Multiple sequence alignment - TraesCS4D01G355400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G355400 chr4D 100.000 2291 0 0 1 2291 504520809 504523099 0.000000e+00 4231.0
1 TraesCS4D01G355400 chr4D 87.059 765 89 3 16 776 508341508 508342266 0.000000e+00 856.0
2 TraesCS4D01G355400 chr5A 90.360 778 70 2 1 776 694536234 694537008 0.000000e+00 1016.0
3 TraesCS4D01G355400 chr5A 90.103 778 72 2 1 776 694578170 694578944 0.000000e+00 1005.0
4 TraesCS4D01G355400 chr5A 89.846 778 74 2 1 776 694556639 694557413 0.000000e+00 994.0
5 TraesCS4D01G355400 chr5A 89.651 744 76 1 776 1519 694557468 694558210 0.000000e+00 946.0
6 TraesCS4D01G355400 chr5A 89.623 742 76 1 776 1517 694578999 694579739 0.000000e+00 942.0
7 TraesCS4D01G355400 chr5A 89.247 744 79 1 776 1519 694537063 694537805 0.000000e+00 929.0
8 TraesCS4D01G355400 chr5A 86.162 766 96 3 15 776 704370448 704371207 0.000000e+00 819.0
9 TraesCS4D01G355400 chr5A 84.226 691 92 7 25 704 704452421 704453105 0.000000e+00 656.0
10 TraesCS4D01G355400 chr4B 88.642 766 76 7 16 776 659483441 659482682 0.000000e+00 922.0
11 TraesCS4D01G355400 chr4B 88.381 766 78 7 16 776 659498975 659498216 0.000000e+00 911.0
12 TraesCS4D01G355400 chr4B 89.501 381 35 5 983 1362 659497978 659497602 5.730000e-131 477.0
13 TraesCS4D01G355400 chr4B 88.714 381 39 4 983 1362 659482461 659482084 1.600000e-126 462.0
14 TraesCS4D01G355400 chr4B 100.000 32 0 0 1953 1984 37140457 37140426 2.460000e-05 60.2
15 TraesCS4D01G355400 chrUn 88.512 766 77 7 16 776 264519824 264520583 0.000000e+00 917.0
16 TraesCS4D01G355400 chrUn 88.802 384 39 4 980 1362 264520823 264521203 3.450000e-128 468.0
17 TraesCS4D01G355400 chrUn 94.286 35 2 0 1950 1984 62669973 62670007 1.000000e-03 54.7
18 TraesCS4D01G355400 chr2A 76.684 193 43 2 446 637 751239234 751239425 3.110000e-19 106.0
19 TraesCS4D01G355400 chr1B 78.505 107 23 0 2169 2275 38836279 38836173 1.140000e-08 71.3
20 TraesCS4D01G355400 chr3B 100.000 32 0 0 1953 1984 672863142 672863111 2.460000e-05 60.2
21 TraesCS4D01G355400 chr3B 96.875 32 1 0 1953 1984 145299973 145299942 1.000000e-03 54.7
22 TraesCS4D01G355400 chr7D 94.444 36 2 0 1949 1984 37931374 37931409 3.180000e-04 56.5
23 TraesCS4D01G355400 chr7A 94.444 36 2 0 1949 1984 78416325 78416360 3.180000e-04 56.5
24 TraesCS4D01G355400 chr2B 92.500 40 1 2 1947 1984 585159127 585159166 3.180000e-04 56.5
25 TraesCS4D01G355400 chr5B 88.889 45 4 1 1941 1984 315640730 315640774 1.000000e-03 54.7
26 TraesCS4D01G355400 chr2D 96.875 32 1 0 1953 1984 249882074 249882105 1.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G355400 chr4D 504520809 504523099 2290 False 4231.0 4231 100.0000 1 2291 1 chr4D.!!$F1 2290
1 TraesCS4D01G355400 chr4D 508341508 508342266 758 False 856.0 856 87.0590 16 776 1 chr4D.!!$F2 760
2 TraesCS4D01G355400 chr5A 694578170 694579739 1569 False 973.5 1005 89.8630 1 1517 2 chr5A.!!$F5 1516
3 TraesCS4D01G355400 chr5A 694536234 694537805 1571 False 972.5 1016 89.8035 1 1519 2 chr5A.!!$F3 1518
4 TraesCS4D01G355400 chr5A 694556639 694558210 1571 False 970.0 994 89.7485 1 1519 2 chr5A.!!$F4 1518
5 TraesCS4D01G355400 chr5A 704370448 704371207 759 False 819.0 819 86.1620 15 776 1 chr5A.!!$F1 761
6 TraesCS4D01G355400 chr5A 704452421 704453105 684 False 656.0 656 84.2260 25 704 1 chr5A.!!$F2 679
7 TraesCS4D01G355400 chr4B 659497602 659498975 1373 True 694.0 911 88.9410 16 1362 2 chr4B.!!$R3 1346
8 TraesCS4D01G355400 chr4B 659482084 659483441 1357 True 692.0 922 88.6780 16 1362 2 chr4B.!!$R2 1346
9 TraesCS4D01G355400 chrUn 264519824 264521203 1379 False 692.5 917 88.6570 16 1362 2 chrUn.!!$F2 1346


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
902 980 1.211457 CAGAGGCTGCAGGTTATCCTT 59.789 52.381 17.12 1.62 43.07 3.36 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2176 2263 0.035317 TTGCATCTCCACAACTCGCT 59.965 50.0 0.0 0.0 0.0 4.93 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
100 109 2.076863 CCTCATGTTTCAGGGAACGTC 58.923 52.381 0.00 0.00 32.18 4.34
101 110 2.549992 CCTCATGTTTCAGGGAACGTCA 60.550 50.000 0.00 0.00 32.18 4.35
152 161 1.867233 CTTCGTGTTGGTTCTGTCCAG 59.133 52.381 0.00 0.00 38.80 3.86
248 257 4.213694 GGCTGCAGTATTCATGAAGATGAG 59.786 45.833 16.64 11.35 39.81 2.90
263 272 9.286946 CATGAAGATGAGAAGCTTTTGATTTAC 57.713 33.333 0.00 0.00 0.00 2.01
280 289 7.658525 TGATTTACGAATACCTACCTAACCA 57.341 36.000 0.00 0.00 0.00 3.67
328 339 3.887716 AGTACGTTCTACTCACCTGTTGT 59.112 43.478 0.00 0.00 0.00 3.32
329 341 3.093717 ACGTTCTACTCACCTGTTGTG 57.906 47.619 0.00 0.00 46.88 3.33
366 381 4.154918 GGGTCAAACATCACTGACAAGATC 59.845 45.833 4.74 0.00 43.11 2.75
390 405 9.736414 ATCATTTATCTAATTCTGTCCCTGATG 57.264 33.333 0.00 0.00 0.00 3.07
435 450 7.775053 ACTCAATTAGCCCACAAGATTTAAA 57.225 32.000 0.00 0.00 0.00 1.52
462 477 3.158676 CACTGGTATAGCTAGGGGACTC 58.841 54.545 0.00 0.00 43.67 3.36
477 492 3.049344 GGGACTCCTTTATCTCCACCAT 58.951 50.000 0.00 0.00 0.00 3.55
485 500 5.193527 TCCTTTATCTCCACCATGATTCCAA 59.806 40.000 0.00 0.00 0.00 3.53
557 572 7.284034 GGATACTGATATGAGCCCCAAAATATG 59.716 40.741 0.00 0.00 0.00 1.78
613 635 5.255397 TGAACAGGAAGGACATACCAATT 57.745 39.130 0.00 0.00 42.04 2.32
647 669 7.103641 GGAACATTGTGAGTAGTGAGGAATTA 58.896 38.462 0.00 0.00 0.00 1.40
650 672 7.450074 ACATTGTGAGTAGTGAGGAATTACAA 58.550 34.615 0.00 0.00 0.00 2.41
654 676 8.997621 TGTGAGTAGTGAGGAATTACAATTAC 57.002 34.615 0.00 0.00 0.00 1.89
679 701 4.082190 GGATCCCTTAACTTTTGTGCTTCC 60.082 45.833 0.00 0.00 0.00 3.46
722 744 9.838339 AAATTTACCATGGTTAATTGTCAAACA 57.162 25.926 31.93 6.81 37.40 2.83
814 891 1.785951 CTCACGTGCATGCACTCAG 59.214 57.895 39.46 29.66 44.16 3.35
902 980 1.211457 CAGAGGCTGCAGGTTATCCTT 59.789 52.381 17.12 1.62 43.07 3.36
910 988 4.460731 GCTGCAGGTTATCCTTCTTTTCTT 59.539 41.667 17.12 0.00 43.07 2.52
911 989 5.392487 GCTGCAGGTTATCCTTCTTTTCTTC 60.392 44.000 17.12 0.00 43.07 2.87
948 1030 8.675705 TTCAGTCATCAGAATTTGTTCAACTA 57.324 30.769 0.00 0.00 0.00 2.24
1050 1132 4.991687 GGGAAAGTGATGGATCTAATCGAC 59.008 45.833 0.00 0.00 0.00 4.20
1063 1145 7.831193 TGGATCTAATCGACTCATCTATCATCA 59.169 37.037 0.00 0.00 0.00 3.07
1087 1169 2.139118 GTTGCTCTCTCGTTGAAGCTT 58.861 47.619 0.00 0.00 0.00 3.74
1134 1216 1.918253 GGTGCAGGATGACCCAGAT 59.082 57.895 0.00 0.00 39.69 2.90
1139 1221 0.835276 CAGGATGACCCAGATGCTCA 59.165 55.000 0.00 0.00 39.69 4.26
1189 1271 4.680708 GCCTGGATAACGAAGACATTGAGA 60.681 45.833 0.00 0.00 0.00 3.27
1194 1276 3.981071 AACGAAGACATTGAGATCCCA 57.019 42.857 0.00 0.00 0.00 4.37
1197 1279 3.007940 ACGAAGACATTGAGATCCCACAA 59.992 43.478 0.00 0.00 0.00 3.33
1234 1316 1.868498 GCTTTGCACACCGTAACTACA 59.132 47.619 0.00 0.00 0.00 2.74
1240 1322 1.271379 CACACCGTAACTACAGAGCCA 59.729 52.381 0.00 0.00 0.00 4.75
1242 1324 0.531200 ACCGTAACTACAGAGCCAGC 59.469 55.000 0.00 0.00 0.00 4.85
1283 1365 1.002087 GAGCCTCGAAAACCTCAAGGA 59.998 52.381 2.30 0.00 38.94 3.36
1296 1378 2.996621 CCTCAAGGAGTGCTAGAAAACG 59.003 50.000 0.00 0.00 37.39 3.60
1304 1386 3.994392 GAGTGCTAGAAAACGATTGGTCA 59.006 43.478 0.00 0.00 0.00 4.02
1362 1449 5.450137 GCGTACCTGCTCAGTTCTATTCTAA 60.450 44.000 0.00 0.00 0.00 2.10
1363 1450 6.202937 CGTACCTGCTCAGTTCTATTCTAAG 58.797 44.000 0.00 0.00 0.00 2.18
1364 1451 6.183360 CGTACCTGCTCAGTTCTATTCTAAGT 60.183 42.308 0.00 0.00 0.00 2.24
1371 1458 7.044798 GCTCAGTTCTATTCTAAGTTGGATGT 58.955 38.462 0.00 0.00 0.00 3.06
1384 1471 1.293498 GGATGTGCTCTGTCACCGT 59.707 57.895 0.00 0.00 36.17 4.83
1401 1488 5.236478 GTCACCGTCAGGATTGTAATTATGG 59.764 44.000 0.00 0.00 41.02 2.74
1451 1538 6.631016 TCTAATGTGTAATATCATCCGGAGC 58.369 40.000 11.34 0.00 0.00 4.70
1459 1546 7.819900 GTGTAATATCATCCGGAGCTCTTTTAT 59.180 37.037 14.64 3.21 0.00 1.40
1460 1547 7.819415 TGTAATATCATCCGGAGCTCTTTTATG 59.181 37.037 14.64 12.12 0.00 1.90
1467 1554 2.684881 CGGAGCTCTTTTATGGTGCATT 59.315 45.455 14.64 0.00 0.00 3.56
1472 1559 7.267857 GGAGCTCTTTTATGGTGCATTTAAAT 58.732 34.615 14.64 0.00 0.00 1.40
1473 1560 7.223387 GGAGCTCTTTTATGGTGCATTTAAATG 59.777 37.037 21.54 21.54 39.40 2.32
1483 1570 4.584325 GGTGCATTTAAATGATAGGAGCCA 59.416 41.667 28.33 13.05 38.70 4.75
1494 1581 5.128033 TGATAGGAGCCATTCATTTCCAA 57.872 39.130 0.00 0.00 32.02 3.53
1500 1587 5.427481 AGGAGCCATTCATTTCCAATCATTT 59.573 36.000 0.00 0.00 32.02 2.32
1501 1588 5.526111 GGAGCCATTCATTTCCAATCATTTG 59.474 40.000 0.00 0.00 0.00 2.32
1567 1654 7.608308 AGACATTATGTTTTCTTCTCTCTGC 57.392 36.000 0.00 0.00 0.00 4.26
1568 1655 7.393216 AGACATTATGTTTTCTTCTCTCTGCT 58.607 34.615 0.00 0.00 0.00 4.24
1569 1656 7.548780 AGACATTATGTTTTCTTCTCTCTGCTC 59.451 37.037 0.00 0.00 0.00 4.26
1570 1657 6.312426 ACATTATGTTTTCTTCTCTCTGCTCG 59.688 38.462 0.00 0.00 0.00 5.03
1571 1658 4.527509 ATGTTTTCTTCTCTCTGCTCGA 57.472 40.909 0.00 0.00 0.00 4.04
1572 1659 4.322080 TGTTTTCTTCTCTCTGCTCGAA 57.678 40.909 0.00 0.00 0.00 3.71
1573 1660 4.887748 TGTTTTCTTCTCTCTGCTCGAAT 58.112 39.130 0.00 0.00 0.00 3.34
1574 1661 4.687948 TGTTTTCTTCTCTCTGCTCGAATG 59.312 41.667 0.00 0.00 0.00 2.67
1575 1662 4.527509 TTTCTTCTCTCTGCTCGAATGT 57.472 40.909 0.00 0.00 0.00 2.71
1576 1663 3.500558 TCTTCTCTCTGCTCGAATGTG 57.499 47.619 0.00 0.00 0.00 3.21
1577 1664 3.084786 TCTTCTCTCTGCTCGAATGTGA 58.915 45.455 0.00 0.00 0.00 3.58
1578 1665 3.698539 TCTTCTCTCTGCTCGAATGTGAT 59.301 43.478 0.00 0.00 0.00 3.06
1579 1666 4.884164 TCTTCTCTCTGCTCGAATGTGATA 59.116 41.667 0.00 0.00 0.00 2.15
1580 1667 5.534278 TCTTCTCTCTGCTCGAATGTGATAT 59.466 40.000 0.00 0.00 0.00 1.63
1581 1668 5.369685 TCTCTCTGCTCGAATGTGATATC 57.630 43.478 0.00 0.00 0.00 1.63
1582 1669 4.217334 TCTCTCTGCTCGAATGTGATATCC 59.783 45.833 0.00 0.00 0.00 2.59
1583 1670 4.148079 TCTCTGCTCGAATGTGATATCCT 58.852 43.478 0.00 0.00 0.00 3.24
1584 1671 4.586421 TCTCTGCTCGAATGTGATATCCTT 59.414 41.667 0.00 0.00 0.00 3.36
1585 1672 4.876125 TCTGCTCGAATGTGATATCCTTC 58.124 43.478 0.00 0.57 0.00 3.46
1586 1673 4.586421 TCTGCTCGAATGTGATATCCTTCT 59.414 41.667 0.00 0.00 0.00 2.85
1587 1674 5.770162 TCTGCTCGAATGTGATATCCTTCTA 59.230 40.000 0.00 0.00 0.00 2.10
1588 1675 6.018589 TGCTCGAATGTGATATCCTTCTAG 57.981 41.667 0.00 4.15 0.00 2.43
1589 1676 4.862018 GCTCGAATGTGATATCCTTCTAGC 59.138 45.833 14.71 14.71 31.91 3.42
1590 1677 5.565637 GCTCGAATGTGATATCCTTCTAGCA 60.566 44.000 19.96 4.69 36.78 3.49
1591 1678 6.018589 TCGAATGTGATATCCTTCTAGCAG 57.981 41.667 0.00 0.00 0.00 4.24
1592 1679 5.770162 TCGAATGTGATATCCTTCTAGCAGA 59.230 40.000 0.00 0.00 0.00 4.26
1593 1680 6.072230 TCGAATGTGATATCCTTCTAGCAGAG 60.072 42.308 0.00 0.00 0.00 3.35
1594 1681 6.072230 CGAATGTGATATCCTTCTAGCAGAGA 60.072 42.308 0.00 0.00 0.00 3.10
1595 1682 7.362834 CGAATGTGATATCCTTCTAGCAGAGAT 60.363 40.741 0.00 0.00 32.88 2.75
1596 1683 7.795534 ATGTGATATCCTTCTAGCAGAGATT 57.204 36.000 0.00 0.00 32.88 2.40
1597 1684 7.609097 TGTGATATCCTTCTAGCAGAGATTT 57.391 36.000 0.00 0.00 32.88 2.17
1598 1685 8.027524 TGTGATATCCTTCTAGCAGAGATTTT 57.972 34.615 0.00 0.00 32.88 1.82
1599 1686 9.147732 TGTGATATCCTTCTAGCAGAGATTTTA 57.852 33.333 0.00 0.00 32.88 1.52
1602 1689 9.097257 GATATCCTTCTAGCAGAGATTTTATGC 57.903 37.037 0.00 0.00 40.29 3.14
1603 1690 5.615289 TCCTTCTAGCAGAGATTTTATGCC 58.385 41.667 0.00 0.00 40.89 4.40
1604 1691 5.367937 TCCTTCTAGCAGAGATTTTATGCCT 59.632 40.000 0.00 0.00 40.89 4.75
1605 1692 5.700373 CCTTCTAGCAGAGATTTTATGCCTC 59.300 44.000 0.00 0.00 40.89 4.70
1606 1693 5.220710 TCTAGCAGAGATTTTATGCCTCC 57.779 43.478 0.00 0.00 40.89 4.30
1607 1694 4.904251 TCTAGCAGAGATTTTATGCCTCCT 59.096 41.667 0.00 0.00 40.89 3.69
1608 1695 6.077993 TCTAGCAGAGATTTTATGCCTCCTA 58.922 40.000 0.00 0.00 40.89 2.94
1609 1696 5.839517 AGCAGAGATTTTATGCCTCCTAT 57.160 39.130 0.00 0.00 40.89 2.57
1610 1697 6.198237 AGCAGAGATTTTATGCCTCCTATT 57.802 37.500 0.00 0.00 40.89 1.73
1611 1698 6.237154 AGCAGAGATTTTATGCCTCCTATTC 58.763 40.000 0.00 0.00 40.89 1.75
1612 1699 5.121454 GCAGAGATTTTATGCCTCCTATTCG 59.879 44.000 0.00 0.00 33.81 3.34
1613 1700 6.459066 CAGAGATTTTATGCCTCCTATTCGA 58.541 40.000 0.00 0.00 0.00 3.71
1614 1701 6.931281 CAGAGATTTTATGCCTCCTATTCGAA 59.069 38.462 0.00 0.00 0.00 3.71
1615 1702 7.117523 CAGAGATTTTATGCCTCCTATTCGAAG 59.882 40.741 3.35 0.00 0.00 3.79
1616 1703 5.703130 AGATTTTATGCCTCCTATTCGAAGC 59.297 40.000 3.35 0.49 0.00 3.86
1617 1704 4.415881 TTTATGCCTCCTATTCGAAGCA 57.584 40.909 9.55 9.55 34.28 3.91
1618 1705 4.415881 TTATGCCTCCTATTCGAAGCAA 57.584 40.909 10.94 0.28 33.35 3.91
1619 1706 2.315925 TGCCTCCTATTCGAAGCAAG 57.684 50.000 3.35 0.98 0.00 4.01
1620 1707 1.555075 TGCCTCCTATTCGAAGCAAGT 59.445 47.619 3.35 0.00 0.00 3.16
1621 1708 2.205911 GCCTCCTATTCGAAGCAAGTC 58.794 52.381 3.35 0.00 0.00 3.01
1622 1709 2.464865 CCTCCTATTCGAAGCAAGTCG 58.535 52.381 3.35 0.00 42.48 4.18
1623 1710 2.464865 CTCCTATTCGAAGCAAGTCGG 58.535 52.381 3.35 0.00 41.43 4.79
1624 1711 1.822990 TCCTATTCGAAGCAAGTCGGT 59.177 47.619 3.35 0.00 41.43 4.69
1625 1712 1.927174 CCTATTCGAAGCAAGTCGGTG 59.073 52.381 3.35 0.00 41.43 4.94
1626 1713 1.324736 CTATTCGAAGCAAGTCGGTGC 59.675 52.381 3.35 0.00 45.28 5.01
1632 1719 4.395583 GCAAGTCGGTGCTGCAGC 62.396 66.667 31.89 31.89 41.51 5.25
1649 1736 3.055719 CGCCATCGCCTTTGGTGT 61.056 61.111 0.00 0.00 39.42 4.16
1650 1737 2.877691 GCCATCGCCTTTGGTGTC 59.122 61.111 0.00 0.00 36.57 3.67
1651 1738 1.675641 GCCATCGCCTTTGGTGTCT 60.676 57.895 0.00 0.00 36.57 3.41
1652 1739 0.392461 GCCATCGCCTTTGGTGTCTA 60.392 55.000 0.00 0.00 36.57 2.59
1653 1740 1.948611 GCCATCGCCTTTGGTGTCTAA 60.949 52.381 0.00 0.00 36.57 2.10
1654 1741 2.009774 CCATCGCCTTTGGTGTCTAAG 58.990 52.381 0.00 0.00 34.40 2.18
1655 1742 2.354704 CCATCGCCTTTGGTGTCTAAGA 60.355 50.000 0.00 0.00 34.40 2.10
1656 1743 2.450609 TCGCCTTTGGTGTCTAAGAC 57.549 50.000 0.00 0.00 34.40 3.01
1657 1744 1.068474 CGCCTTTGGTGTCTAAGACG 58.932 55.000 0.00 0.00 34.95 4.18
1658 1745 1.439679 GCCTTTGGTGTCTAAGACGG 58.560 55.000 0.00 0.00 34.95 4.79
1659 1746 1.439679 CCTTTGGTGTCTAAGACGGC 58.560 55.000 0.00 0.00 34.95 5.68
1660 1747 1.068474 CTTTGGTGTCTAAGACGGCG 58.932 55.000 4.80 4.80 34.95 6.46
1661 1748 0.675083 TTTGGTGTCTAAGACGGCGA 59.325 50.000 16.62 0.00 34.95 5.54
1662 1749 0.038892 TTGGTGTCTAAGACGGCGAC 60.039 55.000 16.62 7.87 34.95 5.19
1663 1750 1.174078 TGGTGTCTAAGACGGCGACA 61.174 55.000 16.62 2.64 34.95 4.35
1665 1752 1.063951 GTGTCTAAGACGGCGACACG 61.064 60.000 16.62 0.00 45.25 4.49
1676 1763 4.052229 CGACACGCTCGGGAAGGT 62.052 66.667 0.00 0.00 38.87 3.50
1677 1764 2.126031 GACACGCTCGGGAAGGTC 60.126 66.667 0.00 0.00 0.00 3.85
1678 1765 3.644399 GACACGCTCGGGAAGGTCC 62.644 68.421 0.00 0.00 35.23 4.46
1679 1766 3.691342 CACGCTCGGGAAGGTCCA 61.691 66.667 0.00 0.00 38.64 4.02
1680 1767 3.692406 ACGCTCGGGAAGGTCCAC 61.692 66.667 0.00 0.00 38.64 4.02
1681 1768 4.452733 CGCTCGGGAAGGTCCACC 62.453 72.222 0.00 0.00 38.64 4.61
1682 1769 3.319198 GCTCGGGAAGGTCCACCA 61.319 66.667 0.00 0.00 38.64 4.17
1683 1770 2.670148 GCTCGGGAAGGTCCACCAT 61.670 63.158 0.00 0.00 38.64 3.55
1684 1771 1.221840 CTCGGGAAGGTCCACCATG 59.778 63.158 0.00 0.00 38.64 3.66
1685 1772 1.537889 TCGGGAAGGTCCACCATGT 60.538 57.895 0.00 0.00 38.64 3.21
1686 1773 1.131303 TCGGGAAGGTCCACCATGTT 61.131 55.000 0.00 0.00 38.64 2.71
1687 1774 0.960364 CGGGAAGGTCCACCATGTTG 60.960 60.000 0.00 0.00 38.64 3.33
1688 1775 0.404040 GGGAAGGTCCACCATGTTGA 59.596 55.000 0.00 0.00 38.64 3.18
1689 1776 1.005924 GGGAAGGTCCACCATGTTGAT 59.994 52.381 0.00 0.00 38.64 2.57
1690 1777 2.094675 GGAAGGTCCACCATGTTGATG 58.905 52.381 0.00 0.00 36.28 3.07
1691 1778 2.555227 GGAAGGTCCACCATGTTGATGT 60.555 50.000 0.00 0.00 36.28 3.06
1692 1779 2.496899 AGGTCCACCATGTTGATGTC 57.503 50.000 0.00 0.00 38.89 3.06
1693 1780 1.086696 GGTCCACCATGTTGATGTCG 58.913 55.000 0.00 0.00 35.64 4.35
1694 1781 1.338674 GGTCCACCATGTTGATGTCGA 60.339 52.381 0.00 0.00 35.64 4.20
1695 1782 2.632377 GTCCACCATGTTGATGTCGAT 58.368 47.619 0.00 0.00 0.00 3.59
1696 1783 3.009723 GTCCACCATGTTGATGTCGATT 58.990 45.455 0.00 0.00 0.00 3.34
1697 1784 3.063997 GTCCACCATGTTGATGTCGATTC 59.936 47.826 0.00 0.00 0.00 2.52
1698 1785 3.009026 CCACCATGTTGATGTCGATTCA 58.991 45.455 0.00 0.00 0.00 2.57
1699 1786 3.064408 CCACCATGTTGATGTCGATTCAG 59.936 47.826 0.00 0.00 0.00 3.02
1700 1787 2.679837 ACCATGTTGATGTCGATTCAGC 59.320 45.455 7.82 7.82 0.00 4.26
1701 1788 2.032550 CCATGTTGATGTCGATTCAGCC 59.967 50.000 10.97 4.04 0.00 4.85
1702 1789 2.470983 TGTTGATGTCGATTCAGCCA 57.529 45.000 10.97 5.98 0.00 4.75
1703 1790 2.989909 TGTTGATGTCGATTCAGCCAT 58.010 42.857 10.97 0.00 0.00 4.40
1704 1791 2.679336 TGTTGATGTCGATTCAGCCATG 59.321 45.455 10.97 0.00 0.00 3.66
1705 1792 1.302366 TGATGTCGATTCAGCCATGC 58.698 50.000 0.00 0.00 0.00 4.06
1706 1793 0.590195 GATGTCGATTCAGCCATGCC 59.410 55.000 0.00 0.00 0.00 4.40
1707 1794 0.107066 ATGTCGATTCAGCCATGCCA 60.107 50.000 0.00 0.00 0.00 4.92
1708 1795 0.107066 TGTCGATTCAGCCATGCCAT 60.107 50.000 0.00 0.00 0.00 4.40
1709 1796 0.309922 GTCGATTCAGCCATGCCATG 59.690 55.000 0.00 0.00 0.00 3.66
1710 1797 0.107066 TCGATTCAGCCATGCCATGT 60.107 50.000 3.63 0.00 0.00 3.21
1711 1798 0.030235 CGATTCAGCCATGCCATGTG 59.970 55.000 3.63 0.00 0.00 3.21
1712 1799 0.249322 GATTCAGCCATGCCATGTGC 60.249 55.000 3.63 6.96 41.77 4.57
1723 1810 2.182284 CATGTGCATGGCCGTTGG 59.818 61.111 0.00 0.00 35.24 3.77
1724 1811 2.035469 ATGTGCATGGCCGTTGGA 59.965 55.556 0.00 0.00 0.00 3.53
1725 1812 2.342650 ATGTGCATGGCCGTTGGAC 61.343 57.895 19.28 19.28 36.14 4.02
1726 1813 4.101790 GTGCATGGCCGTTGGACG 62.102 66.667 13.13 0.00 42.11 4.79
1747 1834 4.974721 CGGGGCAAAGGCACTGGT 62.975 66.667 0.00 0.00 46.48 4.00
1748 1835 3.305516 GGGGCAAAGGCACTGGTG 61.306 66.667 0.00 0.00 45.12 4.17
1749 1836 3.305516 GGGCAAAGGCACTGGTGG 61.306 66.667 2.84 0.00 41.45 4.61
1750 1837 3.305516 GGCAAAGGCACTGGTGGG 61.306 66.667 2.84 0.00 40.86 4.61
1751 1838 3.994853 GCAAAGGCACTGGTGGGC 61.995 66.667 2.84 0.00 40.86 5.36
1752 1839 2.521465 CAAAGGCACTGGTGGGCA 60.521 61.111 2.84 0.00 40.86 5.36
1753 1840 2.521708 AAAGGCACTGGTGGGCAC 60.522 61.111 2.84 0.00 40.86 5.01
1766 1853 2.045634 GGCACCATGAGCAGCTGA 60.046 61.111 20.43 0.00 0.00 4.26
1767 1854 2.113433 GGCACCATGAGCAGCTGAG 61.113 63.158 20.43 0.53 0.00 3.35
1768 1855 2.113433 GCACCATGAGCAGCTGAGG 61.113 63.158 20.43 12.54 0.00 3.86
1769 1856 1.451567 CACCATGAGCAGCTGAGGG 60.452 63.158 20.43 11.40 0.00 4.30
1770 1857 1.614525 ACCATGAGCAGCTGAGGGA 60.615 57.895 20.20 0.00 0.00 4.20
1771 1858 1.146485 CCATGAGCAGCTGAGGGAG 59.854 63.158 20.43 3.27 0.00 4.30
1772 1859 1.335882 CCATGAGCAGCTGAGGGAGA 61.336 60.000 20.43 0.00 0.00 3.71
1773 1860 0.759959 CATGAGCAGCTGAGGGAGAT 59.240 55.000 20.43 0.00 0.00 2.75
1774 1861 1.141254 CATGAGCAGCTGAGGGAGATT 59.859 52.381 20.43 0.00 0.00 2.40
1775 1862 0.829333 TGAGCAGCTGAGGGAGATTC 59.171 55.000 20.43 0.00 0.00 2.52
1776 1863 0.829333 GAGCAGCTGAGGGAGATTCA 59.171 55.000 20.43 0.00 0.00 2.57
1777 1864 0.540923 AGCAGCTGAGGGAGATTCAC 59.459 55.000 20.43 0.00 0.00 3.18
1778 1865 0.809241 GCAGCTGAGGGAGATTCACG 60.809 60.000 20.43 0.00 0.00 4.35
1779 1866 0.534412 CAGCTGAGGGAGATTCACGT 59.466 55.000 8.42 0.00 0.00 4.49
1780 1867 0.820871 AGCTGAGGGAGATTCACGTC 59.179 55.000 0.00 0.00 0.00 4.34
1781 1868 0.526524 GCTGAGGGAGATTCACGTCG 60.527 60.000 0.00 0.00 0.00 5.12
1782 1869 1.095600 CTGAGGGAGATTCACGTCGA 58.904 55.000 0.00 0.00 0.00 4.20
1783 1870 1.678627 CTGAGGGAGATTCACGTCGAT 59.321 52.381 0.00 0.00 0.00 3.59
1784 1871 1.405463 TGAGGGAGATTCACGTCGATG 59.595 52.381 2.26 2.26 0.00 3.84
1785 1872 1.405821 GAGGGAGATTCACGTCGATGT 59.594 52.381 3.92 3.92 0.00 3.06
1786 1873 2.617308 GAGGGAGATTCACGTCGATGTA 59.383 50.000 10.54 0.00 0.00 2.29
1787 1874 2.619177 AGGGAGATTCACGTCGATGTAG 59.381 50.000 10.54 5.48 0.00 2.74
1788 1875 2.386249 GGAGATTCACGTCGATGTAGC 58.614 52.381 10.54 0.00 0.00 3.58
1789 1876 2.037649 GAGATTCACGTCGATGTAGCG 58.962 52.381 10.54 0.00 0.00 4.26
1790 1877 1.121240 GATTCACGTCGATGTAGCGG 58.879 55.000 10.54 0.00 0.00 5.52
1791 1878 0.870307 ATTCACGTCGATGTAGCGGC 60.870 55.000 10.54 0.00 0.00 6.53
1792 1879 2.202557 CACGTCGATGTAGCGGCA 60.203 61.111 10.54 0.00 35.20 5.69
1793 1880 2.102357 ACGTCGATGTAGCGGCAG 59.898 61.111 8.94 0.00 35.20 4.85
1794 1881 3.323136 CGTCGATGTAGCGGCAGC 61.323 66.667 0.00 0.00 45.58 5.25
1805 1892 2.571757 CGGCAGCTTCGTGACCTA 59.428 61.111 0.00 0.00 0.00 3.08
1806 1893 1.141881 CGGCAGCTTCGTGACCTAT 59.858 57.895 0.00 0.00 0.00 2.57
1807 1894 1.148157 CGGCAGCTTCGTGACCTATG 61.148 60.000 0.00 0.00 0.00 2.23
1808 1895 0.811616 GGCAGCTTCGTGACCTATGG 60.812 60.000 0.00 0.00 0.00 2.74
1809 1896 0.811616 GCAGCTTCGTGACCTATGGG 60.812 60.000 0.00 0.00 38.88 4.00
1821 1908 3.713826 ACCTATGGGTTGTTTCGTGAT 57.286 42.857 0.00 0.00 44.73 3.06
1822 1909 3.343617 ACCTATGGGTTGTTTCGTGATG 58.656 45.455 0.00 0.00 44.73 3.07
1823 1910 2.097466 CCTATGGGTTGTTTCGTGATGC 59.903 50.000 0.00 0.00 0.00 3.91
1824 1911 0.887933 ATGGGTTGTTTCGTGATGCC 59.112 50.000 0.00 0.00 0.00 4.40
1825 1912 1.175983 TGGGTTGTTTCGTGATGCCC 61.176 55.000 0.00 0.00 35.37 5.36
1826 1913 1.175983 GGGTTGTTTCGTGATGCCCA 61.176 55.000 0.00 0.00 34.95 5.36
1827 1914 0.671251 GGTTGTTTCGTGATGCCCAA 59.329 50.000 0.00 0.00 0.00 4.12
1828 1915 1.601914 GGTTGTTTCGTGATGCCCAAC 60.602 52.381 0.00 0.00 33.27 3.77
1829 1916 1.336755 GTTGTTTCGTGATGCCCAACT 59.663 47.619 0.00 0.00 31.79 3.16
1830 1917 0.950836 TGTTTCGTGATGCCCAACTG 59.049 50.000 0.00 0.00 0.00 3.16
1831 1918 0.240945 GTTTCGTGATGCCCAACTGG 59.759 55.000 0.00 0.00 37.09 4.00
1832 1919 0.109532 TTTCGTGATGCCCAACTGGA 59.890 50.000 0.00 0.00 37.39 3.86
1833 1920 0.321564 TTCGTGATGCCCAACTGGAG 60.322 55.000 0.00 0.00 37.39 3.86
1834 1921 2.401766 CGTGATGCCCAACTGGAGC 61.402 63.158 0.00 0.00 37.39 4.70
1835 1922 1.001641 GTGATGCCCAACTGGAGCT 60.002 57.895 0.00 0.00 37.39 4.09
1836 1923 1.028868 GTGATGCCCAACTGGAGCTC 61.029 60.000 4.71 4.71 37.39 4.09
1837 1924 1.452833 GATGCCCAACTGGAGCTCC 60.453 63.158 26.78 26.78 37.39 4.70
1838 1925 2.900671 GATGCCCAACTGGAGCTCCC 62.901 65.000 29.95 12.91 37.39 4.30
1839 1926 3.650950 GCCCAACTGGAGCTCCCA 61.651 66.667 29.95 16.48 44.25 4.37
1840 1927 3.170362 CCCAACTGGAGCTCCCAA 58.830 61.111 29.95 11.64 46.07 4.12
1841 1928 1.693640 CCCAACTGGAGCTCCCAAT 59.306 57.895 29.95 12.45 46.07 3.16
1842 1929 0.040204 CCCAACTGGAGCTCCCAATT 59.960 55.000 29.95 17.71 46.07 2.32
1845 1932 2.978156 AACTGGAGCTCCCAATTGAA 57.022 45.000 29.95 8.46 46.07 2.69
1846 1933 2.503895 ACTGGAGCTCCCAATTGAAG 57.496 50.000 29.95 19.88 46.07 3.02
1847 1934 1.988107 ACTGGAGCTCCCAATTGAAGA 59.012 47.619 29.95 6.89 46.07 2.87
1848 1935 2.026449 ACTGGAGCTCCCAATTGAAGAG 60.026 50.000 29.95 18.45 46.07 2.85
1849 1936 2.238144 CTGGAGCTCCCAATTGAAGAGA 59.762 50.000 29.95 5.55 46.07 3.10
1850 1937 2.644299 TGGAGCTCCCAATTGAAGAGAA 59.356 45.455 29.95 3.15 43.29 2.87
1851 1938 3.267812 TGGAGCTCCCAATTGAAGAGAAT 59.732 43.478 29.95 13.27 43.29 2.40
1852 1939 3.631227 GGAGCTCCCAATTGAAGAGAATG 59.369 47.826 23.19 4.59 34.14 2.67
1853 1940 3.629087 AGCTCCCAATTGAAGAGAATGG 58.371 45.455 22.42 7.89 0.00 3.16
1854 1941 3.267812 AGCTCCCAATTGAAGAGAATGGA 59.732 43.478 22.42 11.16 0.00 3.41
1855 1942 3.631227 GCTCCCAATTGAAGAGAATGGAG 59.369 47.826 22.42 18.75 40.83 3.86
1856 1943 3.624777 TCCCAATTGAAGAGAATGGAGC 58.375 45.455 7.12 0.00 0.00 4.70
1857 1944 2.692041 CCCAATTGAAGAGAATGGAGCC 59.308 50.000 7.12 0.00 0.00 4.70
1858 1945 2.692041 CCAATTGAAGAGAATGGAGCCC 59.308 50.000 7.12 0.00 0.00 5.19
1859 1946 3.359033 CAATTGAAGAGAATGGAGCCCA 58.641 45.455 0.00 0.00 38.19 5.36
1860 1947 2.795231 TTGAAGAGAATGGAGCCCAG 57.205 50.000 0.41 0.00 36.75 4.45
1861 1948 1.956869 TGAAGAGAATGGAGCCCAGA 58.043 50.000 0.41 0.00 36.75 3.86
1862 1949 2.269023 TGAAGAGAATGGAGCCCAGAA 58.731 47.619 0.41 0.00 36.75 3.02
1863 1950 2.848694 TGAAGAGAATGGAGCCCAGAAT 59.151 45.455 0.41 0.00 36.75 2.40
1864 1951 3.267812 TGAAGAGAATGGAGCCCAGAATT 59.732 43.478 0.41 0.00 36.75 2.17
1865 1952 4.264083 TGAAGAGAATGGAGCCCAGAATTT 60.264 41.667 0.41 0.00 36.75 1.82
1866 1953 4.328118 AGAGAATGGAGCCCAGAATTTT 57.672 40.909 0.41 0.00 36.75 1.82
1867 1954 4.021916 AGAGAATGGAGCCCAGAATTTTG 58.978 43.478 0.41 0.00 36.75 2.44
1868 1955 3.102204 AGAATGGAGCCCAGAATTTTGG 58.898 45.455 8.06 8.06 36.75 3.28
1869 1956 2.925966 ATGGAGCCCAGAATTTTGGA 57.074 45.000 16.44 0.00 40.87 3.53
1870 1957 2.692709 TGGAGCCCAGAATTTTGGAA 57.307 45.000 16.44 0.00 40.87 3.53
1871 1958 2.528564 TGGAGCCCAGAATTTTGGAAG 58.471 47.619 16.44 1.97 40.87 3.46
1872 1959 2.109834 TGGAGCCCAGAATTTTGGAAGA 59.890 45.455 16.44 0.00 40.87 2.87
1873 1960 3.245730 TGGAGCCCAGAATTTTGGAAGAT 60.246 43.478 16.44 0.00 40.87 2.40
1874 1961 3.131755 GGAGCCCAGAATTTTGGAAGATG 59.868 47.826 16.44 0.54 40.87 2.90
1875 1962 3.102204 AGCCCAGAATTTTGGAAGATGG 58.898 45.455 16.44 0.00 40.87 3.51
1876 1963 2.419159 GCCCAGAATTTTGGAAGATGGC 60.419 50.000 16.44 6.29 40.87 4.40
1877 1964 2.833338 CCCAGAATTTTGGAAGATGGCA 59.167 45.455 16.44 0.00 40.87 4.92
1878 1965 3.261390 CCCAGAATTTTGGAAGATGGCAA 59.739 43.478 16.44 0.00 40.87 4.52
1879 1966 4.248058 CCAGAATTTTGGAAGATGGCAAC 58.752 43.478 9.43 0.00 40.87 4.17
1880 1967 4.020839 CCAGAATTTTGGAAGATGGCAACT 60.021 41.667 9.43 0.00 40.87 3.16
1881 1968 5.511888 CCAGAATTTTGGAAGATGGCAACTT 60.512 40.000 9.99 9.99 40.87 2.66
1882 1969 5.636543 CAGAATTTTGGAAGATGGCAACTTC 59.363 40.000 24.49 24.49 41.79 3.01
1890 1977 1.710013 GATGGCAACTTCTTCGTCGA 58.290 50.000 0.00 0.00 37.74 4.20
1891 1978 2.271800 GATGGCAACTTCTTCGTCGAT 58.728 47.619 0.00 0.00 37.74 3.59
1892 1979 1.428448 TGGCAACTTCTTCGTCGATG 58.572 50.000 0.00 0.00 37.61 3.84
1893 1980 0.095417 GGCAACTTCTTCGTCGATGC 59.905 55.000 7.54 7.54 0.00 3.91
1894 1981 0.095417 GCAACTTCTTCGTCGATGCC 59.905 55.000 0.00 0.00 0.00 4.40
1895 1982 0.721718 CAACTTCTTCGTCGATGCCC 59.278 55.000 0.00 0.00 0.00 5.36
1896 1983 0.608640 AACTTCTTCGTCGATGCCCT 59.391 50.000 0.00 0.00 0.00 5.19
1897 1984 0.608640 ACTTCTTCGTCGATGCCCTT 59.391 50.000 0.00 0.00 0.00 3.95
1898 1985 1.822990 ACTTCTTCGTCGATGCCCTTA 59.177 47.619 0.00 0.00 0.00 2.69
1899 1986 2.159226 ACTTCTTCGTCGATGCCCTTAG 60.159 50.000 0.00 0.00 0.00 2.18
1900 1987 1.758936 TCTTCGTCGATGCCCTTAGA 58.241 50.000 0.00 0.00 0.00 2.10
1901 1988 2.097036 TCTTCGTCGATGCCCTTAGAA 58.903 47.619 0.00 0.00 0.00 2.10
1902 1989 2.159282 TCTTCGTCGATGCCCTTAGAAC 60.159 50.000 0.00 0.00 0.00 3.01
1903 1990 0.458669 TCGTCGATGCCCTTAGAACC 59.541 55.000 0.00 0.00 0.00 3.62
1904 1991 0.174845 CGTCGATGCCCTTAGAACCA 59.825 55.000 0.00 0.00 0.00 3.67
1905 1992 1.404986 CGTCGATGCCCTTAGAACCAA 60.405 52.381 0.00 0.00 0.00 3.67
1906 1993 2.741878 CGTCGATGCCCTTAGAACCAAT 60.742 50.000 0.00 0.00 0.00 3.16
1907 1994 3.491964 CGTCGATGCCCTTAGAACCAATA 60.492 47.826 0.00 0.00 0.00 1.90
1908 1995 4.058817 GTCGATGCCCTTAGAACCAATAG 58.941 47.826 0.00 0.00 0.00 1.73
1909 1996 3.964688 TCGATGCCCTTAGAACCAATAGA 59.035 43.478 0.00 0.00 0.00 1.98
1910 1997 4.593206 TCGATGCCCTTAGAACCAATAGAT 59.407 41.667 0.00 0.00 0.00 1.98
1911 1998 4.692625 CGATGCCCTTAGAACCAATAGATG 59.307 45.833 0.00 0.00 0.00 2.90
1924 2011 5.541953 CCAATAGATGGTGTGAGATCTGA 57.458 43.478 0.00 0.00 44.85 3.27
1925 2012 5.922053 CCAATAGATGGTGTGAGATCTGAA 58.078 41.667 0.00 0.00 44.85 3.02
1926 2013 5.990386 CCAATAGATGGTGTGAGATCTGAAG 59.010 44.000 0.00 0.00 44.85 3.02
1927 2014 6.407865 CCAATAGATGGTGTGAGATCTGAAGT 60.408 42.308 0.00 0.00 44.85 3.01
1928 2015 4.468765 AGATGGTGTGAGATCTGAAGTG 57.531 45.455 0.00 0.00 0.00 3.16
1929 2016 3.837146 AGATGGTGTGAGATCTGAAGTGT 59.163 43.478 0.00 0.00 0.00 3.55
1930 2017 3.391506 TGGTGTGAGATCTGAAGTGTG 57.608 47.619 0.00 0.00 0.00 3.82
1931 2018 2.965147 TGGTGTGAGATCTGAAGTGTGA 59.035 45.455 0.00 0.00 0.00 3.58
1932 2019 3.580022 TGGTGTGAGATCTGAAGTGTGAT 59.420 43.478 0.00 0.00 0.00 3.06
1933 2020 4.180057 GGTGTGAGATCTGAAGTGTGATC 58.820 47.826 0.00 0.00 39.32 2.92
1934 2021 3.856521 GTGTGAGATCTGAAGTGTGATCG 59.143 47.826 0.00 0.00 42.62 3.69
1935 2022 3.758554 TGTGAGATCTGAAGTGTGATCGA 59.241 43.478 0.00 0.00 42.62 3.59
1936 2023 4.101942 GTGAGATCTGAAGTGTGATCGAC 58.898 47.826 0.00 0.00 42.62 4.20
1937 2024 4.013050 TGAGATCTGAAGTGTGATCGACT 58.987 43.478 0.00 0.00 42.62 4.18
1938 2025 4.142513 TGAGATCTGAAGTGTGATCGACTG 60.143 45.833 0.00 0.00 42.62 3.51
1939 2026 3.761218 AGATCTGAAGTGTGATCGACTGT 59.239 43.478 0.00 0.00 42.62 3.55
1940 2027 4.219507 AGATCTGAAGTGTGATCGACTGTT 59.780 41.667 0.00 0.00 42.62 3.16
1941 2028 3.642705 TCTGAAGTGTGATCGACTGTTG 58.357 45.455 0.00 0.00 0.00 3.33
1942 2029 2.733552 CTGAAGTGTGATCGACTGTTGG 59.266 50.000 0.00 0.00 0.00 3.77
1943 2030 2.364002 TGAAGTGTGATCGACTGTTGGA 59.636 45.455 0.00 0.00 0.00 3.53
1944 2031 3.006859 TGAAGTGTGATCGACTGTTGGAT 59.993 43.478 0.00 0.00 0.00 3.41
1945 2032 2.964740 AGTGTGATCGACTGTTGGATG 58.035 47.619 0.00 0.00 0.00 3.51
1946 2033 2.002586 GTGTGATCGACTGTTGGATGG 58.997 52.381 0.00 0.00 0.00 3.51
1947 2034 1.066215 TGTGATCGACTGTTGGATGGG 60.066 52.381 0.00 0.00 0.00 4.00
1948 2035 1.066143 GTGATCGACTGTTGGATGGGT 60.066 52.381 0.00 0.00 0.00 4.51
1949 2036 1.066215 TGATCGACTGTTGGATGGGTG 60.066 52.381 0.00 0.00 0.00 4.61
1950 2037 0.392998 ATCGACTGTTGGATGGGTGC 60.393 55.000 0.00 0.00 0.00 5.01
1951 2038 2.040544 CGACTGTTGGATGGGTGCC 61.041 63.158 0.00 0.00 0.00 5.01
1952 2039 2.034066 ACTGTTGGATGGGTGCCG 59.966 61.111 0.00 0.00 0.00 5.69
1953 2040 2.751436 CTGTTGGATGGGTGCCGG 60.751 66.667 0.00 0.00 0.00 6.13
1954 2041 4.358841 TGTTGGATGGGTGCCGGG 62.359 66.667 2.18 0.00 0.00 5.73
1955 2042 4.041762 GTTGGATGGGTGCCGGGA 62.042 66.667 2.18 0.00 0.00 5.14
1956 2043 4.041762 TTGGATGGGTGCCGGGAC 62.042 66.667 19.24 19.24 0.00 4.46
1969 2056 2.998949 GGGACGGAGCCAGGATTT 59.001 61.111 0.00 0.00 0.00 2.17
1970 2057 1.452108 GGGACGGAGCCAGGATTTG 60.452 63.158 0.00 0.00 0.00 2.32
1981 2068 2.062971 CAGGATTTGGACATGAGGGG 57.937 55.000 0.00 0.00 0.00 4.79
1982 2069 0.929244 AGGATTTGGACATGAGGGGG 59.071 55.000 0.00 0.00 0.00 5.40
2012 2099 4.769345 AAAAACCAGAGCCATTTCCAAA 57.231 36.364 0.00 0.00 0.00 3.28
2013 2100 4.980339 AAAACCAGAGCCATTTCCAAAT 57.020 36.364 0.00 0.00 0.00 2.32
2014 2101 4.980339 AAACCAGAGCCATTTCCAAATT 57.020 36.364 0.00 0.00 0.00 1.82
2015 2102 4.980339 AACCAGAGCCATTTCCAAATTT 57.020 36.364 0.00 0.00 0.00 1.82
2016 2103 4.980339 ACCAGAGCCATTTCCAAATTTT 57.020 36.364 0.00 0.00 0.00 1.82
2017 2104 6.432403 AACCAGAGCCATTTCCAAATTTTA 57.568 33.333 0.00 0.00 0.00 1.52
2018 2105 6.432403 ACCAGAGCCATTTCCAAATTTTAA 57.568 33.333 0.00 0.00 0.00 1.52
2019 2106 6.836242 ACCAGAGCCATTTCCAAATTTTAAA 58.164 32.000 0.00 0.00 0.00 1.52
2020 2107 7.460910 ACCAGAGCCATTTCCAAATTTTAAAT 58.539 30.769 0.00 0.00 0.00 1.40
2021 2108 7.944000 ACCAGAGCCATTTCCAAATTTTAAATT 59.056 29.630 0.00 0.00 0.00 1.82
2022 2109 8.453320 CCAGAGCCATTTCCAAATTTTAAATTC 58.547 33.333 3.23 3.29 0.00 2.17
2023 2110 9.001542 CAGAGCCATTTCCAAATTTTAAATTCA 57.998 29.630 3.23 0.00 0.00 2.57
2024 2111 9.743581 AGAGCCATTTCCAAATTTTAAATTCAT 57.256 25.926 3.23 0.00 0.00 2.57
2025 2112 9.992910 GAGCCATTTCCAAATTTTAAATTCATC 57.007 29.630 3.23 2.55 0.00 2.92
2026 2113 9.743581 AGCCATTTCCAAATTTTAAATTCATCT 57.256 25.926 3.23 0.00 0.00 2.90
2032 2119 9.558396 TTCCAAATTTTAAATTCATCTTGTGCT 57.442 25.926 3.23 0.00 0.00 4.40
2033 2120 9.558396 TCCAAATTTTAAATTCATCTTGTGCTT 57.442 25.926 3.23 0.00 0.00 3.91
2034 2121 9.815936 CCAAATTTTAAATTCATCTTGTGCTTC 57.184 29.630 3.23 0.00 0.00 3.86
2041 2128 6.690194 AATTCATCTTGTGCTTCATCTACC 57.310 37.500 0.00 0.00 0.00 3.18
2042 2129 4.824479 TCATCTTGTGCTTCATCTACCA 57.176 40.909 0.00 0.00 0.00 3.25
2043 2130 5.363562 TCATCTTGTGCTTCATCTACCAT 57.636 39.130 0.00 0.00 0.00 3.55
2044 2131 5.363101 TCATCTTGTGCTTCATCTACCATC 58.637 41.667 0.00 0.00 0.00 3.51
2045 2132 4.824479 TCTTGTGCTTCATCTACCATCA 57.176 40.909 0.00 0.00 0.00 3.07
2046 2133 5.363562 TCTTGTGCTTCATCTACCATCAT 57.636 39.130 0.00 0.00 0.00 2.45
2047 2134 6.484364 TCTTGTGCTTCATCTACCATCATA 57.516 37.500 0.00 0.00 0.00 2.15
2048 2135 6.283694 TCTTGTGCTTCATCTACCATCATAC 58.716 40.000 0.00 0.00 0.00 2.39
2049 2136 5.612725 TGTGCTTCATCTACCATCATACA 57.387 39.130 0.00 0.00 0.00 2.29
2050 2137 6.178607 TGTGCTTCATCTACCATCATACAT 57.821 37.500 0.00 0.00 0.00 2.29
2051 2138 7.301868 TGTGCTTCATCTACCATCATACATA 57.698 36.000 0.00 0.00 0.00 2.29
2052 2139 7.734942 TGTGCTTCATCTACCATCATACATAA 58.265 34.615 0.00 0.00 0.00 1.90
2053 2140 7.657354 TGTGCTTCATCTACCATCATACATAAC 59.343 37.037 0.00 0.00 0.00 1.89
2054 2141 7.875041 GTGCTTCATCTACCATCATACATAACT 59.125 37.037 0.00 0.00 0.00 2.24
2055 2142 8.432013 TGCTTCATCTACCATCATACATAACTT 58.568 33.333 0.00 0.00 0.00 2.66
2056 2143 9.929180 GCTTCATCTACCATCATACATAACTTA 57.071 33.333 0.00 0.00 0.00 2.24
2091 2178 8.888579 TTTGAGAAAGTAACTCGAGAATTTCT 57.111 30.769 22.09 22.09 39.12 2.52
2092 2179 8.888579 TTGAGAAAGTAACTCGAGAATTTCTT 57.111 30.769 22.53 13.54 37.18 2.52
2093 2180 8.299262 TGAGAAAGTAACTCGAGAATTTCTTG 57.701 34.615 22.53 7.26 37.18 3.02
2094 2181 7.926555 TGAGAAAGTAACTCGAGAATTTCTTGT 59.073 33.333 22.53 8.29 37.18 3.16
2095 2182 8.664211 AGAAAGTAACTCGAGAATTTCTTGTT 57.336 30.769 21.68 13.18 34.27 2.83
2096 2183 8.552034 AGAAAGTAACTCGAGAATTTCTTGTTG 58.448 33.333 21.68 9.58 34.27 3.33
2097 2184 6.229561 AGTAACTCGAGAATTTCTTGTTGC 57.770 37.500 21.68 13.71 0.00 4.17
2098 2185 3.795561 ACTCGAGAATTTCTTGTTGCG 57.204 42.857 21.68 5.96 0.00 4.85
2099 2186 2.096218 ACTCGAGAATTTCTTGTTGCGC 60.096 45.455 21.68 0.00 0.00 6.09
2100 2187 1.870402 TCGAGAATTTCTTGTTGCGCA 59.130 42.857 5.66 5.66 0.00 6.09
2101 2188 2.289274 TCGAGAATTTCTTGTTGCGCAA 59.711 40.909 21.02 21.02 35.50 4.85
2102 2189 3.058293 TCGAGAATTTCTTGTTGCGCAAT 60.058 39.130 27.79 7.29 36.36 3.56
2103 2190 3.670055 CGAGAATTTCTTGTTGCGCAATT 59.330 39.130 27.79 14.51 36.36 2.32
2104 2191 4.148696 CGAGAATTTCTTGTTGCGCAATTT 59.851 37.500 27.79 11.06 36.36 1.82
2105 2192 5.333046 AGAATTTCTTGTTGCGCAATTTG 57.667 34.783 27.79 18.01 36.36 2.32
2106 2193 4.211794 AGAATTTCTTGTTGCGCAATTTGG 59.788 37.500 27.79 16.17 36.36 3.28
2107 2194 2.593346 TTCTTGTTGCGCAATTTGGT 57.407 40.000 27.79 0.00 36.36 3.67
2108 2195 3.717400 TTCTTGTTGCGCAATTTGGTA 57.283 38.095 27.79 7.87 36.36 3.25
2109 2196 3.281341 TCTTGTTGCGCAATTTGGTAG 57.719 42.857 27.79 15.97 36.36 3.18
2110 2197 2.030363 TCTTGTTGCGCAATTTGGTAGG 60.030 45.455 27.79 10.61 36.36 3.18
2111 2198 1.323412 TGTTGCGCAATTTGGTAGGT 58.677 45.000 27.79 0.00 0.00 3.08
2112 2199 2.505405 TGTTGCGCAATTTGGTAGGTA 58.495 42.857 27.79 0.00 0.00 3.08
2113 2200 3.085533 TGTTGCGCAATTTGGTAGGTAT 58.914 40.909 27.79 0.00 0.00 2.73
2114 2201 4.262617 TGTTGCGCAATTTGGTAGGTATA 58.737 39.130 27.79 0.00 0.00 1.47
2115 2202 4.095185 TGTTGCGCAATTTGGTAGGTATAC 59.905 41.667 27.79 9.18 0.00 1.47
2116 2203 4.145365 TGCGCAATTTGGTAGGTATACT 57.855 40.909 8.16 0.00 32.12 2.12
2117 2204 4.519213 TGCGCAATTTGGTAGGTATACTT 58.481 39.130 8.16 0.00 32.12 2.24
2118 2205 4.944930 TGCGCAATTTGGTAGGTATACTTT 59.055 37.500 8.16 0.00 32.12 2.66
2119 2206 5.163703 TGCGCAATTTGGTAGGTATACTTTG 60.164 40.000 8.16 0.00 32.12 2.77
2120 2207 5.065474 GCGCAATTTGGTAGGTATACTTTGA 59.935 40.000 0.30 0.00 32.12 2.69
2121 2208 6.403855 GCGCAATTTGGTAGGTATACTTTGAA 60.404 38.462 0.30 0.00 32.12 2.69
2122 2209 7.681065 GCGCAATTTGGTAGGTATACTTTGAAT 60.681 37.037 0.30 0.00 32.12 2.57
2123 2210 8.188139 CGCAATTTGGTAGGTATACTTTGAATT 58.812 33.333 2.25 0.94 32.12 2.17
2124 2211 9.869757 GCAATTTGGTAGGTATACTTTGAATTT 57.130 29.630 2.25 0.00 32.12 1.82
2148 2235 6.654793 TTTTGGTGCATGTTTTAAGACAAC 57.345 33.333 2.58 0.00 32.47 3.32
2149 2236 4.991153 TGGTGCATGTTTTAAGACAACA 57.009 36.364 2.58 2.41 38.49 3.33
2150 2237 5.528043 TGGTGCATGTTTTAAGACAACAT 57.472 34.783 2.58 0.73 44.14 2.71
2151 2238 5.527951 TGGTGCATGTTTTAAGACAACATC 58.472 37.500 2.58 5.98 41.91 3.06
2152 2239 5.068329 TGGTGCATGTTTTAAGACAACATCA 59.932 36.000 11.95 11.95 41.91 3.07
2153 2240 6.158598 GGTGCATGTTTTAAGACAACATCAT 58.841 36.000 2.58 0.00 41.91 2.45
2154 2241 6.646240 GGTGCATGTTTTAAGACAACATCATT 59.354 34.615 2.58 0.00 41.91 2.57
2155 2242 7.171337 GGTGCATGTTTTAAGACAACATCATTT 59.829 33.333 2.58 0.00 41.91 2.32
2156 2243 8.216453 GTGCATGTTTTAAGACAACATCATTTC 58.784 33.333 2.58 0.00 41.91 2.17
2157 2244 8.143193 TGCATGTTTTAAGACAACATCATTTCT 58.857 29.630 2.58 0.00 41.91 2.52
2158 2245 8.642020 GCATGTTTTAAGACAACATCATTTCTC 58.358 33.333 2.58 0.00 41.91 2.87
2159 2246 9.903682 CATGTTTTAAGACAACATCATTTCTCT 57.096 29.630 2.58 0.00 41.91 3.10
2165 2252 7.531280 AAGACAACATCATTTCTCTACATCG 57.469 36.000 0.00 0.00 0.00 3.84
2166 2253 6.045318 AGACAACATCATTTCTCTACATCGG 58.955 40.000 0.00 0.00 0.00 4.18
2167 2254 5.734720 ACAACATCATTTCTCTACATCGGT 58.265 37.500 0.00 0.00 0.00 4.69
2168 2255 6.873997 ACAACATCATTTCTCTACATCGGTA 58.126 36.000 0.00 0.00 0.00 4.02
2169 2256 7.500992 ACAACATCATTTCTCTACATCGGTAT 58.499 34.615 0.00 0.00 0.00 2.73
2170 2257 8.638873 ACAACATCATTTCTCTACATCGGTATA 58.361 33.333 0.00 0.00 0.00 1.47
2171 2258 9.476202 CAACATCATTTCTCTACATCGGTATAA 57.524 33.333 0.00 0.00 0.00 0.98
2178 2265 8.644318 TTTCTCTACATCGGTATAAAAAGAGC 57.356 34.615 0.00 0.00 0.00 4.09
2179 2266 6.436261 TCTCTACATCGGTATAAAAAGAGCG 58.564 40.000 0.00 0.00 37.89 5.03
2185 2272 4.813027 TCGGTATAAAAAGAGCGAGTTGT 58.187 39.130 0.00 0.00 40.35 3.32
2186 2273 4.624024 TCGGTATAAAAAGAGCGAGTTGTG 59.376 41.667 0.00 0.00 40.35 3.33
2187 2274 4.201685 CGGTATAAAAAGAGCGAGTTGTGG 60.202 45.833 0.00 0.00 38.81 4.17
2188 2275 4.933400 GGTATAAAAAGAGCGAGTTGTGGA 59.067 41.667 0.00 0.00 0.00 4.02
2189 2276 5.063564 GGTATAAAAAGAGCGAGTTGTGGAG 59.936 44.000 0.00 0.00 0.00 3.86
2190 2277 2.910688 AAAAGAGCGAGTTGTGGAGA 57.089 45.000 0.00 0.00 0.00 3.71
2191 2278 3.409026 AAAAGAGCGAGTTGTGGAGAT 57.591 42.857 0.00 0.00 0.00 2.75
2192 2279 2.376808 AAGAGCGAGTTGTGGAGATG 57.623 50.000 0.00 0.00 0.00 2.90
2193 2280 0.108424 AGAGCGAGTTGTGGAGATGC 60.108 55.000 0.00 0.00 0.00 3.91
2194 2281 0.390340 GAGCGAGTTGTGGAGATGCA 60.390 55.000 0.00 0.00 0.00 3.96
2195 2282 0.035317 AGCGAGTTGTGGAGATGCAA 59.965 50.000 0.00 0.00 0.00 4.08
2196 2283 0.166814 GCGAGTTGTGGAGATGCAAC 59.833 55.000 0.00 0.00 43.63 4.17
2197 2284 1.511850 CGAGTTGTGGAGATGCAACA 58.488 50.000 9.58 0.00 45.16 3.33
2198 2285 1.872952 CGAGTTGTGGAGATGCAACAA 59.127 47.619 9.58 0.00 45.16 2.83
2199 2286 2.290367 CGAGTTGTGGAGATGCAACAAA 59.710 45.455 2.58 0.00 45.16 2.83
2200 2287 3.058016 CGAGTTGTGGAGATGCAACAAAT 60.058 43.478 2.58 1.85 45.16 2.32
2201 2288 4.479619 GAGTTGTGGAGATGCAACAAATC 58.520 43.478 11.50 11.50 45.16 2.17
2202 2289 4.147321 AGTTGTGGAGATGCAACAAATCT 58.853 39.130 2.58 0.00 45.16 2.40
2203 2290 4.586001 AGTTGTGGAGATGCAACAAATCTT 59.414 37.500 2.58 0.00 45.16 2.40
2204 2291 4.508461 TGTGGAGATGCAACAAATCTTG 57.492 40.909 0.00 0.00 34.50 3.02
2205 2292 3.248266 GTGGAGATGCAACAAATCTTGC 58.752 45.455 0.00 0.00 45.80 4.01
2206 2293 2.231964 TGGAGATGCAACAAATCTTGCC 59.768 45.455 0.00 0.00 45.13 4.52
2207 2294 2.494870 GGAGATGCAACAAATCTTGCCT 59.505 45.455 0.00 0.00 45.13 4.75
2208 2295 3.508762 GAGATGCAACAAATCTTGCCTG 58.491 45.455 0.00 0.00 45.13 4.85
2209 2296 2.895404 AGATGCAACAAATCTTGCCTGT 59.105 40.909 0.00 0.00 45.13 4.00
2210 2297 3.322828 AGATGCAACAAATCTTGCCTGTT 59.677 39.130 0.00 0.00 45.13 3.16
2211 2298 3.096489 TGCAACAAATCTTGCCTGTTC 57.904 42.857 1.64 0.00 45.13 3.18
2212 2299 2.429971 TGCAACAAATCTTGCCTGTTCA 59.570 40.909 1.64 0.00 45.13 3.18
2213 2300 3.118847 TGCAACAAATCTTGCCTGTTCAA 60.119 39.130 1.64 0.00 45.13 2.69
2214 2301 3.245990 GCAACAAATCTTGCCTGTTCAAC 59.754 43.478 0.00 0.00 40.68 3.18
2215 2302 3.733443 ACAAATCTTGCCTGTTCAACC 57.267 42.857 0.00 0.00 0.00 3.77
2216 2303 2.034558 ACAAATCTTGCCTGTTCAACCG 59.965 45.455 0.00 0.00 0.00 4.44
2217 2304 0.598065 AATCTTGCCTGTTCAACCGC 59.402 50.000 0.00 0.00 0.00 5.68
2218 2305 0.537143 ATCTTGCCTGTTCAACCGCA 60.537 50.000 0.00 0.00 0.00 5.69
2219 2306 0.537143 TCTTGCCTGTTCAACCGCAT 60.537 50.000 0.53 0.00 0.00 4.73
2220 2307 1.164411 CTTGCCTGTTCAACCGCATA 58.836 50.000 0.53 0.00 0.00 3.14
2221 2308 1.745087 CTTGCCTGTTCAACCGCATAT 59.255 47.619 0.53 0.00 0.00 1.78
2222 2309 2.700722 TGCCTGTTCAACCGCATATA 57.299 45.000 0.00 0.00 0.00 0.86
2223 2310 3.207265 TGCCTGTTCAACCGCATATAT 57.793 42.857 0.00 0.00 0.00 0.86
2224 2311 3.138304 TGCCTGTTCAACCGCATATATC 58.862 45.455 0.00 0.00 0.00 1.63
2225 2312 2.484264 GCCTGTTCAACCGCATATATCC 59.516 50.000 0.00 0.00 0.00 2.59
2226 2313 3.738982 CCTGTTCAACCGCATATATCCA 58.261 45.455 0.00 0.00 0.00 3.41
2227 2314 4.133820 CCTGTTCAACCGCATATATCCAA 58.866 43.478 0.00 0.00 0.00 3.53
2228 2315 4.024048 CCTGTTCAACCGCATATATCCAAC 60.024 45.833 0.00 0.00 0.00 3.77
2229 2316 3.558006 TGTTCAACCGCATATATCCAACG 59.442 43.478 0.00 0.00 0.00 4.10
2232 2319 2.466867 CCGCATATATCCAACGGCC 58.533 57.895 0.00 0.00 37.05 6.13
2233 2320 1.024579 CCGCATATATCCAACGGCCC 61.025 60.000 0.00 0.00 37.05 5.80
2234 2321 0.321210 CGCATATATCCAACGGCCCA 60.321 55.000 0.00 0.00 0.00 5.36
2235 2322 1.453155 GCATATATCCAACGGCCCAG 58.547 55.000 0.00 0.00 0.00 4.45
2236 2323 1.950484 GCATATATCCAACGGCCCAGG 60.950 57.143 0.00 0.00 0.00 4.45
2237 2324 1.351017 CATATATCCAACGGCCCAGGT 59.649 52.381 0.00 0.00 0.00 4.00
2238 2325 1.053424 TATATCCAACGGCCCAGGTC 58.947 55.000 0.00 0.00 0.00 3.85
2246 2333 4.660938 GGCCCAGGTCGCTTTGGT 62.661 66.667 0.00 0.00 32.40 3.67
2247 2334 3.365265 GCCCAGGTCGCTTTGGTG 61.365 66.667 0.00 0.00 32.40 4.17
2248 2335 2.113139 CCCAGGTCGCTTTGGTGT 59.887 61.111 0.00 0.00 32.40 4.16
2249 2336 1.528309 CCCAGGTCGCTTTGGTGTT 60.528 57.895 0.00 0.00 32.40 3.32
2250 2337 1.106944 CCCAGGTCGCTTTGGTGTTT 61.107 55.000 0.00 0.00 32.40 2.83
2251 2338 1.600023 CCAGGTCGCTTTGGTGTTTA 58.400 50.000 0.00 0.00 0.00 2.01
2252 2339 1.535462 CCAGGTCGCTTTGGTGTTTAG 59.465 52.381 0.00 0.00 0.00 1.85
2253 2340 1.069227 CAGGTCGCTTTGGTGTTTAGC 60.069 52.381 0.00 0.00 0.00 3.09
2254 2341 0.948678 GGTCGCTTTGGTGTTTAGCA 59.051 50.000 0.00 0.00 34.62 3.49
2255 2342 1.539827 GGTCGCTTTGGTGTTTAGCAT 59.460 47.619 0.00 0.00 34.62 3.79
2256 2343 2.030274 GGTCGCTTTGGTGTTTAGCATT 60.030 45.455 0.00 0.00 34.62 3.56
2257 2344 3.189702 GGTCGCTTTGGTGTTTAGCATTA 59.810 43.478 0.00 0.00 34.62 1.90
2258 2345 4.320641 GGTCGCTTTGGTGTTTAGCATTAA 60.321 41.667 0.00 0.00 34.62 1.40
2259 2346 5.216648 GTCGCTTTGGTGTTTAGCATTAAA 58.783 37.500 0.00 0.00 34.62 1.52
2260 2347 5.116528 GTCGCTTTGGTGTTTAGCATTAAAC 59.883 40.000 2.46 2.46 45.71 2.01
2273 2360 8.807581 GTTTAGCATTAAACATGTTTAGCATCC 58.192 33.333 29.44 16.08 45.14 3.51
2274 2361 6.780457 AGCATTAAACATGTTTAGCATCCT 57.220 33.333 29.44 17.56 36.52 3.24
2275 2362 7.174107 AGCATTAAACATGTTTAGCATCCTT 57.826 32.000 29.44 15.37 36.52 3.36
2276 2363 7.614494 AGCATTAAACATGTTTAGCATCCTTT 58.386 30.769 29.44 14.87 36.52 3.11
2277 2364 7.546667 AGCATTAAACATGTTTAGCATCCTTTG 59.453 33.333 29.44 19.03 36.52 2.77
2278 2365 7.201548 GCATTAAACATGTTTAGCATCCTTTGG 60.202 37.037 25.89 11.65 36.52 3.28
2279 2366 3.874392 ACATGTTTAGCATCCTTTGGC 57.126 42.857 0.00 0.00 35.19 4.52
2280 2367 2.497273 ACATGTTTAGCATCCTTTGGCC 59.503 45.455 0.00 0.00 35.19 5.36
2281 2368 2.603075 TGTTTAGCATCCTTTGGCCT 57.397 45.000 3.32 0.00 0.00 5.19
2282 2369 3.730215 TGTTTAGCATCCTTTGGCCTA 57.270 42.857 3.32 0.00 0.00 3.93
2283 2370 4.249638 TGTTTAGCATCCTTTGGCCTAT 57.750 40.909 3.32 0.00 0.00 2.57
2284 2371 4.609301 TGTTTAGCATCCTTTGGCCTATT 58.391 39.130 3.32 0.00 0.00 1.73
2285 2372 5.761205 TGTTTAGCATCCTTTGGCCTATTA 58.239 37.500 3.32 0.00 0.00 0.98
2286 2373 6.191315 TGTTTAGCATCCTTTGGCCTATTAA 58.809 36.000 3.32 0.00 0.00 1.40
2287 2374 6.838612 TGTTTAGCATCCTTTGGCCTATTAAT 59.161 34.615 3.32 0.00 0.00 1.40
2288 2375 8.001875 TGTTTAGCATCCTTTGGCCTATTAATA 58.998 33.333 3.32 0.00 0.00 0.98
2289 2376 7.996098 TTAGCATCCTTTGGCCTATTAATAC 57.004 36.000 3.32 0.00 0.00 1.89
2290 2377 5.325239 AGCATCCTTTGGCCTATTAATACC 58.675 41.667 3.32 0.00 0.00 2.73
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.422796 TGATCTAACTATCTCCCTCGCC 58.577 50.000 0.00 0.00 0.00 5.54
100 109 5.352569 ACAGCAATTTCCTTACGATCTTCTG 59.647 40.000 0.00 0.00 0.00 3.02
101 110 5.352569 CACAGCAATTTCCTTACGATCTTCT 59.647 40.000 0.00 0.00 0.00 2.85
152 161 0.469144 TTTTGAACTCCACAGCCCCC 60.469 55.000 0.00 0.00 0.00 5.40
248 257 8.121086 GGTAGGTATTCGTAAATCAAAAGCTTC 58.879 37.037 0.00 0.00 0.00 3.86
263 272 6.093082 CCAAACTTTGGTTAGGTAGGTATTCG 59.907 42.308 11.92 0.00 45.93 3.34
303 312 6.039717 ACAACAGGTGAGTAGAACGTACTAAA 59.960 38.462 0.00 0.00 0.00 1.85
304 313 5.532406 ACAACAGGTGAGTAGAACGTACTAA 59.468 40.000 0.00 0.00 0.00 2.24
305 314 5.065914 ACAACAGGTGAGTAGAACGTACTA 58.934 41.667 0.00 0.00 0.00 1.82
328 339 7.831691 TGTTTGACCCAAAATAGAGATTTCA 57.168 32.000 0.00 0.00 35.03 2.69
329 341 8.522830 TGATGTTTGACCCAAAATAGAGATTTC 58.477 33.333 0.00 0.00 35.03 2.17
343 355 3.476552 TCTTGTCAGTGATGTTTGACCC 58.523 45.455 0.00 0.00 42.30 4.46
366 381 8.159447 TCCATCAGGGACAGAATTAGATAAATG 58.841 37.037 0.00 0.00 42.15 2.32
390 405 8.948631 TGAGTAGTGATTTTCTTGTATCATCC 57.051 34.615 0.00 0.00 33.69 3.51
419 434 8.253113 CAGTGATTATTTTAAATCTTGTGGGCT 58.747 33.333 0.00 0.00 36.90 5.19
435 450 6.440965 GTCCCCTAGCTATACCAGTGATTATT 59.559 42.308 0.00 0.00 0.00 1.40
462 477 5.052693 TGGAATCATGGTGGAGATAAAGG 57.947 43.478 0.00 0.00 0.00 3.11
535 550 5.771666 CACATATTTTGGGGCTCATATCAGT 59.228 40.000 0.00 0.00 0.00 3.41
540 555 7.499292 CAAAATCACATATTTTGGGGCTCATA 58.501 34.615 13.03 0.00 42.27 2.15
557 572 5.246307 AGCTCCTAGTTGTACCAAAATCAC 58.754 41.667 0.00 0.00 0.00 3.06
571 593 3.327757 TCATTGACACCAAAGCTCCTAGT 59.672 43.478 0.00 0.00 35.67 2.57
578 600 2.622942 TCCTGTTCATTGACACCAAAGC 59.377 45.455 0.00 0.00 35.67 3.51
613 635 4.269183 ACTCACAATGTTCCAACAACTCA 58.731 39.130 0.00 0.00 43.03 3.41
647 669 5.446260 AAGTTAAGGGATCCCGTAATTGT 57.554 39.130 33.22 21.57 40.87 2.71
650 672 5.650703 CACAAAAGTTAAGGGATCCCGTAAT 59.349 40.000 33.22 20.55 40.87 1.89
654 676 2.163613 GCACAAAAGTTAAGGGATCCCG 59.836 50.000 25.48 9.97 41.95 5.14
722 744 1.831106 TCAGGTGACATGTATCCGCTT 59.169 47.619 0.00 0.00 0.00 4.68
869 947 4.302548 GCAGCCTCTGTATCCAAAGATGG 61.303 52.174 0.00 0.00 39.86 3.51
948 1030 7.472945 GCCACAGTATAGTACCACCTTCATATT 60.473 40.741 0.00 0.00 0.00 1.28
967 1049 6.186957 TCATGTCATTAATTAAGGCCACAGT 58.813 36.000 5.01 0.00 0.00 3.55
968 1050 6.698008 TCATGTCATTAATTAAGGCCACAG 57.302 37.500 5.01 0.00 0.00 3.66
969 1051 7.417683 CCAATCATGTCATTAATTAAGGCCACA 60.418 37.037 5.01 6.01 0.00 4.17
1050 1132 4.970711 AGCAACCCTTGATGATAGATGAG 58.029 43.478 0.00 0.00 0.00 2.90
1063 1145 1.048601 TCAACGAGAGAGCAACCCTT 58.951 50.000 0.00 0.00 0.00 3.95
1134 1216 1.277273 CAAGACATGAGAGGGTGAGCA 59.723 52.381 0.00 0.00 0.00 4.26
1189 1271 1.423921 AGGTTCTTTCGGTTGTGGGAT 59.576 47.619 0.00 0.00 0.00 3.85
1194 1276 2.812011 GCACATAGGTTCTTTCGGTTGT 59.188 45.455 0.00 0.00 0.00 3.32
1197 1279 3.418684 AAGCACATAGGTTCTTTCGGT 57.581 42.857 0.00 0.00 30.75 4.69
1234 1316 1.748122 CATGGCTTTCGCTGGCTCT 60.748 57.895 0.00 0.00 36.09 4.09
1240 1322 2.009774 GTCATGTACATGGCTTTCGCT 58.990 47.619 28.97 0.00 40.13 4.93
1283 1365 4.002906 TGACCAATCGTTTTCTAGCACT 57.997 40.909 0.00 0.00 0.00 4.40
1296 1378 4.074970 ACAAGGACAAGACATGACCAATC 58.925 43.478 0.00 0.00 45.05 2.67
1325 1412 5.655488 AGCAGGTACGCATATGAAGATATC 58.345 41.667 6.97 0.00 0.00 1.63
1362 1449 1.271054 GGTGACAGAGCACATCCAACT 60.271 52.381 0.00 0.00 40.52 3.16
1363 1450 1.160137 GGTGACAGAGCACATCCAAC 58.840 55.000 0.00 0.00 40.52 3.77
1364 1451 0.320683 CGGTGACAGAGCACATCCAA 60.321 55.000 0.00 0.00 40.52 3.53
1371 1458 0.900182 ATCCTGACGGTGACAGAGCA 60.900 55.000 0.00 0.00 37.54 4.26
1442 1529 2.874701 CACCATAAAAGAGCTCCGGATG 59.125 50.000 10.93 9.09 0.00 3.51
1459 1546 4.584325 GGCTCCTATCATTTAAATGCACCA 59.416 41.667 21.15 6.54 36.36 4.17
1460 1547 4.584325 TGGCTCCTATCATTTAAATGCACC 59.416 41.667 21.15 14.05 36.36 5.01
1467 1554 7.784073 TGGAAATGAATGGCTCCTATCATTTAA 59.216 33.333 21.22 14.74 46.74 1.52
1472 1559 4.794311 TGGAAATGAATGGCTCCTATCA 57.206 40.909 0.00 0.00 0.00 2.15
1473 1560 5.771666 TGATTGGAAATGAATGGCTCCTATC 59.228 40.000 4.95 4.95 39.32 2.08
1477 1564 4.950205 ATGATTGGAAATGAATGGCTCC 57.050 40.909 0.00 0.00 0.00 4.70
1483 1570 8.086143 AGTCCATCAAATGATTGGAAATGAAT 57.914 30.769 12.89 0.00 35.27 2.57
1541 1628 8.510505 GCAGAGAGAAGAAAACATAATGTCTTT 58.489 33.333 0.00 0.00 30.56 2.52
1542 1629 7.882271 AGCAGAGAGAAGAAAACATAATGTCTT 59.118 33.333 0.00 0.00 33.07 3.01
1543 1630 7.393216 AGCAGAGAGAAGAAAACATAATGTCT 58.607 34.615 0.00 0.00 0.00 3.41
1544 1631 7.463913 CGAGCAGAGAGAAGAAAACATAATGTC 60.464 40.741 0.00 0.00 0.00 3.06
1545 1632 6.312426 CGAGCAGAGAGAAGAAAACATAATGT 59.688 38.462 0.00 0.00 0.00 2.71
1546 1633 6.533012 TCGAGCAGAGAGAAGAAAACATAATG 59.467 38.462 0.00 0.00 0.00 1.90
1547 1634 6.634805 TCGAGCAGAGAGAAGAAAACATAAT 58.365 36.000 0.00 0.00 0.00 1.28
1548 1635 6.025749 TCGAGCAGAGAGAAGAAAACATAA 57.974 37.500 0.00 0.00 0.00 1.90
1549 1636 5.644977 TCGAGCAGAGAGAAGAAAACATA 57.355 39.130 0.00 0.00 0.00 2.29
1550 1637 4.527509 TCGAGCAGAGAGAAGAAAACAT 57.472 40.909 0.00 0.00 0.00 2.71
1551 1638 4.322080 TTCGAGCAGAGAGAAGAAAACA 57.678 40.909 0.00 0.00 0.00 2.83
1552 1639 4.688413 ACATTCGAGCAGAGAGAAGAAAAC 59.312 41.667 0.00 0.00 0.00 2.43
1553 1640 4.687948 CACATTCGAGCAGAGAGAAGAAAA 59.312 41.667 0.00 0.00 0.00 2.29
1554 1641 4.021981 TCACATTCGAGCAGAGAGAAGAAA 60.022 41.667 0.00 0.00 0.00 2.52
1555 1642 3.507622 TCACATTCGAGCAGAGAGAAGAA 59.492 43.478 0.00 0.00 0.00 2.52
1556 1643 3.084786 TCACATTCGAGCAGAGAGAAGA 58.915 45.455 0.00 0.00 0.00 2.87
1557 1644 3.500558 TCACATTCGAGCAGAGAGAAG 57.499 47.619 0.00 0.00 0.00 2.85
1558 1645 5.278709 GGATATCACATTCGAGCAGAGAGAA 60.279 44.000 4.83 0.00 0.00 2.87
1559 1646 4.217334 GGATATCACATTCGAGCAGAGAGA 59.783 45.833 4.83 0.00 0.00 3.10
1560 1647 4.218200 AGGATATCACATTCGAGCAGAGAG 59.782 45.833 4.83 0.00 0.00 3.20
1561 1648 4.148079 AGGATATCACATTCGAGCAGAGA 58.852 43.478 4.83 0.00 0.00 3.10
1562 1649 4.517952 AGGATATCACATTCGAGCAGAG 57.482 45.455 4.83 0.00 0.00 3.35
1563 1650 4.586421 AGAAGGATATCACATTCGAGCAGA 59.414 41.667 4.83 0.00 36.02 4.26
1564 1651 4.880759 AGAAGGATATCACATTCGAGCAG 58.119 43.478 4.83 0.00 36.02 4.24
1565 1652 4.944619 AGAAGGATATCACATTCGAGCA 57.055 40.909 4.83 0.00 36.02 4.26
1566 1653 4.862018 GCTAGAAGGATATCACATTCGAGC 59.138 45.833 21.87 21.87 45.49 5.03
1567 1654 6.018589 TGCTAGAAGGATATCACATTCGAG 57.981 41.667 4.83 11.34 36.77 4.04
1568 1655 5.770162 TCTGCTAGAAGGATATCACATTCGA 59.230 40.000 4.83 1.88 36.02 3.71
1569 1656 6.018589 TCTGCTAGAAGGATATCACATTCG 57.981 41.667 4.83 0.00 36.02 3.34
1570 1657 7.225784 TCTCTGCTAGAAGGATATCACATTC 57.774 40.000 4.83 5.84 0.00 2.67
1571 1658 7.795534 ATCTCTGCTAGAAGGATATCACATT 57.204 36.000 4.83 0.00 37.89 2.71
1572 1659 7.795534 AATCTCTGCTAGAAGGATATCACAT 57.204 36.000 4.83 0.00 37.89 3.21
1573 1660 7.609097 AAATCTCTGCTAGAAGGATATCACA 57.391 36.000 4.83 0.00 37.89 3.58
1576 1663 9.097257 GCATAAAATCTCTGCTAGAAGGATATC 57.903 37.037 0.00 0.00 37.89 1.63
1577 1664 8.046107 GGCATAAAATCTCTGCTAGAAGGATAT 58.954 37.037 0.00 0.00 37.89 1.63
1578 1665 7.236432 AGGCATAAAATCTCTGCTAGAAGGATA 59.764 37.037 0.00 0.00 37.89 2.59
1579 1666 6.044171 AGGCATAAAATCTCTGCTAGAAGGAT 59.956 38.462 0.00 0.00 37.89 3.24
1580 1667 5.367937 AGGCATAAAATCTCTGCTAGAAGGA 59.632 40.000 0.00 0.00 37.89 3.36
1581 1668 5.619220 AGGCATAAAATCTCTGCTAGAAGG 58.381 41.667 0.00 0.00 37.89 3.46
1582 1669 5.700373 GGAGGCATAAAATCTCTGCTAGAAG 59.300 44.000 0.00 0.00 37.89 2.85
1583 1670 5.367937 AGGAGGCATAAAATCTCTGCTAGAA 59.632 40.000 0.00 0.00 37.89 2.10
1584 1671 4.904251 AGGAGGCATAAAATCTCTGCTAGA 59.096 41.667 0.00 0.00 39.02 2.43
1585 1672 5.226194 AGGAGGCATAAAATCTCTGCTAG 57.774 43.478 0.00 0.00 36.18 3.42
1586 1673 6.942163 ATAGGAGGCATAAAATCTCTGCTA 57.058 37.500 0.00 0.00 36.18 3.49
1587 1674 5.839517 ATAGGAGGCATAAAATCTCTGCT 57.160 39.130 0.00 0.00 36.18 4.24
1588 1675 5.121454 CGAATAGGAGGCATAAAATCTCTGC 59.879 44.000 0.00 0.00 35.16 4.26
1589 1676 6.459066 TCGAATAGGAGGCATAAAATCTCTG 58.541 40.000 0.00 0.00 0.00 3.35
1590 1677 6.672266 TCGAATAGGAGGCATAAAATCTCT 57.328 37.500 0.00 0.00 0.00 3.10
1591 1678 6.128418 GCTTCGAATAGGAGGCATAAAATCTC 60.128 42.308 0.00 0.00 38.73 2.75
1592 1679 5.703130 GCTTCGAATAGGAGGCATAAAATCT 59.297 40.000 0.00 0.00 38.73 2.40
1593 1680 5.470098 TGCTTCGAATAGGAGGCATAAAATC 59.530 40.000 0.00 0.00 43.08 2.17
1594 1681 5.376625 TGCTTCGAATAGGAGGCATAAAAT 58.623 37.500 0.00 0.00 43.08 1.82
1595 1682 4.776349 TGCTTCGAATAGGAGGCATAAAA 58.224 39.130 0.00 0.00 43.08 1.52
1596 1683 4.415881 TGCTTCGAATAGGAGGCATAAA 57.584 40.909 0.00 0.00 43.08 1.40
1597 1684 4.141711 ACTTGCTTCGAATAGGAGGCATAA 60.142 41.667 8.14 0.00 46.49 1.90
1598 1685 3.388024 ACTTGCTTCGAATAGGAGGCATA 59.612 43.478 8.14 0.75 46.49 3.14
1599 1686 2.171448 ACTTGCTTCGAATAGGAGGCAT 59.829 45.455 8.14 0.00 46.49 4.40
1600 1687 1.555075 ACTTGCTTCGAATAGGAGGCA 59.445 47.619 0.00 0.06 45.75 4.75
1601 1688 2.205911 GACTTGCTTCGAATAGGAGGC 58.794 52.381 0.00 0.00 39.28 4.70
1602 1689 2.464865 CGACTTGCTTCGAATAGGAGG 58.535 52.381 0.00 0.00 41.78 4.30
1603 1690 2.159226 ACCGACTTGCTTCGAATAGGAG 60.159 50.000 0.00 0.00 41.78 3.69
1604 1691 1.822990 ACCGACTTGCTTCGAATAGGA 59.177 47.619 0.00 0.00 41.78 2.94
1605 1692 1.927174 CACCGACTTGCTTCGAATAGG 59.073 52.381 0.00 0.00 41.78 2.57
1606 1693 1.324736 GCACCGACTTGCTTCGAATAG 59.675 52.381 0.00 0.00 41.78 1.73
1607 1694 1.355971 GCACCGACTTGCTTCGAATA 58.644 50.000 0.00 0.00 41.78 1.75
1608 1695 2.162716 GCACCGACTTGCTTCGAAT 58.837 52.632 0.00 0.00 41.78 3.34
1609 1696 3.637714 GCACCGACTTGCTTCGAA 58.362 55.556 0.00 0.00 41.78 3.71
1615 1702 4.395583 GCTGCAGCACCGACTTGC 62.396 66.667 33.36 2.16 43.34 4.01
1616 1703 4.081030 CGCTGCAGCACCGACTTG 62.081 66.667 36.03 15.08 42.21 3.16
1632 1719 3.039202 GACACCAAAGGCGATGGCG 62.039 63.158 10.94 5.01 41.89 5.69
1633 1720 0.392461 TAGACACCAAAGGCGATGGC 60.392 55.000 10.94 0.00 41.89 4.40
1634 1721 2.009774 CTTAGACACCAAAGGCGATGG 58.990 52.381 9.66 9.66 43.84 3.51
1635 1722 2.673368 GTCTTAGACACCAAAGGCGATG 59.327 50.000 7.59 0.00 32.09 3.84
1636 1723 2.973945 GTCTTAGACACCAAAGGCGAT 58.026 47.619 7.59 0.00 32.09 4.58
1637 1724 2.450609 GTCTTAGACACCAAAGGCGA 57.549 50.000 7.59 0.00 32.09 5.54
1638 1725 1.068474 CGTCTTAGACACCAAAGGCG 58.932 55.000 13.14 0.00 43.40 5.52
1639 1726 1.439679 CCGTCTTAGACACCAAAGGC 58.560 55.000 13.14 0.00 32.09 4.35
1640 1727 1.439679 GCCGTCTTAGACACCAAAGG 58.560 55.000 13.14 5.37 32.09 3.11
1641 1728 1.068474 CGCCGTCTTAGACACCAAAG 58.932 55.000 13.14 0.00 32.09 2.77
1642 1729 0.675083 TCGCCGTCTTAGACACCAAA 59.325 50.000 13.14 0.00 32.09 3.28
1643 1730 0.038892 GTCGCCGTCTTAGACACCAA 60.039 55.000 13.14 0.00 35.19 3.67
1644 1731 1.174078 TGTCGCCGTCTTAGACACCA 61.174 55.000 13.14 0.00 39.63 4.17
1645 1732 1.582968 TGTCGCCGTCTTAGACACC 59.417 57.895 13.14 1.48 39.63 4.16
1647 1734 1.208358 CGTGTCGCCGTCTTAGACA 59.792 57.895 13.14 0.00 41.90 3.41
1648 1735 4.053067 CGTGTCGCCGTCTTAGAC 57.947 61.111 1.64 1.64 35.61 2.59
1660 1747 2.126031 GACCTTCCCGAGCGTGTC 60.126 66.667 0.00 0.00 0.00 3.67
1661 1748 3.692406 GGACCTTCCCGAGCGTGT 61.692 66.667 0.00 0.00 0.00 4.49
1662 1749 3.691342 TGGACCTTCCCGAGCGTG 61.691 66.667 0.00 0.00 35.03 5.34
1663 1750 3.692406 GTGGACCTTCCCGAGCGT 61.692 66.667 0.00 0.00 35.03 5.07
1664 1751 4.452733 GGTGGACCTTCCCGAGCG 62.453 72.222 0.00 0.00 35.03 5.03
1665 1752 2.670148 ATGGTGGACCTTCCCGAGC 61.670 63.158 0.00 0.00 35.03 5.03
1666 1753 1.221840 CATGGTGGACCTTCCCGAG 59.778 63.158 0.00 0.00 35.03 4.63
1667 1754 1.131303 AACATGGTGGACCTTCCCGA 61.131 55.000 0.00 0.00 35.03 5.14
1668 1755 0.960364 CAACATGGTGGACCTTCCCG 60.960 60.000 1.63 0.00 35.03 5.14
1669 1756 0.404040 TCAACATGGTGGACCTTCCC 59.596 55.000 11.68 0.00 35.03 3.97
1670 1757 2.094675 CATCAACATGGTGGACCTTCC 58.905 52.381 11.68 0.00 36.96 3.46
1671 1758 2.749621 GACATCAACATGGTGGACCTTC 59.250 50.000 11.68 0.00 31.38 3.46
1672 1759 2.795329 GACATCAACATGGTGGACCTT 58.205 47.619 11.68 0.00 31.38 3.50
1673 1760 1.339055 CGACATCAACATGGTGGACCT 60.339 52.381 11.68 0.00 31.38 3.85
1674 1761 1.086696 CGACATCAACATGGTGGACC 58.913 55.000 11.68 0.00 31.38 4.46
1675 1762 2.093306 TCGACATCAACATGGTGGAC 57.907 50.000 11.68 0.00 31.38 4.02
1676 1763 3.270027 GAATCGACATCAACATGGTGGA 58.730 45.455 11.68 0.00 31.38 4.02
1677 1764 3.009026 TGAATCGACATCAACATGGTGG 58.991 45.455 11.68 0.00 31.38 4.61
1678 1765 3.486375 GCTGAATCGACATCAACATGGTG 60.486 47.826 3.69 3.69 33.91 4.17
1679 1766 2.679837 GCTGAATCGACATCAACATGGT 59.320 45.455 0.00 0.00 33.82 3.55
1680 1767 2.032550 GGCTGAATCGACATCAACATGG 59.967 50.000 0.00 0.00 33.82 3.66
1681 1768 2.679336 TGGCTGAATCGACATCAACATG 59.321 45.455 4.50 0.00 35.92 3.21
1682 1769 2.989909 TGGCTGAATCGACATCAACAT 58.010 42.857 4.50 0.00 0.00 2.71
1683 1770 2.470983 TGGCTGAATCGACATCAACA 57.529 45.000 4.50 4.29 0.00 3.33
1684 1771 2.540361 GCATGGCTGAATCGACATCAAC 60.540 50.000 4.50 0.50 27.63 3.18
1685 1772 1.672363 GCATGGCTGAATCGACATCAA 59.328 47.619 4.50 0.00 27.63 2.57
1686 1773 1.302366 GCATGGCTGAATCGACATCA 58.698 50.000 0.00 3.04 27.63 3.07
1687 1774 0.590195 GGCATGGCTGAATCGACATC 59.410 55.000 12.86 0.00 27.63 3.06
1688 1775 0.107066 TGGCATGGCTGAATCGACAT 60.107 50.000 21.08 0.00 31.24 3.06
1689 1776 0.107066 ATGGCATGGCTGAATCGACA 60.107 50.000 21.08 0.00 0.00 4.35
1690 1777 0.309922 CATGGCATGGCTGAATCGAC 59.690 55.000 19.80 0.00 0.00 4.20
1691 1778 0.107066 ACATGGCATGGCTGAATCGA 60.107 50.000 29.49 0.00 33.60 3.59
1692 1779 0.030235 CACATGGCATGGCTGAATCG 59.970 55.000 29.49 3.31 33.60 3.34
1693 1780 0.249322 GCACATGGCATGGCTGAATC 60.249 55.000 29.49 5.60 43.97 2.52
1694 1781 1.820581 GCACATGGCATGGCTGAAT 59.179 52.632 29.49 6.31 43.97 2.57
1695 1782 3.290567 GCACATGGCATGGCTGAA 58.709 55.556 29.49 0.00 43.97 3.02
1706 1793 2.182284 CCAACGGCCATGCACATG 59.818 61.111 2.24 3.56 38.51 3.21
1707 1794 2.035469 TCCAACGGCCATGCACAT 59.965 55.556 2.24 0.00 0.00 3.21
1708 1795 2.983030 GTCCAACGGCCATGCACA 60.983 61.111 2.24 0.00 0.00 4.57
1709 1796 4.101790 CGTCCAACGGCCATGCAC 62.102 66.667 2.24 0.00 38.08 4.57
1730 1817 4.974721 ACCAGTGCCTTTGCCCCG 62.975 66.667 0.00 0.00 36.33 5.73
1731 1818 3.305516 CACCAGTGCCTTTGCCCC 61.306 66.667 0.00 0.00 36.33 5.80
1732 1819 3.305516 CCACCAGTGCCTTTGCCC 61.306 66.667 0.00 0.00 36.33 5.36
1733 1820 3.305516 CCCACCAGTGCCTTTGCC 61.306 66.667 0.00 0.00 36.33 4.52
1734 1821 3.994853 GCCCACCAGTGCCTTTGC 61.995 66.667 0.00 0.00 38.26 3.68
1735 1822 2.521465 TGCCCACCAGTGCCTTTG 60.521 61.111 0.00 0.00 0.00 2.77
1736 1823 2.521708 GTGCCCACCAGTGCCTTT 60.522 61.111 0.00 0.00 0.00 3.11
1746 1833 3.446570 GCTGCTCATGGTGCCCAC 61.447 66.667 8.67 0.00 35.80 4.61
1747 1834 3.654143 AGCTGCTCATGGTGCCCA 61.654 61.111 0.00 0.00 38.19 5.36
1748 1835 3.138798 CAGCTGCTCATGGTGCCC 61.139 66.667 0.00 1.75 0.00 5.36
1749 1836 2.045634 TCAGCTGCTCATGGTGCC 60.046 61.111 9.47 0.00 33.48 5.01
1750 1837 2.113433 CCTCAGCTGCTCATGGTGC 61.113 63.158 9.47 0.00 33.48 5.01
1751 1838 1.451567 CCCTCAGCTGCTCATGGTG 60.452 63.158 9.47 0.00 0.00 4.17
1752 1839 1.614525 TCCCTCAGCTGCTCATGGT 60.615 57.895 9.47 0.00 0.00 3.55
1753 1840 1.146485 CTCCCTCAGCTGCTCATGG 59.854 63.158 9.47 4.70 0.00 3.66
1754 1841 0.759959 ATCTCCCTCAGCTGCTCATG 59.240 55.000 9.47 0.00 0.00 3.07
1755 1842 1.417145 GAATCTCCCTCAGCTGCTCAT 59.583 52.381 9.47 0.00 0.00 2.90
1756 1843 0.829333 GAATCTCCCTCAGCTGCTCA 59.171 55.000 9.47 0.00 0.00 4.26
1757 1844 0.829333 TGAATCTCCCTCAGCTGCTC 59.171 55.000 9.47 0.00 0.00 4.26
1758 1845 0.540923 GTGAATCTCCCTCAGCTGCT 59.459 55.000 9.47 0.00 0.00 4.24
1759 1846 0.809241 CGTGAATCTCCCTCAGCTGC 60.809 60.000 9.47 0.00 0.00 5.25
1760 1847 0.534412 ACGTGAATCTCCCTCAGCTG 59.466 55.000 7.63 7.63 0.00 4.24
1761 1848 0.820871 GACGTGAATCTCCCTCAGCT 59.179 55.000 0.00 0.00 0.00 4.24
1762 1849 0.526524 CGACGTGAATCTCCCTCAGC 60.527 60.000 0.00 0.00 0.00 4.26
1763 1850 1.095600 TCGACGTGAATCTCCCTCAG 58.904 55.000 0.00 0.00 0.00 3.35
1764 1851 1.405463 CATCGACGTGAATCTCCCTCA 59.595 52.381 0.00 0.00 0.00 3.86
1765 1852 1.405821 ACATCGACGTGAATCTCCCTC 59.594 52.381 0.00 0.00 0.00 4.30
1766 1853 1.475403 ACATCGACGTGAATCTCCCT 58.525 50.000 0.00 0.00 0.00 4.20
1767 1854 2.859032 GCTACATCGACGTGAATCTCCC 60.859 54.545 0.00 0.00 0.00 4.30
1768 1855 2.386249 GCTACATCGACGTGAATCTCC 58.614 52.381 0.00 0.00 0.00 3.71
1769 1856 2.037649 CGCTACATCGACGTGAATCTC 58.962 52.381 0.00 0.00 0.00 2.75
1770 1857 1.268589 CCGCTACATCGACGTGAATCT 60.269 52.381 0.00 0.00 0.00 2.40
1771 1858 1.121240 CCGCTACATCGACGTGAATC 58.879 55.000 0.00 0.00 0.00 2.52
1772 1859 0.870307 GCCGCTACATCGACGTGAAT 60.870 55.000 0.00 0.00 0.00 2.57
1773 1860 1.515519 GCCGCTACATCGACGTGAA 60.516 57.895 0.00 0.00 0.00 3.18
1774 1861 2.101575 GCCGCTACATCGACGTGA 59.898 61.111 0.00 0.00 0.00 4.35
1775 1862 2.202557 TGCCGCTACATCGACGTG 60.203 61.111 0.00 0.00 0.00 4.49
1776 1863 2.102357 CTGCCGCTACATCGACGT 59.898 61.111 0.00 0.00 0.00 4.34
1777 1864 3.323136 GCTGCCGCTACATCGACG 61.323 66.667 0.00 0.00 0.00 5.12
1778 1865 2.105128 AGCTGCCGCTACATCGAC 59.895 61.111 0.00 0.00 46.79 4.20
1787 1874 2.907897 ATAGGTCACGAAGCTGCCGC 62.908 60.000 8.47 0.00 36.91 6.53
1788 1875 1.141881 ATAGGTCACGAAGCTGCCG 59.858 57.895 7.16 7.16 36.91 5.69
1789 1876 0.811616 CCATAGGTCACGAAGCTGCC 60.812 60.000 0.00 0.00 36.91 4.85
1790 1877 0.811616 CCCATAGGTCACGAAGCTGC 60.812 60.000 0.00 0.00 36.91 5.25
1791 1878 0.537188 ACCCATAGGTCACGAAGCTG 59.463 55.000 0.00 0.00 46.45 4.24
1792 1879 2.992476 ACCCATAGGTCACGAAGCT 58.008 52.632 0.00 0.00 46.45 3.74
1802 1889 2.097466 GCATCACGAAACAACCCATAGG 59.903 50.000 0.00 0.00 40.04 2.57
1803 1890 2.097466 GGCATCACGAAACAACCCATAG 59.903 50.000 0.00 0.00 0.00 2.23
1804 1891 2.088423 GGCATCACGAAACAACCCATA 58.912 47.619 0.00 0.00 0.00 2.74
1805 1892 0.887933 GGCATCACGAAACAACCCAT 59.112 50.000 0.00 0.00 0.00 4.00
1806 1893 1.175983 GGGCATCACGAAACAACCCA 61.176 55.000 0.00 0.00 35.84 4.51
1807 1894 1.175983 TGGGCATCACGAAACAACCC 61.176 55.000 0.00 0.00 36.36 4.11
1808 1895 0.671251 TTGGGCATCACGAAACAACC 59.329 50.000 0.00 0.00 0.00 3.77
1809 1896 1.336755 AGTTGGGCATCACGAAACAAC 59.663 47.619 0.00 0.00 38.67 3.32
1810 1897 1.336440 CAGTTGGGCATCACGAAACAA 59.664 47.619 0.00 0.00 0.00 2.83
1811 1898 0.950836 CAGTTGGGCATCACGAAACA 59.049 50.000 0.00 0.00 0.00 2.83
1812 1899 0.240945 CCAGTTGGGCATCACGAAAC 59.759 55.000 0.00 0.00 0.00 2.78
1813 1900 0.109532 TCCAGTTGGGCATCACGAAA 59.890 50.000 0.00 0.00 36.21 3.46
1814 1901 0.321564 CTCCAGTTGGGCATCACGAA 60.322 55.000 0.00 0.00 36.21 3.85
1815 1902 1.296392 CTCCAGTTGGGCATCACGA 59.704 57.895 0.00 0.00 36.21 4.35
1816 1903 2.401766 GCTCCAGTTGGGCATCACG 61.402 63.158 0.00 0.00 36.21 4.35
1817 1904 1.001641 AGCTCCAGTTGGGCATCAC 60.002 57.895 12.19 0.00 34.96 3.06
1818 1905 1.300963 GAGCTCCAGTTGGGCATCA 59.699 57.895 0.87 0.00 34.96 3.07
1819 1906 1.452833 GGAGCTCCAGTTGGGCATC 60.453 63.158 28.43 0.00 34.96 3.91
1820 1907 2.679716 GGAGCTCCAGTTGGGCAT 59.320 61.111 28.43 0.00 34.96 4.40
1821 1908 3.650950 GGGAGCTCCAGTTGGGCA 61.651 66.667 33.29 0.00 37.91 5.36
1822 1909 3.650950 TGGGAGCTCCAGTTGGGC 61.651 66.667 33.29 15.00 41.46 5.36
1829 1916 2.269023 TCTCTTCAATTGGGAGCTCCA 58.731 47.619 33.29 15.46 45.43 3.86
1830 1917 3.356529 TTCTCTTCAATTGGGAGCTCC 57.643 47.619 25.59 25.59 0.00 4.70
1831 1918 3.631227 CCATTCTCTTCAATTGGGAGCTC 59.369 47.826 18.18 4.71 0.00 4.09
1832 1919 3.267812 TCCATTCTCTTCAATTGGGAGCT 59.732 43.478 18.18 0.00 0.00 4.09
1833 1920 3.624777 TCCATTCTCTTCAATTGGGAGC 58.375 45.455 18.18 0.00 0.00 4.70
1834 1921 3.631227 GCTCCATTCTCTTCAATTGGGAG 59.369 47.826 17.38 17.38 42.73 4.30
1835 1922 3.624777 GCTCCATTCTCTTCAATTGGGA 58.375 45.455 5.42 3.93 0.00 4.37
1836 1923 2.692041 GGCTCCATTCTCTTCAATTGGG 59.308 50.000 5.42 0.00 0.00 4.12
1837 1924 2.692041 GGGCTCCATTCTCTTCAATTGG 59.308 50.000 5.42 0.00 0.00 3.16
1838 1925 3.359033 TGGGCTCCATTCTCTTCAATTG 58.641 45.455 0.00 0.00 0.00 2.32
1839 1926 3.267812 TCTGGGCTCCATTCTCTTCAATT 59.732 43.478 0.00 0.00 30.82 2.32
1840 1927 2.848694 TCTGGGCTCCATTCTCTTCAAT 59.151 45.455 0.00 0.00 30.82 2.57
1841 1928 2.269023 TCTGGGCTCCATTCTCTTCAA 58.731 47.619 0.00 0.00 30.82 2.69
1842 1929 1.956869 TCTGGGCTCCATTCTCTTCA 58.043 50.000 0.00 0.00 30.82 3.02
1843 1930 3.574354 ATTCTGGGCTCCATTCTCTTC 57.426 47.619 0.00 0.00 30.82 2.87
1844 1931 4.328118 AAATTCTGGGCTCCATTCTCTT 57.672 40.909 0.00 0.00 30.82 2.85
1845 1932 4.021916 CAAAATTCTGGGCTCCATTCTCT 58.978 43.478 0.00 0.00 30.82 3.10
1846 1933 3.131755 CCAAAATTCTGGGCTCCATTCTC 59.868 47.826 0.00 0.00 30.82 2.87
1847 1934 3.102204 CCAAAATTCTGGGCTCCATTCT 58.898 45.455 0.00 0.00 30.82 2.40
1848 1935 3.099141 TCCAAAATTCTGGGCTCCATTC 58.901 45.455 0.00 0.00 37.06 2.67
1849 1936 3.188880 TCCAAAATTCTGGGCTCCATT 57.811 42.857 0.00 0.00 37.06 3.16
1850 1937 2.925966 TCCAAAATTCTGGGCTCCAT 57.074 45.000 0.00 0.00 37.06 3.41
1851 1938 2.109834 TCTTCCAAAATTCTGGGCTCCA 59.890 45.455 0.00 0.00 37.06 3.86
1852 1939 2.807676 TCTTCCAAAATTCTGGGCTCC 58.192 47.619 0.00 0.00 37.06 4.70
1853 1940 3.131755 CCATCTTCCAAAATTCTGGGCTC 59.868 47.826 0.00 0.00 37.06 4.70
1854 1941 3.102204 CCATCTTCCAAAATTCTGGGCT 58.898 45.455 0.00 0.00 37.06 5.19
1855 1942 2.419159 GCCATCTTCCAAAATTCTGGGC 60.419 50.000 0.00 0.00 37.06 5.36
1856 1943 2.833338 TGCCATCTTCCAAAATTCTGGG 59.167 45.455 0.00 0.00 37.06 4.45
1857 1944 4.020839 AGTTGCCATCTTCCAAAATTCTGG 60.021 41.667 0.00 0.00 37.87 3.86
1858 1945 5.143376 AGTTGCCATCTTCCAAAATTCTG 57.857 39.130 0.00 0.00 0.00 3.02
1859 1946 5.541484 AGAAGTTGCCATCTTCCAAAATTCT 59.459 36.000 11.05 0.00 41.27 2.40
1860 1947 5.787380 AGAAGTTGCCATCTTCCAAAATTC 58.213 37.500 11.05 0.00 41.27 2.17
1861 1948 5.813513 AGAAGTTGCCATCTTCCAAAATT 57.186 34.783 11.05 0.00 41.27 1.82
1862 1949 5.565439 CGAAGAAGTTGCCATCTTCCAAAAT 60.565 40.000 11.05 0.00 45.59 1.82
1863 1950 4.261572 CGAAGAAGTTGCCATCTTCCAAAA 60.262 41.667 11.05 0.00 45.59 2.44
1864 1951 3.253188 CGAAGAAGTTGCCATCTTCCAAA 59.747 43.478 11.05 0.00 45.59 3.28
1865 1952 2.813754 CGAAGAAGTTGCCATCTTCCAA 59.186 45.455 11.05 0.00 45.59 3.53
1866 1953 2.224523 ACGAAGAAGTTGCCATCTTCCA 60.225 45.455 11.05 0.00 45.59 3.53
1867 1954 2.416893 GACGAAGAAGTTGCCATCTTCC 59.583 50.000 11.05 0.00 45.59 3.46
1868 1955 2.092838 CGACGAAGAAGTTGCCATCTTC 59.907 50.000 7.32 7.32 45.14 2.87
1869 1956 2.069273 CGACGAAGAAGTTGCCATCTT 58.931 47.619 0.00 0.00 38.56 2.40
1870 1957 1.272490 TCGACGAAGAAGTTGCCATCT 59.728 47.619 0.00 0.00 0.00 2.90
1871 1958 1.710013 TCGACGAAGAAGTTGCCATC 58.290 50.000 0.00 0.00 0.00 3.51
1872 1959 2.002586 CATCGACGAAGAAGTTGCCAT 58.997 47.619 0.00 0.00 0.00 4.40
1873 1960 1.428448 CATCGACGAAGAAGTTGCCA 58.572 50.000 0.00 0.00 0.00 4.92
1874 1961 0.095417 GCATCGACGAAGAAGTTGCC 59.905 55.000 0.00 0.00 31.42 4.52
1875 1962 0.095417 GGCATCGACGAAGAAGTTGC 59.905 55.000 0.00 5.94 34.54 4.17
1876 1963 0.721718 GGGCATCGACGAAGAAGTTG 59.278 55.000 0.00 0.00 0.00 3.16
1877 1964 0.608640 AGGGCATCGACGAAGAAGTT 59.391 50.000 0.00 0.00 0.00 2.66
1878 1965 0.608640 AAGGGCATCGACGAAGAAGT 59.391 50.000 0.00 0.00 0.00 3.01
1879 1966 2.099263 TCTAAGGGCATCGACGAAGAAG 59.901 50.000 0.00 0.00 0.00 2.85
1880 1967 2.097036 TCTAAGGGCATCGACGAAGAA 58.903 47.619 0.00 0.00 0.00 2.52
1881 1968 1.758936 TCTAAGGGCATCGACGAAGA 58.241 50.000 0.00 0.00 0.00 2.87
1882 1969 2.194271 GTTCTAAGGGCATCGACGAAG 58.806 52.381 0.00 0.00 0.00 3.79
1883 1970 1.134907 GGTTCTAAGGGCATCGACGAA 60.135 52.381 0.00 0.00 0.00 3.85
1884 1971 0.458669 GGTTCTAAGGGCATCGACGA 59.541 55.000 0.00 0.00 0.00 4.20
1885 1972 0.174845 TGGTTCTAAGGGCATCGACG 59.825 55.000 0.00 0.00 0.00 5.12
1886 1973 2.396590 TTGGTTCTAAGGGCATCGAC 57.603 50.000 0.00 0.00 0.00 4.20
1887 1974 3.964688 TCTATTGGTTCTAAGGGCATCGA 59.035 43.478 0.00 0.00 0.00 3.59
1888 1975 4.336889 TCTATTGGTTCTAAGGGCATCG 57.663 45.455 0.00 0.00 0.00 3.84
1889 1976 5.006386 CCATCTATTGGTTCTAAGGGCATC 58.994 45.833 0.00 0.00 40.99 3.91
1890 1977 4.990526 CCATCTATTGGTTCTAAGGGCAT 58.009 43.478 0.00 0.00 40.99 4.40
1891 1978 4.437682 CCATCTATTGGTTCTAAGGGCA 57.562 45.455 0.00 0.00 40.99 5.36
1903 1990 6.479331 CACTTCAGATCTCACACCATCTATTG 59.521 42.308 0.00 0.00 0.00 1.90
1904 1991 6.155910 ACACTTCAGATCTCACACCATCTATT 59.844 38.462 0.00 0.00 0.00 1.73
1905 1992 5.660417 ACACTTCAGATCTCACACCATCTAT 59.340 40.000 0.00 0.00 0.00 1.98
1906 1993 5.019470 ACACTTCAGATCTCACACCATCTA 58.981 41.667 0.00 0.00 0.00 1.98
1907 1994 3.837146 ACACTTCAGATCTCACACCATCT 59.163 43.478 0.00 0.00 0.00 2.90
1908 1995 3.931468 CACACTTCAGATCTCACACCATC 59.069 47.826 0.00 0.00 0.00 3.51
1909 1996 3.580022 TCACACTTCAGATCTCACACCAT 59.420 43.478 0.00 0.00 0.00 3.55
1910 1997 2.965147 TCACACTTCAGATCTCACACCA 59.035 45.455 0.00 0.00 0.00 4.17
1911 1998 3.667497 TCACACTTCAGATCTCACACC 57.333 47.619 0.00 0.00 0.00 4.16
1912 1999 3.856521 CGATCACACTTCAGATCTCACAC 59.143 47.826 0.00 0.00 38.75 3.82
1913 2000 3.758554 TCGATCACACTTCAGATCTCACA 59.241 43.478 0.00 0.00 38.75 3.58
1914 2001 4.101942 GTCGATCACACTTCAGATCTCAC 58.898 47.826 0.00 0.00 38.75 3.51
1915 2002 4.013050 AGTCGATCACACTTCAGATCTCA 58.987 43.478 0.00 0.00 38.75 3.27
1916 2003 4.142491 ACAGTCGATCACACTTCAGATCTC 60.142 45.833 0.00 0.00 38.75 2.75
1917 2004 3.761218 ACAGTCGATCACACTTCAGATCT 59.239 43.478 0.00 0.00 38.75 2.75
1918 2005 4.103365 ACAGTCGATCACACTTCAGATC 57.897 45.455 0.00 0.00 37.79 2.75
1919 2006 4.240888 CAACAGTCGATCACACTTCAGAT 58.759 43.478 0.00 0.00 0.00 2.90
1920 2007 3.552890 CCAACAGTCGATCACACTTCAGA 60.553 47.826 0.00 0.00 0.00 3.27
1921 2008 2.733552 CCAACAGTCGATCACACTTCAG 59.266 50.000 0.00 0.00 0.00 3.02
1922 2009 2.364002 TCCAACAGTCGATCACACTTCA 59.636 45.455 0.00 0.00 0.00 3.02
1923 2010 3.026630 TCCAACAGTCGATCACACTTC 57.973 47.619 0.00 0.00 0.00 3.01
1924 2011 3.329386 CATCCAACAGTCGATCACACTT 58.671 45.455 0.00 0.00 0.00 3.16
1925 2012 2.354103 CCATCCAACAGTCGATCACACT 60.354 50.000 0.00 0.00 0.00 3.55
1926 2013 2.002586 CCATCCAACAGTCGATCACAC 58.997 52.381 0.00 0.00 0.00 3.82
1927 2014 1.066215 CCCATCCAACAGTCGATCACA 60.066 52.381 0.00 0.00 0.00 3.58
1928 2015 1.066143 ACCCATCCAACAGTCGATCAC 60.066 52.381 0.00 0.00 0.00 3.06
1929 2016 1.066215 CACCCATCCAACAGTCGATCA 60.066 52.381 0.00 0.00 0.00 2.92
1930 2017 1.656652 CACCCATCCAACAGTCGATC 58.343 55.000 0.00 0.00 0.00 3.69
1931 2018 0.392998 GCACCCATCCAACAGTCGAT 60.393 55.000 0.00 0.00 0.00 3.59
1932 2019 1.003839 GCACCCATCCAACAGTCGA 60.004 57.895 0.00 0.00 0.00 4.20
1933 2020 2.040544 GGCACCCATCCAACAGTCG 61.041 63.158 0.00 0.00 0.00 4.18
1934 2021 2.040544 CGGCACCCATCCAACAGTC 61.041 63.158 0.00 0.00 0.00 3.51
1935 2022 2.034066 CGGCACCCATCCAACAGT 59.966 61.111 0.00 0.00 0.00 3.55
1936 2023 2.751436 CCGGCACCCATCCAACAG 60.751 66.667 0.00 0.00 0.00 3.16
1937 2024 4.358841 CCCGGCACCCATCCAACA 62.359 66.667 0.00 0.00 0.00 3.33
1938 2025 4.041762 TCCCGGCACCCATCCAAC 62.042 66.667 0.00 0.00 0.00 3.77
1939 2026 4.041762 GTCCCGGCACCCATCCAA 62.042 66.667 0.00 0.00 0.00 3.53
1951 2038 3.031417 AAATCCTGGCTCCGTCCCG 62.031 63.158 0.00 0.00 0.00 5.14
1952 2039 1.452108 CAAATCCTGGCTCCGTCCC 60.452 63.158 0.00 0.00 0.00 4.46
1953 2040 1.452108 CCAAATCCTGGCTCCGTCC 60.452 63.158 0.00 0.00 38.76 4.79
1954 2041 0.744771 GTCCAAATCCTGGCTCCGTC 60.745 60.000 0.00 0.00 45.98 4.79
1955 2042 1.299976 GTCCAAATCCTGGCTCCGT 59.700 57.895 0.00 0.00 45.98 4.69
1956 2043 0.107017 ATGTCCAAATCCTGGCTCCG 60.107 55.000 0.00 0.00 45.98 4.63
1957 2044 1.064463 TCATGTCCAAATCCTGGCTCC 60.064 52.381 0.00 0.00 45.98 4.70
1958 2045 2.295885 CTCATGTCCAAATCCTGGCTC 58.704 52.381 0.00 0.00 45.98 4.70
1959 2046 1.064166 CCTCATGTCCAAATCCTGGCT 60.064 52.381 0.00 0.00 45.98 4.75
1960 2047 1.396653 CCTCATGTCCAAATCCTGGC 58.603 55.000 0.00 0.00 45.98 4.85
1962 2049 1.410648 CCCCCTCATGTCCAAATCCTG 60.411 57.143 0.00 0.00 0.00 3.86
1963 2050 0.929244 CCCCCTCATGTCCAAATCCT 59.071 55.000 0.00 0.00 0.00 3.24
1964 2051 3.520623 CCCCCTCATGTCCAAATCC 57.479 57.895 0.00 0.00 0.00 3.01
1991 2078 4.769345 TTTGGAAATGGCTCTGGTTTTT 57.231 36.364 0.00 0.00 0.00 1.94
1992 2079 4.980339 ATTTGGAAATGGCTCTGGTTTT 57.020 36.364 0.00 0.00 0.00 2.43
1993 2080 4.980339 AATTTGGAAATGGCTCTGGTTT 57.020 36.364 0.00 0.00 0.00 3.27
1994 2081 4.980339 AAATTTGGAAATGGCTCTGGTT 57.020 36.364 0.00 0.00 0.00 3.67
1995 2082 4.980339 AAAATTTGGAAATGGCTCTGGT 57.020 36.364 0.00 0.00 0.00 4.00
1996 2083 7.926674 ATTTAAAATTTGGAAATGGCTCTGG 57.073 32.000 9.44 0.00 0.00 3.86
1997 2084 9.001542 TGAATTTAAAATTTGGAAATGGCTCTG 57.998 29.630 10.52 0.00 0.00 3.35
1998 2085 9.743581 ATGAATTTAAAATTTGGAAATGGCTCT 57.256 25.926 10.52 0.00 0.00 4.09
1999 2086 9.992910 GATGAATTTAAAATTTGGAAATGGCTC 57.007 29.630 10.52 6.90 0.00 4.70
2000 2087 9.743581 AGATGAATTTAAAATTTGGAAATGGCT 57.256 25.926 10.52 5.38 0.00 4.75
2006 2093 9.558396 AGCACAAGATGAATTTAAAATTTGGAA 57.442 25.926 0.00 0.00 0.00 3.53
2007 2094 9.558396 AAGCACAAGATGAATTTAAAATTTGGA 57.442 25.926 0.00 0.00 0.00 3.53
2008 2095 9.815936 GAAGCACAAGATGAATTTAAAATTTGG 57.184 29.630 0.00 0.00 0.00 3.28
2015 2102 8.677300 GGTAGATGAAGCACAAGATGAATTTAA 58.323 33.333 0.00 0.00 0.00 1.52
2016 2103 7.828717 TGGTAGATGAAGCACAAGATGAATTTA 59.171 33.333 0.00 0.00 0.00 1.40
2017 2104 6.660521 TGGTAGATGAAGCACAAGATGAATTT 59.339 34.615 0.00 0.00 0.00 1.82
2018 2105 6.182627 TGGTAGATGAAGCACAAGATGAATT 58.817 36.000 0.00 0.00 0.00 2.17
2019 2106 5.748402 TGGTAGATGAAGCACAAGATGAAT 58.252 37.500 0.00 0.00 0.00 2.57
2020 2107 5.164620 TGGTAGATGAAGCACAAGATGAA 57.835 39.130 0.00 0.00 0.00 2.57
2021 2108 4.824479 TGGTAGATGAAGCACAAGATGA 57.176 40.909 0.00 0.00 0.00 2.92
2022 2109 5.121105 TGATGGTAGATGAAGCACAAGATG 58.879 41.667 0.00 0.00 0.00 2.90
2023 2110 5.363562 TGATGGTAGATGAAGCACAAGAT 57.636 39.130 0.00 0.00 0.00 2.40
2024 2111 4.824479 TGATGGTAGATGAAGCACAAGA 57.176 40.909 0.00 0.00 0.00 3.02
2025 2112 6.051074 TGTATGATGGTAGATGAAGCACAAG 58.949 40.000 0.00 0.00 0.00 3.16
2026 2113 5.988287 TGTATGATGGTAGATGAAGCACAA 58.012 37.500 0.00 0.00 0.00 3.33
2027 2114 5.612725 TGTATGATGGTAGATGAAGCACA 57.387 39.130 0.00 0.00 0.00 4.57
2028 2115 7.875041 AGTTATGTATGATGGTAGATGAAGCAC 59.125 37.037 0.00 0.00 0.00 4.40
2029 2116 7.966812 AGTTATGTATGATGGTAGATGAAGCA 58.033 34.615 0.00 0.00 0.00 3.91
2030 2117 8.839310 AAGTTATGTATGATGGTAGATGAAGC 57.161 34.615 0.00 0.00 0.00 3.86
2065 2152 8.983724 AGAAATTCTCGAGTTACTTTCTCAAAG 58.016 33.333 13.13 0.00 44.10 2.77
2066 2153 8.888579 AGAAATTCTCGAGTTACTTTCTCAAA 57.111 30.769 13.13 0.00 29.44 2.69
2067 2154 8.765219 CAAGAAATTCTCGAGTTACTTTCTCAA 58.235 33.333 22.12 6.56 33.18 3.02
2068 2155 7.926555 ACAAGAAATTCTCGAGTTACTTTCTCA 59.073 33.333 22.12 0.00 33.18 3.27
2069 2156 8.300495 ACAAGAAATTCTCGAGTTACTTTCTC 57.700 34.615 22.12 9.31 33.18 2.87
2070 2157 8.552034 CAACAAGAAATTCTCGAGTTACTTTCT 58.448 33.333 13.13 17.09 35.16 2.52
2071 2158 7.321509 GCAACAAGAAATTCTCGAGTTACTTTC 59.678 37.037 13.13 15.40 0.00 2.62
2072 2159 7.132863 GCAACAAGAAATTCTCGAGTTACTTT 58.867 34.615 13.13 7.97 0.00 2.66
2073 2160 6.564125 CGCAACAAGAAATTCTCGAGTTACTT 60.564 38.462 13.13 9.28 0.00 2.24
2074 2161 5.107453 CGCAACAAGAAATTCTCGAGTTACT 60.107 40.000 13.13 3.72 0.00 2.24
2075 2162 5.073478 CGCAACAAGAAATTCTCGAGTTAC 58.927 41.667 13.13 1.44 0.00 2.50
2076 2163 4.377022 GCGCAACAAGAAATTCTCGAGTTA 60.377 41.667 13.13 2.20 0.00 2.24
2077 2164 3.607078 GCGCAACAAGAAATTCTCGAGTT 60.607 43.478 13.13 0.00 0.00 3.01
2078 2165 2.096218 GCGCAACAAGAAATTCTCGAGT 60.096 45.455 13.13 0.00 0.00 4.18
2079 2166 2.096268 TGCGCAACAAGAAATTCTCGAG 60.096 45.455 8.16 5.93 0.00 4.04
2080 2167 1.870402 TGCGCAACAAGAAATTCTCGA 59.130 42.857 8.16 0.00 0.00 4.04
2081 2168 2.314561 TGCGCAACAAGAAATTCTCG 57.685 45.000 8.16 0.00 0.00 4.04
2082 2169 5.368374 CAAATTGCGCAACAAGAAATTCTC 58.632 37.500 27.64 0.00 42.87 2.87
2083 2170 4.211794 CCAAATTGCGCAACAAGAAATTCT 59.788 37.500 27.64 1.66 42.87 2.40
2084 2171 4.024977 ACCAAATTGCGCAACAAGAAATTC 60.025 37.500 27.64 0.00 42.87 2.17
2085 2172 3.876320 ACCAAATTGCGCAACAAGAAATT 59.124 34.783 27.64 11.26 42.87 1.82
2086 2173 3.465871 ACCAAATTGCGCAACAAGAAAT 58.534 36.364 27.64 4.31 42.87 2.17
2087 2174 2.898705 ACCAAATTGCGCAACAAGAAA 58.101 38.095 27.64 0.20 42.87 2.52
2088 2175 2.593346 ACCAAATTGCGCAACAAGAA 57.407 40.000 27.64 1.15 42.87 2.52
2089 2176 2.030363 CCTACCAAATTGCGCAACAAGA 60.030 45.455 27.64 2.10 42.87 3.02
2090 2177 2.288152 ACCTACCAAATTGCGCAACAAG 60.288 45.455 27.64 17.09 42.87 3.16
2091 2178 1.683917 ACCTACCAAATTGCGCAACAA 59.316 42.857 27.64 3.07 44.01 2.83
2092 2179 1.323412 ACCTACCAAATTGCGCAACA 58.677 45.000 27.64 4.03 0.00 3.33
2093 2180 3.775661 ATACCTACCAAATTGCGCAAC 57.224 42.857 27.64 0.00 0.00 4.17
2094 2181 4.519213 AGTATACCTACCAAATTGCGCAA 58.481 39.130 27.24 27.24 0.00 4.85
2095 2182 4.145365 AGTATACCTACCAAATTGCGCA 57.855 40.909 5.66 5.66 0.00 6.09
2096 2183 5.065474 TCAAAGTATACCTACCAAATTGCGC 59.935 40.000 0.00 0.00 0.00 6.09
2097 2184 6.671614 TCAAAGTATACCTACCAAATTGCG 57.328 37.500 0.00 0.00 0.00 4.85
2098 2185 9.869757 AAATTCAAAGTATACCTACCAAATTGC 57.130 29.630 0.00 0.00 0.00 3.56
2124 2211 6.650807 TGTTGTCTTAAAACATGCACCAAAAA 59.349 30.769 0.00 0.00 32.71 1.94
2125 2212 6.166279 TGTTGTCTTAAAACATGCACCAAAA 58.834 32.000 0.00 0.00 32.71 2.44
2126 2213 5.724328 TGTTGTCTTAAAACATGCACCAAA 58.276 33.333 0.00 0.00 32.71 3.28
2127 2214 5.330455 TGTTGTCTTAAAACATGCACCAA 57.670 34.783 0.00 0.00 32.71 3.67
2128 2215 4.991153 TGTTGTCTTAAAACATGCACCA 57.009 36.364 0.00 0.00 32.71 4.17
2129 2216 5.527951 TGATGTTGTCTTAAAACATGCACC 58.472 37.500 8.39 0.00 45.81 5.01
2130 2217 7.642071 AATGATGTTGTCTTAAAACATGCAC 57.358 32.000 8.39 0.00 45.81 4.57
2131 2218 8.143193 AGAAATGATGTTGTCTTAAAACATGCA 58.857 29.630 8.39 0.00 45.81 3.96
2132 2219 8.524870 AGAAATGATGTTGTCTTAAAACATGC 57.475 30.769 8.39 2.88 45.81 4.06
2133 2220 9.903682 AGAGAAATGATGTTGTCTTAAAACATG 57.096 29.630 8.39 0.00 45.81 3.21
2139 2226 9.087424 CGATGTAGAGAAATGATGTTGTCTTAA 57.913 33.333 0.00 0.00 33.50 1.85
2140 2227 7.706607 CCGATGTAGAGAAATGATGTTGTCTTA 59.293 37.037 0.00 0.00 33.50 2.10
2141 2228 6.536582 CCGATGTAGAGAAATGATGTTGTCTT 59.463 38.462 0.00 0.00 33.50 3.01
2142 2229 6.045318 CCGATGTAGAGAAATGATGTTGTCT 58.955 40.000 0.00 0.00 35.47 3.41
2143 2230 5.812642 ACCGATGTAGAGAAATGATGTTGTC 59.187 40.000 0.00 0.00 0.00 3.18
2144 2231 5.734720 ACCGATGTAGAGAAATGATGTTGT 58.265 37.500 0.00 0.00 0.00 3.32
2145 2232 7.953158 ATACCGATGTAGAGAAATGATGTTG 57.047 36.000 0.00 0.00 0.00 3.33
2152 2239 9.262358 GCTCTTTTTATACCGATGTAGAGAAAT 57.738 33.333 0.00 0.00 26.57 2.17
2153 2240 7.434307 CGCTCTTTTTATACCGATGTAGAGAAA 59.566 37.037 0.00 0.00 0.00 2.52
2154 2241 6.916387 CGCTCTTTTTATACCGATGTAGAGAA 59.084 38.462 0.00 0.00 0.00 2.87
2155 2242 6.261603 TCGCTCTTTTTATACCGATGTAGAGA 59.738 38.462 0.00 0.00 0.00 3.10
2156 2243 6.436261 TCGCTCTTTTTATACCGATGTAGAG 58.564 40.000 0.00 0.00 0.00 2.43
2157 2244 6.039047 ACTCGCTCTTTTTATACCGATGTAGA 59.961 38.462 0.00 0.00 0.00 2.59
2158 2245 6.207213 ACTCGCTCTTTTTATACCGATGTAG 58.793 40.000 0.00 0.00 0.00 2.74
2159 2246 6.140303 ACTCGCTCTTTTTATACCGATGTA 57.860 37.500 0.00 0.00 0.00 2.29
2160 2247 5.007385 ACTCGCTCTTTTTATACCGATGT 57.993 39.130 0.00 0.00 0.00 3.06
2161 2248 5.291128 ACAACTCGCTCTTTTTATACCGATG 59.709 40.000 0.00 0.00 0.00 3.84
2162 2249 5.291128 CACAACTCGCTCTTTTTATACCGAT 59.709 40.000 0.00 0.00 0.00 4.18
2163 2250 4.624024 CACAACTCGCTCTTTTTATACCGA 59.376 41.667 0.00 0.00 0.00 4.69
2164 2251 4.201685 CCACAACTCGCTCTTTTTATACCG 60.202 45.833 0.00 0.00 0.00 4.02
2165 2252 4.933400 TCCACAACTCGCTCTTTTTATACC 59.067 41.667 0.00 0.00 0.00 2.73
2166 2253 5.867716 TCTCCACAACTCGCTCTTTTTATAC 59.132 40.000 0.00 0.00 0.00 1.47
2167 2254 6.032956 TCTCCACAACTCGCTCTTTTTATA 57.967 37.500 0.00 0.00 0.00 0.98
2168 2255 4.894784 TCTCCACAACTCGCTCTTTTTAT 58.105 39.130 0.00 0.00 0.00 1.40
2169 2256 4.330944 TCTCCACAACTCGCTCTTTTTA 57.669 40.909 0.00 0.00 0.00 1.52
2170 2257 3.194005 TCTCCACAACTCGCTCTTTTT 57.806 42.857 0.00 0.00 0.00 1.94
2171 2258 2.910688 TCTCCACAACTCGCTCTTTT 57.089 45.000 0.00 0.00 0.00 2.27
2172 2259 2.693069 CATCTCCACAACTCGCTCTTT 58.307 47.619 0.00 0.00 0.00 2.52
2173 2260 1.674221 GCATCTCCACAACTCGCTCTT 60.674 52.381 0.00 0.00 0.00 2.85
2174 2261 0.108424 GCATCTCCACAACTCGCTCT 60.108 55.000 0.00 0.00 0.00 4.09
2175 2262 0.390340 TGCATCTCCACAACTCGCTC 60.390 55.000 0.00 0.00 0.00 5.03
2176 2263 0.035317 TTGCATCTCCACAACTCGCT 59.965 50.000 0.00 0.00 0.00 4.93
2177 2264 0.166814 GTTGCATCTCCACAACTCGC 59.833 55.000 0.00 0.00 42.27 5.03
2178 2265 1.511850 TGTTGCATCTCCACAACTCG 58.488 50.000 7.32 0.00 45.07 4.18
2179 2266 3.988379 TTTGTTGCATCTCCACAACTC 57.012 42.857 0.42 0.00 45.07 3.01
2180 2267 4.147321 AGATTTGTTGCATCTCCACAACT 58.853 39.130 0.42 0.00 45.07 3.16
2181 2268 4.510038 AGATTTGTTGCATCTCCACAAC 57.490 40.909 0.42 0.00 45.06 3.32
2182 2269 4.873817 CAAGATTTGTTGCATCTCCACAA 58.126 39.130 0.00 0.00 30.19 3.33
2183 2270 4.508461 CAAGATTTGTTGCATCTCCACA 57.492 40.909 0.00 0.00 30.19 4.17
2193 2280 3.803778 GGTTGAACAGGCAAGATTTGTTG 59.196 43.478 0.00 0.00 35.35 3.33
2194 2281 3.490761 CGGTTGAACAGGCAAGATTTGTT 60.491 43.478 0.00 0.00 37.72 2.83
2195 2282 2.034558 CGGTTGAACAGGCAAGATTTGT 59.965 45.455 0.00 0.00 0.00 2.83
2196 2283 2.664916 CGGTTGAACAGGCAAGATTTG 58.335 47.619 0.00 0.00 0.00 2.32
2197 2284 1.000274 GCGGTTGAACAGGCAAGATTT 60.000 47.619 0.00 0.00 0.00 2.17
2198 2285 0.598065 GCGGTTGAACAGGCAAGATT 59.402 50.000 0.00 0.00 0.00 2.40
2199 2286 0.537143 TGCGGTTGAACAGGCAAGAT 60.537 50.000 10.23 0.00 31.50 2.40
2200 2287 0.537143 ATGCGGTTGAACAGGCAAGA 60.537 50.000 15.39 0.00 39.09 3.02
2201 2288 1.164411 TATGCGGTTGAACAGGCAAG 58.836 50.000 15.39 0.00 39.09 4.01
2202 2289 1.832883 ATATGCGGTTGAACAGGCAA 58.167 45.000 15.39 7.37 39.09 4.52
2203 2290 2.700722 TATATGCGGTTGAACAGGCA 57.299 45.000 14.12 14.12 40.06 4.75
2204 2291 2.484264 GGATATATGCGGTTGAACAGGC 59.516 50.000 0.00 0.35 0.00 4.85
2205 2292 3.738982 TGGATATATGCGGTTGAACAGG 58.261 45.455 0.00 0.00 0.00 4.00
2206 2293 4.318760 CGTTGGATATATGCGGTTGAACAG 60.319 45.833 0.00 0.00 0.00 3.16
2207 2294 3.558006 CGTTGGATATATGCGGTTGAACA 59.442 43.478 0.00 0.00 0.00 3.18
2208 2295 3.059188 CCGTTGGATATATGCGGTTGAAC 60.059 47.826 0.00 0.00 37.87 3.18
2209 2296 3.135225 CCGTTGGATATATGCGGTTGAA 58.865 45.455 0.00 0.00 37.87 2.69
2210 2297 2.761559 CCGTTGGATATATGCGGTTGA 58.238 47.619 0.00 0.00 37.87 3.18
2211 2298 1.196808 GCCGTTGGATATATGCGGTTG 59.803 52.381 12.90 0.16 43.78 3.77
2212 2299 1.519408 GCCGTTGGATATATGCGGTT 58.481 50.000 12.90 0.00 43.78 4.44
2213 2300 0.321298 GGCCGTTGGATATATGCGGT 60.321 55.000 12.90 0.00 43.78 5.68
2214 2301 1.024579 GGGCCGTTGGATATATGCGG 61.025 60.000 0.00 5.27 44.60 5.69
2215 2302 0.321210 TGGGCCGTTGGATATATGCG 60.321 55.000 0.00 0.00 0.00 4.73
2216 2303 1.453155 CTGGGCCGTTGGATATATGC 58.547 55.000 0.00 0.00 0.00 3.14
2217 2304 1.351017 ACCTGGGCCGTTGGATATATG 59.649 52.381 15.45 0.00 0.00 1.78
2218 2305 1.628846 GACCTGGGCCGTTGGATATAT 59.371 52.381 15.45 0.00 0.00 0.86
2219 2306 1.053424 GACCTGGGCCGTTGGATATA 58.947 55.000 15.45 0.00 0.00 0.86
2220 2307 1.837090 GACCTGGGCCGTTGGATAT 59.163 57.895 15.45 0.00 0.00 1.63
2221 2308 2.727392 CGACCTGGGCCGTTGGATA 61.727 63.158 15.45 0.00 0.00 2.59
2222 2309 4.096003 CGACCTGGGCCGTTGGAT 62.096 66.667 15.45 1.96 0.00 3.41
2226 2313 4.265056 AAAGCGACCTGGGCCGTT 62.265 61.111 0.00 3.93 0.00 4.44
2229 2316 4.660938 ACCAAAGCGACCTGGGCC 62.661 66.667 0.00 0.00 37.00 5.80
2230 2317 3.365265 CACCAAAGCGACCTGGGC 61.365 66.667 0.00 0.00 37.00 5.36
2231 2318 1.106944 AAACACCAAAGCGACCTGGG 61.107 55.000 0.00 0.00 37.00 4.45
2232 2319 1.535462 CTAAACACCAAAGCGACCTGG 59.465 52.381 0.00 0.00 38.77 4.45
2233 2320 1.069227 GCTAAACACCAAAGCGACCTG 60.069 52.381 0.00 0.00 0.00 4.00
2234 2321 1.235724 GCTAAACACCAAAGCGACCT 58.764 50.000 0.00 0.00 0.00 3.85
2235 2322 0.948678 TGCTAAACACCAAAGCGACC 59.051 50.000 0.00 0.00 39.14 4.79
2236 2323 2.989422 ATGCTAAACACCAAAGCGAC 57.011 45.000 0.00 0.00 39.14 5.19
2237 2324 5.216648 GTTTAATGCTAAACACCAAAGCGA 58.783 37.500 4.24 0.00 44.29 4.93
2238 2325 5.494863 GTTTAATGCTAAACACCAAAGCG 57.505 39.130 4.24 0.00 44.29 4.68
2247 2334 8.807581 GGATGCTAAACATGTTTAATGCTAAAC 58.192 33.333 28.47 20.25 44.86 2.01
2248 2335 8.748412 AGGATGCTAAACATGTTTAATGCTAAA 58.252 29.630 28.47 17.29 39.84 1.85
2249 2336 8.292444 AGGATGCTAAACATGTTTAATGCTAA 57.708 30.769 28.47 17.78 39.84 3.09
2250 2337 7.880160 AGGATGCTAAACATGTTTAATGCTA 57.120 32.000 28.47 20.34 39.84 3.49
2251 2338 6.780457 AGGATGCTAAACATGTTTAATGCT 57.220 33.333 28.47 25.26 39.84 3.79
2252 2339 7.201548 CCAAAGGATGCTAAACATGTTTAATGC 60.202 37.037 26.60 25.65 39.84 3.56
2253 2340 7.201548 GCCAAAGGATGCTAAACATGTTTAATG 60.202 37.037 26.60 18.77 39.84 1.90
2254 2341 6.818142 GCCAAAGGATGCTAAACATGTTTAAT 59.182 34.615 26.60 19.73 39.84 1.40
2255 2342 6.162777 GCCAAAGGATGCTAAACATGTTTAA 58.837 36.000 26.60 16.39 39.84 1.52
2256 2343 5.337169 GGCCAAAGGATGCTAAACATGTTTA 60.337 40.000 25.48 25.48 39.84 2.01
2257 2344 4.563374 GGCCAAAGGATGCTAAACATGTTT 60.563 41.667 25.99 25.99 39.84 2.83
2258 2345 3.055891 GGCCAAAGGATGCTAAACATGTT 60.056 43.478 4.92 4.92 39.84 2.71
2259 2346 2.497273 GGCCAAAGGATGCTAAACATGT 59.503 45.455 0.00 0.00 39.84 3.21
2260 2347 2.762327 AGGCCAAAGGATGCTAAACATG 59.238 45.455 5.01 0.00 39.84 3.21
2261 2348 3.105959 AGGCCAAAGGATGCTAAACAT 57.894 42.857 5.01 0.00 43.54 2.71
2262 2349 2.603075 AGGCCAAAGGATGCTAAACA 57.397 45.000 5.01 0.00 0.00 2.83
2263 2350 6.709018 TTAATAGGCCAAAGGATGCTAAAC 57.291 37.500 5.01 0.00 0.00 2.01
2264 2351 7.450323 GGTATTAATAGGCCAAAGGATGCTAAA 59.550 37.037 5.01 0.00 0.00 1.85
2265 2352 6.946009 GGTATTAATAGGCCAAAGGATGCTAA 59.054 38.462 5.01 0.00 0.00 3.09
2266 2353 6.481643 GGTATTAATAGGCCAAAGGATGCTA 58.518 40.000 5.01 0.00 0.00 3.49
2267 2354 5.325239 GGTATTAATAGGCCAAAGGATGCT 58.675 41.667 5.01 0.00 0.00 3.79
2268 2355 5.644977 GGTATTAATAGGCCAAAGGATGC 57.355 43.478 5.01 0.00 0.00 3.91



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.