>input_sequence_84761
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-----------------------------------------ATGCAGGCGTGGAGCTTAAGGAAGGATGGGAAAGTGATG
GATCTAATCGACTCATCTATCATCAAGGGTTGCTCTCTCGTTGAAGCTTTACGATGCATCCATATCGGACTCTTGTCGGT
GCAGGATGACCCAGATGCTCACCCTCTCATGTCTTGGGTGGTAGCAAGCCTGGATAACGAAGACATTGAGATCCCACAAC
CGAAAGAACCTATGTGCTTTGCACACCGTAACTACAGAGCCAGCGAAAGCCATGTACATGACATGAGCCTCGAAAACCTC
AAGGAGTGCTAG--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------
>chr4D_1_TraesCS4D01G355400
CTGATAGTTAGACCCTTTTTGGCGAGGGAGATAGTTAGATCATTAATATTGGAAGATTTAACTTTCTTGACTCAATAATA
CCT----CATG----TTTCAGGGAACGTCAGAAGATCGTAAGGAAATTGCTGTGAAAAGGCTTCGTGTTGGTTCTGTCCA
GGGGGCTGTGGAGTTCAAAAATGAAATAGCTCTGACTTCCAGGTTGCAACATAGAAACTTGGTCAAACTTATGGGCTGCA
GTATTCATGAAGATGAGAAGCTTTTGATTTACGAATACCTACCTAACCAAAGTTTGGATTACTTCTTTTTTTTTAGTACG
TTCT--ACTCACCTGTTGT-GAAATCTCTATTTTGGGTCAAACATC---ACTGACAAGATCATTTATCTAATTCTGTCCC
TGATGGATGATACAAGAAAATCACTACTCAATTAGCCCACAAGATTTAAAATAATCACTGGTATAGCTAGGGGACTCCTT
TATCTCCACCATGATTCCAAATTGGTTATGATTCATAGAGATCTCAAAGCAAGCAACATATTGTTGGATACTGATATGAG
CCCCAAAATATGTGATTTTGG-------TACAACTAGGAGCTTTGGTGTCAATGAACAGGAAGGACATACCAATTGAGTT
GTTGGAACATTGTGAGTAGTGAGGAATTACAATTACGGGATCCCTTAACTTTTGTGCTTCCACTGGATAATAAGTTTAAA
TTTACCATGGTTAATTGTCAAACAAGCGGATACATGTCACCTGAATATGCAATGGAAGGCATCATCTCCGTCAAATC---
----------------------------------------------------GGCACCACAACCCCAACAAGCTCACGTG
CATGCACTCAGAACCTTATAGATTATGTGAGTATATTTTACTT-TATTTAATGATTATAGTTGTGTCCATCTTTGGATAC
AGAGGCTGCAGGTTATCCTTCTTTTCTTCAAAAAACTTTATTCAGTCATCAGA----ATTTGTTCAACTAATATGAAGGT
GGTACTATACTGTGGCCTTAATTAATGACATGATTGGTTTCATGCAGGCGTGGAGCTTAAGGAAGGATGGGAAAGTGATG
GATCTAATCGACTCATCTATCATCAAGGGTTGCTCTCTCGTTGAAGCTTTACGATGCATCCATATCGGACTCTTGTCGGT
GCAGGATGACCCAGATGCTCACCCTCTCATGTCTTGGGTGGTAGCAAGCCTGGATAACGAAGACATTGAGATCCCACAAC
CGAAAGAACCTATGTGCTTTGCACACCGTAACTACAGAGCCAGCGAAAGCCATGTACATGACATGAGCCTCGAAAACCTC
AAGGAGTGCTAGAAAACGATTGGTCATGTCTTGTCCTTGTGACA-----CTGATATCTTCATATGCGTACCTGCTCAGTT
CTATTCTAAGTTGGATGTGCTCTGTCACCGTCAGGATTGTAATTATGGTTGTAATATGCACTATGTTTGTAATTCTAATG
TGTAATATCATCCGGAGCTCTTTTATGGTGCATTTAAATGATAGGAGCCATTCATTTCCAATCATTTGATGGACTAACTA
ATACTATTAGAATAAAATCAATAGTATAAAGACATTATGTTTTCTTCTCTCTGCTCGAATGTGATATCCTTCTAGCAGAG
ATTTTATGCCTCCTATTCGAAGCAAGTCGGTGCTGCAGCGCCATCGCCTTTGGTGTCTAAGACGGCGACACGCTCGGGAA
GGTCCACCATGTTGATGTCGATTCAGCCATGCCATGTGCATGGCCGTTGGACGCGGCGGGGCAAAGGCACTGGTGGGCAC
CATGAGCAGCTGAGGGAGATTCACGTCGATGTAGCGGCAGCTTCGTGACCTATGGGTTGTTTCGTGATGCCCAACTGGAG
CTCCCAATTGAAGAGAATGGAGCCCAGAATTTTGGAAGATGGCAACTTCTTCGTCGATGCCCTTAGAACCAATAGATGGT
GTGAGATCTGAAGTGTGATCGACTGTTGGATGGGTGCCGGGACGGAGCCAGGATTTGGACATGAGGGGGGTGTGGCAAAA
AACCAGAGCCATTTCCAAATTTTAAATTCATCTTGTGCTTCATCTACCATCATACATAACTTATTAGTACACTTTGAGAA
AGTAACTCGAGAATTTCTTGTTGCGCAATTTGGTAGGTATACTTTGAATTTTTTTGGTGCATGTTTTAAGACAACATCAT
TTCTCTACATCGGTATAAAAAGAGCGAGTTGTGGAGATGCAACAAATCTTGCCTGTTCAACCGCATATATCCAACGGCCC
AGGTCGCTTTGGTGTTTAGCATTAAACATGTTTAGCATCCTTTGGCCTATTAATACC
>chr5A_1
CTGGTAGTTAGATCTTTTTTTGCAAGGGAAACAGTTAGATAATTAATATTAGAAGATCTAACTTTCTTGACTCAATAATA
CCT----CATG----TTTCAGGGAACGTTCGAAGATGGTAAGGAAATTGCTGTGAAAAGGCTTCGTGTTGGTTCTGTCCA
AGGGGCTGTGGAGTTCAAAAATGAAATAGCTCTGACTTCTAGGTTGCAGCATAGAAACTTGGTCAAACTTATGGGCTGCA
GTATTTATGAAGACGAAAAGCTTTTGATTTATGAATACGTACCTAACCGAAGTTTGGATTACTTCATTTTC---AGTACG
TTCTCTACTCACCTGTTGC-AAAATCTCTATTTTCGGTCAAACATC---ACTGACAAGATGATTCGTCTAACTTTATCCC
TGATAGATGATACAAGAAAATCACTACTCAATTGGCCTACAAGATTTAAGATAATCATTGGAGTAGCTAGGGGACTTCTT
TATCTCCACCAAGATTCCAGATTGGTTATGATTCATAGAGATCTCAAAGCAGGCAACATATTGTTGGATGCTGAGATGAA
CCCGAAAATATCTGATTTTGG-------TACAGCTAGGGTCTTTGGTGTGAATGAACACGAACAACGTACCAATCAAGTT
GTTGGAACATTGTGAGTAGTGTGGAATTTCATTTATGGGATCTCTTAACTTTTGTGCTTCAATTGGATGATAAGTTTCAA
TTTACCATGGTTAATTGTCAAACCAGCGGATACATGTCGCCTGAATACGCAATGGAAGGCATAATCTCCGTCAAATCCGA
TGTTTACAGCTTTGGGGTATTAATTCTAGAGATTGTGAGTGGCATGAAGACCGGCACCACAACCCCAAAGAGCTCATGTG
CATGCACTCATAACCTTATAAATTATGTGAGTGTATTTTACTT-TATCTAGTGATTATGGTTGTGTGCATCTTTCGATAC
AGAGGCTGCGGGTTATCCTCCTTTTCTA-AAAAAACTTTATTCAGTGATTAGA----ATTTGTTCAACTGATATGAAGGT
GGTACTATGTCGTGGACTTAGTTAATGACATGATTGGTTTGATGCAGGCGTGGAGCTTAAGGAAGGATGGGAAATTGATG
GATCTAATCGAGTCATCTATCATCGAGGATTGCTCTCTCGCTGAAGCTCTACGATGCATCCATGTCGGACTCTTGTCGGT
GCAGGATGACCCGGACGCTCGCCCTCTCATGTCTTGGGTGGTAGCAAGCCTGGATAACAAAGGCATTGAGCTCGCGCAGC
CGAAAGAACCTATGTGCTTTACACATCGTAAATACGGAGCCGGGGAAAGCCATGTACATGACATGAGCCTCGAAAACCTT
AAGGGGTGCTAGAAAACCATTGGTCCTGTCTTGTCCTTGTGACA-----CTAATGTCTTCATATAAATAACTGCTCATTT
CTATTCTACACTGGATGCGCTCTGTCACCGCCAGGATTGTAATTATGCTTGTAATATGTACTACGTTTGTAATTCTAATG
TGTAATATTATCCGGAGTTCTTTTACAGTGCATCTAAACAATATGAGCCGTTCATTTCCAGTCATTCAATGGACTAACTA
ATA-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------
>chr5A_1
CTGATAGTTAGATCTTTTTTTGCAAGGGAAACAGTTAGATAATTAATATTAGAAGATCTAACTTTCTTGACTCAATAATA
CCT----CATG----TTTCAGGGAACGTTCGAAGATGGTAAGGAAATTGCTGTGAAAAGGCTTCGTGTTGGTTCTGTCCA
AGGGGCTGTGGAGTTCAAAAATGAAATAGCTCTGACTTCTAGGTTGCAGCATAGAAACTTGGTCAAACTTATGGGCTGCA
GTATTTATGAAGACGAAAAGCTTTTGATTTATGAATACCTACCTAACCGAAGTTTGGATTACTTCATTTTC---AGTACG
TTCTCTACTCACCTGTTGC-AAAATCTCTATTTTCGGTCAAACATC---ACTGACAAGATGATTCGTCTAACTTTATCCC
TGATAGATGATACAAGAAAATCACTACTCAATTGGCCAACAAGATTTAAGATAATCATTGGAGTAGCTAGGGGACTTCTT
TATCTCCACCAAGATTCCAGATTGGTTATGATTCATAGAGATCTCAAAGCAGGCAACATATTGTTGGATGCTGAGATGAA
CCCGAAAATATCTGATTTTGG-------TACAGCTAGGGTCTTTGGTGTGAACGAACACGAACAACATACCAATCAAGTT
GTTGGAACATTGTGAGTAGTGTGGAATTTCATTTATGGGATCTCTTAACTTTTGTGCTTCAATTGGATGATAAGTTTCAA
TTTACCATGGTTAATTGTCAAACCAGCGGATACATGTCGCCTGAATACGCAATGGAAGGCATAATCTCCGTCAAATCCGA
TGTTTACAGCTTTGGGGTATTAATTCTAGAGATTGTGAGTGGCATGAAGACCGGCACCACAACCCCAAAGAGCTCATGTG
CATGCACTCATAACCTTATAAATTATGTGAGTGTATTTTACTT-TATCTAGTGATTATGGTTGTGTGCATCTTTCGATAC
AGAGGCTGCGGGTTATCCTCCTTTTCTA-AAAAAACTTTATTCAGTGATTAGA----ATTTGTTCAACTGATATGAAGGT
GGTACTATGTCGTGGACTTAGTTAATGACATGATTGGTTTGATGCAGGCGTGGAGCTTAAGGAAGGATGGGAAATTGATG
GATCTAATCGAGTCATCTATCATCGAGGATTGCTCTCTCGCTGAAGCTCTACGATGCATCCATGTCGGACTCTTGTCGGT
GCAGCATGACCCGGACGCTCGCCCTCTCATGTCTTGGGTGGTAGCAAGCCTGGATAACAAAGGCATTGAGCTCGCGCAGC
CGAAAGAACCTATGTGCTTTACACATCGTAAATACGGAGCCGGGGAAAGCCATGTACATGACATGAGCCTCGAAAACCTT
AAGGGGTGCTAGAAAACCATTGGTCCTGTCTTGTCCTTGTGACA-----CTAATGTCTTCATATAAATAACTGCTCATTT
CTATTCTACACTGGATGCGCTCTGTCACCGCCAGGATTGTAATTATGCTTGTAATATGTACTACGTTTGTAATTCTAATG
TGTAATATTATCCGAAGTTCTTTTACAGTGCATCTAAACAATATGAGCCGTTCATTTCCAGTCATTCAATGGACTAAGTA
ATACT---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------
>chr5A_1
CTGATAGTTAGATCTTTTTTTGCAAGGGAAACAGTTAGATAATTAATATTAGAAGATCTAACTTTCTTGACTCAATAATA
CCT----CATG----TTTCAGGGAACGTTCGAAGATGGTAAGGAAATTGCTGTGAAAAGGCTTCGTGTTGGTTCTGTCCA
AGGGGCTGTGGAGTTCAAAAATGAAATAGCTCTGACTTCTAGGTTGCAGCATAGAAACTTGGTCAAACTTATGGGCTGCA
GTATTTATGAAGACGAAAAGCTTTTGATTTATGAATACCTACCTAACCGAAGTTTGGATTACTTCATTTTC---AGTACA
TTCTCTACTCACCTGTTGC-AAAATCTCTATTTTCGGTCAAACATC---ACCGACAAGATGATTCGTCTAACTTTATCCC
TGATAGATGATACAAGAAAATCACTACTCAATTGGCCAACAAGATTTAAGATAATCATTGGAGTAGCTAGGGGACTTCTT
TATCTCCACCAAGATTCCAGATTGGTTATGATTCATAGTGATCTCAAAGCAGGCAACATATTGTTGGATGCTGAGATGAA
CCCGAAAATATCTGATTTTGG-------TACAGCTAGGGTCTTTGGTGTGAACGAACACGAACAACGTACCAATCAAGTT
GTTGGAACATTGTGAGTAGTGTGGAATTTCATTTATGGGATCTCTTAACTTTTGTGCTTCAATTGGATGATAAGTTTCAA
TTTACCATGGTTAATTGTCAAACCAGCGGATACATGTCGCCTGAATACGCAATGGAAGGCATAATCTCCGTCAAATCCGA
TGTTTACAGCTTTGGGGTATTAATTCTAGAGATTGTGAGTGGCATGAAGACCGGCACCACAACCCCAAAGAGCTCATGTG
CATGCACTCATAACCTTATAAATTATGTGAGTGTATTTTACTT-TATCTAGTGATTATGGTTGTGTGCATCTTTCGATAC
AGAGGCTGCGGGTTATCCTCCTTTTCTA-AAAAAACTTTATTCAGTGATTAGA----ATTTGTTCAACTGATATGAAGGT
GGTACTATGTCGTGGACTTAATTAATGACATGATTGGTTTGATGCAGGCGTGGAGCTTAAGGAAGGATGGGAAATTGATG
GATCTAATCGAGTCATCTATCATCGAGGATTGCTCTCTCGCTGAAGCTCTACGATGCATCCATGTTGGACTCTTGTCGGT
GCAGGATGACCCGGACGCTCGCCCTCTCATGTCTTGGGTGGTAGCAAGCCTGGATAACAAAGGCATTGAGCTCGCGCAGC
CGAAAGAACCTATGTGCTTTACACATCGTAAATACGGAGCCGGGGAAAGCCATGTACATGACATGAGCCTCGAAAACCTT
AAGGGGTGCTAGAAAACCATTGGTCCTGTCTTGTCCTTGTGACA-----CTAATGTCTTCATATAAATAACTGCTCATTT
CTATTCTACACTGGATGCGCTCTGTCACCGCCAGGATTGTAATTATGCTTGTAATATGTACTACGTTTGTAATTCTAATG
TGTAATATTATCCGGAGTTCTTTTACAGTGCATCTAAACAATATGAGCCGTTCATTTCCAGTCATTCAATGGACTAACTA
ATACT---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------
>chr5A_15
--------------CTTTTTTCCAAGGGAGATAGTTAGATCATTAA---TGGAAGATCCAACTTTCTTCACTCAATAATA
CCTCATGCATG----TTTCAGGGAAGGTTGGAAGATCGTAAGGAAATTGCTGTGAAAAGGCTTCGTGTAGGTTCTGTCCA
AGGGGCAGTGGAGTTCAAAAATGAAATAGCTCTGATTTCCAGGTTGCAGCACAAAAACTTGGTGGAACTTCTAGGCTACA
GTATTCATGAAGATGAAAAGCTTTTGATTTATGAATACCTACCTAACCGAAGTTTGGATTACTTCATTTTC---AGTAGG
TTCT--GCTCACTTGTTGC-TAAATCTTTACTTTTGGTCAAACGTCG---CTGATAAGATGATTTATCTAATTCTGTCCC
TGACAGATGGTACAAGAAAATTGCTGCTAAACTGGTCCACGAGATTTAAGATAATCAGGGGTGTAGCCAGGGGCCTTGTT
TATCTTCACCAAGATTCCAGATTGATGATGATTCATAGAGATCTCAAAGCAAGTAACATATTGTTGGATGTTGAGATGAG
CCCCAAAATTTCTGATTTTGG-------TATAGCTAGGCTCTTTGGTGTCCATGAACAGGAAGGACATACCGATCGAGTT
GTTGGAACATTGTGAGTAGTGAGGAATTTCATTTATGTGATCTCTCAACTTCTGTGCTTCAACTGGTTTATAATTTTAAA
TTTACCGTGGTTAATTCTCAAAGCAGGGGATACATGTCGCCGGAATACGCAATGGAAGGCATCATCTCTGTAAAATC---
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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---------------------------------------------------------
>chr4D_16
---------------TTTTTTCCGAGGGAGATAGTTAGATCACTAA---TGGAAGATCCAACTTTCTTGACTCAATAATA
CCT----CATGCATGTTTCAGGGAAGGTTGGAAGATGGTAGGGAAATTGCTGTGAAAAGGCTTCGTGTAGGTTCTCTCCA
AGGGGCAGTGGAGTTCAAAAATGAAATAGCTCTGATTTCTAGGTTGCAACACAGAAACTTGGTCAAACTTCTAGGCTGCA
GTATTCATGAAGATGAAAAGCTTTTGATTTATGAATATCTACCTAACCGAAGTTTGGATTACTTCATTTTC---AGTAGG
TTCT--GCTCACTTGTTGC-AAAATCTTTACTTTTGGTCAAACATC---ACTGATAAGATGATTTATCTAATTCTGTCCC
TGACAGATGGTACAAGAAAATTGCTGCTAAACTGGTCCACAAGATTTAAGATAATCAGGGGTGTAGCAAGGGGCCTTCTT
TATCTCCACCAAGATTCCAGATTGATGATGATTCATAGAGATCTCAAAGCAAGTAACATATTGTTGGATGCTGAGATGAG
CCCCAAAATTTCTGATTTTGG-------TACAGCTAGGCTCTTTGGTGTCCATGAACAGGAAGGACATACCAATCAAGTT
GTTGGAACATTGTGAGTAGTGAGGAATTTCATTTATGTGATCTCTCAACTTCTGTGCTTCAACTGGTTTATAATTTTAAA
TTTACCGCTGTTAATTGTCAAAGCAGTGGATACATGTCACCGGAATACGCAATGGAAGGTATCATCTCTGTAAAATC---
--------------------------------------------------------------------------------
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---------------------------------------------------------
>chr4B_16
TTTTTG--------------TGTGAGGGAGATAGTTAGAATATTAA---TGGAAGATCAAACTTTCTTGACTAAATAATA
CCT----CATG----TTTCAGGGAACGTTGGAAGATGGTAAGGAAATTGCTGTGAAAAGGCTTCGTGTAGGTTCTGTCCA
AGGGGCAGTGGAGTTCAAAAATGAAATAGCTCTGATTTCCAGGTTGCAGCATAGAAACTTGGTCAAACTTATAGGCTGCA
GTATTCATGAAGACGAAAAGTTTTTGATTTATGCATACCTACCTAACCGAAGTCTGGATTACTTCATTTTC---AGTACG
TTCT--ACTCACTTGTTGCAAAAATCTCTACTTTCAGTCAAACATCGTCACTGACAAGATGATTCGTGTAATTCTGTCCC
TGATAGATGATAGAAGAAAATCACTGCTCAATTGGCCCACAAGATTTAAGATAATCGCTGGTGTAGCCAGGGGACTTCTT
TATCTCCACCAAGATTCCAGATTGACGATGATCCATAGAGATCTCAAAGCAAGCAACATATTGTTGGATGCTGAGATGAT
CCCCAAAATATCAGATTTTGG-------TACGGCTAGGATCTTTAGTGTCAATCAACACGAAGGACATACAAATCGAGTT
GTTGGAACATTGTGAGTAGTGATGAATTTCATTTATGGGATCTCTCAACCTTTGTGCCTTAACTGGTTAATAAGTTTGAA
TTTACCATGGTTAATTGTCAAAGCAGCGGATACATGTCGCCTGAATACGCAATGGAAGGCATCATCTCCGTCAAATCCGA
TGTTTACAGCTTTGGCATATTAGTTCTAGAGATTGTGAGTGGCATGAAGACCGGCGCCACAACCCCGACAAGCTCACGCG
CGCGCACTCATAATCTTATAGATTATGTAAGTGTATTTTACTTTTATTTAGTGATTATGATTTTGTGCATCTTTGGATTT
CTAC-----------------------A-AAAAAACTTTTTTTAGTGATCAGAGCCTACCTGCTCAGCTGATAAGGGGGG
T-----GGGGGGTACTACTGATGAATGACATGATTGGTTTCATGCAGGCGTGGAGCTTAATGAAGGATGGGAAAGTGATG
GATCTAATCGAGTCATCCATCGTTGAGGGTTGCTCTCTCGTTGAAGCTCTACGATGCATCCATATCGGACTCTTGTCGGT
GCAGGACGACCCAGAGGCTCGCCCCCTCATGTCTTGGGTGGTAGCAAGCCTGGATAATGAAGACATTGAGCTCCCGCAGC
CAAAAGAGCCTATGTGCTTTGCACACCGTAACTACGGAGCCGGGGAAAGCCATGTGCATGATATGAGCCTCGTAAACCTC
AAGGGGCGCTAGAAAA-------TCCTGCCTTGTCCTTGACTTGTGA-CCTCATATCTTCATACACGTACCTGCTCAGTG
CTATTCTA------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------
>chr4B_16
TTTTTG--------------TGTGAGGGAGATAGTTAGAATATTAA---TGGAAGATCAAACTTTCTTGACTAAATAATA
CCT----CATG----TTTCAGGGAACGTTGGAAGATGGTAGGGAAATTGCTGTGAAAAGGCTTCGTGTAGGTTCTGTCCA
AGGGGCAGTGGAGTTCAAAAATGAAATAGCACTGATTTCCAGGTTGCAGCATAGAAACTTGGTCAAACTTATAGGCTGCA
GTATTCATGAAGACGAAAAGCTTTTGATTTATGCATACCTACCTAACCGAAGTCTGGATTACTTCATTTTC---AGTACG
TTCT--ACTCACTTGTTGCAAAAATCTCTACTTTCGGTCAAACATCGTCACTGACAAGATGATTCGTGTAATTCTGTCCC
TGATAGATGATAGAAGAAAATCACTGCTCAATTGGCCCACAAGATTTAAGATAATCGCTGGTGTAGCCAGGGGACTTCTT
TATCTCCACCAAGATTCCAGATTGACGATGATTCATAGAGATCTCAAAGCAAGCAACATATTGTTGGATGCTGAGATGAC
CCCCAAAATATCAGATTTTGG-------TACGGCTAGGATCTTTGGTGTCAATCAACACGAAGGACATACAAATCGAGTT
GTTGGAACATTGTGAGTAGTGATGAATTTCATTTATGGGATCCCTCAACTTTTGTGCCTTAACTGGTTAATAAGTTTGAA
TTTACCACGGTTAATTGTCAAAGCAGTGGATACATGTCGCCTGAATATGCAATGGAAGGCATAATCTCCGTCAAATCCGA
TGTTTACAGCTTTGGCGTATTAGTTCTAGAGATTGTGAGTGGCATGAAGACCGGCGCCACAACCCCAACAAGTTCACGCG
CACGCACTCGTAACCTTATAGATTATGTAAGTGTCTTTTACTTTTATTTAGTGAGTATGATTGTATGCATCTTTGG----
---------------------------------AACTTTATTTAGTGATCAGA----ACTTGTTCAACTGATAATTAAGA
A-----GGGGGGTACCACTGATGAATAACATGATTGGTTTGATGCAGGCGTGGAGCTTAAGGAAGGATGGGAAAGTGATG
GATCTAATTGATTCATCCATCGTTGAGGGTTGCTCTCTCGTTGAAGCTCTACGATGCATCCATATCGGACTCTTGTCGGT
GCAGGACGACCCAGAGGCTCGCCCCCTCATGTCTTGGGTGGTAGCAAGCCTGGATAATGAAGACACTGAGCTCCCGCAGC
CAAAAGAGCCTATGTGCTTTGCACACCGTAACTACGGAGCCGGGGAAAGCCATGTGCATGATATGAGCCTCGTAAACCTC
AAGGGGCGCTAGAAAA-------TCCTGCCTTGTCCTTGACTTGTGACCCTCATATCTTCATACACGTACCTGCTCAGTG
CTATTCTA------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------
>chrUn_16
TTTTTG--------------TGCGAGGGAGATAGTTAGAATATTAA---TGGAAGATCAAACTTTCTTGACTAAATAATA
CCT----CATG----TTTCAGGGAACGTTGGAAGATGGTAAGGAAATTGCTGTGAAAAGGCTTCGTGTAGGTTCTGTCCA
AGGGGCAGTGGAGTTCAAAAATGAAATAGCTCTAATTTCCAGGTTGCATCATAGAAACTTGGTCAAACTTATAGGCTGCA
GTATTCATGAAGACGAAAAGCTTTTGATTTATGAATACCTACCTAACCGAAGTCTGGATTACTTCATTTTC---AGTACG
TTCT--ACTCACTTGTTGCAAAAATCTCTACTTTCGGTCAAACATCGTCACTGACAAGATGATTCGTGTAATTCTGTCCT
TGATAGATGATAGAAGAAAATCACTGCTCAATTGGCCCACAAGATTTAAGATAATCGCTGGTGTAGCCAGGGGACTTCTT
TATCTCCACTAAGATTCCAGATTGATGATGATCCATAGAGATCTCAAAGCAAGCAACATATTGTTGGATGCTGTGATGAT
CCCCAAAATATCAGATTTTGG-------TACGGCTAGGATCTTTGGTGTCAATCAACACGAAGAACATACCAATCGAGTT
GTTGGAACATTGTGAGTAGTGATGAATTTCATTTATGGGATCTCTCAACCTTTGTGCCTTAACTGGTTAATAAGTTTGAA
TTTACCATGGTTAATTGTCAAAGCAGCGGATACATGTCGCCTGAATACGCAATGGAAGGCATCATCTCCATCAAATCCGA
TGTTTACAGCTTTGGCGTATTAGTTCTAGAGATTGTGAGTGGCATGAAGACCGGCGCCACAACCCCGACAAGCTCACGCG
CGTGCACTCATAATCTTATAGATTATGTAAGTGTACTTTACTTTTATTTAGTGATTATGATTTTGTGCATCTTTGGATTT
CTAC-----------------------A-AAAAAACTTTTTTTAGTGATCAGAGCCTACCTGCTCAGCTGATAAGGGGGG
TGGGGGGGGGGGTACTACTGATGAATGACATGATTGGTTTCATGCAGGCGTGGAGCTTAATGAAGGATGGGAAAGTGATG
GATCTAATCGAGTCATCCATCGTTGAGGGTTGCTCTCTCGTTGAAGCTCTACGATGCATCCATATCGGACTCTTGTCGGT
GCAGGACGACCCAGAGGCTCGCCCCCTCATGTCTTGGGTGGTAGCAAGCCTGGATAATGAAGACACCGAGCTCCCGCAGC
CAAAAGAGCCTATGTGCTCTGCACACCGTAACTACGGAGCCGGGGAAAGCCATGTGCATGATATGAGCCTCGTAAACCTC
AAGGGGCGCTAGAAAA-------TCCTGCCTTGTCCTTGACTTGTGACCCTCATATCTTCATACGCGTACCTGCTCAGTG
CTATTCTA------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------
>chr5A_25
------------------------AGGGAGATAATTAAATCATTAA---TGAAAGATCTAACTTTCTTCACTCAATAATA
CCTCATGCATG----TTTCAGGGAAGGTTGGCAGATGGTAAGGAAACTGCTATGAAAAGGATTCGTGTAGGTTCTGTCCA
AGGGGCAGCGGATTTCAAAAATGAAATAGCTCTGATTTCCAGGTTGTAGCAGAAAAACTTGGTCAAACTTCTAGGCTGCA
GTATTCATGAATATGAAAAGCTTTTGATTCATGAATACCTACCTAACCGAAGTTTGGATTAATTCATTTTT---AGTAGG
TTCT--GCTCACTTGTTGC-AAAATCTTTACTTTTGGTCAAACATC---ACTGATAAGATGATTTATCTAATTCTGTCCC
TGACAGCTGGTACAGGAAAATCACTGCTAAATTGGTCTACAAGATCTAAGGTAATCAGGGGTGTAGCCAGGGGCCTTCTT
TATCTTCACCAAGATCCCAGGTTGATGATGATTCATAGAGATCTCAAAGCAAGTGACATACTGTTGGATGCTGAGATGAG
CTCCAAAATTTCTGATTTTGGTACAGGCTACAGCTAGGCTCTTTGGTGTCCATGAACAGGAAGGACATACCAATCGAGTT
GTTGGAACATTGTGAGTAGTGAGGAATTTTATTTATGTGATCTCTCAACTTCTGTGCTTCAACTGGTTTATAATTTTAAA
TTTAC---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------
>SNPs
------------S-------S------------------------------------S----------------------
----------------------------SS--------------------------------------------------
S-------------------------------------------------------------------------------
----------------S--------------S----------------S----------------S-----SSS------
------------------S-S-------------S-------------------------S-------------------
----S----------------------------S---------------S------------S-------------S---
-----------S-------S-------------------------------------------------S----S-----
-----------S--------------------S------S----------------------------------S-----
----------------------------S--S---S------------------------S-------------------
-----------------------S--------------------------------------------------------
--------------------------------------------------------------------------------
----------S---------------------S-----------------S-------S-------S-------------
---------S---------S-------SS-----------------S----------------------S----------
--------SSS---------------------------------------------------------------------
-----------S------------S-----------------------S-------------------------------
---------------S----S-------------------------------------------------S----S--S-
-----------------------------------S-----S-S------------------------------------
----S------------S-------S-------------------------S----------------------------
--------SSS------S------------S----------------S----------S----S----------------
--------S--------S-------SS------S----SS---S-----S----------S-----SS------------
-----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_980
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------C
AGAGGCTGCAGGTTATCCTT------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------
>reverse_2263
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------AGCGAGTTGTGGAGATGCAA--------------------------------------
---------------------------------------------------------
