 5.03
2502 2585 8.352201 TGAAATAAATCCAGGAATAAATGCGAG 58.648 33.333 0.00 0.00 0.00 5.03
2503 2586 8.231692 TGAAATAAATCCAGGAATAAATGCGA 57.768 30.769 0.00 0.00 0.00 5.10
2504 2587 8.511465 CTGAAATAAATCCAGGAATAAATGCG 57.489 34.615 0.00 0.00 0.00 4.73
2514 2597 5.010012 CCGGAAATCCTGAAATAAATCCAGG 59.990 44.000 0.00 0.00 46.64 4.45
2515 2598 5.507985 GCCGGAAATCCTGAAATAAATCCAG 60.508 44.000 5.05 0.00 0.00 3.86
2516 2599 4.340950 GCCGGAAATCCTGAAATAAATCCA 59.659 41.667 5.05 0.00 0.00 3.41
2517 2600 4.556699 CGCCGGAAATCCTGAAATAAATCC 60.557 45.833 5.05 0.00 0.00 3.01
2518 2601 4.274950 TCGCCGGAAATCCTGAAATAAATC 59.725 41.667 5.05 0.00 0.00 2.17
2519 2602 4.204012 TCGCCGGAAATCCTGAAATAAAT 58.796 39.130 5.05 0.00 0.00 1.40
2520 2603 3.611970 TCGCCGGAAATCCTGAAATAAA 58.388 40.909 5.05 0.00 0.00 1.40
2521 2604 3.269538 TCGCCGGAAATCCTGAAATAA 57.730 42.857 5.05 0.00 0.00 1.40
2522 2605 2.992124 TCGCCGGAAATCCTGAAATA 57.008 45.000 5.05 0.00 0.00 1.40
2523 2606 1.949525 CATCGCCGGAAATCCTGAAAT 59.050 47.619 5.05 0.00 0.00 2.17
2524 2607 1.378531 CATCGCCGGAAATCCTGAAA 58.621 50.000 5.05 0.00 0.00 2.69
2525 2608 1.095228 GCATCGCCGGAAATCCTGAA 61.095 55.000 5.05 0.00 0.00 3.02
2526 2609 1.523711 GCATCGCCGGAAATCCTGA 60.524 57.895 5.05 0.00 0.00 3.86
2527 2610 2.885676 CGCATCGCCGGAAATCCTG 61.886 63.158 5.05 0.00 0.00 3.86
2528 2611 2.588877 CGCATCGCCGGAAATCCT 60.589 61.111 5.05 0.00 0.00 3.24
2539 2622 1.769098 CTCCCACTGAATGCGCATCG 61.769 60.000 25.53 17.09 0.00 3.84
2540 2623 1.442526 CCTCCCACTGAATGCGCATC 61.443 60.000 25.53 17.12 0.00 3.91
2541 2624 1.452651 CCTCCCACTGAATGCGCAT 60.453 57.895 19.28 19.28 0.00 4.73
2542 2625 2.046023 CCTCCCACTGAATGCGCA 60.046 61.111 14.96 14.96 0.00 6.09
2543 2626 1.817099 CTCCTCCCACTGAATGCGC 60.817 63.158 0.00 0.00 0.00 6.09
2544 2627 0.460987 GTCTCCTCCCACTGAATGCG 60.461 60.000 0.00 0.00 0.00 4.73
2545 2628 0.460987 CGTCTCCTCCCACTGAATGC 60.461 60.000 0.00 0.00 0.00 3.56
2546 2629 0.898320 ACGTCTCCTCCCACTGAATG 59.102 55.000 0.00 0.00 0.00 2.67
2547 2630 1.550976 GAACGTCTCCTCCCACTGAAT 59.449 52.381 0.00 0.00 0.00 2.57
2548 2631 0.966920 GAACGTCTCCTCCCACTGAA 59.033 55.000 0.00 0.00 0.00 3.02
2549 2632 0.898789 GGAACGTCTCCTCCCACTGA 60.899 60.000 8.87 0.00 41.61 3.41
2550 2633 1.592223 GGAACGTCTCCTCCCACTG 59.408 63.158 8.87 0.00 41.61 3.66
2551 2634 4.115270 GGAACGTCTCCTCCCACT 57.885 61.111 8.87 0.00 41.61 4.00
2570 2653 0.792356 GTAAGCACCTCGTCGTCGAC 60.792 60.000 15.51 15.51 41.35 4.20
2571 2654 1.499056 GTAAGCACCTCGTCGTCGA 59.501 57.895 4.42 4.42 44.12 4.20
2572 2655 1.862147 CGTAAGCACCTCGTCGTCG 60.862 63.158 0.00 0.00 38.55 5.12
2573 2656 1.513586 CCGTAAGCACCTCGTCGTC 60.514 63.158 0.00 0.00 0.00 4.20
2574 2657 2.263741 ACCGTAAGCACCTCGTCGT 61.264 57.895 0.00 0.00 0.00 4.34
2575 2658 1.800315 CACCGTAAGCACCTCGTCG 60.800 63.158 0.00 0.00 0.00 5.12
2576 2659 0.731855 GTCACCGTAAGCACCTCGTC 60.732 60.000 0.00 0.00 0.00 4.20
2577 2660 1.177256 AGTCACCGTAAGCACCTCGT 61.177 55.000 0.00 0.00 0.00 4.18
2578 2661 0.038526 AAGTCACCGTAAGCACCTCG 60.039 55.000 0.00 0.00 0.00 4.63
2579 2662 1.711206 GAAGTCACCGTAAGCACCTC 58.289 55.000 0.00 0.00 0.00 3.85
2580 2663 0.038526 CGAAGTCACCGTAAGCACCT 60.039 55.000 0.00 0.00 0.00 4.00
2581 2664 0.319297 ACGAAGTCACCGTAAGCACC 60.319 55.000 0.00 0.00 29.74 5.01
2582 2665 2.336554 TACGAAGTCACCGTAAGCAC 57.663 50.000 0.00 0.00 43.93 4.40
2586 2669 6.700960 TCTTGAAATTTACGAAGTCACCGTAA 59.299 34.615 0.00 0.00 46.58 3.18
2587 2670 6.215121 TCTTGAAATTTACGAAGTCACCGTA 58.785 36.000 0.00 0.00 43.93 4.02
2588 2671 5.051816 TCTTGAAATTTACGAAGTCACCGT 58.948 37.500 0.00 0.00 43.93 4.83
2589 2672 5.585500 TCTTGAAATTTACGAAGTCACCG 57.415 39.130 0.00 0.00 43.93 4.94
2590 2673 7.129109 TCATCTTGAAATTTACGAAGTCACC 57.871 36.000 0.00 0.00 43.93 4.02
2593 2676 9.374960 GCATATCATCTTGAAATTTACGAAGTC 57.625 33.333 0.00 0.00 43.93 3.01
2595 2678 7.531871 CGGCATATCATCTTGAAATTTACGAAG 59.468 37.037 0.00 0.00 0.00 3.79
2596 2679 7.351981 CGGCATATCATCTTGAAATTTACGAA 58.648 34.615 0.00 0.00 0.00 3.85
2597 2680 6.073276 CCGGCATATCATCTTGAAATTTACGA 60.073 38.462 0.00 0.00 0.00 3.43
2598 2681 6.079763 CCGGCATATCATCTTGAAATTTACG 58.920 40.000 0.00 0.00 0.00 3.18
2599 2682 5.858581 GCCGGCATATCATCTTGAAATTTAC 59.141 40.000 24.80 0.00 0.00 2.01
2600 2683 5.769662 AGCCGGCATATCATCTTGAAATTTA 59.230 36.000 31.54 0.00 0.00 1.40
2601 2684 4.586001 AGCCGGCATATCATCTTGAAATTT 59.414 37.500 31.54 0.00 0.00 1.82
2602 2685 4.147321 AGCCGGCATATCATCTTGAAATT 58.853 39.130 31.54 0.00 0.00 1.82
2603 2686 3.755378 GAGCCGGCATATCATCTTGAAAT 59.245 43.478 31.54 0.06 0.00 2.17
2604 2687 3.141398 GAGCCGGCATATCATCTTGAAA 58.859 45.455 31.54 0.00 0.00 2.69
2605 2688 2.104622 TGAGCCGGCATATCATCTTGAA 59.895 45.455 31.54 0.00 0.00 2.69
2606 2689 1.693606 TGAGCCGGCATATCATCTTGA 59.306 47.619 31.54 0.00 0.00 3.02
2607 2690 2.074576 CTGAGCCGGCATATCATCTTG 58.925 52.381 31.54 7.95 0.00 3.02
2608 2691 1.696336 ACTGAGCCGGCATATCATCTT 59.304 47.619 31.54 3.33 0.00 2.40
2609 2692 1.274728 GACTGAGCCGGCATATCATCT 59.725 52.381 31.54 11.40 0.00 2.90
2610 2693 1.274728 AGACTGAGCCGGCATATCATC 59.725 52.381 31.54 19.98 0.00 2.92
2611 2694 1.346062 AGACTGAGCCGGCATATCAT 58.654 50.000 31.54 13.17 0.00 2.45
2612 2695 1.123077 AAGACTGAGCCGGCATATCA 58.877 50.000 31.54 22.44 0.00 2.15
2613 2696 2.139118 GAAAGACTGAGCCGGCATATC 58.861 52.381 31.54 18.63 0.00 1.63
2614 2697 1.539065 CGAAAGACTGAGCCGGCATAT 60.539 52.381 31.54 8.11 0.00 1.78
2615 2698 0.179111 CGAAAGACTGAGCCGGCATA 60.179 55.000 31.54 16.21 0.00 3.14
2616 2699 1.448540 CGAAAGACTGAGCCGGCAT 60.449 57.895 31.54 14.28 0.00 4.40
2617 2700 2.048222 CGAAAGACTGAGCCGGCA 60.048 61.111 31.54 7.98 0.00 5.69
2618 2701 2.815647 CCGAAAGACTGAGCCGGC 60.816 66.667 21.89 21.89 33.47 6.13
2619 2702 1.153745 CTCCGAAAGACTGAGCCGG 60.154 63.158 0.00 0.00 41.36 6.13
2620 2703 1.153745 CCTCCGAAAGACTGAGCCG 60.154 63.158 0.00 0.00 0.00 5.52
2621 2704 0.390472 CACCTCCGAAAGACTGAGCC 60.390 60.000 0.00 0.00 0.00 4.70
2622 2705 1.016653 GCACCTCCGAAAGACTGAGC 61.017 60.000 0.00 0.00 0.00 4.26
2623 2706 0.605589 AGCACCTCCGAAAGACTGAG 59.394 55.000 0.00 0.00 0.00 3.35
2624 2707 0.603569 GAGCACCTCCGAAAGACTGA 59.396 55.000 0.00 0.00 0.00 3.41
2625 2708 0.318441 TGAGCACCTCCGAAAGACTG 59.682 55.000 0.00 0.00 0.00 3.51
2626 2709 1.270907 ATGAGCACCTCCGAAAGACT 58.729 50.000 0.00 0.00 0.00 3.24
2627 2710 2.482142 CCTATGAGCACCTCCGAAAGAC 60.482 54.545 0.00 0.00 0.00 3.01
2628 2711 1.757118 CCTATGAGCACCTCCGAAAGA 59.243 52.381 0.00 0.00 0.00 2.52
2629 2712 1.202580 CCCTATGAGCACCTCCGAAAG 60.203 57.143 0.00 0.00 0.00 2.62
2630 2713 0.830648 CCCTATGAGCACCTCCGAAA 59.169 55.000 0.00 0.00 0.00 3.46
2631 2714 1.048724 CCCCTATGAGCACCTCCGAA 61.049 60.000 0.00 0.00 0.00 4.30
2632 2715 1.457643 CCCCTATGAGCACCTCCGA 60.458 63.158 0.00 0.00 0.00 4.55
2633 2716 0.469331 TACCCCTATGAGCACCTCCG 60.469 60.000 0.00 0.00 0.00 4.63
2634 2717 1.343069 CTACCCCTATGAGCACCTCC 58.657 60.000 0.00 0.00 0.00 4.30
2635 2718 1.343069 CCTACCCCTATGAGCACCTC 58.657 60.000 0.00 0.00 0.00 3.85
2636 2719 0.104934 CCCTACCCCTATGAGCACCT 60.105 60.000 0.00 0.00 0.00 4.00
2637 2720 0.400093 ACCCTACCCCTATGAGCACC 60.400 60.000 0.00 0.00 0.00 5.01
2638 2721 0.759346 CACCCTACCCCTATGAGCAC 59.241 60.000 0.00 0.00 0.00 4.40
2639 2722 0.341961 ACACCCTACCCCTATGAGCA 59.658 55.000 0.00 0.00 0.00 4.26
2640 2723 0.759346 CACACCCTACCCCTATGAGC 59.241 60.000 0.00 0.00 0.00 4.26
2641 2724 1.762957 CACACACCCTACCCCTATGAG 59.237 57.143 0.00 0.00 0.00 2.90
2642 2725 1.079825 ACACACACCCTACCCCTATGA 59.920 52.381 0.00 0.00 0.00 2.15
2643 2726 1.209504 CACACACACCCTACCCCTATG 59.790 57.143 0.00 0.00 0.00 2.23
2644 2727 1.203389 ACACACACACCCTACCCCTAT 60.203 52.381 0.00 0.00 0.00 2.57
2645 2728 0.191563 ACACACACACCCTACCCCTA 59.808 55.000 0.00 0.00 0.00 3.53
2646 2729 1.074014 ACACACACACCCTACCCCT 60.074 57.895 0.00 0.00 0.00 4.79
2647 2730 1.072505 CACACACACACCCTACCCC 59.927 63.158 0.00 0.00 0.00 4.95
2648 2731 0.534203 CACACACACACACCCTACCC 60.534 60.000 0.00 0.00 0.00 3.69
2649 2732 1.164041 GCACACACACACACCCTACC 61.164 60.000 0.00 0.00 0.00 3.18
2650 2733 1.495584 CGCACACACACACACCCTAC 61.496 60.000 0.00 0.00 0.00 3.18
2651 2734 1.227409 CGCACACACACACACCCTA 60.227 57.895 0.00 0.00 0.00 3.53
2652 2735 2.513666 CGCACACACACACACCCT 60.514 61.111 0.00 0.00 0.00 4.34
2653 2736 2.317685 GAACGCACACACACACACCC 62.318 60.000 0.00 0.00 0.00 4.61
2654 2737 1.061887 GAACGCACACACACACACC 59.938 57.895 0.00 0.00 0.00 4.16
2655 2738 0.376852 ATGAACGCACACACACACAC 59.623 50.000 0.00 0.00 0.00 3.82
2656 2739 1.864082 CTATGAACGCACACACACACA 59.136 47.619 0.00 0.00 0.00 3.72
2657 2740 1.194547 CCTATGAACGCACACACACAC 59.805 52.381 0.00 0.00 0.00 3.82
2658 2741 1.507562 CCTATGAACGCACACACACA 58.492 50.000 0.00 0.00 0.00 3.72
2659 2742 0.796312 CCCTATGAACGCACACACAC 59.204 55.000 0.00 0.00 0.00 3.82
2660 2743 0.321210 CCCCTATGAACGCACACACA 60.321 55.000 0.00 0.00 0.00 3.72
2661 2744 0.321298 ACCCCTATGAACGCACACAC 60.321 55.000 0.00 0.00 0.00 3.82
2662 2745 0.321210 CACCCCTATGAACGCACACA 60.321 55.000 0.00 0.00 0.00 3.72
2663 2746 0.036765 TCACCCCTATGAACGCACAC 60.037 55.000 0.00 0.00 0.00 3.82
2664 2747 0.249120 CTCACCCCTATGAACGCACA 59.751 55.000 0.00 0.00 0.00 4.57
2665 2748 0.249398 ACTCACCCCTATGAACGCAC 59.751 55.000 0.00 0.00 0.00 5.34
2666 2749 0.249120 CACTCACCCCTATGAACGCA 59.751 55.000 0.00 0.00 0.00 5.24
2667 2750 0.249398 ACACTCACCCCTATGAACGC 59.751 55.000 0.00 0.00 0.00 4.84
2668 2751 3.717707 CATACACTCACCCCTATGAACG 58.282 50.000 0.00 0.00 0.00 3.95
2669 2752 3.467803 GCATACACTCACCCCTATGAAC 58.532 50.000 0.00 0.00 0.00 3.18
2670 2753 2.102420 CGCATACACTCACCCCTATGAA 59.898 50.000 0.00 0.00 0.00 2.57
2671 2754 1.686587 CGCATACACTCACCCCTATGA 59.313 52.381 0.00 0.00 0.00 2.15
2672 2755 1.873903 GCGCATACACTCACCCCTATG 60.874 57.143 0.30 0.00 0.00 2.23
2673 2756 0.393077 GCGCATACACTCACCCCTAT 59.607 55.000 0.30 0.00 0.00 2.57
2674 2757 1.820581 GCGCATACACTCACCCCTA 59.179 57.895 0.30 0.00 0.00 3.53
2675 2758 2.584608 GCGCATACACTCACCCCT 59.415 61.111 0.30 0.00 0.00 4.79
2676 2759 2.890474 CGCGCATACACTCACCCC 60.890 66.667 8.75 0.00 0.00 4.95
2677 2760 2.125673 ACGCGCATACACTCACCC 60.126 61.111 5.73 0.00 0.00 4.61
2678 2761 0.457166 TACACGCGCATACACTCACC 60.457 55.000 5.73 0.00 0.00 4.02
2679 2762 1.556564 ATACACGCGCATACACTCAC 58.443 50.000 5.73 0.00 0.00 3.51
2680 2763 3.003897 TCATATACACGCGCATACACTCA 59.996 43.478 5.73 0.00 0.00 3.41
2681 2764 3.561503 TCATATACACGCGCATACACTC 58.438 45.455 5.73 0.00 0.00 3.51
2682 2765 3.565516 CTCATATACACGCGCATACACT 58.434 45.455 5.73 0.00 0.00 3.55
2683 2766 2.090658 GCTCATATACACGCGCATACAC 59.909 50.000 5.73 0.00 0.00 2.90
2684 2767 2.324860 GCTCATATACACGCGCATACA 58.675 47.619 5.73 0.00 0.00 2.29
2685 2768 1.317611 CGCTCATATACACGCGCATAC 59.682 52.381 5.73 0.00 39.11 2.39
2686 2769 1.613270 CGCTCATATACACGCGCATA 58.387 50.000 5.73 1.53 39.11 3.14
2687 2770 2.434688 CGCTCATATACACGCGCAT 58.565 52.632 5.73 0.00 39.11 4.73
2688 2771 3.916439 CGCTCATATACACGCGCA 58.084 55.556 5.73 0.00 39.11 6.09
2692 2775 2.193447 ACACAAGCGCTCATATACACG 58.807 47.619 12.06 0.00 0.00 4.49
2693 2776 3.243877 CAGACACAAGCGCTCATATACAC 59.756 47.826 12.06 0.00 0.00 2.90
2694 2777 3.119137 ACAGACACAAGCGCTCATATACA 60.119 43.478 12.06 0.00 0.00 2.29
2695 2778 3.448686 ACAGACACAAGCGCTCATATAC 58.551 45.455 12.06 1.00 0.00 1.47
2696 2779 3.801114 ACAGACACAAGCGCTCATATA 57.199 42.857 12.06 0.00 0.00 0.86
2697 2780 2.680312 ACAGACACAAGCGCTCATAT 57.320 45.000 12.06 0.00 0.00 1.78
2698 2781 2.492088 AGTACAGACACAAGCGCTCATA 59.508 45.455 12.06 0.00 0.00 2.15
2699 2782 1.273606 AGTACAGACACAAGCGCTCAT 59.726 47.619 12.06 0.00 0.00 2.90
2700 2783 0.673985 AGTACAGACACAAGCGCTCA 59.326 50.000 12.06 0.00 0.00 4.26
2701 2784 1.063806 CAGTACAGACACAAGCGCTC 58.936 55.000 12.06 0.00 0.00 5.03
2702 2785 0.673985 TCAGTACAGACACAAGCGCT 59.326 50.000 2.64 2.64 0.00 5.92
2703 2786 1.391485 CATCAGTACAGACACAAGCGC 59.609 52.381 0.00 0.00 0.00 5.92
2704 2787 2.677199 ACATCAGTACAGACACAAGCG 58.323 47.619 0.00 0.00 0.00 4.68
2705 2788 4.058124 TGAACATCAGTACAGACACAAGC 58.942 43.478 0.00 0.00 0.00 4.01
2706 2789 6.603237 TTTGAACATCAGTACAGACACAAG 57.397 37.500 0.00 0.00 0.00 3.16
2707 2790 6.993786 TTTTGAACATCAGTACAGACACAA 57.006 33.333 0.00 0.00 0.00 3.33
2708 2791 6.993786 TTTTTGAACATCAGTACAGACACA 57.006 33.333 0.00 0.00 0.00 3.72
2739 2822 0.109913 GGAGCAGGCATCATGGATGA 59.890 55.000 10.24 0.00 42.09 2.92
2740 2823 1.235281 CGGAGCAGGCATCATGGATG 61.235 60.000 1.90 1.90 42.37 3.51
2741 2824 1.072678 CGGAGCAGGCATCATGGAT 59.927 57.895 0.00 0.00 0.00 3.41
2742 2825 2.507452 CGGAGCAGGCATCATGGA 59.493 61.111 0.00 0.00 0.00 3.41
2755 2838 2.409870 GCAAGGATGGTTGGCGGAG 61.410 63.158 0.00 0.00 0.00 4.63
2756 2839 2.361104 GCAAGGATGGTTGGCGGA 60.361 61.111 0.00 0.00 0.00 5.54
2757 2840 3.451894 GGCAAGGATGGTTGGCGG 61.452 66.667 0.00 0.00 42.40 6.13
2759 2842 4.133796 GCGGCAAGGATGGTTGGC 62.134 66.667 0.00 0.30 46.75 4.52
2760 2843 3.451894 GGCGGCAAGGATGGTTGG 61.452 66.667 3.07 0.00 0.00 3.77
2761 2844 2.361610 AGGCGGCAAGGATGGTTG 60.362 61.111 13.08 0.00 0.00 3.77
2762 2845 2.361610 CAGGCGGCAAGGATGGTT 60.362 61.111 13.08 0.00 0.00 3.67
2772 2855 4.228567 GGAGGTAGAGCAGGCGGC 62.229 72.222 0.00 0.00 45.30 6.53
2773 2856 2.093537 GATGGAGGTAGAGCAGGCGG 62.094 65.000 0.00 0.00 0.00 6.13
2774 2857 1.365633 GATGGAGGTAGAGCAGGCG 59.634 63.158 0.00 0.00 0.00 5.52
2775 2858 1.751563 GGATGGAGGTAGAGCAGGC 59.248 63.158 0.00 0.00 0.00 4.85
2776 2859 0.757188 ACGGATGGAGGTAGAGCAGG 60.757 60.000 0.00 0.00 0.00 4.85
2777 2860 1.067821 GAACGGATGGAGGTAGAGCAG 59.932 57.143 0.00 0.00 0.00 4.24
2778 2861 1.112113 GAACGGATGGAGGTAGAGCA 58.888 55.000 0.00 0.00 0.00 4.26
2779 2862 0.389757 GGAACGGATGGAGGTAGAGC 59.610 60.000 0.00 0.00 0.00 4.09
2794 2877 0.933047 GGCAGCAACGAAAACGGAAC 60.933 55.000 0.00 0.00 0.00 3.62
2795 2878 1.357334 GGCAGCAACGAAAACGGAA 59.643 52.632 0.00 0.00 0.00 4.30
2796 2879 1.169661 ATGGCAGCAACGAAAACGGA 61.170 50.000 0.00 0.00 0.00 4.69
2797 2880 0.318614 AATGGCAGCAACGAAAACGG 60.319 50.000 0.00 0.00 0.00 4.44
2798 2881 1.189884 CAAATGGCAGCAACGAAAACG 59.810 47.619 0.00 0.00 0.00 3.60
2799 2882 2.200899 ACAAATGGCAGCAACGAAAAC 58.799 42.857 0.00 0.00 0.00 2.43
2800 2883 2.593346 ACAAATGGCAGCAACGAAAA 57.407 40.000 0.00 0.00 0.00 2.29
2801 2884 2.468831 GAACAAATGGCAGCAACGAAA 58.531 42.857 0.00 0.00 0.00 3.46
2802 2885 2.132740 GAACAAATGGCAGCAACGAA 57.867 45.000 0.00 0.00 0.00 3.85
2803 2886 3.863681 GAACAAATGGCAGCAACGA 57.136 47.368 0.00 0.00 0.00 3.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.