Multiple sequence alignment - TraesCS5A01G027500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G027500 chr5A 100.000 2432 0 0 1 2432 22987220 22984789 0.000000e+00 4492
1 TraesCS5A01G027500 chr5A 80.455 220 32 6 209 426 601103645 601103435 9.000000e-35 158
2 TraesCS5A01G027500 chr5B 91.190 1941 95 32 536 2432 25668845 25666937 0.000000e+00 2567
3 TraesCS5A01G027500 chr5B 81.006 179 24 7 238 415 470116371 470116202 1.520000e-27 134
4 TraesCS5A01G027500 chr5D 96.429 784 19 8 1641 2422 34445518 34444742 0.000000e+00 1284
5 TraesCS5A01G027500 chr5D 90.564 975 51 23 560 1509 34446610 34445652 0.000000e+00 1253
6 TraesCS5A01G027500 chr2B 82.659 173 24 2 243 415 522304300 522304466 5.420000e-32 148
7 TraesCS5A01G027500 chr2B 84.967 153 15 6 236 385 522539416 522539563 5.420000e-32 148
8 TraesCS5A01G027500 chr2B 80.402 199 28 6 218 415 390124239 390124427 9.070000e-30 141
9 TraesCS5A01G027500 chr6B 79.412 238 25 12 203 431 487032161 487031939 1.950000e-31 147
10 TraesCS5A01G027500 chr7B 80.000 195 30 7 221 415 445292954 445292769 4.220000e-28 135
11 TraesCS5A01G027500 chr1D 77.778 243 35 11 206 435 152586424 152586188 5.460000e-27 132
12 TraesCS5A01G027500 chr3D 80.925 173 24 4 245 415 330681347 330681182 7.060000e-26 128


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G027500 chr5A 22984789 22987220 2431 True 4492.0 4492 100.0000 1 2432 1 chr5A.!!$R1 2431
1 TraesCS5A01G027500 chr5B 25666937 25668845 1908 True 2567.0 2567 91.1900 536 2432 1 chr5B.!!$R1 1896
2 TraesCS5A01G027500 chr5D 34444742 34446610 1868 True 1268.5 1284 93.4965 560 2422 2 chr5D.!!$R1 1862

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
765 770 0.037326 TAAGCAGGCGTTGACCAGAG 60.037 55.0 0.0 0.0 0.0 3.35 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1614 1673 0.452987 CATGGTTTGGAGATGTGCCG 59.547 55.0 0.0 0.0 0.0 5.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 2.890474 CGTTGCGGGCTAGCGATT 60.890 61.111 9.00 0.00 40.67 3.34
19 20 1.590525 CGTTGCGGGCTAGCGATTA 60.591 57.895 9.00 0.00 40.67 1.75
20 21 1.548973 CGTTGCGGGCTAGCGATTAG 61.549 60.000 9.00 0.00 40.67 1.73
30 31 3.387603 GCGATTAGCGAGCGGACG 61.388 66.667 0.00 0.00 44.57 4.79
31 32 2.326897 CGATTAGCGAGCGGACGA 59.673 61.111 0.00 0.00 44.57 4.20
32 33 2.004489 CGATTAGCGAGCGGACGAC 61.004 63.158 0.00 0.00 44.57 4.34
34 35 3.465296 ATTAGCGAGCGGACGACGG 62.465 63.158 0.00 0.00 44.51 4.79
43 44 3.499737 GGACGACGGCTGGCATTG 61.500 66.667 0.00 0.00 0.00 2.82
44 45 3.499737 GACGACGGCTGGCATTGG 61.500 66.667 0.00 0.00 0.00 3.16
50 51 2.414594 GGCTGGCATTGGCGAATC 59.585 61.111 5.68 0.00 42.47 2.52
51 52 2.025156 GCTGGCATTGGCGAATCG 59.975 61.111 5.68 0.00 42.47 3.34
52 53 2.717485 CTGGCATTGGCGAATCGG 59.283 61.111 4.35 0.00 42.47 4.18
53 54 2.828095 TGGCATTGGCGAATCGGG 60.828 61.111 4.35 0.00 42.47 5.14
54 55 4.270376 GGCATTGGCGAATCGGGC 62.270 66.667 4.35 0.00 42.47 6.13
55 56 3.517140 GCATTGGCGAATCGGGCA 61.517 61.111 4.35 0.80 41.13 5.36
56 57 2.408835 CATTGGCGAATCGGGCAC 59.591 61.111 4.35 0.00 42.69 5.01
57 58 2.114670 CATTGGCGAATCGGGCACT 61.115 57.895 4.35 0.00 42.69 4.40
58 59 2.114670 ATTGGCGAATCGGGCACTG 61.115 57.895 4.35 0.00 42.69 3.66
61 62 3.869272 GCGAATCGGGCACTGCAG 61.869 66.667 13.48 13.48 32.53 4.41
62 63 3.869272 CGAATCGGGCACTGCAGC 61.869 66.667 15.27 0.33 32.53 5.25
63 64 3.869272 GAATCGGGCACTGCAGCG 61.869 66.667 15.27 9.53 34.64 5.18
89 90 4.845580 CAGGCCCGGCTGTAGCTG 62.846 72.222 9.86 5.72 46.63 4.24
96 97 3.833304 GGCTGTAGCTGATTGGGC 58.167 61.111 0.00 0.00 41.70 5.36
97 98 1.077501 GGCTGTAGCTGATTGGGCA 60.078 57.895 0.00 0.00 41.70 5.36
98 99 1.379642 GGCTGTAGCTGATTGGGCAC 61.380 60.000 0.00 0.00 41.70 5.01
99 100 0.393537 GCTGTAGCTGATTGGGCACT 60.394 55.000 0.00 0.00 38.21 4.40
100 101 1.376543 CTGTAGCTGATTGGGCACTG 58.623 55.000 0.00 0.00 0.00 3.66
101 102 0.677731 TGTAGCTGATTGGGCACTGC 60.678 55.000 0.00 0.00 0.00 4.40
102 103 0.677731 GTAGCTGATTGGGCACTGCA 60.678 55.000 2.82 0.00 34.35 4.41
103 104 0.393402 TAGCTGATTGGGCACTGCAG 60.393 55.000 13.48 13.48 34.35 4.41
104 105 2.882876 CTGATTGGGCACTGCAGC 59.117 61.111 15.27 0.33 0.00 5.25
105 106 3.047718 CTGATTGGGCACTGCAGCG 62.048 63.158 15.27 5.22 34.64 5.18
106 107 3.818787 GATTGGGCACTGCAGCGG 61.819 66.667 15.27 7.71 34.64 5.52
140 141 2.765807 GCTGGCAGGGAGAGGCTA 60.766 66.667 17.64 0.00 0.00 3.93
141 142 2.806009 GCTGGCAGGGAGAGGCTAG 61.806 68.421 17.64 0.00 41.04 3.42
142 143 2.765807 TGGCAGGGAGAGGCTAGC 60.766 66.667 6.04 6.04 0.00 3.42
143 144 2.765807 GGCAGGGAGAGGCTAGCA 60.766 66.667 18.24 0.00 0.00 3.49
144 145 2.370445 GGCAGGGAGAGGCTAGCAA 61.370 63.158 18.24 0.00 0.00 3.91
145 146 1.153269 GCAGGGAGAGGCTAGCAAC 60.153 63.158 18.24 9.63 0.00 4.17
146 147 1.142748 CAGGGAGAGGCTAGCAACG 59.857 63.158 18.24 0.00 0.00 4.10
147 148 2.060980 AGGGAGAGGCTAGCAACGG 61.061 63.158 18.24 0.00 0.00 4.44
148 149 2.501610 GGAGAGGCTAGCAACGGG 59.498 66.667 18.24 0.00 0.00 5.28
149 150 2.202946 GAGAGGCTAGCAACGGGC 60.203 66.667 18.24 0.00 45.30 6.13
196 197 3.646976 CAGCGCGGCAGATGGATG 61.647 66.667 8.83 0.00 0.00 3.51
197 198 4.923942 AGCGCGGCAGATGGATGG 62.924 66.667 8.83 0.00 0.00 3.51
200 201 4.881440 GCGGCAGATGGATGGGCA 62.881 66.667 0.00 0.00 0.00 5.36
201 202 2.903855 CGGCAGATGGATGGGCAC 60.904 66.667 0.00 0.00 0.00 5.01
202 203 2.903855 GGCAGATGGATGGGCACG 60.904 66.667 0.00 0.00 0.00 5.34
203 204 3.589881 GCAGATGGATGGGCACGC 61.590 66.667 0.00 0.00 0.00 5.34
204 205 2.124612 CAGATGGATGGGCACGCA 60.125 61.111 0.00 0.00 0.00 5.24
205 206 2.124570 AGATGGATGGGCACGCAC 60.125 61.111 0.00 0.00 0.00 5.34
206 207 3.576356 GATGGATGGGCACGCACG 61.576 66.667 0.00 0.00 0.00 5.34
266 267 4.139420 CGACGGCTGCAGCGAAAG 62.139 66.667 31.19 23.04 43.26 2.62
267 268 2.738521 GACGGCTGCAGCGAAAGA 60.739 61.111 31.19 0.00 43.26 2.52
268 269 3.016474 GACGGCTGCAGCGAAAGAC 62.016 63.158 31.19 18.08 43.26 3.01
269 270 2.740055 CGGCTGCAGCGAAAGACT 60.740 61.111 31.19 0.00 43.26 3.24
270 271 1.446099 CGGCTGCAGCGAAAGACTA 60.446 57.895 31.19 0.00 43.26 2.59
271 272 1.416813 CGGCTGCAGCGAAAGACTAG 61.417 60.000 31.19 10.34 43.26 2.57
272 273 1.086634 GGCTGCAGCGAAAGACTAGG 61.087 60.000 31.19 0.00 43.26 3.02
273 274 1.086634 GCTGCAGCGAAAGACTAGGG 61.087 60.000 25.23 0.00 0.00 3.53
274 275 0.460987 CTGCAGCGAAAGACTAGGGG 60.461 60.000 0.00 0.00 0.00 4.79
275 276 1.192146 TGCAGCGAAAGACTAGGGGT 61.192 55.000 0.00 0.00 0.00 4.95
276 277 0.822164 GCAGCGAAAGACTAGGGGTA 59.178 55.000 0.00 0.00 0.00 3.69
277 278 1.206371 GCAGCGAAAGACTAGGGGTAA 59.794 52.381 0.00 0.00 0.00 2.85
278 279 2.354403 GCAGCGAAAGACTAGGGGTAAA 60.354 50.000 0.00 0.00 0.00 2.01
279 280 3.867216 GCAGCGAAAGACTAGGGGTAAAA 60.867 47.826 0.00 0.00 0.00 1.52
280 281 3.683340 CAGCGAAAGACTAGGGGTAAAAC 59.317 47.826 0.00 0.00 0.00 2.43
281 282 3.005554 GCGAAAGACTAGGGGTAAAACC 58.994 50.000 0.00 0.00 37.60 3.27
282 283 3.307269 GCGAAAGACTAGGGGTAAAACCT 60.307 47.826 0.00 0.00 38.64 3.50
283 284 4.081476 GCGAAAGACTAGGGGTAAAACCTA 60.081 45.833 0.00 0.00 38.64 3.08
284 285 5.569428 GCGAAAGACTAGGGGTAAAACCTAA 60.569 44.000 0.00 0.00 39.94 2.69
285 286 6.466812 CGAAAGACTAGGGGTAAAACCTAAA 58.533 40.000 0.00 0.00 39.94 1.85
286 287 6.936335 CGAAAGACTAGGGGTAAAACCTAAAA 59.064 38.462 0.00 0.00 39.94 1.52
287 288 7.445096 CGAAAGACTAGGGGTAAAACCTAAAAA 59.555 37.037 0.00 0.00 39.94 1.94
288 289 8.469309 AAAGACTAGGGGTAAAACCTAAAAAC 57.531 34.615 0.00 0.00 39.94 2.43
289 290 7.398289 AGACTAGGGGTAAAACCTAAAAACT 57.602 36.000 0.00 0.00 39.94 2.66
290 291 7.229308 AGACTAGGGGTAAAACCTAAAAACTG 58.771 38.462 0.00 0.00 39.94 3.16
291 292 7.072834 AGACTAGGGGTAAAACCTAAAAACTGA 59.927 37.037 0.00 0.00 39.94 3.41
292 293 7.762610 ACTAGGGGTAAAACCTAAAAACTGAT 58.237 34.615 0.00 0.00 39.94 2.90
293 294 8.893560 ACTAGGGGTAAAACCTAAAAACTGATA 58.106 33.333 0.00 0.00 39.94 2.15
294 295 9.170734 CTAGGGGTAAAACCTAAAAACTGATAC 57.829 37.037 0.00 0.00 39.94 2.24
295 296 6.950041 AGGGGTAAAACCTAAAAACTGATACC 59.050 38.462 0.00 0.00 38.64 2.73
296 297 6.720748 GGGGTAAAACCTAAAAACTGATACCA 59.279 38.462 0.00 0.00 38.64 3.25
297 298 7.398047 GGGGTAAAACCTAAAAACTGATACCAT 59.602 37.037 0.00 0.00 38.64 3.55
298 299 8.248253 GGGTAAAACCTAAAAACTGATACCATG 58.752 37.037 0.00 0.00 38.64 3.66
299 300 8.799367 GGTAAAACCTAAAAACTGATACCATGT 58.201 33.333 0.00 0.00 34.73 3.21
303 304 9.747898 AAACCTAAAAACTGATACCATGTATGA 57.252 29.630 0.00 0.00 0.00 2.15
304 305 9.920946 AACCTAAAAACTGATACCATGTATGAT 57.079 29.630 0.00 0.00 0.00 2.45
305 306 9.920946 ACCTAAAAACTGATACCATGTATGATT 57.079 29.630 0.00 0.00 0.00 2.57
307 308 9.669353 CTAAAAACTGATACCATGTATGATTGC 57.331 33.333 0.00 0.00 0.00 3.56
308 309 7.643569 AAAACTGATACCATGTATGATTGCA 57.356 32.000 0.00 0.00 0.00 4.08
309 310 6.624352 AACTGATACCATGTATGATTGCAC 57.376 37.500 0.00 0.00 0.00 4.57
310 311 4.751600 ACTGATACCATGTATGATTGCACG 59.248 41.667 0.00 0.00 0.00 5.34
311 312 4.954875 TGATACCATGTATGATTGCACGA 58.045 39.130 0.00 0.00 0.00 4.35
312 313 5.550290 TGATACCATGTATGATTGCACGAT 58.450 37.500 0.00 0.00 0.00 3.73
313 314 5.409214 TGATACCATGTATGATTGCACGATG 59.591 40.000 0.00 0.00 0.00 3.84
314 315 3.544684 ACCATGTATGATTGCACGATGT 58.455 40.909 0.00 0.00 0.00 3.06
315 316 3.313249 ACCATGTATGATTGCACGATGTG 59.687 43.478 0.00 0.00 36.51 3.21
316 317 3.313249 CCATGTATGATTGCACGATGTGT 59.687 43.478 0.00 0.00 35.75 3.72
317 318 4.201940 CCATGTATGATTGCACGATGTGTT 60.202 41.667 0.00 0.00 35.75 3.32
318 319 4.339439 TGTATGATTGCACGATGTGTTG 57.661 40.909 0.00 0.00 35.75 3.33
319 320 2.267188 ATGATTGCACGATGTGTTGC 57.733 45.000 0.00 0.00 35.75 4.17
320 321 1.237533 TGATTGCACGATGTGTTGCT 58.762 45.000 0.00 0.00 35.75 3.91
321 322 1.197492 TGATTGCACGATGTGTTGCTC 59.803 47.619 0.00 0.00 35.75 4.26
322 323 1.466167 GATTGCACGATGTGTTGCTCT 59.534 47.619 0.00 0.00 35.75 4.09
323 324 1.308047 TTGCACGATGTGTTGCTCTT 58.692 45.000 0.00 0.00 35.75 2.85
324 325 0.867746 TGCACGATGTGTTGCTCTTC 59.132 50.000 0.00 0.00 35.75 2.87
325 326 0.867746 GCACGATGTGTTGCTCTTCA 59.132 50.000 0.00 0.00 35.75 3.02
326 327 1.466167 GCACGATGTGTTGCTCTTCAT 59.534 47.619 0.00 0.00 35.75 2.57
327 328 2.726989 GCACGATGTGTTGCTCTTCATG 60.727 50.000 0.00 0.00 35.75 3.07
328 329 1.466167 ACGATGTGTTGCTCTTCATGC 59.534 47.619 0.00 0.00 0.00 4.06
329 330 1.465777 CGATGTGTTGCTCTTCATGCA 59.534 47.619 0.00 0.00 38.80 3.96
330 331 2.096980 CGATGTGTTGCTCTTCATGCAT 59.903 45.455 0.00 0.00 40.34 3.96
331 332 3.435566 GATGTGTTGCTCTTCATGCATG 58.564 45.455 21.07 21.07 40.34 4.06
332 333 1.542472 TGTGTTGCTCTTCATGCATGG 59.458 47.619 25.97 11.53 40.34 3.66
333 334 1.814394 GTGTTGCTCTTCATGCATGGA 59.186 47.619 25.97 17.63 40.34 3.41
334 335 1.814394 TGTTGCTCTTCATGCATGGAC 59.186 47.619 25.97 6.98 40.34 4.02
335 336 1.814394 GTTGCTCTTCATGCATGGACA 59.186 47.619 25.97 9.70 40.34 4.02
336 337 1.456296 TGCTCTTCATGCATGGACAC 58.544 50.000 25.97 12.67 35.31 3.67
337 338 1.271488 TGCTCTTCATGCATGGACACA 60.271 47.619 25.97 14.94 35.31 3.72
338 339 1.131883 GCTCTTCATGCATGGACACAC 59.868 52.381 25.97 8.57 0.00 3.82
339 340 2.429478 CTCTTCATGCATGGACACACA 58.571 47.619 25.97 2.13 0.00 3.72
340 341 2.153645 TCTTCATGCATGGACACACAC 58.846 47.619 25.97 0.00 0.00 3.82
341 342 1.881324 CTTCATGCATGGACACACACA 59.119 47.619 25.97 0.55 0.00 3.72
342 343 2.203470 TCATGCATGGACACACACAT 57.797 45.000 25.97 0.00 0.00 3.21
343 344 3.347077 TCATGCATGGACACACACATA 57.653 42.857 25.97 0.00 0.00 2.29
344 345 3.888583 TCATGCATGGACACACACATAT 58.111 40.909 25.97 0.00 0.00 1.78
345 346 5.033589 TCATGCATGGACACACACATATA 57.966 39.130 25.97 0.00 0.00 0.86
346 347 5.623169 TCATGCATGGACACACACATATAT 58.377 37.500 25.97 0.00 0.00 0.86
347 348 6.767456 TCATGCATGGACACACACATATATA 58.233 36.000 25.97 0.00 0.00 0.86
348 349 7.396418 TCATGCATGGACACACACATATATAT 58.604 34.615 25.97 0.00 0.00 0.86
349 350 8.538701 TCATGCATGGACACACACATATATATA 58.461 33.333 25.97 0.00 0.00 0.86
350 351 9.333724 CATGCATGGACACACACATATATATAT 57.666 33.333 19.40 0.00 0.00 0.86
373 374 7.844493 ATAATATACAAAGGTAGGTCACGGA 57.156 36.000 0.00 0.00 31.88 4.69
374 375 3.881937 ATACAAAGGTAGGTCACGGAC 57.118 47.619 0.00 0.00 31.88 4.79
390 391 7.656707 GTCACGGACCTTAACTATACAAAAA 57.343 36.000 0.00 0.00 0.00 1.94
411 412 4.725790 AATTAGAAGACAAGCCCAATGC 57.274 40.909 0.00 0.00 41.71 3.56
412 413 2.877097 TAGAAGACAAGCCCAATGCA 57.123 45.000 0.00 0.00 44.83 3.96
413 414 1.251251 AGAAGACAAGCCCAATGCAC 58.749 50.000 0.00 0.00 44.83 4.57
414 415 0.961019 GAAGACAAGCCCAATGCACA 59.039 50.000 0.00 0.00 44.83 4.57
415 416 1.547372 GAAGACAAGCCCAATGCACAT 59.453 47.619 0.00 0.00 44.83 3.21
416 417 2.512692 AGACAAGCCCAATGCACATA 57.487 45.000 0.00 0.00 44.83 2.29
417 418 2.806434 AGACAAGCCCAATGCACATAA 58.194 42.857 0.00 0.00 44.83 1.90
418 419 3.368248 AGACAAGCCCAATGCACATAAT 58.632 40.909 0.00 0.00 44.83 1.28
419 420 4.535781 AGACAAGCCCAATGCACATAATA 58.464 39.130 0.00 0.00 44.83 0.98
420 421 4.339247 AGACAAGCCCAATGCACATAATAC 59.661 41.667 0.00 0.00 44.83 1.89
421 422 4.022603 ACAAGCCCAATGCACATAATACA 58.977 39.130 0.00 0.00 44.83 2.29
422 423 4.650588 ACAAGCCCAATGCACATAATACAT 59.349 37.500 0.00 0.00 44.83 2.29
423 424 5.832595 ACAAGCCCAATGCACATAATACATA 59.167 36.000 0.00 0.00 44.83 2.29
424 425 6.494491 ACAAGCCCAATGCACATAATACATAT 59.506 34.615 0.00 0.00 44.83 1.78
425 426 7.669304 ACAAGCCCAATGCACATAATACATATA 59.331 33.333 0.00 0.00 44.83 0.86
426 427 7.630242 AGCCCAATGCACATAATACATATAC 57.370 36.000 0.00 0.00 44.83 1.47
427 428 7.405292 AGCCCAATGCACATAATACATATACT 58.595 34.615 0.00 0.00 44.83 2.12
428 429 7.554118 AGCCCAATGCACATAATACATATACTC 59.446 37.037 0.00 0.00 44.83 2.59
429 430 7.336679 GCCCAATGCACATAATACATATACTCA 59.663 37.037 0.00 0.00 40.77 3.41
430 431 9.230122 CCCAATGCACATAATACATATACTCAA 57.770 33.333 0.00 0.00 0.00 3.02
443 444 9.698309 ATACATATACTCAACACTATCAACAGC 57.302 33.333 0.00 0.00 0.00 4.40
444 445 6.697455 ACATATACTCAACACTATCAACAGCG 59.303 38.462 0.00 0.00 0.00 5.18
445 446 2.069273 ACTCAACACTATCAACAGCGC 58.931 47.619 0.00 0.00 0.00 5.92
446 447 2.068519 CTCAACACTATCAACAGCGCA 58.931 47.619 11.47 0.00 0.00 6.09
447 448 2.674852 CTCAACACTATCAACAGCGCAT 59.325 45.455 11.47 0.00 0.00 4.73
448 449 2.416202 TCAACACTATCAACAGCGCATG 59.584 45.455 11.47 7.81 0.00 4.06
449 450 0.729116 ACACTATCAACAGCGCATGC 59.271 50.000 11.47 7.91 43.24 4.06
463 464 4.845621 GCGCATGCTTTCAAAACATTAT 57.154 36.364 17.13 0.00 38.39 1.28
464 465 4.814465 GCGCATGCTTTCAAAACATTATC 58.186 39.130 17.13 0.00 38.39 1.75
465 466 4.563976 GCGCATGCTTTCAAAACATTATCT 59.436 37.500 17.13 0.00 38.39 1.98
466 467 5.062558 GCGCATGCTTTCAAAACATTATCTT 59.937 36.000 17.13 0.00 38.39 2.40
467 468 6.463478 CGCATGCTTTCAAAACATTATCTTG 58.537 36.000 17.13 0.00 0.00 3.02
468 469 6.454583 CGCATGCTTTCAAAACATTATCTTGG 60.455 38.462 17.13 0.00 0.00 3.61
469 470 6.591062 GCATGCTTTCAAAACATTATCTTGGA 59.409 34.615 11.37 0.00 0.00 3.53
470 471 7.279313 GCATGCTTTCAAAACATTATCTTGGAT 59.721 33.333 11.37 0.00 0.00 3.41
471 472 8.600625 CATGCTTTCAAAACATTATCTTGGATG 58.399 33.333 0.00 0.00 0.00 3.51
472 473 7.894708 TGCTTTCAAAACATTATCTTGGATGA 58.105 30.769 0.00 0.00 0.00 2.92
473 474 8.030692 TGCTTTCAAAACATTATCTTGGATGAG 58.969 33.333 0.00 0.00 0.00 2.90
474 475 7.009907 GCTTTCAAAACATTATCTTGGATGAGC 59.990 37.037 0.00 0.00 0.00 4.26
475 476 7.707624 TTCAAAACATTATCTTGGATGAGCT 57.292 32.000 0.00 0.00 0.00 4.09
476 477 7.707624 TCAAAACATTATCTTGGATGAGCTT 57.292 32.000 0.00 0.00 0.00 3.74
477 478 8.806429 TCAAAACATTATCTTGGATGAGCTTA 57.194 30.769 0.00 0.00 0.00 3.09
478 479 9.412460 TCAAAACATTATCTTGGATGAGCTTAT 57.588 29.630 0.00 0.00 0.00 1.73
488 489 8.181904 TCTTGGATGAGCTTATTTTTCTTTGT 57.818 30.769 0.00 0.00 0.00 2.83
489 490 8.641541 TCTTGGATGAGCTTATTTTTCTTTGTT 58.358 29.630 0.00 0.00 0.00 2.83
490 491 9.264719 CTTGGATGAGCTTATTTTTCTTTGTTT 57.735 29.630 0.00 0.00 0.00 2.83
491 492 9.612066 TTGGATGAGCTTATTTTTCTTTGTTTT 57.388 25.926 0.00 0.00 0.00 2.43
492 493 9.260002 TGGATGAGCTTATTTTTCTTTGTTTTC 57.740 29.630 0.00 0.00 0.00 2.29
493 494 8.427774 GGATGAGCTTATTTTTCTTTGTTTTCG 58.572 33.333 0.00 0.00 0.00 3.46
494 495 7.160633 TGAGCTTATTTTTCTTTGTTTTCGC 57.839 32.000 0.00 0.00 0.00 4.70
495 496 6.978080 TGAGCTTATTTTTCTTTGTTTTCGCT 59.022 30.769 0.00 0.00 0.00 4.93
496 497 8.132362 TGAGCTTATTTTTCTTTGTTTTCGCTA 58.868 29.630 0.00 0.00 0.00 4.26
497 498 8.507470 AGCTTATTTTTCTTTGTTTTCGCTAG 57.493 30.769 0.00 0.00 0.00 3.42
498 499 8.349983 AGCTTATTTTTCTTTGTTTTCGCTAGA 58.650 29.630 0.00 0.00 0.00 2.43
499 500 8.630840 GCTTATTTTTCTTTGTTTTCGCTAGAG 58.369 33.333 0.00 0.00 0.00 2.43
500 501 9.118236 CTTATTTTTCTTTGTTTTCGCTAGAGG 57.882 33.333 0.00 0.00 0.00 3.69
501 502 6.687081 TTTTTCTTTGTTTTCGCTAGAGGA 57.313 33.333 0.00 0.00 0.00 3.71
502 503 6.877611 TTTTCTTTGTTTTCGCTAGAGGAT 57.122 33.333 0.00 0.00 0.00 3.24
503 504 7.972832 TTTTCTTTGTTTTCGCTAGAGGATA 57.027 32.000 0.00 0.00 0.00 2.59
504 505 7.596749 TTTCTTTGTTTTCGCTAGAGGATAG 57.403 36.000 0.00 0.00 0.00 2.08
505 506 6.525578 TCTTTGTTTTCGCTAGAGGATAGA 57.474 37.500 0.00 0.00 0.00 1.98
506 507 6.331061 TCTTTGTTTTCGCTAGAGGATAGAC 58.669 40.000 0.00 0.00 0.00 2.59
507 508 5.654603 TTGTTTTCGCTAGAGGATAGACA 57.345 39.130 0.00 0.00 0.00 3.41
508 509 4.995124 TGTTTTCGCTAGAGGATAGACAC 58.005 43.478 0.00 0.00 0.00 3.67
509 510 4.461431 TGTTTTCGCTAGAGGATAGACACA 59.539 41.667 0.00 0.00 0.00 3.72
510 511 5.127194 TGTTTTCGCTAGAGGATAGACACAT 59.873 40.000 0.00 0.00 0.00 3.21
511 512 6.320418 TGTTTTCGCTAGAGGATAGACACATA 59.680 38.462 0.00 0.00 0.00 2.29
512 513 6.561737 TTTCGCTAGAGGATAGACACATAG 57.438 41.667 0.00 0.00 0.00 2.23
513 514 5.230323 TCGCTAGAGGATAGACACATAGT 57.770 43.478 0.00 0.00 0.00 2.12
514 515 5.622180 TCGCTAGAGGATAGACACATAGTT 58.378 41.667 0.00 0.00 0.00 2.24
515 516 5.470437 TCGCTAGAGGATAGACACATAGTTG 59.530 44.000 0.00 0.00 0.00 3.16
516 517 5.465935 GCTAGAGGATAGACACATAGTTGC 58.534 45.833 0.00 0.00 0.00 4.17
517 518 5.242838 GCTAGAGGATAGACACATAGTTGCT 59.757 44.000 0.00 0.00 0.00 3.91
518 519 6.431543 GCTAGAGGATAGACACATAGTTGCTA 59.568 42.308 0.00 0.00 0.00 3.49
519 520 6.892658 AGAGGATAGACACATAGTTGCTAG 57.107 41.667 0.00 0.00 0.00 3.42
520 521 6.369629 AGAGGATAGACACATAGTTGCTAGT 58.630 40.000 0.00 0.00 0.00 2.57
521 522 6.836527 AGAGGATAGACACATAGTTGCTAGTT 59.163 38.462 0.00 0.00 0.00 2.24
522 523 7.343316 AGAGGATAGACACATAGTTGCTAGTTT 59.657 37.037 0.00 0.00 0.00 2.66
523 524 8.534954 AGGATAGACACATAGTTGCTAGTTTA 57.465 34.615 0.00 0.00 0.00 2.01
524 525 9.148879 AGGATAGACACATAGTTGCTAGTTTAT 57.851 33.333 0.00 0.00 0.00 1.40
525 526 9.765795 GGATAGACACATAGTTGCTAGTTTATT 57.234 33.333 0.00 0.00 0.00 1.40
552 553 4.055360 GGTGGTAAAACATTGCTGGTTTC 58.945 43.478 0.00 0.00 41.38 2.78
576 577 1.141665 CATCTCATCCACGTCGCCA 59.858 57.895 0.00 0.00 0.00 5.69
611 612 0.249868 CCCTGCTCAACACGTCTGAA 60.250 55.000 0.00 0.00 0.00 3.02
639 640 2.527951 ATCAGCAGGCCGGAGTTGAC 62.528 60.000 5.05 0.00 0.00 3.18
765 770 0.037326 TAAGCAGGCGTTGACCAGAG 60.037 55.000 0.00 0.00 0.00 3.35
811 816 1.378882 CCACCACCGCCTGATGATTG 61.379 60.000 0.00 0.00 0.00 2.67
813 818 1.452651 CCACCGCCTGATGATTGCT 60.453 57.895 0.00 0.00 0.00 3.91
852 857 5.766590 TCCCATCCGATCAGATAGCTTATA 58.233 41.667 0.00 0.00 0.00 0.98
875 892 2.362397 TCTTCCATACTGATGCGGAGAC 59.638 50.000 0.00 0.00 0.00 3.36
876 893 2.073252 TCCATACTGATGCGGAGACT 57.927 50.000 0.00 0.00 0.00 3.24
880 897 3.244009 CCATACTGATGCGGAGACTGATT 60.244 47.826 0.00 0.00 0.00 2.57
899 916 2.725203 TAGCGGCCGTTGACTTTGCT 62.725 55.000 28.70 14.09 35.12 3.91
952 969 3.586961 CTCATCTCGCTCGCCGGA 61.587 66.667 5.05 0.00 37.59 5.14
954 971 3.893763 CATCTCGCTCGCCGGAGT 61.894 66.667 5.05 0.00 42.53 3.85
956 973 4.779966 TCTCGCTCGCCGGAGTCT 62.780 66.667 5.05 0.00 42.53 3.24
1164 1193 3.177920 GACGTCGAGCTGCAGCAG 61.178 66.667 38.24 30.04 45.16 4.24
1165 1194 4.731612 ACGTCGAGCTGCAGCAGG 62.732 66.667 38.24 28.31 45.16 4.85
1214 1243 4.912395 GCCCAAGGTGGTGGTGCA 62.912 66.667 0.00 0.00 36.90 4.57
1217 1246 3.964875 CAAGGTGGTGGTGCACGC 61.965 66.667 11.45 6.11 34.83 5.34
1433 1483 2.785258 GCCGAGCCAAACGTGATC 59.215 61.111 0.00 0.00 0.00 2.92
1435 1485 1.696832 GCCGAGCCAAACGTGATCTC 61.697 60.000 0.00 0.00 0.00 2.75
1438 1488 1.656095 CGAGCCAAACGTGATCTCTTC 59.344 52.381 0.00 0.00 0.00 2.87
1442 1499 4.894784 AGCCAAACGTGATCTCTTCTTTA 58.105 39.130 0.00 0.00 0.00 1.85
1474 1531 3.679980 TCTCGAGATGTAAAGCAAAGTGC 59.320 43.478 12.08 0.00 45.46 4.40
1499 1556 9.400638 GCATGTATAGTTCTGTATACTTCACTC 57.599 37.037 4.17 0.00 36.97 3.51
1547 1605 2.546778 TCGGTCGCATTCTAAATCACC 58.453 47.619 0.00 0.00 0.00 4.02
1583 1642 3.898509 CGAGCCAGCCGGAGAGAG 61.899 72.222 5.05 0.00 0.00 3.20
1584 1643 2.441164 GAGCCAGCCGGAGAGAGA 60.441 66.667 5.05 0.00 0.00 3.10
1585 1644 2.441901 AGCCAGCCGGAGAGAGAG 60.442 66.667 5.05 0.00 0.00 3.20
1633 1692 0.452987 CGGCACATCTCCAAACCATG 59.547 55.000 0.00 0.00 0.00 3.66
1797 1943 8.750515 TCATTATTCATTGGAGATAAACAGCA 57.249 30.769 0.00 0.00 0.00 4.41
1862 2011 3.550275 CGGGTACATGATAAACAGACACG 59.450 47.826 0.00 0.00 32.93 4.49
2216 2371 2.359850 GACTCATTGGTGGCCGCA 60.360 61.111 19.98 0.00 0.00 5.69
2240 2395 2.878089 TTGGCTGTCTACTGCGGCA 61.878 57.895 1.29 1.29 41.04 5.69
2258 2413 2.523015 GCAGCATCTGATTTGGTTTCG 58.477 47.619 0.00 0.00 32.44 3.46
2376 2531 2.606519 CCCCCTCCGAACTCACCA 60.607 66.667 0.00 0.00 0.00 4.17
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 1.548973 CTAATCGCTAGCCCGCAACG 61.549 60.000 9.66 0.00 0.00 4.10
2 3 1.832411 GCTAATCGCTAGCCCGCAAC 61.832 60.000 9.66 0.00 46.46 4.17
3 4 1.594293 GCTAATCGCTAGCCCGCAA 60.594 57.895 9.66 0.00 46.46 4.85
4 5 2.029073 GCTAATCGCTAGCCCGCA 59.971 61.111 9.66 0.00 46.46 5.69
10 11 0.726452 GTCCGCTCGCTAATCGCTAG 60.726 60.000 0.00 0.00 38.27 3.42
11 12 1.281960 GTCCGCTCGCTAATCGCTA 59.718 57.895 0.00 0.00 38.27 4.26
12 13 2.026301 GTCCGCTCGCTAATCGCT 59.974 61.111 0.00 0.00 38.27 4.93
13 14 3.387603 CGTCCGCTCGCTAATCGC 61.388 66.667 0.00 0.00 38.27 4.58
14 15 2.004489 GTCGTCCGCTCGCTAATCG 61.004 63.158 0.00 0.00 40.15 3.34
15 16 2.004489 CGTCGTCCGCTCGCTAATC 61.004 63.158 0.00 0.00 0.00 1.75
16 17 2.024305 CGTCGTCCGCTCGCTAAT 59.976 61.111 0.00 0.00 0.00 1.73
17 18 4.170062 CCGTCGTCCGCTCGCTAA 62.170 66.667 0.00 0.00 34.38 3.09
26 27 3.499737 CAATGCCAGCCGTCGTCC 61.500 66.667 0.00 0.00 0.00 4.79
27 28 3.499737 CCAATGCCAGCCGTCGTC 61.500 66.667 0.00 0.00 0.00 4.20
32 33 3.474230 GATTCGCCAATGCCAGCCG 62.474 63.158 0.00 0.00 0.00 5.52
33 34 2.414594 GATTCGCCAATGCCAGCC 59.585 61.111 0.00 0.00 0.00 4.85
34 35 2.025156 CGATTCGCCAATGCCAGC 59.975 61.111 0.00 0.00 0.00 4.85
35 36 2.717485 CCGATTCGCCAATGCCAG 59.283 61.111 0.00 0.00 0.00 4.85
36 37 2.828095 CCCGATTCGCCAATGCCA 60.828 61.111 0.00 0.00 0.00 4.92
37 38 4.270376 GCCCGATTCGCCAATGCC 62.270 66.667 0.00 0.00 0.00 4.40
38 39 3.517140 TGCCCGATTCGCCAATGC 61.517 61.111 0.00 0.00 0.00 3.56
39 40 2.114670 AGTGCCCGATTCGCCAATG 61.115 57.895 0.00 0.00 0.00 2.82
40 41 2.114670 CAGTGCCCGATTCGCCAAT 61.115 57.895 0.00 0.00 0.00 3.16
41 42 2.745884 CAGTGCCCGATTCGCCAA 60.746 61.111 0.00 0.00 0.00 4.52
44 45 3.869272 CTGCAGTGCCCGATTCGC 61.869 66.667 13.72 0.00 0.00 4.70
45 46 3.869272 GCTGCAGTGCCCGATTCG 61.869 66.667 16.64 0.00 0.00 3.34
46 47 3.869272 CGCTGCAGTGCCCGATTC 61.869 66.667 15.44 0.00 0.00 2.52
72 73 4.845580 CAGCTACAGCCGGGCCTG 62.846 72.222 17.02 15.39 43.38 4.85
74 75 3.406595 AATCAGCTACAGCCGGGCC 62.407 63.158 17.02 0.00 43.38 5.80
75 76 2.182842 CAATCAGCTACAGCCGGGC 61.183 63.158 12.11 12.11 43.38 6.13
76 77 1.524621 CCAATCAGCTACAGCCGGG 60.525 63.158 2.18 0.00 43.38 5.73
77 78 1.524621 CCCAATCAGCTACAGCCGG 60.525 63.158 0.00 0.00 43.38 6.13
78 79 2.182842 GCCCAATCAGCTACAGCCG 61.183 63.158 0.00 0.00 43.38 5.52
79 80 1.077501 TGCCCAATCAGCTACAGCC 60.078 57.895 0.00 0.00 43.38 4.85
80 81 0.393537 AGTGCCCAATCAGCTACAGC 60.394 55.000 0.00 0.00 42.49 4.40
81 82 1.376543 CAGTGCCCAATCAGCTACAG 58.623 55.000 0.00 0.00 0.00 2.74
82 83 0.677731 GCAGTGCCCAATCAGCTACA 60.678 55.000 2.85 0.00 0.00 2.74
83 84 0.677731 TGCAGTGCCCAATCAGCTAC 60.678 55.000 13.72 0.00 0.00 3.58
84 85 0.393402 CTGCAGTGCCCAATCAGCTA 60.393 55.000 13.72 0.00 0.00 3.32
85 86 1.677966 CTGCAGTGCCCAATCAGCT 60.678 57.895 13.72 0.00 0.00 4.24
86 87 2.882876 CTGCAGTGCCCAATCAGC 59.117 61.111 13.72 0.00 0.00 4.26
87 88 2.882876 GCTGCAGTGCCCAATCAG 59.117 61.111 16.64 2.84 0.00 2.90
88 89 3.057548 CGCTGCAGTGCCCAATCA 61.058 61.111 15.44 0.00 0.00 2.57
89 90 3.818787 CCGCTGCAGTGCCCAATC 61.819 66.667 22.03 0.00 0.00 2.67
123 124 2.765807 TAGCCTCTCCCTGCCAGC 60.766 66.667 0.00 0.00 0.00 4.85
124 125 2.806009 GCTAGCCTCTCCCTGCCAG 61.806 68.421 2.29 0.00 0.00 4.85
125 126 2.765807 GCTAGCCTCTCCCTGCCA 60.766 66.667 2.29 0.00 0.00 4.92
126 127 2.370445 TTGCTAGCCTCTCCCTGCC 61.370 63.158 13.29 0.00 0.00 4.85
127 128 1.153269 GTTGCTAGCCTCTCCCTGC 60.153 63.158 13.29 0.00 0.00 4.85
128 129 1.142748 CGTTGCTAGCCTCTCCCTG 59.857 63.158 13.29 0.00 0.00 4.45
129 130 2.060980 CCGTTGCTAGCCTCTCCCT 61.061 63.158 13.29 0.00 0.00 4.20
130 131 2.501610 CCGTTGCTAGCCTCTCCC 59.498 66.667 13.29 0.00 0.00 4.30
131 132 2.501610 CCCGTTGCTAGCCTCTCC 59.498 66.667 13.29 0.00 0.00 3.71
132 133 2.202946 GCCCGTTGCTAGCCTCTC 60.203 66.667 13.29 0.00 36.87 3.20
133 134 4.148825 CGCCCGTTGCTAGCCTCT 62.149 66.667 13.29 0.00 38.05 3.69
134 135 3.952628 AACGCCCGTTGCTAGCCTC 62.953 63.158 13.29 4.18 36.91 4.70
135 136 4.016706 AACGCCCGTTGCTAGCCT 62.017 61.111 13.29 0.00 36.91 4.58
136 137 3.799755 CAACGCCCGTTGCTAGCC 61.800 66.667 18.86 0.00 46.92 3.93
179 180 3.646976 CATCCATCTGCCGCGCTG 61.647 66.667 5.56 0.00 0.00 5.18
180 181 4.923942 CCATCCATCTGCCGCGCT 62.924 66.667 5.56 0.00 0.00 5.92
183 184 4.881440 TGCCCATCCATCTGCCGC 62.881 66.667 0.00 0.00 0.00 6.53
184 185 2.903855 GTGCCCATCCATCTGCCG 60.904 66.667 0.00 0.00 0.00 5.69
185 186 2.903855 CGTGCCCATCCATCTGCC 60.904 66.667 0.00 0.00 0.00 4.85
186 187 3.589881 GCGTGCCCATCCATCTGC 61.590 66.667 0.00 0.00 0.00 4.26
187 188 2.124612 TGCGTGCCCATCCATCTG 60.125 61.111 0.00 0.00 0.00 2.90
188 189 2.124570 GTGCGTGCCCATCCATCT 60.125 61.111 0.00 0.00 0.00 2.90
189 190 3.576356 CGTGCGTGCCCATCCATC 61.576 66.667 0.00 0.00 0.00 3.51
249 250 4.139420 CTTTCGCTGCAGCCGTCG 62.139 66.667 32.07 18.44 37.91 5.12
250 251 2.738521 TCTTTCGCTGCAGCCGTC 60.739 61.111 32.07 6.03 37.91 4.79
251 252 2.154798 TAGTCTTTCGCTGCAGCCGT 62.155 55.000 32.07 12.49 37.91 5.68
252 253 1.416813 CTAGTCTTTCGCTGCAGCCG 61.417 60.000 32.07 25.33 37.91 5.52
253 254 1.086634 CCTAGTCTTTCGCTGCAGCC 61.087 60.000 32.07 17.15 37.91 4.85
254 255 1.086634 CCCTAGTCTTTCGCTGCAGC 61.087 60.000 29.12 29.12 37.78 5.25
255 256 0.460987 CCCCTAGTCTTTCGCTGCAG 60.461 60.000 10.11 10.11 0.00 4.41
256 257 1.192146 ACCCCTAGTCTTTCGCTGCA 61.192 55.000 0.00 0.00 0.00 4.41
257 258 0.822164 TACCCCTAGTCTTTCGCTGC 59.178 55.000 0.00 0.00 0.00 5.25
258 259 3.604875 TTTACCCCTAGTCTTTCGCTG 57.395 47.619 0.00 0.00 0.00 5.18
259 260 3.307269 GGTTTTACCCCTAGTCTTTCGCT 60.307 47.826 0.00 0.00 30.04 4.93
260 261 3.005554 GGTTTTACCCCTAGTCTTTCGC 58.994 50.000 0.00 0.00 30.04 4.70
261 262 4.548451 AGGTTTTACCCCTAGTCTTTCG 57.452 45.455 0.00 0.00 39.75 3.46
262 263 8.571336 GTTTTTAGGTTTTACCCCTAGTCTTTC 58.429 37.037 0.00 0.00 39.75 2.62
263 264 8.284435 AGTTTTTAGGTTTTACCCCTAGTCTTT 58.716 33.333 0.00 0.00 39.75 2.52
264 265 7.722728 CAGTTTTTAGGTTTTACCCCTAGTCTT 59.277 37.037 0.00 0.00 39.75 3.01
265 266 7.072834 TCAGTTTTTAGGTTTTACCCCTAGTCT 59.927 37.037 0.00 0.00 39.75 3.24
266 267 7.226441 TCAGTTTTTAGGTTTTACCCCTAGTC 58.774 38.462 0.00 0.00 39.75 2.59
267 268 7.152942 TCAGTTTTTAGGTTTTACCCCTAGT 57.847 36.000 0.00 0.00 39.75 2.57
268 269 9.170734 GTATCAGTTTTTAGGTTTTACCCCTAG 57.829 37.037 0.00 0.00 39.75 3.02
269 270 8.108999 GGTATCAGTTTTTAGGTTTTACCCCTA 58.891 37.037 0.00 0.00 39.75 3.53
270 271 6.950041 GGTATCAGTTTTTAGGTTTTACCCCT 59.050 38.462 0.00 0.00 39.75 4.79
271 272 6.720748 TGGTATCAGTTTTTAGGTTTTACCCC 59.279 38.462 0.00 0.00 39.75 4.95
272 273 7.764141 TGGTATCAGTTTTTAGGTTTTACCC 57.236 36.000 0.00 0.00 39.75 3.69
273 274 8.799367 ACATGGTATCAGTTTTTAGGTTTTACC 58.201 33.333 0.00 0.00 38.99 2.85
277 278 9.747898 TCATACATGGTATCAGTTTTTAGGTTT 57.252 29.630 0.00 0.00 0.00 3.27
278 279 9.920946 ATCATACATGGTATCAGTTTTTAGGTT 57.079 29.630 0.00 0.00 0.00 3.50
279 280 9.920946 AATCATACATGGTATCAGTTTTTAGGT 57.079 29.630 0.00 0.00 0.00 3.08
281 282 9.669353 GCAATCATACATGGTATCAGTTTTTAG 57.331 33.333 0.00 0.00 0.00 1.85
282 283 9.183368 TGCAATCATACATGGTATCAGTTTTTA 57.817 29.630 0.00 0.00 0.00 1.52
283 284 7.975616 GTGCAATCATACATGGTATCAGTTTTT 59.024 33.333 0.00 0.00 0.00 1.94
284 285 7.483307 GTGCAATCATACATGGTATCAGTTTT 58.517 34.615 0.00 0.00 0.00 2.43
285 286 6.238456 CGTGCAATCATACATGGTATCAGTTT 60.238 38.462 0.00 0.00 0.00 2.66
286 287 5.237127 CGTGCAATCATACATGGTATCAGTT 59.763 40.000 0.00 0.00 0.00 3.16
287 288 4.751600 CGTGCAATCATACATGGTATCAGT 59.248 41.667 0.00 0.00 0.00 3.41
288 289 4.990426 TCGTGCAATCATACATGGTATCAG 59.010 41.667 0.00 0.00 0.00 2.90
289 290 4.954875 TCGTGCAATCATACATGGTATCA 58.045 39.130 0.00 0.00 0.00 2.15
290 291 5.409520 ACATCGTGCAATCATACATGGTATC 59.590 40.000 0.00 0.00 0.00 2.24
291 292 5.179929 CACATCGTGCAATCATACATGGTAT 59.820 40.000 0.00 0.00 0.00 2.73
292 293 4.511082 CACATCGTGCAATCATACATGGTA 59.489 41.667 0.00 0.00 0.00 3.25
293 294 3.313249 CACATCGTGCAATCATACATGGT 59.687 43.478 0.00 0.00 0.00 3.55
294 295 3.313249 ACACATCGTGCAATCATACATGG 59.687 43.478 0.00 0.00 36.98 3.66
295 296 4.541085 ACACATCGTGCAATCATACATG 57.459 40.909 0.00 0.00 36.98 3.21
296 297 4.731483 GCAACACATCGTGCAATCATACAT 60.731 41.667 0.00 0.00 36.98 2.29
297 298 3.426025 GCAACACATCGTGCAATCATACA 60.426 43.478 0.00 0.00 36.98 2.29
298 299 3.100817 GCAACACATCGTGCAATCATAC 58.899 45.455 0.00 0.00 36.98 2.39
299 300 3.009026 AGCAACACATCGTGCAATCATA 58.991 40.909 0.00 0.00 36.98 2.15
300 301 1.814394 AGCAACACATCGTGCAATCAT 59.186 42.857 0.00 0.00 36.98 2.45
301 302 1.197492 GAGCAACACATCGTGCAATCA 59.803 47.619 0.00 0.00 36.98 2.57
302 303 1.466167 AGAGCAACACATCGTGCAATC 59.534 47.619 0.00 0.00 36.98 2.67
303 304 1.527034 AGAGCAACACATCGTGCAAT 58.473 45.000 0.00 0.00 36.98 3.56
304 305 1.264020 GAAGAGCAACACATCGTGCAA 59.736 47.619 0.00 0.00 36.98 4.08
305 306 0.867746 GAAGAGCAACACATCGTGCA 59.132 50.000 0.00 0.00 36.98 4.57
306 307 0.867746 TGAAGAGCAACACATCGTGC 59.132 50.000 0.00 0.00 36.98 5.34
307 308 2.726989 GCATGAAGAGCAACACATCGTG 60.727 50.000 0.00 0.00 39.75 4.35
308 309 1.466167 GCATGAAGAGCAACACATCGT 59.534 47.619 0.00 0.00 0.00 3.73
309 310 1.465777 TGCATGAAGAGCAACACATCG 59.534 47.619 0.00 0.00 39.39 3.84
310 311 3.435566 CATGCATGAAGAGCAACACATC 58.564 45.455 22.59 0.00 46.27 3.06
311 312 2.165641 CCATGCATGAAGAGCAACACAT 59.834 45.455 28.31 0.00 46.27 3.21
312 313 1.542472 CCATGCATGAAGAGCAACACA 59.458 47.619 28.31 0.00 46.27 3.72
313 314 1.814394 TCCATGCATGAAGAGCAACAC 59.186 47.619 28.31 0.00 46.27 3.32
314 315 1.814394 GTCCATGCATGAAGAGCAACA 59.186 47.619 28.31 0.00 46.27 3.33
315 316 1.814394 TGTCCATGCATGAAGAGCAAC 59.186 47.619 28.31 13.16 46.27 4.17
316 317 1.814394 GTGTCCATGCATGAAGAGCAA 59.186 47.619 28.31 3.90 46.27 3.91
318 319 1.131883 GTGTGTCCATGCATGAAGAGC 59.868 52.381 28.31 13.49 0.00 4.09
319 320 2.161012 GTGTGTGTCCATGCATGAAGAG 59.839 50.000 28.31 11.20 0.00 2.85
320 321 2.153645 GTGTGTGTCCATGCATGAAGA 58.846 47.619 28.31 14.60 0.00 2.87
321 322 1.881324 TGTGTGTGTCCATGCATGAAG 59.119 47.619 28.31 12.34 0.00 3.02
322 323 1.978454 TGTGTGTGTCCATGCATGAA 58.022 45.000 28.31 4.34 0.00 2.57
323 324 2.203470 ATGTGTGTGTCCATGCATGA 57.797 45.000 28.31 11.26 0.00 3.07
324 325 5.952526 ATATATGTGTGTGTCCATGCATG 57.047 39.130 20.19 20.19 0.00 4.06
347 348 9.537852 TCCGTGACCTACCTTTGTATATTATAT 57.462 33.333 0.00 0.00 0.00 0.86
348 349 8.796475 GTCCGTGACCTACCTTTGTATATTATA 58.204 37.037 0.00 0.00 0.00 0.98
349 350 7.664758 GTCCGTGACCTACCTTTGTATATTAT 58.335 38.462 0.00 0.00 0.00 1.28
350 351 7.042797 GTCCGTGACCTACCTTTGTATATTA 57.957 40.000 0.00 0.00 0.00 0.98
351 352 5.910614 GTCCGTGACCTACCTTTGTATATT 58.089 41.667 0.00 0.00 0.00 1.28
352 353 5.526506 GTCCGTGACCTACCTTTGTATAT 57.473 43.478 0.00 0.00 0.00 0.86
353 354 4.989279 GTCCGTGACCTACCTTTGTATA 57.011 45.455 0.00 0.00 0.00 1.47
354 355 3.881937 GTCCGTGACCTACCTTTGTAT 57.118 47.619 0.00 0.00 0.00 2.29
366 367 7.656707 TTTTTGTATAGTTAAGGTCCGTGAC 57.343 36.000 0.00 0.00 0.00 3.67
387 388 5.934043 GCATTGGGCTTGTCTTCTAATTTTT 59.066 36.000 0.00 0.00 40.25 1.94
388 389 5.011943 TGCATTGGGCTTGTCTTCTAATTTT 59.988 36.000 0.00 0.00 45.15 1.82
389 390 4.527816 TGCATTGGGCTTGTCTTCTAATTT 59.472 37.500 0.00 0.00 45.15 1.82
390 391 4.082026 GTGCATTGGGCTTGTCTTCTAATT 60.082 41.667 0.00 0.00 45.15 1.40
391 392 3.445096 GTGCATTGGGCTTGTCTTCTAAT 59.555 43.478 0.00 0.00 45.15 1.73
392 393 2.819608 GTGCATTGGGCTTGTCTTCTAA 59.180 45.455 0.00 0.00 45.15 2.10
393 394 2.224744 TGTGCATTGGGCTTGTCTTCTA 60.225 45.455 0.00 0.00 45.15 2.10
394 395 1.251251 GTGCATTGGGCTTGTCTTCT 58.749 50.000 0.00 0.00 45.15 2.85
395 396 0.961019 TGTGCATTGGGCTTGTCTTC 59.039 50.000 0.00 0.00 45.15 2.87
396 397 1.636148 ATGTGCATTGGGCTTGTCTT 58.364 45.000 0.00 0.00 45.15 3.01
397 398 2.512692 TATGTGCATTGGGCTTGTCT 57.487 45.000 0.00 0.00 45.15 3.41
398 399 3.806625 ATTATGTGCATTGGGCTTGTC 57.193 42.857 0.00 0.00 45.15 3.18
399 400 4.022603 TGTATTATGTGCATTGGGCTTGT 58.977 39.130 0.00 0.00 45.15 3.16
400 401 4.652421 TGTATTATGTGCATTGGGCTTG 57.348 40.909 0.00 0.00 45.15 4.01
401 402 7.890127 AGTATATGTATTATGTGCATTGGGCTT 59.110 33.333 0.00 0.00 45.15 4.35
402 403 7.405292 AGTATATGTATTATGTGCATTGGGCT 58.595 34.615 0.00 0.00 45.15 5.19
403 404 7.336679 TGAGTATATGTATTATGTGCATTGGGC 59.663 37.037 0.00 0.00 45.13 5.36
404 405 8.791327 TGAGTATATGTATTATGTGCATTGGG 57.209 34.615 0.00 0.00 34.75 4.12
417 418 9.698309 GCTGTTGATAGTGTTGAGTATATGTAT 57.302 33.333 0.00 0.00 0.00 2.29
418 419 7.860872 CGCTGTTGATAGTGTTGAGTATATGTA 59.139 37.037 0.00 0.00 0.00 2.29
419 420 6.697455 CGCTGTTGATAGTGTTGAGTATATGT 59.303 38.462 0.00 0.00 0.00 2.29
420 421 6.346120 GCGCTGTTGATAGTGTTGAGTATATG 60.346 42.308 0.00 0.00 0.00 1.78
421 422 5.692204 GCGCTGTTGATAGTGTTGAGTATAT 59.308 40.000 0.00 0.00 0.00 0.86
422 423 5.041287 GCGCTGTTGATAGTGTTGAGTATA 58.959 41.667 0.00 0.00 0.00 1.47
423 424 3.865745 GCGCTGTTGATAGTGTTGAGTAT 59.134 43.478 0.00 0.00 0.00 2.12
424 425 3.250744 GCGCTGTTGATAGTGTTGAGTA 58.749 45.455 0.00 0.00 0.00 2.59
425 426 2.069273 GCGCTGTTGATAGTGTTGAGT 58.931 47.619 0.00 0.00 0.00 3.41
426 427 2.068519 TGCGCTGTTGATAGTGTTGAG 58.931 47.619 9.73 0.00 0.00 3.02
427 428 2.162319 TGCGCTGTTGATAGTGTTGA 57.838 45.000 9.73 0.00 0.00 3.18
428 429 2.777494 CATGCGCTGTTGATAGTGTTG 58.223 47.619 9.73 0.00 0.00 3.33
429 430 1.131126 GCATGCGCTGTTGATAGTGTT 59.869 47.619 9.73 0.00 34.30 3.32
430 431 0.729116 GCATGCGCTGTTGATAGTGT 59.271 50.000 9.73 0.00 34.30 3.55
431 432 3.521534 GCATGCGCTGTTGATAGTG 57.478 52.632 9.73 0.00 34.30 2.74
442 443 4.563976 AGATAATGTTTTGAAAGCATGCGC 59.436 37.500 13.01 0.00 38.99 6.09
443 444 6.454583 CCAAGATAATGTTTTGAAAGCATGCG 60.455 38.462 13.01 0.00 0.00 4.73
444 445 6.591062 TCCAAGATAATGTTTTGAAAGCATGC 59.409 34.615 10.51 10.51 0.00 4.06
445 446 8.600625 CATCCAAGATAATGTTTTGAAAGCATG 58.399 33.333 8.01 0.00 0.00 4.06
446 447 8.533657 TCATCCAAGATAATGTTTTGAAAGCAT 58.466 29.630 1.21 1.21 0.00 3.79
447 448 7.894708 TCATCCAAGATAATGTTTTGAAAGCA 58.105 30.769 0.00 0.00 0.00 3.91
448 449 7.009907 GCTCATCCAAGATAATGTTTTGAAAGC 59.990 37.037 0.00 0.00 0.00 3.51
449 450 8.248945 AGCTCATCCAAGATAATGTTTTGAAAG 58.751 33.333 0.00 0.00 0.00 2.62
450 451 8.125978 AGCTCATCCAAGATAATGTTTTGAAA 57.874 30.769 0.00 0.00 0.00 2.69
451 452 7.707624 AGCTCATCCAAGATAATGTTTTGAA 57.292 32.000 0.00 0.00 0.00 2.69
452 453 7.707624 AAGCTCATCCAAGATAATGTTTTGA 57.292 32.000 0.00 0.00 0.00 2.69
462 463 8.810041 ACAAAGAAAAATAAGCTCATCCAAGAT 58.190 29.630 0.00 0.00 0.00 2.40
463 464 8.181904 ACAAAGAAAAATAAGCTCATCCAAGA 57.818 30.769 0.00 0.00 0.00 3.02
464 465 8.822652 AACAAAGAAAAATAAGCTCATCCAAG 57.177 30.769 0.00 0.00 0.00 3.61
465 466 9.612066 AAAACAAAGAAAAATAAGCTCATCCAA 57.388 25.926 0.00 0.00 0.00 3.53
466 467 9.260002 GAAAACAAAGAAAAATAAGCTCATCCA 57.740 29.630 0.00 0.00 0.00 3.41
467 468 8.427774 CGAAAACAAAGAAAAATAAGCTCATCC 58.572 33.333 0.00 0.00 0.00 3.51
468 469 7.946768 GCGAAAACAAAGAAAAATAAGCTCATC 59.053 33.333 0.00 0.00 0.00 2.92
469 470 7.653311 AGCGAAAACAAAGAAAAATAAGCTCAT 59.347 29.630 0.00 0.00 0.00 2.90
470 471 6.978080 AGCGAAAACAAAGAAAAATAAGCTCA 59.022 30.769 0.00 0.00 0.00 4.26
471 472 7.394870 AGCGAAAACAAAGAAAAATAAGCTC 57.605 32.000 0.00 0.00 0.00 4.09
472 473 8.349983 TCTAGCGAAAACAAAGAAAAATAAGCT 58.650 29.630 0.00 0.00 0.00 3.74
473 474 8.502161 TCTAGCGAAAACAAAGAAAAATAAGC 57.498 30.769 0.00 0.00 0.00 3.09
474 475 9.118236 CCTCTAGCGAAAACAAAGAAAAATAAG 57.882 33.333 0.00 0.00 0.00 1.73
475 476 8.842280 TCCTCTAGCGAAAACAAAGAAAAATAA 58.158 29.630 0.00 0.00 0.00 1.40
476 477 8.385898 TCCTCTAGCGAAAACAAAGAAAAATA 57.614 30.769 0.00 0.00 0.00 1.40
477 478 7.272037 TCCTCTAGCGAAAACAAAGAAAAAT 57.728 32.000 0.00 0.00 0.00 1.82
478 479 6.687081 TCCTCTAGCGAAAACAAAGAAAAA 57.313 33.333 0.00 0.00 0.00 1.94
479 480 6.877611 ATCCTCTAGCGAAAACAAAGAAAA 57.122 33.333 0.00 0.00 0.00 2.29
480 481 7.331193 GTCTATCCTCTAGCGAAAACAAAGAAA 59.669 37.037 0.00 0.00 0.00 2.52
481 482 6.812160 GTCTATCCTCTAGCGAAAACAAAGAA 59.188 38.462 0.00 0.00 0.00 2.52
482 483 6.071560 TGTCTATCCTCTAGCGAAAACAAAGA 60.072 38.462 0.00 0.00 0.00 2.52
483 484 6.035112 GTGTCTATCCTCTAGCGAAAACAAAG 59.965 42.308 0.00 0.00 0.00 2.77
484 485 5.867716 GTGTCTATCCTCTAGCGAAAACAAA 59.132 40.000 0.00 0.00 0.00 2.83
485 486 5.047590 TGTGTCTATCCTCTAGCGAAAACAA 60.048 40.000 0.00 0.00 0.00 2.83
486 487 4.461431 TGTGTCTATCCTCTAGCGAAAACA 59.539 41.667 0.00 0.00 0.00 2.83
487 488 4.995124 TGTGTCTATCCTCTAGCGAAAAC 58.005 43.478 0.00 0.00 0.00 2.43
488 489 5.854010 ATGTGTCTATCCTCTAGCGAAAA 57.146 39.130 0.00 0.00 0.00 2.29
489 490 6.062749 ACTATGTGTCTATCCTCTAGCGAAA 58.937 40.000 0.00 0.00 0.00 3.46
490 491 5.622180 ACTATGTGTCTATCCTCTAGCGAA 58.378 41.667 0.00 0.00 0.00 4.70
491 492 5.230323 ACTATGTGTCTATCCTCTAGCGA 57.770 43.478 0.00 0.00 0.00 4.93
492 493 5.694816 CAACTATGTGTCTATCCTCTAGCG 58.305 45.833 0.00 0.00 0.00 4.26
493 494 5.242838 AGCAACTATGTGTCTATCCTCTAGC 59.757 44.000 0.00 0.00 0.00 3.42
494 495 6.892658 AGCAACTATGTGTCTATCCTCTAG 57.107 41.667 0.00 0.00 0.00 2.43
495 496 7.519057 ACTAGCAACTATGTGTCTATCCTCTA 58.481 38.462 0.00 0.00 0.00 2.43
496 497 6.369629 ACTAGCAACTATGTGTCTATCCTCT 58.630 40.000 0.00 0.00 0.00 3.69
497 498 6.642707 ACTAGCAACTATGTGTCTATCCTC 57.357 41.667 0.00 0.00 0.00 3.71
498 499 7.425224 AAACTAGCAACTATGTGTCTATCCT 57.575 36.000 0.00 0.00 0.00 3.24
499 500 9.765795 AATAAACTAGCAACTATGTGTCTATCC 57.234 33.333 0.00 0.00 0.00 2.59
509 510 9.749340 ACCACCTTAAAATAAACTAGCAACTAT 57.251 29.630 0.00 0.00 0.00 2.12
511 512 9.577222 TTACCACCTTAAAATAAACTAGCAACT 57.423 29.630 0.00 0.00 0.00 3.16
521 522 9.482627 CAGCAATGTTTTACCACCTTAAAATAA 57.517 29.630 0.00 0.00 34.32 1.40
522 523 8.091449 CCAGCAATGTTTTACCACCTTAAAATA 58.909 33.333 0.00 0.00 34.32 1.40
523 524 6.934083 CCAGCAATGTTTTACCACCTTAAAAT 59.066 34.615 0.00 0.00 34.32 1.82
524 525 6.127026 ACCAGCAATGTTTTACCACCTTAAAA 60.127 34.615 0.00 0.00 0.00 1.52
525 526 5.364157 ACCAGCAATGTTTTACCACCTTAAA 59.636 36.000 0.00 0.00 0.00 1.52
526 527 4.896482 ACCAGCAATGTTTTACCACCTTAA 59.104 37.500 0.00 0.00 0.00 1.85
527 528 4.475345 ACCAGCAATGTTTTACCACCTTA 58.525 39.130 0.00 0.00 0.00 2.69
528 529 3.304829 ACCAGCAATGTTTTACCACCTT 58.695 40.909 0.00 0.00 0.00 3.50
529 530 2.957474 ACCAGCAATGTTTTACCACCT 58.043 42.857 0.00 0.00 0.00 4.00
530 531 3.744238 AACCAGCAATGTTTTACCACC 57.256 42.857 0.00 0.00 0.00 4.61
531 532 4.055360 GGAAACCAGCAATGTTTTACCAC 58.945 43.478 0.73 0.00 36.13 4.16
532 533 3.964031 AGGAAACCAGCAATGTTTTACCA 59.036 39.130 0.00 0.00 36.13 3.25
533 534 4.038642 TGAGGAAACCAGCAATGTTTTACC 59.961 41.667 0.00 0.00 36.13 2.85
534 535 5.195001 TGAGGAAACCAGCAATGTTTTAC 57.805 39.130 0.00 0.00 36.13 2.01
552 553 0.463204 ACGTGGATGAGATGCTGAGG 59.537 55.000 0.00 0.00 0.00 3.86
576 577 2.251642 GGGTGCGCGAAAACAGAGT 61.252 57.895 12.10 0.00 0.00 3.24
611 612 1.361993 GCCTGCTGATCGATCGAGT 59.638 57.895 23.84 11.52 0.00 4.18
765 770 1.156645 GGCGATGTGATCCACTCTGC 61.157 60.000 0.00 0.00 35.11 4.26
800 805 2.283298 TCTTTCGAGCAATCATCAGGC 58.717 47.619 0.00 0.00 0.00 4.85
801 806 6.037500 TGTTTATCTTTCGAGCAATCATCAGG 59.962 38.462 0.00 0.00 0.00 3.86
802 807 6.904011 GTGTTTATCTTTCGAGCAATCATCAG 59.096 38.462 0.00 0.00 0.00 2.90
811 816 3.938963 TGGGATGTGTTTATCTTTCGAGC 59.061 43.478 0.00 0.00 0.00 5.03
813 818 5.123227 GGATGGGATGTGTTTATCTTTCGA 58.877 41.667 0.00 0.00 0.00 3.71
852 857 3.643320 TCTCCGCATCAGTATGGAAGATT 59.357 43.478 0.00 0.00 36.16 2.40
875 892 0.460284 AGTCAACGGCCGCTAATCAG 60.460 55.000 28.58 7.39 0.00 2.90
876 893 0.036765 AAGTCAACGGCCGCTAATCA 60.037 50.000 28.58 0.00 0.00 2.57
880 897 2.322081 GCAAAGTCAACGGCCGCTA 61.322 57.895 28.58 8.02 0.00 4.26
922 939 3.805891 GATGAGCTGAGCCGAGCCC 62.806 68.421 0.00 0.00 40.08 5.19
923 940 2.280052 GATGAGCTGAGCCGAGCC 60.280 66.667 0.00 0.00 40.08 4.70
924 941 1.300080 GAGATGAGCTGAGCCGAGC 60.300 63.158 0.00 0.00 39.46 5.03
925 942 1.008652 CGAGATGAGCTGAGCCGAG 60.009 63.158 0.00 0.00 0.00 4.63
926 943 3.114650 CGAGATGAGCTGAGCCGA 58.885 61.111 0.00 0.00 0.00 5.54
951 968 3.827898 CCGTCCTCGCCCAGACTC 61.828 72.222 0.00 0.00 35.54 3.36
952 969 4.361971 TCCGTCCTCGCCCAGACT 62.362 66.667 0.00 0.00 35.54 3.24
1043 1072 0.877071 GTAGGCAATGGCGATGATGG 59.123 55.000 0.00 0.00 42.47 3.51
1162 1191 4.227134 CTCGTCCATCCCCGCCTG 62.227 72.222 0.00 0.00 0.00 4.85
1230 1259 3.735029 GTGGACGACGAGGACGCT 61.735 66.667 0.00 0.00 43.96 5.07
1419 1469 2.966050 AGAAGAGATCACGTTTGGCTC 58.034 47.619 0.00 0.00 0.00 4.70
1433 1483 8.240682 TCTCGAGAGTTTCAGAATAAAGAAGAG 58.759 37.037 12.08 0.00 0.00 2.85
1435 1485 8.806634 CATCTCGAGAGTTTCAGAATAAAGAAG 58.193 37.037 21.52 0.00 0.00 2.85
1438 1488 9.574458 TTACATCTCGAGAGTTTCAGAATAAAG 57.426 33.333 21.52 0.00 0.00 1.85
1442 1499 6.533367 GCTTTACATCTCGAGAGTTTCAGAAT 59.467 38.462 21.52 0.00 0.00 2.40
1499 1556 5.878116 TCTGGATACCCACGAAAAGTATTTG 59.122 40.000 0.00 0.00 36.36 2.32
1500 1557 6.057321 TCTGGATACCCACGAAAAGTATTT 57.943 37.500 0.00 0.00 37.46 1.40
1503 1560 5.486735 TTTCTGGATACCCACGAAAAGTA 57.513 39.130 0.00 0.00 37.01 2.24
1504 1561 4.360951 TTTCTGGATACCCACGAAAAGT 57.639 40.909 0.00 0.00 37.01 2.66
1505 1562 5.447279 CGATTTTCTGGATACCCACGAAAAG 60.447 44.000 14.81 4.04 43.81 2.27
1547 1605 1.135315 CGCCCTCATCACCAAAACATG 60.135 52.381 0.00 0.00 0.00 3.21
1614 1673 0.452987 CATGGTTTGGAGATGTGCCG 59.547 55.000 0.00 0.00 0.00 5.69
1633 1692 8.401709 GGTGTGTATGTAGTTAAGTAGGAGTAC 58.598 40.741 0.00 0.00 0.00 2.73
1691 1837 7.332430 TGAATTCTTTCAAGCTGCCAATATTTG 59.668 33.333 7.05 0.00 38.90 2.32
1695 1841 5.981088 TGAATTCTTTCAAGCTGCCAATA 57.019 34.783 7.05 0.00 38.90 1.90
1725 1871 1.800805 ACAGTTCGTTCATCAGGCAG 58.199 50.000 0.00 0.00 0.00 4.85
1797 1943 6.215636 AGACCTGAAATACCCTCTGTATGTTT 59.784 38.462 0.00 0.00 40.11 2.83
1862 2011 6.759827 ACATATATACCGTTGTCTGTTTGTCC 59.240 38.462 0.00 0.00 0.00 4.02
1979 2133 9.226345 GCTCTGCATTTAGTTACATTTTGTATC 57.774 33.333 0.00 0.00 32.20 2.24
2216 2371 0.687354 CAGTAGACAGCCAACCTGGT 59.313 55.000 0.00 0.00 46.14 4.00
2240 2395 3.071874 TCCGAAACCAAATCAGATGCT 57.928 42.857 0.00 0.00 0.00 3.79
2258 2413 1.524002 TGCTCCTGCTGCAGTATCC 59.476 57.895 26.41 12.98 40.48 2.59
2391 2546 2.104170 GAGTTCGGAGGAGGTGAAGAT 58.896 52.381 0.00 0.00 0.00 2.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.