Multiple sequence alignment - TraesCS4D01G352000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G352000 chr4D 100.000 3382 0 0 505 3886 503599409 503596028 0.000000e+00 6246.0
1 TraesCS4D01G352000 chr4D 100.000 324 0 0 1 324 503599913 503599590 2.000000e-167 599.0
2 TraesCS4D01G352000 chr4D 88.923 325 23 10 3485 3806 298967683 298967369 4.710000e-104 388.0
3 TraesCS4D01G352000 chr5A 86.913 1918 170 27 1764 3658 688008179 688006320 0.000000e+00 2076.0
4 TraesCS4D01G352000 chr5A 90.157 447 24 13 715 1146 688009101 688008660 7.290000e-157 564.0
5 TraesCS4D01G352000 chr5A 96.390 277 8 2 1424 1698 210736303 210736027 4.580000e-124 455.0
6 TraesCS4D01G352000 chr5A 91.489 329 22 3 1 324 688011342 688011015 7.660000e-122 448.0
7 TraesCS4D01G352000 chr5A 83.694 509 41 20 2934 3408 706663104 706663604 3.560000e-120 442.0
8 TraesCS4D01G352000 chr5A 90.066 151 12 1 1198 1345 688008448 688008298 3.960000e-45 193.0
9 TraesCS4D01G352000 chr5A 90.244 82 8 0 616 697 545568025 545567944 1.480000e-19 108.0
10 TraesCS4D01G352000 chr5A 96.000 50 2 0 1219 1268 706670697 706670746 8.950000e-12 82.4
11 TraesCS4D01G352000 chr4B 90.677 1448 91 22 2458 3885 649360146 649358723 0.000000e+00 1886.0
12 TraesCS4D01G352000 chr4B 85.690 594 59 13 1820 2398 649360860 649360278 1.540000e-168 603.0
13 TraesCS4D01G352000 chr4B 91.884 345 23 4 802 1146 649361697 649361358 9.770000e-131 477.0
14 TraesCS4D01G352000 chr4B 89.370 254 16 6 2936 3182 667415984 667415735 3.770000e-80 309.0
15 TraesCS4D01G352000 chr4B 79.835 243 26 10 2941 3183 667475240 667475459 5.200000e-34 156.0
16 TraesCS4D01G352000 chr4B 92.105 76 6 0 619 694 462561027 462560952 1.480000e-19 108.0
17 TraesCS4D01G352000 chr4B 100.000 37 0 0 752 788 649361731 649361695 6.970000e-08 69.4
18 TraesCS4D01G352000 chr3A 97.753 267 6 0 1424 1690 58274809 58275075 9.840000e-126 460.0
19 TraesCS4D01G352000 chr3A 97.358 265 7 0 1426 1690 503187755 503188019 5.920000e-123 451.0
20 TraesCS4D01G352000 chr6A 97.398 269 5 2 1429 1697 390514092 390513826 1.270000e-124 457.0
21 TraesCS4D01G352000 chr6A 95.730 281 9 3 1424 1701 169789413 169789133 2.130000e-122 449.0
22 TraesCS4D01G352000 chrUn 97.378 267 7 0 1424 1690 1525426 1525692 4.580000e-124 455.0
23 TraesCS4D01G352000 chrUn 84.510 439 33 16 2934 3343 30109744 30110176 6.050000e-108 401.0
24 TraesCS4D01G352000 chrUn 89.655 58 6 0 1207 1264 29182911 29182854 1.500000e-09 75.0
25 TraesCS4D01G352000 chr2A 96.703 273 7 2 1429 1699 579677277 579677005 1.650000e-123 453.0
26 TraesCS4D01G352000 chr2A 85.671 328 36 8 3483 3806 673316008 673316328 6.220000e-88 335.0
27 TraesCS4D01G352000 chr7A 97.358 265 7 0 1426 1690 139051941 139052205 5.920000e-123 451.0
28 TraesCS4D01G352000 chr7A 86.239 327 38 6 3483 3806 564612079 564611757 7.990000e-92 348.0
29 TraesCS4D01G352000 chr7A 81.818 407 61 10 3419 3817 35678869 35679270 2.890000e-86 329.0
30 TraesCS4D01G352000 chr7A 91.566 83 6 1 616 697 260027063 260026981 3.170000e-21 113.0
31 TraesCS4D01G352000 chr7A 90.244 82 8 0 616 697 730721464 730721545 1.480000e-19 108.0
32 TraesCS4D01G352000 chr1A 97.358 265 7 0 1426 1690 358543290 358543554 5.920000e-123 451.0
33 TraesCS4D01G352000 chr1A 90.244 82 8 0 616 697 588163120 588163201 1.480000e-19 108.0
34 TraesCS4D01G352000 chr1A 90.244 82 8 0 616 697 588199253 588199334 1.480000e-19 108.0
35 TraesCS4D01G352000 chr1A 90.244 82 8 0 616 697 588215578 588215659 1.480000e-19 108.0
36 TraesCS4D01G352000 chr6D 84.119 403 50 10 3411 3806 447815619 447815224 1.020000e-100 377.0
37 TraesCS4D01G352000 chr6D 86.792 318 32 7 3492 3806 357570541 357570231 2.870000e-91 346.0
38 TraesCS4D01G352000 chr2D 87.768 327 34 5 3484 3808 533061676 533061354 1.020000e-100 377.0
39 TraesCS4D01G352000 chr2D 90.244 82 8 0 616 697 78501553 78501634 1.480000e-19 108.0
40 TraesCS4D01G352000 chr3D 85.801 331 34 9 3481 3806 476476123 476476445 4.810000e-89 339.0
41 TraesCS4D01G352000 chr3B 90.244 82 6 1 618 697 477888683 477888602 5.310000e-19 106.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G352000 chr4D 503596028 503599913 3885 True 3422.50 6246 100.00000 1 3886 2 chr4D.!!$R2 3885
1 TraesCS4D01G352000 chr5A 688006320 688011342 5022 True 820.25 2076 89.65625 1 3658 4 chr5A.!!$R3 3657
2 TraesCS4D01G352000 chr5A 706663104 706663604 500 False 442.00 442 83.69400 2934 3408 1 chr5A.!!$F1 474
3 TraesCS4D01G352000 chr4B 649358723 649361731 3008 True 758.85 1886 92.06275 752 3885 4 chr4B.!!$R3 3133

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
970 2513 0.608582 CCCTTTGCTCTGCTCTGCTT 60.609 55.0 0.0 0.0 0.0 3.91 F
1932 3727 0.037697 TTCGTGCAGCAACTCCGTAT 60.038 50.0 0.0 0.0 0.0 3.06 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2063 3870 0.179137 CCTACATCACGCAAGCGAGA 60.179 55.0 22.30 19.01 42.44 4.04 R
3423 5348 0.173481 TTCATGAGCTCGGTCTTCGG 59.827 55.0 9.64 0.00 39.77 4.30 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 2.428530 GCCCCCTTTTCATCATCTTCAC 59.571 50.000 0.00 0.00 0.00 3.18
33 34 2.768253 TCATCTTCACGTTCTGCCAT 57.232 45.000 0.00 0.00 0.00 4.40
64 65 1.467543 CCGACGACGTTGATGTGAGAT 60.468 52.381 16.96 0.00 37.88 2.75
65 66 1.579361 CGACGACGTTGATGTGAGATG 59.421 52.381 10.51 0.00 34.56 2.90
66 67 1.920574 GACGACGTTGATGTGAGATGG 59.079 52.381 10.51 0.00 0.00 3.51
88 89 2.352960 GCCATAGGAAAAGAAGCACTCG 59.647 50.000 0.00 0.00 0.00 4.18
118 119 3.755112 TGTTGGGTCACTCGTAATTGA 57.245 42.857 0.00 0.00 0.00 2.57
156 157 2.223456 TGTGTTTGTCCTCATTGCAACG 60.223 45.455 0.00 0.00 0.00 4.10
185 186 7.038160 TGGACAATTAGCTAGTTAAGGGTACAA 60.038 37.037 12.66 2.00 0.00 2.41
193 194 4.635699 AGTTAAGGGTACAAAGGGTCAG 57.364 45.455 0.00 0.00 0.00 3.51
197 198 1.202891 AGGGTACAAAGGGTCAGCAAC 60.203 52.381 0.00 0.00 0.00 4.17
213 214 4.154015 TCAGCAACCGTAACTTGATGAATG 59.846 41.667 0.00 0.00 40.22 2.67
219 220 7.627513 GCAACCGTAACTTGATGAATGGAATAA 60.628 37.037 0.00 0.00 0.00 1.40
254 255 3.458189 AGGACAGAAAGAAAGACACACG 58.542 45.455 0.00 0.00 0.00 4.49
290 295 8.755977 ACTATATAGTACAAATATTGGACCCCG 58.244 37.037 13.88 0.00 45.93 5.73
297 303 6.442541 ACAAATATTGGACCCCGATATGTA 57.557 37.500 6.52 0.00 39.09 2.29
314 320 6.705825 CGATATGTACCAAATGTCAGATTCCA 59.294 38.462 0.00 0.00 0.00 3.53
319 325 1.402968 CAAATGTCAGATTCCAGGGCG 59.597 52.381 0.00 0.00 0.00 6.13
559 999 4.634012 TTGGCCAGTTTGTACTATGACT 57.366 40.909 5.11 0.00 31.96 3.41
587 1027 6.952773 AAACATAGTTTTGCCTGTGACTAA 57.047 33.333 0.00 0.00 0.00 2.24
600 1040 5.428253 CCTGTGACTAATAAAGCCTAGCAA 58.572 41.667 0.00 0.00 0.00 3.91
601 1041 5.880332 CCTGTGACTAATAAAGCCTAGCAAA 59.120 40.000 0.00 0.00 0.00 3.68
604 1044 6.884295 TGTGACTAATAAAGCCTAGCAAATGT 59.116 34.615 0.00 0.00 0.00 2.71
606 1046 7.065803 GTGACTAATAAAGCCTAGCAAATGTCA 59.934 37.037 0.00 0.00 0.00 3.58
607 1047 7.609918 TGACTAATAAAGCCTAGCAAATGTCAA 59.390 33.333 0.00 0.00 0.00 3.18
608 1048 7.989826 ACTAATAAAGCCTAGCAAATGTCAAG 58.010 34.615 0.00 0.00 0.00 3.02
609 1049 7.829211 ACTAATAAAGCCTAGCAAATGTCAAGA 59.171 33.333 0.00 0.00 0.00 3.02
610 1050 7.651027 AATAAAGCCTAGCAAATGTCAAGAT 57.349 32.000 0.00 0.00 0.00 2.40
611 1051 4.978083 AAGCCTAGCAAATGTCAAGATG 57.022 40.909 0.00 0.00 0.00 2.90
612 1052 4.226427 AGCCTAGCAAATGTCAAGATGA 57.774 40.909 0.00 0.00 0.00 2.92
613 1053 4.789807 AGCCTAGCAAATGTCAAGATGAT 58.210 39.130 0.00 0.00 0.00 2.45
614 1054 5.933617 AGCCTAGCAAATGTCAAGATGATA 58.066 37.500 0.00 0.00 0.00 2.15
615 1055 6.540995 AGCCTAGCAAATGTCAAGATGATAT 58.459 36.000 0.00 0.00 29.01 1.63
616 1056 7.683578 AGCCTAGCAAATGTCAAGATGATATA 58.316 34.615 0.00 0.00 27.79 0.86
617 1057 7.605691 AGCCTAGCAAATGTCAAGATGATATAC 59.394 37.037 0.00 0.00 27.79 1.47
618 1058 7.412346 GCCTAGCAAATGTCAAGATGATATACG 60.412 40.741 0.00 0.00 27.79 3.06
619 1059 6.791887 AGCAAATGTCAAGATGATATACGG 57.208 37.500 0.00 0.00 27.79 4.02
620 1060 6.291377 AGCAAATGTCAAGATGATATACGGT 58.709 36.000 0.00 0.00 27.79 4.83
621 1061 6.203530 AGCAAATGTCAAGATGATATACGGTG 59.796 38.462 0.00 0.00 27.79 4.94
622 1062 6.202762 GCAAATGTCAAGATGATATACGGTGA 59.797 38.462 0.00 0.00 27.79 4.02
623 1063 7.567571 CAAATGTCAAGATGATATACGGTGAC 58.432 38.462 0.00 0.00 35.57 3.67
624 1064 6.656632 ATGTCAAGATGATATACGGTGACT 57.343 37.500 0.00 0.00 35.92 3.41
625 1065 6.465439 TGTCAAGATGATATACGGTGACTT 57.535 37.500 0.00 0.00 35.92 3.01
627 1067 5.625721 GTCAAGATGATATACGGTGACTTCG 59.374 44.000 0.00 0.00 32.94 3.79
628 1068 5.298527 TCAAGATGATATACGGTGACTTCGT 59.701 40.000 0.00 0.00 43.64 3.85
629 1069 6.484308 TCAAGATGATATACGGTGACTTCGTA 59.516 38.462 0.00 0.00 45.30 3.43
630 1070 6.872628 AGATGATATACGGTGACTTCGTAA 57.127 37.500 0.00 0.00 44.57 3.18
631 1071 7.268199 AGATGATATACGGTGACTTCGTAAA 57.732 36.000 0.00 0.00 44.57 2.01
632 1072 7.883217 AGATGATATACGGTGACTTCGTAAAT 58.117 34.615 0.00 0.00 44.57 1.40
633 1073 8.021973 AGATGATATACGGTGACTTCGTAAATC 58.978 37.037 0.00 0.00 44.57 2.17
634 1074 7.268199 TGATATACGGTGACTTCGTAAATCT 57.732 36.000 0.00 0.00 44.57 2.40
635 1075 7.358066 TGATATACGGTGACTTCGTAAATCTC 58.642 38.462 0.00 0.00 44.57 2.75
637 1077 4.247267 ACGGTGACTTCGTAAATCTCAA 57.753 40.909 0.00 0.00 39.22 3.02
639 1079 4.022589 ACGGTGACTTCGTAAATCTCAAGA 60.023 41.667 0.00 0.00 39.22 3.02
640 1080 5.103000 CGGTGACTTCGTAAATCTCAAGAT 58.897 41.667 0.00 0.00 36.07 2.40
642 1082 6.100004 GGTGACTTCGTAAATCTCAAGATGA 58.900 40.000 0.00 0.00 34.49 2.92
643 1083 6.758886 GGTGACTTCGTAAATCTCAAGATGAT 59.241 38.462 0.00 0.00 34.49 2.45
644 1084 7.921214 GGTGACTTCGTAAATCTCAAGATGATA 59.079 37.037 0.00 0.00 34.49 2.15
645 1085 9.469807 GTGACTTCGTAAATCTCAAGATGATAT 57.530 33.333 0.00 0.00 34.49 1.63
648 1088 9.915629 ACTTCGTAAATCTCAAGATGATATACC 57.084 33.333 0.00 0.00 34.49 2.73
649 1089 8.965986 TTCGTAAATCTCAAGATGATATACCG 57.034 34.615 0.00 0.00 34.49 4.02
650 1090 8.331730 TCGTAAATCTCAAGATGATATACCGA 57.668 34.615 0.00 0.00 34.49 4.69
651 1091 8.235226 TCGTAAATCTCAAGATGATATACCGAC 58.765 37.037 0.00 0.00 34.49 4.79
654 1094 7.767250 AATCTCAAGATGATATACCGACTCA 57.233 36.000 0.00 0.00 34.49 3.41
655 1095 6.809630 TCTCAAGATGATATACCGACTCAG 57.190 41.667 0.00 0.00 0.00 3.35
656 1096 6.299922 TCTCAAGATGATATACCGACTCAGT 58.700 40.000 0.00 0.00 0.00 3.41
658 1098 6.299922 TCAAGATGATATACCGACTCAGTCT 58.700 40.000 2.61 0.00 0.00 3.24
659 1099 6.773200 TCAAGATGATATACCGACTCAGTCTT 59.227 38.462 2.61 0.00 0.00 3.01
661 1101 7.589958 AGATGATATACCGACTCAGTCTTTT 57.410 36.000 2.61 0.00 0.00 2.27
662 1102 7.429633 AGATGATATACCGACTCAGTCTTTTG 58.570 38.462 2.61 0.00 0.00 2.44
663 1103 5.902681 TGATATACCGACTCAGTCTTTTGG 58.097 41.667 2.61 0.00 0.00 3.28
664 1104 3.611766 ATACCGACTCAGTCTTTTGGG 57.388 47.619 2.61 0.00 0.00 4.12
666 1106 0.685097 CCGACTCAGTCTTTTGGGGA 59.315 55.000 2.61 0.00 0.00 4.81
667 1107 1.279271 CCGACTCAGTCTTTTGGGGAT 59.721 52.381 2.61 0.00 0.00 3.85
669 1109 2.289694 CGACTCAGTCTTTTGGGGATGT 60.290 50.000 2.61 0.00 0.00 3.06
670 1110 3.756117 GACTCAGTCTTTTGGGGATGTT 58.244 45.455 0.00 0.00 0.00 2.71
673 1113 4.202609 ACTCAGTCTTTTGGGGATGTTCAT 60.203 41.667 0.00 0.00 0.00 2.57
674 1114 5.014123 ACTCAGTCTTTTGGGGATGTTCATA 59.986 40.000 0.00 0.00 0.00 2.15
676 1116 4.641989 CAGTCTTTTGGGGATGTTCATAGG 59.358 45.833 0.00 0.00 0.00 2.57
677 1117 4.540099 AGTCTTTTGGGGATGTTCATAGGA 59.460 41.667 0.00 0.00 0.00 2.94
678 1118 4.884164 GTCTTTTGGGGATGTTCATAGGAG 59.116 45.833 0.00 0.00 0.00 3.69
680 1120 5.729229 TCTTTTGGGGATGTTCATAGGAGTA 59.271 40.000 0.00 0.00 0.00 2.59
682 1122 3.587498 TGGGGATGTTCATAGGAGTAGG 58.413 50.000 0.00 0.00 0.00 3.18
683 1123 2.907042 GGGGATGTTCATAGGAGTAGGG 59.093 54.545 0.00 0.00 0.00 3.53
684 1124 3.588569 GGGATGTTCATAGGAGTAGGGT 58.411 50.000 0.00 0.00 0.00 4.34
685 1125 3.325135 GGGATGTTCATAGGAGTAGGGTG 59.675 52.174 0.00 0.00 0.00 4.61
686 1126 3.967987 GGATGTTCATAGGAGTAGGGTGT 59.032 47.826 0.00 0.00 0.00 4.16
687 1127 4.202264 GGATGTTCATAGGAGTAGGGTGTG 60.202 50.000 0.00 0.00 0.00 3.82
688 1128 3.786553 TGTTCATAGGAGTAGGGTGTGT 58.213 45.455 0.00 0.00 0.00 3.72
689 1129 3.513912 TGTTCATAGGAGTAGGGTGTGTG 59.486 47.826 0.00 0.00 0.00 3.82
691 1131 3.096852 TCATAGGAGTAGGGTGTGTGTG 58.903 50.000 0.00 0.00 0.00 3.82
693 1133 1.374252 GGAGTAGGGTGTGTGTGCG 60.374 63.158 0.00 0.00 0.00 5.34
695 1135 3.411351 GTAGGGTGTGTGTGCGCG 61.411 66.667 0.00 0.00 0.00 6.86
696 1136 3.918977 TAGGGTGTGTGTGCGCGT 61.919 61.111 8.43 0.00 0.00 6.01
697 1137 3.851845 TAGGGTGTGTGTGCGCGTC 62.852 63.158 8.43 0.00 0.00 5.19
699 1139 4.000557 GGTGTGTGTGCGCGTCTG 62.001 66.667 8.43 0.00 0.00 3.51
700 1140 3.261951 GTGTGTGTGCGCGTCTGT 61.262 61.111 8.43 0.00 0.00 3.41
701 1141 1.947146 GTGTGTGTGCGCGTCTGTA 60.947 57.895 8.43 0.00 0.00 2.74
702 1142 1.947146 TGTGTGTGCGCGTCTGTAC 60.947 57.895 8.43 2.89 0.00 2.90
703 1143 1.660575 GTGTGTGCGCGTCTGTACT 60.661 57.895 8.43 0.00 0.00 2.73
704 1144 1.660264 TGTGTGCGCGTCTGTACTG 60.660 57.895 8.43 0.00 0.00 2.74
705 1145 1.660575 GTGTGCGCGTCTGTACTGT 60.661 57.895 8.43 0.00 0.00 3.55
708 1148 2.430921 GCGCGTCTGTACTGTGCT 60.431 61.111 8.43 0.00 34.79 4.40
709 1149 1.154093 GCGCGTCTGTACTGTGCTA 60.154 57.895 8.43 0.00 34.79 3.49
710 1150 0.731514 GCGCGTCTGTACTGTGCTAA 60.732 55.000 8.43 0.00 34.79 3.09
712 1152 2.055838 CGCGTCTGTACTGTGCTAAAA 58.944 47.619 0.00 0.00 0.00 1.52
713 1153 2.473609 CGCGTCTGTACTGTGCTAAAAA 59.526 45.455 0.00 0.00 0.00 1.94
714 1154 3.122948 CGCGTCTGTACTGTGCTAAAAAT 59.877 43.478 0.00 0.00 0.00 1.82
715 1155 4.325204 CGCGTCTGTACTGTGCTAAAAATA 59.675 41.667 0.00 0.00 0.00 1.40
716 1156 5.164031 CGCGTCTGTACTGTGCTAAAAATAA 60.164 40.000 0.00 0.00 0.00 1.40
717 1157 6.455113 CGCGTCTGTACTGTGCTAAAAATAAT 60.455 38.462 0.00 0.00 0.00 1.28
746 2275 1.715585 CCGCTGCCATGTTTCGTAG 59.284 57.895 0.00 0.00 0.00 3.51
789 2318 2.282040 ACTTGTCAGGCAGGCAGC 60.282 61.111 0.00 0.00 44.65 5.25
816 2345 3.264159 CTGCATCCAATCGCGCGA 61.264 61.111 36.65 36.65 0.00 5.87
888 2417 0.611714 GTACGCCTCCTCCCTCAAAA 59.388 55.000 0.00 0.00 0.00 2.44
892 2421 1.762957 CGCCTCCTCCCTCAAAAGATA 59.237 52.381 0.00 0.00 0.00 1.98
910 2439 8.995906 CAAAAGATAAAAATAAAGTACGCCTCG 58.004 33.333 0.00 0.00 0.00 4.63
949 2478 4.452795 CCCTTTTCTTTCTTCGTCTTCTCC 59.547 45.833 0.00 0.00 0.00 3.71
951 2480 5.050023 CCTTTTCTTTCTTCGTCTTCTCCAC 60.050 44.000 0.00 0.00 0.00 4.02
956 2499 2.326428 TCTTCGTCTTCTCCACCCTTT 58.674 47.619 0.00 0.00 0.00 3.11
957 2500 2.037251 TCTTCGTCTTCTCCACCCTTTG 59.963 50.000 0.00 0.00 0.00 2.77
970 2513 0.608582 CCCTTTGCTCTGCTCTGCTT 60.609 55.000 0.00 0.00 0.00 3.91
1035 2579 2.124653 TCGGCCTCCTCGTCTCTC 60.125 66.667 0.00 0.00 0.00 3.20
1098 2642 2.046292 CTCTTCCCCTCTTCTCCATCC 58.954 57.143 0.00 0.00 0.00 3.51
1102 2646 1.348775 CCCCTCTTCTCCATCCACCC 61.349 65.000 0.00 0.00 0.00 4.61
1138 2682 4.884247 AGAAAATCGACGGAAGATATCCC 58.116 43.478 0.00 0.00 46.39 3.85
1156 2720 3.127533 GATTTCTGGCGCCGTGCT 61.128 61.111 23.90 4.82 45.43 4.40
1212 2917 0.686441 TCGATCTTGGTCCGATGGGT 60.686 55.000 0.00 0.00 33.83 4.51
1217 2922 3.599285 TTGGTCCGATGGGTGACGC 62.599 63.158 0.00 0.00 32.19 5.19
1272 2982 5.869888 CGCCAAGGTAATCTAATCTATCCAC 59.130 44.000 0.00 0.00 0.00 4.02
1281 2991 3.821600 TCTAATCTATCCACGCCTGACTC 59.178 47.826 0.00 0.00 0.00 3.36
1292 3002 3.070018 ACGCCTGACTCTTTTTCTGATG 58.930 45.455 0.00 0.00 0.00 3.07
1378 3164 2.992593 TGCCAATCGCCATACAAGTTA 58.007 42.857 0.00 0.00 36.24 2.24
1383 3169 6.095580 TGCCAATCGCCATACAAGTTAAATTA 59.904 34.615 0.00 0.00 36.24 1.40
1416 3202 2.355197 ACAAACAAAGCCAGGCAAAAC 58.645 42.857 15.80 0.00 0.00 2.43
1417 3203 2.289945 ACAAACAAAGCCAGGCAAAACA 60.290 40.909 15.80 0.00 0.00 2.83
1418 3204 2.022764 AACAAAGCCAGGCAAAACAC 57.977 45.000 15.80 0.00 0.00 3.32
1421 3207 1.130777 AAAGCCAGGCAAAACACCAT 58.869 45.000 15.80 0.00 0.00 3.55
1422 3208 2.008242 AAGCCAGGCAAAACACCATA 57.992 45.000 15.80 0.00 0.00 2.74
1423 3209 2.236489 AGCCAGGCAAAACACCATAT 57.764 45.000 15.80 0.00 0.00 1.78
1424 3210 3.380471 AGCCAGGCAAAACACCATATA 57.620 42.857 15.80 0.00 0.00 0.86
1425 3211 3.914771 AGCCAGGCAAAACACCATATAT 58.085 40.909 15.80 0.00 0.00 0.86
1426 3212 5.060427 AGCCAGGCAAAACACCATATATA 57.940 39.130 15.80 0.00 0.00 0.86
1427 3213 5.454062 AGCCAGGCAAAACACCATATATAA 58.546 37.500 15.80 0.00 0.00 0.98
1428 3214 6.077322 AGCCAGGCAAAACACCATATATAAT 58.923 36.000 15.80 0.00 0.00 1.28
1429 3215 7.237982 AGCCAGGCAAAACACCATATATAATA 58.762 34.615 15.80 0.00 0.00 0.98
1430 3216 7.176690 AGCCAGGCAAAACACCATATATAATAC 59.823 37.037 15.80 0.00 0.00 1.89
1431 3217 7.176690 GCCAGGCAAAACACCATATATAATACT 59.823 37.037 6.55 0.00 0.00 2.12
1432 3218 8.730680 CCAGGCAAAACACCATATATAATACTC 58.269 37.037 0.00 0.00 0.00 2.59
1433 3219 8.730680 CAGGCAAAACACCATATATAATACTCC 58.269 37.037 0.00 0.00 0.00 3.85
1434 3220 7.888546 AGGCAAAACACCATATATAATACTCCC 59.111 37.037 0.00 0.00 0.00 4.30
1435 3221 7.888546 GGCAAAACACCATATATAATACTCCCT 59.111 37.037 0.00 0.00 0.00 4.20
1436 3222 8.947115 GCAAAACACCATATATAATACTCCCTC 58.053 37.037 0.00 0.00 0.00 4.30
1437 3223 9.449719 CAAAACACCATATATAATACTCCCTCC 57.550 37.037 0.00 0.00 0.00 4.30
1438 3224 7.419711 AACACCATATATAATACTCCCTCCG 57.580 40.000 0.00 0.00 0.00 4.63
1439 3225 5.897824 ACACCATATATAATACTCCCTCCGG 59.102 44.000 0.00 0.00 0.00 5.14
1440 3226 5.897824 CACCATATATAATACTCCCTCCGGT 59.102 44.000 0.00 0.00 0.00 5.28
1441 3227 6.040616 CACCATATATAATACTCCCTCCGGTC 59.959 46.154 0.00 0.00 0.00 4.79
1442 3228 5.539193 CCATATATAATACTCCCTCCGGTCC 59.461 48.000 0.00 0.00 0.00 4.46
1443 3229 4.969136 ATATAATACTCCCTCCGGTCCT 57.031 45.455 0.00 0.00 0.00 3.85
1444 3230 3.632420 ATAATACTCCCTCCGGTCCTT 57.368 47.619 0.00 0.00 0.00 3.36
1445 3231 2.265526 AATACTCCCTCCGGTCCTTT 57.734 50.000 0.00 0.00 0.00 3.11
1446 3232 2.265526 ATACTCCCTCCGGTCCTTTT 57.734 50.000 0.00 0.00 0.00 2.27
1447 3233 2.034436 TACTCCCTCCGGTCCTTTTT 57.966 50.000 0.00 0.00 0.00 1.94
1448 3234 2.034436 ACTCCCTCCGGTCCTTTTTA 57.966 50.000 0.00 0.00 0.00 1.52
1449 3235 1.627329 ACTCCCTCCGGTCCTTTTTAC 59.373 52.381 0.00 0.00 0.00 2.01
1450 3236 1.907255 CTCCCTCCGGTCCTTTTTACT 59.093 52.381 0.00 0.00 0.00 2.24
1451 3237 1.904537 TCCCTCCGGTCCTTTTTACTC 59.095 52.381 0.00 0.00 0.00 2.59
1452 3238 1.907255 CCCTCCGGTCCTTTTTACTCT 59.093 52.381 0.00 0.00 0.00 3.24
1453 3239 2.354805 CCCTCCGGTCCTTTTTACTCTG 60.355 54.545 0.00 0.00 0.00 3.35
1454 3240 2.347731 CTCCGGTCCTTTTTACTCTGC 58.652 52.381 0.00 0.00 0.00 4.26
1455 3241 1.695242 TCCGGTCCTTTTTACTCTGCA 59.305 47.619 0.00 0.00 0.00 4.41
1456 3242 2.304761 TCCGGTCCTTTTTACTCTGCAT 59.695 45.455 0.00 0.00 0.00 3.96
1457 3243 3.516300 TCCGGTCCTTTTTACTCTGCATA 59.484 43.478 0.00 0.00 0.00 3.14
1458 3244 4.163458 TCCGGTCCTTTTTACTCTGCATAT 59.837 41.667 0.00 0.00 0.00 1.78
1459 3245 4.881850 CCGGTCCTTTTTACTCTGCATATT 59.118 41.667 0.00 0.00 0.00 1.28
1460 3246 6.053005 CCGGTCCTTTTTACTCTGCATATTA 58.947 40.000 0.00 0.00 0.00 0.98
1461 3247 6.202954 CCGGTCCTTTTTACTCTGCATATTAG 59.797 42.308 0.00 0.00 0.00 1.73
1462 3248 6.202954 CGGTCCTTTTTACTCTGCATATTAGG 59.797 42.308 0.00 0.00 0.00 2.69
1463 3249 7.054751 GGTCCTTTTTACTCTGCATATTAGGT 58.945 38.462 0.00 0.00 0.00 3.08
1464 3250 7.556635 GGTCCTTTTTACTCTGCATATTAGGTT 59.443 37.037 0.00 0.00 0.00 3.50
1465 3251 8.957466 GTCCTTTTTACTCTGCATATTAGGTTT 58.043 33.333 0.00 0.00 0.00 3.27
1466 3252 8.956426 TCCTTTTTACTCTGCATATTAGGTTTG 58.044 33.333 0.00 0.00 0.00 2.93
1467 3253 8.739972 CCTTTTTACTCTGCATATTAGGTTTGT 58.260 33.333 0.00 0.00 0.00 2.83
1468 3254 9.774742 CTTTTTACTCTGCATATTAGGTTTGTC 57.225 33.333 0.00 0.00 0.00 3.18
1469 3255 9.515226 TTTTTACTCTGCATATTAGGTTTGTCT 57.485 29.630 0.00 0.00 0.00 3.41
1470 3256 8.492673 TTTACTCTGCATATTAGGTTTGTCTG 57.507 34.615 0.00 0.00 0.00 3.51
1471 3257 6.299805 ACTCTGCATATTAGGTTTGTCTGA 57.700 37.500 0.00 0.00 0.00 3.27
1472 3258 6.711277 ACTCTGCATATTAGGTTTGTCTGAA 58.289 36.000 0.00 0.00 0.00 3.02
1473 3259 6.820656 ACTCTGCATATTAGGTTTGTCTGAAG 59.179 38.462 0.00 0.00 0.00 3.02
1474 3260 6.711277 TCTGCATATTAGGTTTGTCTGAAGT 58.289 36.000 0.00 0.00 0.00 3.01
1475 3261 6.818644 TCTGCATATTAGGTTTGTCTGAAGTC 59.181 38.462 0.00 0.00 0.00 3.01
1476 3262 6.472016 TGCATATTAGGTTTGTCTGAAGTCA 58.528 36.000 0.00 0.00 0.00 3.41
1477 3263 6.939730 TGCATATTAGGTTTGTCTGAAGTCAA 59.060 34.615 0.00 0.00 0.00 3.18
1478 3264 7.611467 TGCATATTAGGTTTGTCTGAAGTCAAT 59.389 33.333 0.00 0.00 0.00 2.57
1479 3265 8.125448 GCATATTAGGTTTGTCTGAAGTCAATC 58.875 37.037 0.00 0.00 0.00 2.67
1480 3266 9.388506 CATATTAGGTTTGTCTGAAGTCAATCT 57.611 33.333 0.00 0.00 0.00 2.40
1481 3267 7.913674 ATTAGGTTTGTCTGAAGTCAATCTC 57.086 36.000 0.00 0.00 0.00 2.75
1482 3268 5.296151 AGGTTTGTCTGAAGTCAATCTCA 57.704 39.130 0.00 0.00 0.00 3.27
1483 3269 5.874093 AGGTTTGTCTGAAGTCAATCTCAT 58.126 37.500 0.00 0.00 0.00 2.90
1484 3270 5.936956 AGGTTTGTCTGAAGTCAATCTCATC 59.063 40.000 0.00 0.00 0.00 2.92
1485 3271 5.123027 GGTTTGTCTGAAGTCAATCTCATCC 59.877 44.000 0.00 0.00 0.00 3.51
1486 3272 5.488262 TTGTCTGAAGTCAATCTCATCCA 57.512 39.130 0.00 0.00 0.00 3.41
1487 3273 5.488262 TGTCTGAAGTCAATCTCATCCAA 57.512 39.130 0.00 0.00 0.00 3.53
1488 3274 5.240891 TGTCTGAAGTCAATCTCATCCAAC 58.759 41.667 0.00 0.00 0.00 3.77
1489 3275 5.012458 TGTCTGAAGTCAATCTCATCCAACT 59.988 40.000 0.00 0.00 0.00 3.16
1490 3276 5.936956 GTCTGAAGTCAATCTCATCCAACTT 59.063 40.000 0.00 0.00 0.00 2.66
1491 3277 6.429385 GTCTGAAGTCAATCTCATCCAACTTT 59.571 38.462 0.00 0.00 0.00 2.66
1492 3278 6.429078 TCTGAAGTCAATCTCATCCAACTTTG 59.571 38.462 0.00 0.00 0.00 2.77
1493 3279 6.298361 TGAAGTCAATCTCATCCAACTTTGA 58.702 36.000 0.00 0.00 0.00 2.69
1494 3280 6.205464 TGAAGTCAATCTCATCCAACTTTGAC 59.795 38.462 5.67 5.67 41.88 3.18
1495 3281 5.006386 AGTCAATCTCATCCAACTTTGACC 58.994 41.667 9.31 0.00 42.29 4.02
1496 3282 4.761739 GTCAATCTCATCCAACTTTGACCA 59.238 41.667 0.00 0.00 37.86 4.02
1497 3283 5.241506 GTCAATCTCATCCAACTTTGACCAA 59.758 40.000 0.00 0.00 37.86 3.67
1498 3284 5.474532 TCAATCTCATCCAACTTTGACCAAG 59.525 40.000 0.00 0.00 38.64 3.61
1537 3323 9.679661 ATTATAGACATTCACATAACAACACCA 57.320 29.630 0.00 0.00 0.00 4.17
1538 3324 7.994425 ATAGACATTCACATAACAACACCAA 57.006 32.000 0.00 0.00 0.00 3.67
1539 3325 6.899393 AGACATTCACATAACAACACCAAT 57.101 33.333 0.00 0.00 0.00 3.16
1540 3326 7.994425 AGACATTCACATAACAACACCAATA 57.006 32.000 0.00 0.00 0.00 1.90
1541 3327 8.579850 AGACATTCACATAACAACACCAATAT 57.420 30.769 0.00 0.00 0.00 1.28
1542 3328 8.677300 AGACATTCACATAACAACACCAATATC 58.323 33.333 0.00 0.00 0.00 1.63
1543 3329 8.347004 ACATTCACATAACAACACCAATATCA 57.653 30.769 0.00 0.00 0.00 2.15
1544 3330 8.970020 ACATTCACATAACAACACCAATATCAT 58.030 29.630 0.00 0.00 0.00 2.45
1545 3331 9.806203 CATTCACATAACAACACCAATATCATT 57.194 29.630 0.00 0.00 0.00 2.57
1548 3334 9.898152 TCACATAACAACACCAATATCATTAGA 57.102 29.630 0.00 0.00 0.00 2.10
1649 3435 5.169836 ACTTAGCAAAGTTTGACTTTCGG 57.830 39.130 19.82 8.79 44.47 4.30
1650 3436 2.492019 AGCAAAGTTTGACTTTCGGC 57.508 45.000 19.82 5.65 44.47 5.54
1651 3437 1.748493 AGCAAAGTTTGACTTTCGGCA 59.252 42.857 19.82 0.00 44.47 5.69
1652 3438 2.165437 AGCAAAGTTTGACTTTCGGCAA 59.835 40.909 19.82 0.00 44.47 4.52
1653 3439 2.926838 GCAAAGTTTGACTTTCGGCAAA 59.073 40.909 19.82 0.00 44.47 3.68
1654 3440 3.555547 GCAAAGTTTGACTTTCGGCAAAT 59.444 39.130 19.82 0.00 44.47 2.32
1655 3441 4.318050 GCAAAGTTTGACTTTCGGCAAATC 60.318 41.667 19.82 0.00 44.47 2.17
1656 3442 3.643159 AGTTTGACTTTCGGCAAATCC 57.357 42.857 0.00 0.00 36.51 3.01
1657 3443 2.955660 AGTTTGACTTTCGGCAAATCCA 59.044 40.909 0.00 0.00 36.51 3.41
1658 3444 3.383185 AGTTTGACTTTCGGCAAATCCAA 59.617 39.130 0.00 0.00 36.51 3.53
1659 3445 4.039124 AGTTTGACTTTCGGCAAATCCAAT 59.961 37.500 0.00 0.00 36.51 3.16
1660 3446 3.574284 TGACTTTCGGCAAATCCAATG 57.426 42.857 0.00 0.00 34.01 2.82
1661 3447 2.890311 TGACTTTCGGCAAATCCAATGT 59.110 40.909 0.00 0.00 34.01 2.71
1662 3448 3.244976 GACTTTCGGCAAATCCAATGTG 58.755 45.455 0.00 0.00 34.01 3.21
1663 3449 1.994779 CTTTCGGCAAATCCAATGTGC 59.005 47.619 0.00 0.00 37.55 4.57
1664 3450 0.964700 TTCGGCAAATCCAATGTGCA 59.035 45.000 4.59 0.00 40.12 4.57
1665 3451 0.527113 TCGGCAAATCCAATGTGCAG 59.473 50.000 4.59 0.65 40.12 4.41
1666 3452 0.527113 CGGCAAATCCAATGTGCAGA 59.473 50.000 4.59 0.00 40.12 4.26
1667 3453 1.468565 CGGCAAATCCAATGTGCAGAG 60.469 52.381 4.59 0.00 40.12 3.35
1668 3454 1.547372 GGCAAATCCAATGTGCAGAGT 59.453 47.619 4.59 0.00 40.12 3.24
1669 3455 2.754552 GGCAAATCCAATGTGCAGAGTA 59.245 45.455 4.59 0.00 40.12 2.59
1670 3456 3.193267 GGCAAATCCAATGTGCAGAGTAA 59.807 43.478 4.59 0.00 40.12 2.24
1671 3457 4.321899 GGCAAATCCAATGTGCAGAGTAAA 60.322 41.667 4.59 0.00 40.12 2.01
1672 3458 5.229423 GCAAATCCAATGTGCAGAGTAAAA 58.771 37.500 0.00 0.00 38.19 1.52
1673 3459 5.695816 GCAAATCCAATGTGCAGAGTAAAAA 59.304 36.000 0.00 0.00 38.19 1.94
1674 3460 6.128742 GCAAATCCAATGTGCAGAGTAAAAAG 60.129 38.462 0.00 0.00 38.19 2.27
1675 3461 5.649782 ATCCAATGTGCAGAGTAAAAAGG 57.350 39.130 0.00 0.00 0.00 3.11
1676 3462 4.724399 TCCAATGTGCAGAGTAAAAAGGA 58.276 39.130 0.00 0.00 0.00 3.36
1677 3463 4.518970 TCCAATGTGCAGAGTAAAAAGGAC 59.481 41.667 0.00 0.00 0.00 3.85
1678 3464 4.321230 CCAATGTGCAGAGTAAAAAGGACC 60.321 45.833 0.00 0.00 0.00 4.46
1679 3465 2.489971 TGTGCAGAGTAAAAAGGACCG 58.510 47.619 0.00 0.00 0.00 4.79
1680 3466 1.197036 GTGCAGAGTAAAAAGGACCGC 59.803 52.381 0.00 0.00 0.00 5.68
1681 3467 1.202710 TGCAGAGTAAAAAGGACCGCA 60.203 47.619 0.00 0.00 0.00 5.69
1682 3468 1.464997 GCAGAGTAAAAAGGACCGCAG 59.535 52.381 0.00 0.00 0.00 5.18
1700 3486 5.049398 CGCAGGGAGTACTAGTAATCATC 57.951 47.826 26.57 18.94 32.33 2.92
1701 3487 4.082679 CGCAGGGAGTACTAGTAATCATCC 60.083 50.000 26.57 20.19 32.33 3.51
1702 3488 5.081032 GCAGGGAGTACTAGTAATCATCCT 58.919 45.833 26.57 21.73 32.33 3.24
1703 3489 5.047660 GCAGGGAGTACTAGTAATCATCCTG 60.048 48.000 30.98 30.98 39.91 3.86
1704 3490 5.478679 CAGGGAGTACTAGTAATCATCCTGG 59.521 48.000 29.35 19.06 36.67 4.45
1705 3491 5.375956 AGGGAGTACTAGTAATCATCCTGGA 59.624 44.000 26.57 0.00 32.33 3.86
1706 3492 5.477637 GGGAGTACTAGTAATCATCCTGGAC 59.522 48.000 26.57 10.44 32.33 4.02
1707 3493 6.069331 GGAGTACTAGTAATCATCCTGGACA 58.931 44.000 26.57 0.00 32.33 4.02
1708 3494 6.722129 GGAGTACTAGTAATCATCCTGGACAT 59.278 42.308 26.57 0.00 32.33 3.06
1709 3495 7.233757 GGAGTACTAGTAATCATCCTGGACATT 59.766 40.741 26.57 3.19 32.33 2.71
1710 3496 8.554490 AGTACTAGTAATCATCCTGGACATTT 57.446 34.615 3.61 0.00 0.00 2.32
1711 3497 8.424918 AGTACTAGTAATCATCCTGGACATTTG 58.575 37.037 3.61 0.00 0.00 2.32
1712 3498 7.200434 ACTAGTAATCATCCTGGACATTTGT 57.800 36.000 0.00 0.00 0.00 2.83
1713 3499 7.275920 ACTAGTAATCATCCTGGACATTTGTC 58.724 38.462 0.00 1.99 44.04 3.18
1727 3513 5.873732 GACATTTGTCCAGTATTCTCTTGC 58.126 41.667 0.00 0.00 39.07 4.01
1748 3534 4.756642 TGCAATCACCTCTCTTTTACTGTG 59.243 41.667 0.00 0.00 0.00 3.66
1752 3538 3.323979 TCACCTCTCTTTTACTGTGGGAC 59.676 47.826 0.00 0.00 0.00 4.46
1780 3574 7.707893 GCTATCCAATGAGTTAATTTTGCATGT 59.292 33.333 0.00 0.00 0.00 3.21
1801 3595 7.816995 GCATGTAAATGGAAATGACCTGTAAAA 59.183 33.333 0.00 0.00 0.00 1.52
1814 3608 8.599624 ATGACCTGTAAAATGGAAAATGATCT 57.400 30.769 0.00 0.00 0.00 2.75
1909 3704 0.107456 ACATAAGCTCCATGGAGGCG 59.893 55.000 36.92 18.26 42.19 5.52
1931 3726 0.666274 CTTCGTGCAGCAACTCCGTA 60.666 55.000 0.00 0.00 0.00 4.02
1932 3727 0.037697 TTCGTGCAGCAACTCCGTAT 60.038 50.000 0.00 0.00 0.00 3.06
1933 3728 0.812549 TCGTGCAGCAACTCCGTATA 59.187 50.000 0.00 0.00 0.00 1.47
1934 3729 0.921347 CGTGCAGCAACTCCGTATAC 59.079 55.000 0.00 0.00 0.00 1.47
1935 3730 0.921347 GTGCAGCAACTCCGTATACG 59.079 55.000 18.40 18.40 39.44 3.06
1936 3731 0.528924 TGCAGCAACTCCGTATACGT 59.471 50.000 22.87 2.71 37.74 3.57
1937 3732 1.744522 TGCAGCAACTCCGTATACGTA 59.255 47.619 22.87 7.48 37.74 3.57
1938 3733 2.223409 TGCAGCAACTCCGTATACGTAG 60.223 50.000 22.87 19.16 37.74 3.51
1958 3753 1.067776 GTAGCCGACAGTTACAGCACT 60.068 52.381 0.00 0.00 0.00 4.40
2026 3833 2.865492 GCTCAAAGCCCTCCAAGAG 58.135 57.895 0.00 0.00 34.48 2.85
2046 3853 1.433064 GAGCCTCAGACGAGCTCAG 59.567 63.158 15.40 9.21 39.86 3.35
2050 3857 0.679640 CCTCAGACGAGCTCAGGTCT 60.680 60.000 16.01 16.01 43.99 3.85
2062 3869 1.315690 TCAGGTCTGAGACGAACGTT 58.684 50.000 0.00 0.00 34.14 3.99
2063 3870 1.679680 TCAGGTCTGAGACGAACGTTT 59.320 47.619 6.50 0.00 34.14 3.60
2070 3877 1.268896 TGAGACGAACGTTTCTCGCTT 60.269 47.619 19.84 5.40 41.13 4.68
2075 3882 0.718220 GAACGTTTCTCGCTTGCGTG 60.718 55.000 14.70 12.39 44.19 5.34
2080 3887 1.724623 GTTTCTCGCTTGCGTGATGTA 59.275 47.619 18.06 3.74 0.00 2.29
2092 3899 1.674441 CGTGATGTAGGCGTAAGAGGA 59.326 52.381 0.00 0.00 43.02 3.71
2107 3914 2.764128 GGACTGCCCGAGGATCCA 60.764 66.667 15.82 0.00 0.00 3.41
2152 3959 5.048991 ACACAAAGATTATTCCGGTGTGAAC 60.049 40.000 19.27 2.45 38.55 3.18
2171 3978 1.300620 CGTCGTGGTGATGTGGTGT 60.301 57.895 0.00 0.00 0.00 4.16
2188 3995 2.434185 TGTGCTTCGGCCGATGAC 60.434 61.111 37.00 29.47 40.91 3.06
2203 4010 1.407979 GATGACGGTGAATCGGGTACT 59.592 52.381 0.00 0.00 0.00 2.73
2215 4022 1.745087 TCGGGTACTGATACGGTTCAC 59.255 52.381 0.00 0.00 39.80 3.18
2231 4038 4.504858 GGTTCACAAGACTTATCGGACAT 58.495 43.478 0.00 0.00 0.00 3.06
2247 4054 3.493350 CGGACATATGGAAGAGAAGTGGG 60.493 52.174 7.80 0.00 0.00 4.61
2253 4060 3.243359 TGGAAGAGAAGTGGGCATTTT 57.757 42.857 0.00 0.00 0.00 1.82
2275 4082 1.669795 GCTGGCGAAAATCTTGTTGGG 60.670 52.381 0.00 0.00 0.00 4.12
2298 4105 5.163550 GGAAAAGCTCAGGTTGTTACACTTT 60.164 40.000 0.00 0.00 0.00 2.66
2299 4106 5.500645 AAAGCTCAGGTTGTTACACTTTC 57.499 39.130 0.00 0.00 0.00 2.62
2319 4126 6.865205 ACTTTCTTATCTTGTTTGCAGATTGC 59.135 34.615 0.00 0.00 45.29 3.56
2325 4132 3.638160 TCTTGTTTGCAGATTGCTTCCTT 59.362 39.130 2.48 0.00 45.31 3.36
2327 4134 3.225104 TGTTTGCAGATTGCTTCCTTCT 58.775 40.909 2.48 0.00 45.31 2.85
2332 4139 5.357742 TGCAGATTGCTTCCTTCTGTATA 57.642 39.130 2.48 0.00 45.31 1.47
2339 4146 8.897752 AGATTGCTTCCTTCTGTATATGTTTTC 58.102 33.333 0.00 0.00 0.00 2.29
2344 4151 8.178313 GCTTCCTTCTGTATATGTTTTCTTCAC 58.822 37.037 0.00 0.00 0.00 3.18
2352 4159 9.599322 CTGTATATGTTTTCTTCACTTTGACAC 57.401 33.333 0.00 0.00 0.00 3.67
2360 4167 5.545658 TCTTCACTTTGACACAAGTTCAC 57.454 39.130 1.70 0.00 0.00 3.18
2361 4168 5.245531 TCTTCACTTTGACACAAGTTCACT 58.754 37.500 1.70 0.00 0.00 3.41
2363 4170 6.312918 TCTTCACTTTGACACAAGTTCACTAC 59.687 38.462 1.70 0.00 0.00 2.73
2366 4173 5.351465 CACTTTGACACAAGTTCACTACTGT 59.649 40.000 1.70 0.00 37.12 3.55
2368 4175 5.794687 TTGACACAAGTTCACTACTGTTG 57.205 39.130 0.00 0.00 37.12 3.33
2370 4177 5.242434 TGACACAAGTTCACTACTGTTGTT 58.758 37.500 0.00 0.00 37.12 2.83
2382 4189 2.652662 CTGTTGTTCAGTGTTCGCTC 57.347 50.000 0.00 0.00 39.17 5.03
2398 4205 4.884458 TCGCTCACTGTTAGTCTGATAG 57.116 45.455 0.00 0.00 0.00 2.08
2399 4206 4.262617 TCGCTCACTGTTAGTCTGATAGT 58.737 43.478 0.00 0.00 0.00 2.12
2401 4208 6.056236 TCGCTCACTGTTAGTCTGATAGTAT 58.944 40.000 0.00 0.00 0.00 2.12
2402 4209 6.017852 TCGCTCACTGTTAGTCTGATAGTATG 60.018 42.308 0.00 0.00 0.00 2.39
2403 4210 6.017852 CGCTCACTGTTAGTCTGATAGTATGA 60.018 42.308 0.00 0.00 0.00 2.15
2404 4211 7.467403 CGCTCACTGTTAGTCTGATAGTATGAA 60.467 40.741 0.00 0.00 0.00 2.57
2405 4212 8.356657 GCTCACTGTTAGTCTGATAGTATGAAT 58.643 37.037 0.00 0.00 0.00 2.57
2423 4230 9.256228 AGTATGAATTACTCCTAGAAAGTGTCA 57.744 33.333 7.72 8.39 36.34 3.58
2525 4416 2.203209 CCAGGCCGCTGGTATTCC 60.203 66.667 2.74 0.00 39.56 3.01
2533 4424 2.811873 GCCGCTGGTATTCCTCATGATT 60.812 50.000 0.00 0.00 34.23 2.57
2534 4425 3.480470 CCGCTGGTATTCCTCATGATTT 58.520 45.455 0.00 0.00 34.23 2.17
2636 4527 5.356190 CCATGTTTGATGCATTGTCTAGAGT 59.644 40.000 0.00 0.00 0.00 3.24
2771 4662 5.940617 TCTGGTCAGAATTTTCCTGAAGAA 58.059 37.500 0.00 0.00 41.72 2.52
2780 4671 6.488344 AGAATTTTCCTGAAGAAGAGGTTCAC 59.512 38.462 0.00 0.00 35.40 3.18
2797 4688 0.524862 CACTCCATTGCTCAGCCAAC 59.475 55.000 0.00 0.00 0.00 3.77
2908 4799 3.829601 AGGCCAATGTATGTTTTCCGAAA 59.170 39.130 5.01 0.00 0.00 3.46
3118 5016 1.954362 ATCTGCGAGAGTGGAGGTGC 61.954 60.000 0.00 0.00 0.00 5.01
3119 5017 3.978723 CTGCGAGAGTGGAGGTGCG 62.979 68.421 0.00 0.00 0.00 5.34
3120 5018 3.749064 GCGAGAGTGGAGGTGCGA 61.749 66.667 0.00 0.00 0.00 5.10
3146 5044 1.031235 TGATGCCTTGTGTTGGTGTG 58.969 50.000 0.00 0.00 0.00 3.82
3425 5350 3.614143 GCCGAGAATAGCGTTCCG 58.386 61.111 1.88 5.45 0.00 4.30
3682 5622 7.758980 TGTATGTTCATGGAATTTTGTACATGC 59.241 33.333 0.00 13.43 40.26 4.06
3851 5792 4.465632 TTTCATCCGGTCCATATATCGG 57.534 45.455 0.00 4.58 43.42 4.18
3852 5793 2.384828 TCATCCGGTCCATATATCGGG 58.615 52.381 0.00 1.60 42.44 5.14
3862 5803 4.342665 GTCCATATATCGGGGATCTTCTCC 59.657 50.000 0.00 0.00 44.11 3.71
3869 5810 3.551259 GGGATCTTCTCCGCAACAA 57.449 52.632 0.00 0.00 46.01 2.83
3885 5830 4.495349 CGCAACAAATCAGAAGGCAGATAG 60.495 45.833 0.00 0.00 0.00 2.08
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 2.607282 GGTAGGATCGTATGGCAGAACG 60.607 54.545 16.46 16.46 40.40 3.95
33 34 0.875908 CGTCGTCGGGTAGGATCGTA 60.876 60.000 0.00 0.00 0.00 3.43
64 65 1.357420 TGCTTCTTTTCCTATGGCCCA 59.643 47.619 0.00 0.00 0.00 5.36
65 66 1.751351 GTGCTTCTTTTCCTATGGCCC 59.249 52.381 0.00 0.00 0.00 5.80
66 67 2.685388 GAGTGCTTCTTTTCCTATGGCC 59.315 50.000 0.00 0.00 0.00 5.36
88 89 2.687935 AGTGACCCAACAAACACATCAC 59.312 45.455 0.00 0.00 35.97 3.06
141 142 0.522626 CATGCGTTGCAATGAGGACA 59.477 50.000 22.81 10.69 43.62 4.02
156 157 5.239525 CCCTTAACTAGCTAATTGTCCATGC 59.760 44.000 0.00 0.00 0.00 4.06
185 186 0.763035 AGTTACGGTTGCTGACCCTT 59.237 50.000 4.55 0.00 46.35 3.95
193 194 3.438781 TCCATTCATCAAGTTACGGTTGC 59.561 43.478 0.00 0.00 0.00 4.17
197 198 8.721478 CCTATTATTCCATTCATCAAGTTACGG 58.279 37.037 0.00 0.00 0.00 4.02
219 220 9.807921 TTCTTTCTGTCCTTAATTTTGACCTAT 57.192 29.630 0.00 0.00 0.00 2.57
237 238 5.470845 AAGAACGTGTGTCTTTCTTTCTG 57.529 39.130 0.00 0.00 40.22 3.02
280 285 2.696775 TGGTACATATCGGGGTCCAAT 58.303 47.619 0.00 0.00 0.00 3.16
290 295 7.173907 CCTGGAATCTGACATTTGGTACATATC 59.826 40.741 0.00 0.00 39.30 1.63
297 303 2.885554 GCCCTGGAATCTGACATTTGGT 60.886 50.000 0.00 0.00 0.00 3.67
515 521 9.221933 CCAAACTGGGTTTTACTTTTTACTTTT 57.778 29.630 0.00 0.00 33.10 2.27
516 522 7.334921 GCCAAACTGGGTTTTACTTTTTACTTT 59.665 33.333 0.00 0.00 38.19 2.66
517 523 6.819649 GCCAAACTGGGTTTTACTTTTTACTT 59.180 34.615 0.00 0.00 38.19 2.24
518 524 6.342906 GCCAAACTGGGTTTTACTTTTTACT 58.657 36.000 0.00 0.00 38.19 2.24
519 525 5.524646 GGCCAAACTGGGTTTTACTTTTTAC 59.475 40.000 0.00 0.00 38.19 2.01
520 526 5.189145 TGGCCAAACTGGGTTTTACTTTTTA 59.811 36.000 0.61 0.00 38.19 1.52
521 527 4.019231 TGGCCAAACTGGGTTTTACTTTTT 60.019 37.500 0.61 0.00 38.19 1.94
522 528 3.519913 TGGCCAAACTGGGTTTTACTTTT 59.480 39.130 0.61 0.00 38.19 2.27
531 971 0.325203 ACAAACTGGCCAAACTGGGT 60.325 50.000 7.01 0.00 38.19 4.51
536 976 4.760204 AGTCATAGTACAAACTGGCCAAAC 59.240 41.667 7.01 0.00 36.36 2.93
566 1006 8.630054 TTTATTAGTCACAGGCAAAACTATGT 57.370 30.769 0.00 0.00 0.00 2.29
587 1027 6.830324 TCATCTTGACATTTGCTAGGCTTTAT 59.170 34.615 0.00 0.00 0.00 1.40
600 1040 7.055667 AGTCACCGTATATCATCTTGACATT 57.944 36.000 0.00 0.00 35.41 2.71
601 1041 6.656632 AGTCACCGTATATCATCTTGACAT 57.343 37.500 0.00 0.00 35.41 3.06
604 1044 5.298527 ACGAAGTCACCGTATATCATCTTGA 59.701 40.000 0.00 0.00 29.74 3.02
606 1046 5.769484 ACGAAGTCACCGTATATCATCTT 57.231 39.130 0.00 0.00 29.74 2.40
607 1047 6.872628 TTACGAAGTCACCGTATATCATCT 57.127 37.500 0.00 0.00 43.93 2.90
608 1048 8.021973 AGATTTACGAAGTCACCGTATATCATC 58.978 37.037 19.76 10.27 45.02 2.92
609 1049 7.883217 AGATTTACGAAGTCACCGTATATCAT 58.117 34.615 19.76 8.95 45.02 2.45
610 1050 7.012610 TGAGATTTACGAAGTCACCGTATATCA 59.987 37.037 19.76 9.06 45.02 2.15
611 1051 7.358066 TGAGATTTACGAAGTCACCGTATATC 58.642 38.462 13.95 13.95 44.03 1.63
612 1052 7.268199 TGAGATTTACGAAGTCACCGTATAT 57.732 36.000 0.00 0.00 43.93 0.86
613 1053 6.682423 TGAGATTTACGAAGTCACCGTATA 57.318 37.500 0.00 0.00 43.93 1.47
614 1054 5.571784 TGAGATTTACGAAGTCACCGTAT 57.428 39.130 0.00 0.00 43.93 3.06
615 1055 5.181811 TCTTGAGATTTACGAAGTCACCGTA 59.818 40.000 0.00 0.00 43.93 4.02
616 1056 3.928727 TGAGATTTACGAAGTCACCGT 57.071 42.857 0.00 0.00 43.93 4.83
617 1057 4.482386 TCTTGAGATTTACGAAGTCACCG 58.518 43.478 0.00 0.00 43.93 4.94
618 1058 6.100004 TCATCTTGAGATTTACGAAGTCACC 58.900 40.000 0.00 0.00 35.39 4.02
619 1059 7.763172 ATCATCTTGAGATTTACGAAGTCAC 57.237 36.000 0.00 0.00 35.39 3.67
622 1062 9.915629 GGTATATCATCTTGAGATTTACGAAGT 57.084 33.333 0.00 0.00 35.43 3.01
623 1063 9.066939 CGGTATATCATCTTGAGATTTACGAAG 57.933 37.037 0.00 0.00 33.48 3.79
624 1064 8.789762 TCGGTATATCATCTTGAGATTTACGAA 58.210 33.333 0.00 0.00 33.48 3.85
625 1065 8.235226 GTCGGTATATCATCTTGAGATTTACGA 58.765 37.037 0.00 0.00 33.48 3.43
627 1067 9.562583 GAGTCGGTATATCATCTTGAGATTTAC 57.437 37.037 0.00 0.00 30.15 2.01
628 1068 9.297037 TGAGTCGGTATATCATCTTGAGATTTA 57.703 33.333 0.00 0.00 30.15 1.40
629 1069 8.183104 TGAGTCGGTATATCATCTTGAGATTT 57.817 34.615 0.00 0.00 30.15 2.17
630 1070 7.450014 ACTGAGTCGGTATATCATCTTGAGATT 59.550 37.037 1.69 0.00 30.15 2.40
631 1071 6.945435 ACTGAGTCGGTATATCATCTTGAGAT 59.055 38.462 1.69 0.00 32.49 2.75
632 1072 6.299922 ACTGAGTCGGTATATCATCTTGAGA 58.700 40.000 1.69 0.00 0.00 3.27
633 1073 6.429692 AGACTGAGTCGGTATATCATCTTGAG 59.570 42.308 4.10 0.00 37.67 3.02
634 1074 6.299922 AGACTGAGTCGGTATATCATCTTGA 58.700 40.000 4.10 0.00 37.67 3.02
635 1075 6.567687 AGACTGAGTCGGTATATCATCTTG 57.432 41.667 4.10 0.00 37.67 3.02
637 1077 7.429633 CAAAAGACTGAGTCGGTATATCATCT 58.570 38.462 4.10 0.00 37.67 2.90
639 1079 6.463049 CCCAAAAGACTGAGTCGGTATATCAT 60.463 42.308 4.10 0.00 37.67 2.45
640 1080 5.163447 CCCAAAAGACTGAGTCGGTATATCA 60.163 44.000 4.10 0.00 37.67 2.15
642 1082 4.101119 CCCCAAAAGACTGAGTCGGTATAT 59.899 45.833 4.10 0.00 37.67 0.86
643 1083 3.449737 CCCCAAAAGACTGAGTCGGTATA 59.550 47.826 4.10 0.00 37.67 1.47
644 1084 2.236395 CCCCAAAAGACTGAGTCGGTAT 59.764 50.000 4.10 0.00 37.67 2.73
645 1085 1.621814 CCCCAAAAGACTGAGTCGGTA 59.378 52.381 4.10 0.00 37.67 4.02
646 1086 0.396811 CCCCAAAAGACTGAGTCGGT 59.603 55.000 3.66 3.66 37.67 4.69
647 1087 0.685097 TCCCCAAAAGACTGAGTCGG 59.315 55.000 6.99 2.10 37.67 4.79
648 1088 2.289694 ACATCCCCAAAAGACTGAGTCG 60.290 50.000 6.99 0.00 37.67 4.18
649 1089 3.425162 ACATCCCCAAAAGACTGAGTC 57.575 47.619 3.98 3.98 0.00 3.36
650 1090 3.138283 TGAACATCCCCAAAAGACTGAGT 59.862 43.478 0.00 0.00 0.00 3.41
651 1091 3.754965 TGAACATCCCCAAAAGACTGAG 58.245 45.455 0.00 0.00 0.00 3.35
654 1094 4.540099 TCCTATGAACATCCCCAAAAGACT 59.460 41.667 0.00 0.00 0.00 3.24
655 1095 4.855340 TCCTATGAACATCCCCAAAAGAC 58.145 43.478 0.00 0.00 0.00 3.01
656 1096 4.540099 ACTCCTATGAACATCCCCAAAAGA 59.460 41.667 0.00 0.00 0.00 2.52
658 1098 4.946160 ACTCCTATGAACATCCCCAAAA 57.054 40.909 0.00 0.00 0.00 2.44
659 1099 4.412199 CCTACTCCTATGAACATCCCCAAA 59.588 45.833 0.00 0.00 0.00 3.28
661 1101 3.587498 CCTACTCCTATGAACATCCCCA 58.413 50.000 0.00 0.00 0.00 4.96
662 1102 2.907042 CCCTACTCCTATGAACATCCCC 59.093 54.545 0.00 0.00 0.00 4.81
663 1103 3.325135 CACCCTACTCCTATGAACATCCC 59.675 52.174 0.00 0.00 0.00 3.85
664 1104 3.967987 ACACCCTACTCCTATGAACATCC 59.032 47.826 0.00 0.00 0.00 3.51
666 1106 4.162320 CACACACCCTACTCCTATGAACAT 59.838 45.833 0.00 0.00 0.00 2.71
667 1107 3.513912 CACACACCCTACTCCTATGAACA 59.486 47.826 0.00 0.00 0.00 3.18
669 1109 3.513912 CACACACACCCTACTCCTATGAA 59.486 47.826 0.00 0.00 0.00 2.57
670 1110 3.096852 CACACACACCCTACTCCTATGA 58.903 50.000 0.00 0.00 0.00 2.15
673 1113 1.263356 GCACACACACCCTACTCCTA 58.737 55.000 0.00 0.00 0.00 2.94
674 1114 1.816863 CGCACACACACCCTACTCCT 61.817 60.000 0.00 0.00 0.00 3.69
676 1116 2.027625 GCGCACACACACCCTACTC 61.028 63.158 0.30 0.00 0.00 2.59
677 1117 2.030562 GCGCACACACACCCTACT 59.969 61.111 0.30 0.00 0.00 2.57
678 1118 3.411351 CGCGCACACACACCCTAC 61.411 66.667 8.75 0.00 0.00 3.18
682 1122 4.000557 CAGACGCGCACACACACC 62.001 66.667 5.73 0.00 0.00 4.16
683 1123 1.947146 TACAGACGCGCACACACAC 60.947 57.895 5.73 0.00 0.00 3.82
684 1124 1.947146 GTACAGACGCGCACACACA 60.947 57.895 5.73 0.00 0.00 3.72
685 1125 1.660575 AGTACAGACGCGCACACAC 60.661 57.895 5.73 0.00 0.00 3.82
686 1126 1.660264 CAGTACAGACGCGCACACA 60.660 57.895 5.73 0.00 0.00 3.72
687 1127 1.660575 ACAGTACAGACGCGCACAC 60.661 57.895 5.73 0.00 0.00 3.82
688 1128 1.660264 CACAGTACAGACGCGCACA 60.660 57.895 5.73 0.00 0.00 4.57
689 1129 3.000080 GCACAGTACAGACGCGCAC 62.000 63.158 5.73 0.00 0.00 5.34
691 1131 0.731514 TTAGCACAGTACAGACGCGC 60.732 55.000 5.73 0.00 0.00 6.86
693 1133 4.663636 ATTTTTAGCACAGTACAGACGC 57.336 40.909 0.00 0.00 0.00 5.19
705 1145 9.834628 GCGGCAATTATACTATTATTTTTAGCA 57.165 29.630 0.00 0.00 0.00 3.49
708 1148 9.834628 GCAGCGGCAATTATACTATTATTTTTA 57.165 29.630 3.18 0.00 40.72 1.52
709 1149 7.812669 GGCAGCGGCAATTATACTATTATTTTT 59.187 33.333 11.88 0.00 43.71 1.94
710 1150 7.040062 TGGCAGCGGCAATTATACTATTATTTT 60.040 33.333 11.88 0.00 43.71 1.82
712 1152 5.943416 TGGCAGCGGCAATTATACTATTATT 59.057 36.000 11.88 0.00 43.71 1.40
713 1153 5.496556 TGGCAGCGGCAATTATACTATTAT 58.503 37.500 11.88 0.00 43.71 1.28
714 1154 4.900684 TGGCAGCGGCAATTATACTATTA 58.099 39.130 11.88 0.00 43.71 0.98
715 1155 3.750371 TGGCAGCGGCAATTATACTATT 58.250 40.909 11.88 0.00 43.71 1.73
716 1156 3.417069 TGGCAGCGGCAATTATACTAT 57.583 42.857 11.88 0.00 43.71 2.12
717 1157 2.920724 TGGCAGCGGCAATTATACTA 57.079 45.000 11.88 0.00 43.71 1.82
789 2318 1.925285 TTGGATGCAGGCTGTAGGGG 61.925 60.000 17.16 0.00 0.00 4.79
888 2417 6.197842 CGTCGAGGCGTACTTTATTTTTATCT 59.802 38.462 0.00 0.00 0.00 1.98
892 2421 3.181527 GCGTCGAGGCGTACTTTATTTTT 60.182 43.478 15.04 0.00 0.00 1.94
949 2478 1.584380 GCAGAGCAGAGCAAAGGGTG 61.584 60.000 0.00 0.00 0.00 4.61
951 2480 0.608582 AAGCAGAGCAGAGCAAAGGG 60.609 55.000 0.00 0.00 0.00 3.95
956 2499 1.671379 CAGCAAGCAGAGCAGAGCA 60.671 57.895 0.00 0.00 0.00 4.26
957 2500 2.400158 CCAGCAAGCAGAGCAGAGC 61.400 63.158 0.00 0.00 0.00 4.09
1010 2554 0.820074 CGAGGAGGCCGAGATGTAGT 60.820 60.000 0.00 0.00 0.00 2.73
1011 2555 0.820074 ACGAGGAGGCCGAGATGTAG 60.820 60.000 0.00 0.00 0.00 2.74
1012 2556 0.818445 GACGAGGAGGCCGAGATGTA 60.818 60.000 0.00 0.00 0.00 2.29
1098 2642 0.737715 CTCGGAGAAAAGCTCGGGTG 60.738 60.000 0.00 0.00 44.91 4.61
1138 2682 4.520846 GCACGGCGCCAGAAATCG 62.521 66.667 28.98 13.10 32.94 3.34
1156 2720 3.203710 TCTCCTCCCCAAGAACTATCGTA 59.796 47.826 0.00 0.00 0.00 3.43
1170 2734 0.958822 GATTCGAGCTCTCTCCTCCC 59.041 60.000 12.85 0.00 35.94 4.30
1202 2907 4.430765 ACGCGTCACCCATCGGAC 62.431 66.667 5.58 0.00 0.00 4.79
1212 2917 1.081972 TTGAATCGTCGACGCGTCA 60.082 52.632 35.71 29.86 39.60 4.35
1221 2926 2.396157 GGGTGGCCGTTGAATCGTC 61.396 63.158 0.00 0.00 0.00 4.20
1272 2982 2.159599 GCATCAGAAAAAGAGTCAGGCG 60.160 50.000 0.00 0.00 0.00 5.52
1281 2991 3.973657 ACTTGCAGTGCATCAGAAAAAG 58.026 40.909 20.50 12.95 38.76 2.27
1292 3002 2.315925 TATGCTCCTACTTGCAGTGC 57.684 50.000 8.58 8.58 42.74 4.40
1383 3169 5.220796 GGCTTTGTTTGTACTTTTCGAGTCT 60.221 40.000 0.00 0.00 39.86 3.24
1434 3220 2.289444 TGCAGAGTAAAAAGGACCGGAG 60.289 50.000 9.46 0.00 0.00 4.63
1435 3221 1.695242 TGCAGAGTAAAAAGGACCGGA 59.305 47.619 9.46 0.00 0.00 5.14
1436 3222 2.178912 TGCAGAGTAAAAAGGACCGG 57.821 50.000 0.00 0.00 0.00 5.28
1437 3223 6.202954 CCTAATATGCAGAGTAAAAAGGACCG 59.797 42.308 0.00 0.00 0.00 4.79
1438 3224 7.054751 ACCTAATATGCAGAGTAAAAAGGACC 58.945 38.462 2.56 0.00 0.00 4.46
1439 3225 8.507524 AACCTAATATGCAGAGTAAAAAGGAC 57.492 34.615 2.56 0.00 0.00 3.85
1440 3226 8.956426 CAAACCTAATATGCAGAGTAAAAAGGA 58.044 33.333 2.56 0.00 0.00 3.36
1441 3227 8.739972 ACAAACCTAATATGCAGAGTAAAAAGG 58.260 33.333 0.00 0.00 0.00 3.11
1442 3228 9.774742 GACAAACCTAATATGCAGAGTAAAAAG 57.225 33.333 0.00 0.00 0.00 2.27
1443 3229 9.515226 AGACAAACCTAATATGCAGAGTAAAAA 57.485 29.630 0.00 0.00 0.00 1.94
1444 3230 8.946085 CAGACAAACCTAATATGCAGAGTAAAA 58.054 33.333 0.00 0.00 0.00 1.52
1445 3231 8.318412 TCAGACAAACCTAATATGCAGAGTAAA 58.682 33.333 0.00 0.00 0.00 2.01
1446 3232 7.847096 TCAGACAAACCTAATATGCAGAGTAA 58.153 34.615 0.00 0.00 0.00 2.24
1447 3233 7.418337 TCAGACAAACCTAATATGCAGAGTA 57.582 36.000 0.00 0.00 0.00 2.59
1448 3234 6.299805 TCAGACAAACCTAATATGCAGAGT 57.700 37.500 0.00 0.00 0.00 3.24
1449 3235 6.820656 ACTTCAGACAAACCTAATATGCAGAG 59.179 38.462 0.00 0.00 0.00 3.35
1450 3236 6.711277 ACTTCAGACAAACCTAATATGCAGA 58.289 36.000 0.00 0.00 0.00 4.26
1451 3237 6.595326 TGACTTCAGACAAACCTAATATGCAG 59.405 38.462 0.00 0.00 0.00 4.41
1452 3238 6.472016 TGACTTCAGACAAACCTAATATGCA 58.528 36.000 0.00 0.00 0.00 3.96
1453 3239 6.985188 TGACTTCAGACAAACCTAATATGC 57.015 37.500 0.00 0.00 0.00 3.14
1454 3240 9.388506 AGATTGACTTCAGACAAACCTAATATG 57.611 33.333 0.00 0.00 33.89 1.78
1455 3241 9.606631 GAGATTGACTTCAGACAAACCTAATAT 57.393 33.333 0.00 0.00 33.89 1.28
1456 3242 8.593679 TGAGATTGACTTCAGACAAACCTAATA 58.406 33.333 0.00 0.00 33.89 0.98
1457 3243 7.453393 TGAGATTGACTTCAGACAAACCTAAT 58.547 34.615 0.00 0.00 33.89 1.73
1458 3244 6.826668 TGAGATTGACTTCAGACAAACCTAA 58.173 36.000 0.00 0.00 33.89 2.69
1459 3245 6.419484 TGAGATTGACTTCAGACAAACCTA 57.581 37.500 0.00 0.00 33.89 3.08
1460 3246 5.296151 TGAGATTGACTTCAGACAAACCT 57.704 39.130 0.00 0.00 33.89 3.50
1461 3247 5.123027 GGATGAGATTGACTTCAGACAAACC 59.877 44.000 0.00 0.00 33.89 3.27
1462 3248 5.702670 TGGATGAGATTGACTTCAGACAAAC 59.297 40.000 0.00 0.00 33.89 2.93
1463 3249 5.868454 TGGATGAGATTGACTTCAGACAAA 58.132 37.500 0.00 0.00 33.89 2.83
1464 3250 5.488262 TGGATGAGATTGACTTCAGACAA 57.512 39.130 0.00 0.00 34.59 3.18
1465 3251 5.012458 AGTTGGATGAGATTGACTTCAGACA 59.988 40.000 0.00 0.00 0.00 3.41
1466 3252 5.486526 AGTTGGATGAGATTGACTTCAGAC 58.513 41.667 0.00 0.00 0.00 3.51
1467 3253 5.752036 AGTTGGATGAGATTGACTTCAGA 57.248 39.130 0.00 0.00 0.00 3.27
1468 3254 6.429078 TCAAAGTTGGATGAGATTGACTTCAG 59.571 38.462 0.00 0.00 0.00 3.02
1469 3255 6.205464 GTCAAAGTTGGATGAGATTGACTTCA 59.795 38.462 8.70 0.00 41.92 3.02
1470 3256 6.348868 GGTCAAAGTTGGATGAGATTGACTTC 60.349 42.308 13.97 0.00 43.66 3.01
1471 3257 5.474876 GGTCAAAGTTGGATGAGATTGACTT 59.525 40.000 13.97 0.00 43.66 3.01
1472 3258 5.006386 GGTCAAAGTTGGATGAGATTGACT 58.994 41.667 13.97 0.00 43.66 3.41
1473 3259 4.761739 TGGTCAAAGTTGGATGAGATTGAC 59.238 41.667 7.68 7.68 43.51 3.18
1474 3260 4.984295 TGGTCAAAGTTGGATGAGATTGA 58.016 39.130 0.00 0.00 0.00 2.57
1475 3261 5.706916 CTTGGTCAAAGTTGGATGAGATTG 58.293 41.667 0.00 0.00 0.00 2.67
1476 3262 5.972107 CTTGGTCAAAGTTGGATGAGATT 57.028 39.130 0.00 0.00 0.00 2.40
1511 3297 9.679661 TGGTGTTGTTATGTGAATGTCTATAAT 57.320 29.630 0.00 0.00 0.00 1.28
1512 3298 9.508642 TTGGTGTTGTTATGTGAATGTCTATAA 57.491 29.630 0.00 0.00 0.00 0.98
1513 3299 9.679661 ATTGGTGTTGTTATGTGAATGTCTATA 57.320 29.630 0.00 0.00 0.00 1.31
1514 3300 7.994425 TTGGTGTTGTTATGTGAATGTCTAT 57.006 32.000 0.00 0.00 0.00 1.98
1515 3301 7.994425 ATTGGTGTTGTTATGTGAATGTCTA 57.006 32.000 0.00 0.00 0.00 2.59
1516 3302 6.899393 ATTGGTGTTGTTATGTGAATGTCT 57.101 33.333 0.00 0.00 0.00 3.41
1517 3303 8.458052 TGATATTGGTGTTGTTATGTGAATGTC 58.542 33.333 0.00 0.00 0.00 3.06
1518 3304 8.347004 TGATATTGGTGTTGTTATGTGAATGT 57.653 30.769 0.00 0.00 0.00 2.71
1519 3305 9.806203 AATGATATTGGTGTTGTTATGTGAATG 57.194 29.630 0.00 0.00 0.00 2.67
1522 3308 9.898152 TCTAATGATATTGGTGTTGTTATGTGA 57.102 29.630 0.00 0.00 0.00 3.58
1633 3419 6.190408 TGGATTTGCCGAAAGTCAAACTTTG 61.190 40.000 9.65 0.00 42.50 2.77
1634 3420 4.142049 TGGATTTGCCGAAAGTCAAACTTT 60.142 37.500 4.82 4.82 41.99 2.66
1635 3421 3.383185 TGGATTTGCCGAAAGTCAAACTT 59.617 39.130 0.00 0.00 38.90 2.66
1636 3422 2.955660 TGGATTTGCCGAAAGTCAAACT 59.044 40.909 0.00 0.00 40.66 2.66
1637 3423 3.363341 TGGATTTGCCGAAAGTCAAAC 57.637 42.857 0.00 0.00 40.66 2.93
1638 3424 4.202202 ACATTGGATTTGCCGAAAGTCAAA 60.202 37.500 0.00 0.00 40.66 2.69
1639 3425 3.320541 ACATTGGATTTGCCGAAAGTCAA 59.679 39.130 0.00 0.00 40.66 3.18
1640 3426 2.890311 ACATTGGATTTGCCGAAAGTCA 59.110 40.909 0.00 0.00 40.66 3.41
1641 3427 3.244976 CACATTGGATTTGCCGAAAGTC 58.755 45.455 0.00 0.00 40.66 3.01
1642 3428 2.610232 GCACATTGGATTTGCCGAAAGT 60.610 45.455 0.00 0.00 40.66 2.66
1643 3429 1.994779 GCACATTGGATTTGCCGAAAG 59.005 47.619 0.00 0.00 40.66 2.62
1644 3430 1.342496 TGCACATTGGATTTGCCGAAA 59.658 42.857 0.00 0.00 40.66 3.46
1645 3431 0.964700 TGCACATTGGATTTGCCGAA 59.035 45.000 0.00 0.00 40.66 4.30
1646 3432 0.527113 CTGCACATTGGATTTGCCGA 59.473 50.000 0.00 0.00 40.66 5.54
1647 3433 0.527113 TCTGCACATTGGATTTGCCG 59.473 50.000 0.00 0.00 40.66 5.69
1648 3434 1.547372 ACTCTGCACATTGGATTTGCC 59.453 47.619 0.00 0.00 35.26 4.52
1649 3435 4.439305 TTACTCTGCACATTGGATTTGC 57.561 40.909 0.00 0.00 36.76 3.68
1650 3436 6.366877 CCTTTTTACTCTGCACATTGGATTTG 59.633 38.462 0.00 0.00 0.00 2.32
1651 3437 6.267471 TCCTTTTTACTCTGCACATTGGATTT 59.733 34.615 0.00 0.00 0.00 2.17
1652 3438 5.774690 TCCTTTTTACTCTGCACATTGGATT 59.225 36.000 0.00 0.00 0.00 3.01
1653 3439 5.183904 GTCCTTTTTACTCTGCACATTGGAT 59.816 40.000 0.00 0.00 0.00 3.41
1654 3440 4.518970 GTCCTTTTTACTCTGCACATTGGA 59.481 41.667 0.00 0.00 0.00 3.53
1655 3441 4.321230 GGTCCTTTTTACTCTGCACATTGG 60.321 45.833 0.00 0.00 0.00 3.16
1656 3442 4.613622 CGGTCCTTTTTACTCTGCACATTG 60.614 45.833 0.00 0.00 0.00 2.82
1657 3443 3.502211 CGGTCCTTTTTACTCTGCACATT 59.498 43.478 0.00 0.00 0.00 2.71
1658 3444 3.074412 CGGTCCTTTTTACTCTGCACAT 58.926 45.455 0.00 0.00 0.00 3.21
1659 3445 2.489971 CGGTCCTTTTTACTCTGCACA 58.510 47.619 0.00 0.00 0.00 4.57
1660 3446 1.197036 GCGGTCCTTTTTACTCTGCAC 59.803 52.381 0.00 0.00 0.00 4.57
1661 3447 1.202710 TGCGGTCCTTTTTACTCTGCA 60.203 47.619 0.00 0.00 0.00 4.41
1662 3448 1.464997 CTGCGGTCCTTTTTACTCTGC 59.535 52.381 0.00 0.00 0.00 4.26
1663 3449 2.076863 CCTGCGGTCCTTTTTACTCTG 58.923 52.381 0.00 0.00 0.00 3.35
1664 3450 1.003233 CCCTGCGGTCCTTTTTACTCT 59.997 52.381 0.00 0.00 0.00 3.24
1665 3451 1.002773 TCCCTGCGGTCCTTTTTACTC 59.997 52.381 0.00 0.00 0.00 2.59
1666 3452 1.003233 CTCCCTGCGGTCCTTTTTACT 59.997 52.381 0.00 0.00 0.00 2.24
1667 3453 1.271217 ACTCCCTGCGGTCCTTTTTAC 60.271 52.381 0.00 0.00 0.00 2.01
1668 3454 1.061546 ACTCCCTGCGGTCCTTTTTA 58.938 50.000 0.00 0.00 0.00 1.52
1669 3455 1.061546 TACTCCCTGCGGTCCTTTTT 58.938 50.000 0.00 0.00 0.00 1.94
1670 3456 0.323957 GTACTCCCTGCGGTCCTTTT 59.676 55.000 0.00 0.00 0.00 2.27
1671 3457 0.544595 AGTACTCCCTGCGGTCCTTT 60.545 55.000 0.00 0.00 0.00 3.11
1672 3458 0.333993 TAGTACTCCCTGCGGTCCTT 59.666 55.000 0.00 0.00 0.00 3.36
1673 3459 0.106619 CTAGTACTCCCTGCGGTCCT 60.107 60.000 0.00 0.00 0.00 3.85
1674 3460 0.395448 ACTAGTACTCCCTGCGGTCC 60.395 60.000 0.00 0.00 0.00 4.46
1675 3461 2.338577 TACTAGTACTCCCTGCGGTC 57.661 55.000 0.00 0.00 0.00 4.79
1676 3462 2.814805 TTACTAGTACTCCCTGCGGT 57.185 50.000 0.91 0.00 0.00 5.68
1677 3463 3.220110 TGATTACTAGTACTCCCTGCGG 58.780 50.000 15.45 0.00 0.00 5.69
1678 3464 4.082679 GGATGATTACTAGTACTCCCTGCG 60.083 50.000 15.45 0.00 0.00 5.18
1679 3465 5.047660 CAGGATGATTACTAGTACTCCCTGC 60.048 48.000 21.67 13.65 39.69 4.85
1680 3466 5.478679 CCAGGATGATTACTAGTACTCCCTG 59.521 48.000 24.05 24.05 39.69 4.45
1681 3467 5.375956 TCCAGGATGATTACTAGTACTCCCT 59.624 44.000 15.45 12.76 39.69 4.20
1682 3468 5.477637 GTCCAGGATGATTACTAGTACTCCC 59.522 48.000 15.45 11.07 39.69 4.30
1683 3469 6.069331 TGTCCAGGATGATTACTAGTACTCC 58.931 44.000 15.45 12.57 39.69 3.85
1684 3470 7.768807 ATGTCCAGGATGATTACTAGTACTC 57.231 40.000 12.18 12.18 39.69 2.59
1685 3471 8.424918 CAAATGTCCAGGATGATTACTAGTACT 58.575 37.037 0.91 0.00 39.69 2.73
1686 3472 8.204836 ACAAATGTCCAGGATGATTACTAGTAC 58.795 37.037 0.91 0.00 39.69 2.73
1687 3473 8.319057 ACAAATGTCCAGGATGATTACTAGTA 57.681 34.615 0.00 0.00 39.69 1.82
1688 3474 7.200434 ACAAATGTCCAGGATGATTACTAGT 57.800 36.000 0.00 0.00 39.69 2.57
1689 3475 7.721286 GACAAATGTCCAGGATGATTACTAG 57.279 40.000 2.04 0.00 39.07 2.57
1704 3490 5.412594 TGCAAGAGAATACTGGACAAATGTC 59.587 40.000 4.96 4.96 44.04 3.06
1705 3491 5.316167 TGCAAGAGAATACTGGACAAATGT 58.684 37.500 0.00 0.00 0.00 2.71
1706 3492 5.885230 TGCAAGAGAATACTGGACAAATG 57.115 39.130 0.00 0.00 0.00 2.32
1707 3493 6.660521 TGATTGCAAGAGAATACTGGACAAAT 59.339 34.615 4.94 0.00 0.00 2.32
1708 3494 6.003326 TGATTGCAAGAGAATACTGGACAAA 58.997 36.000 4.94 0.00 0.00 2.83
1709 3495 5.412594 GTGATTGCAAGAGAATACTGGACAA 59.587 40.000 4.94 0.00 0.00 3.18
1710 3496 4.937620 GTGATTGCAAGAGAATACTGGACA 59.062 41.667 4.94 0.00 0.00 4.02
1711 3497 4.333926 GGTGATTGCAAGAGAATACTGGAC 59.666 45.833 4.94 0.00 0.00 4.02
1712 3498 4.225942 AGGTGATTGCAAGAGAATACTGGA 59.774 41.667 4.94 0.00 0.00 3.86
1713 3499 4.521146 AGGTGATTGCAAGAGAATACTGG 58.479 43.478 4.94 0.00 0.00 4.00
1714 3500 5.426504 AGAGGTGATTGCAAGAGAATACTG 58.573 41.667 4.94 0.00 0.00 2.74
1715 3501 5.424895 AGAGAGGTGATTGCAAGAGAATACT 59.575 40.000 4.94 0.00 0.00 2.12
1716 3502 5.669477 AGAGAGGTGATTGCAAGAGAATAC 58.331 41.667 4.94 0.00 0.00 1.89
1717 3503 5.946942 AGAGAGGTGATTGCAAGAGAATA 57.053 39.130 4.94 0.00 0.00 1.75
1718 3504 4.840716 AGAGAGGTGATTGCAAGAGAAT 57.159 40.909 4.94 0.00 0.00 2.40
1719 3505 4.630644 AAGAGAGGTGATTGCAAGAGAA 57.369 40.909 4.94 0.00 0.00 2.87
1720 3506 4.630644 AAAGAGAGGTGATTGCAAGAGA 57.369 40.909 4.94 0.00 0.00 3.10
1721 3507 5.936956 AGTAAAAGAGAGGTGATTGCAAGAG 59.063 40.000 4.94 0.00 0.00 2.85
1722 3508 5.702670 CAGTAAAAGAGAGGTGATTGCAAGA 59.297 40.000 4.94 0.00 0.00 3.02
1723 3509 5.471456 ACAGTAAAAGAGAGGTGATTGCAAG 59.529 40.000 4.94 0.00 0.00 4.01
1724 3510 5.239306 CACAGTAAAAGAGAGGTGATTGCAA 59.761 40.000 0.00 0.00 0.00 4.08
1725 3511 4.756642 CACAGTAAAAGAGAGGTGATTGCA 59.243 41.667 0.00 0.00 0.00 4.08
1726 3512 4.154918 CCACAGTAAAAGAGAGGTGATTGC 59.845 45.833 0.00 0.00 0.00 3.56
1727 3513 4.697352 CCCACAGTAAAAGAGAGGTGATTG 59.303 45.833 0.00 0.00 0.00 2.67
1748 3534 3.567478 AACTCATTGGATAGCTGTCCC 57.433 47.619 25.10 10.14 37.48 4.46
1752 3538 7.259882 TGCAAAATTAACTCATTGGATAGCTG 58.740 34.615 0.00 0.00 0.00 4.24
1757 3543 9.941325 TTTACATGCAAAATTAACTCATTGGAT 57.059 25.926 0.00 0.00 34.70 3.41
1780 3574 8.657387 TCCATTTTACAGGTCATTTCCATTTA 57.343 30.769 0.00 0.00 0.00 1.40
1814 3608 5.698741 TTGCCCTGATGAAGAGAAGATAA 57.301 39.130 0.00 0.00 0.00 1.75
1828 3623 1.704628 TCTCCAACTTGATTGCCCTGA 59.295 47.619 0.00 0.00 36.93 3.86
1909 3704 1.569479 GGAGTTGCTGCACGAAGGAC 61.569 60.000 0.00 0.00 0.00 3.85
1931 3726 4.191544 TGTAACTGTCGGCTACTACGTAT 58.808 43.478 0.00 0.00 0.00 3.06
1932 3727 3.595173 TGTAACTGTCGGCTACTACGTA 58.405 45.455 0.00 0.00 0.00 3.57
1933 3728 2.417933 CTGTAACTGTCGGCTACTACGT 59.582 50.000 0.00 0.00 0.00 3.57
1934 3729 2.790468 GCTGTAACTGTCGGCTACTACG 60.790 54.545 0.00 0.00 34.72 3.51
1935 3730 2.163010 TGCTGTAACTGTCGGCTACTAC 59.837 50.000 2.53 0.00 37.96 2.73
1936 3731 2.163010 GTGCTGTAACTGTCGGCTACTA 59.837 50.000 2.53 0.00 37.96 1.82
1937 3732 1.067776 GTGCTGTAACTGTCGGCTACT 60.068 52.381 2.53 0.00 37.96 2.57
1938 3733 1.067776 AGTGCTGTAACTGTCGGCTAC 60.068 52.381 2.53 0.41 37.96 3.58
1939 3734 1.254026 AGTGCTGTAACTGTCGGCTA 58.746 50.000 2.53 0.00 37.96 3.93
1940 3735 1.067776 GTAGTGCTGTAACTGTCGGCT 60.068 52.381 2.53 0.00 37.96 5.52
1944 3739 2.325761 CGTGGTAGTGCTGTAACTGTC 58.674 52.381 0.00 0.00 0.00 3.51
2026 3833 2.757917 AGCTCGTCTGAGGCTCCC 60.758 66.667 12.86 0.00 42.79 4.30
2032 3839 2.866872 AGACCTGAGCTCGTCTGAG 58.133 57.895 19.68 7.17 45.49 3.35
2046 3853 2.317684 GAGAAACGTTCGTCTCAGACC 58.682 52.381 20.19 0.00 40.09 3.85
2050 3857 0.309922 AGCGAGAAACGTTCGTCTCA 59.690 50.000 23.13 0.00 44.60 3.27
2055 3862 1.505057 CGCAAGCGAGAAACGTTCG 60.505 57.895 9.11 1.78 44.60 3.95
2062 3869 1.629013 CTACATCACGCAAGCGAGAA 58.371 50.000 22.30 6.07 41.68 2.87
2063 3870 0.179137 CCTACATCACGCAAGCGAGA 60.179 55.000 22.30 19.01 42.44 4.04
2070 3877 0.812549 TCTTACGCCTACATCACGCA 59.187 50.000 0.00 0.00 0.00 5.24
2075 3882 2.544069 GCAGTCCTCTTACGCCTACATC 60.544 54.545 0.00 0.00 0.00 3.06
2080 3887 2.359967 GGGCAGTCCTCTTACGCCT 61.360 63.158 0.00 0.00 38.37 5.52
2092 3899 2.446848 CCATGGATCCTCGGGCAGT 61.447 63.158 14.23 0.00 0.00 4.40
2107 3914 1.978617 CCTGAAACGCCTTGCCCAT 60.979 57.895 0.00 0.00 0.00 4.00
2152 3959 2.027073 CACCACATCACCACGACGG 61.027 63.158 0.00 0.00 42.50 4.79
2171 3978 2.434185 GTCATCGGCCGAAGCACA 60.434 61.111 34.66 9.33 42.56 4.57
2188 3995 2.603892 CGTATCAGTACCCGATTCACCG 60.604 54.545 1.05 0.00 0.00 4.94
2203 4010 5.337554 CGATAAGTCTTGTGAACCGTATCA 58.662 41.667 0.00 0.00 0.00 2.15
2215 4022 6.749139 TCTTCCATATGTCCGATAAGTCTTG 58.251 40.000 1.24 0.00 0.00 3.02
2231 4038 4.591321 AAATGCCCACTTCTCTTCCATA 57.409 40.909 0.00 0.00 0.00 2.74
2247 4054 2.738314 AGATTTTCGCCAGCAAAAATGC 59.262 40.909 6.03 0.00 35.72 3.56
2253 4060 2.545532 CCAACAAGATTTTCGCCAGCAA 60.546 45.455 0.00 0.00 0.00 3.91
2275 4082 5.500645 AAGTGTAACAACCTGAGCTTTTC 57.499 39.130 0.00 0.00 41.43 2.29
2319 4126 9.442047 AGTGAAGAAAACATATACAGAAGGAAG 57.558 33.333 0.00 0.00 0.00 3.46
2325 4132 9.554395 TGTCAAAGTGAAGAAAACATATACAGA 57.446 29.630 0.00 0.00 0.00 3.41
2327 4134 9.114952 TGTGTCAAAGTGAAGAAAACATATACA 57.885 29.630 0.00 0.00 0.00 2.29
2332 4139 6.924111 ACTTGTGTCAAAGTGAAGAAAACAT 58.076 32.000 0.00 0.00 38.95 2.71
2339 4146 5.551760 AGTGAACTTGTGTCAAAGTGAAG 57.448 39.130 0.00 0.00 40.28 3.02
2344 4151 6.128282 ACAACAGTAGTGAACTTGTGTCAAAG 60.128 38.462 4.09 0.00 35.76 2.77
2379 4186 7.265647 TCATACTATCAGACTAACAGTGAGC 57.734 40.000 0.00 0.00 0.00 4.26
2398 4205 9.871238 TTGACACTTTCTAGGAGTAATTCATAC 57.129 33.333 0.00 0.00 34.52 2.39
2470 4361 8.984855 ACATCATTCCTTGGATCACAATTATTT 58.015 29.630 0.00 0.00 38.65 1.40
2517 4408 5.449297 TCCACAAATCATGAGGAATACCA 57.551 39.130 0.09 0.00 44.59 3.25
2579 4470 6.939163 CCAGATAGGCAATTCAGTTATAGCTT 59.061 38.462 0.00 0.00 0.00 3.74
2580 4471 6.043706 ACCAGATAGGCAATTCAGTTATAGCT 59.956 38.462 0.00 0.00 43.14 3.32
2708 4599 5.617751 GCAACGAAATGCTTGTCAGACTAAT 60.618 40.000 1.31 0.00 43.06 1.73
2709 4600 4.319477 GCAACGAAATGCTTGTCAGACTAA 60.319 41.667 1.31 0.00 43.06 2.24
2771 4662 1.980765 TGAGCAATGGAGTGAACCTCT 59.019 47.619 0.00 0.00 40.30 3.69
2780 4671 0.609957 TGGTTGGCTGAGCAATGGAG 60.610 55.000 6.82 0.00 0.00 3.86
2797 4688 4.221262 TCCTCCTTTTCTTGCATGATTTGG 59.779 41.667 2.75 6.13 0.00 3.28
2928 4819 9.213799 CTTCAGCAAGAATTTCTAGAACTAGTT 57.786 33.333 8.13 8.13 35.25 2.24
3017 4908 1.373497 CACGCCGAAAGAGCAGACT 60.373 57.895 0.00 0.00 0.00 3.24
3118 5016 1.395954 CACAAGGCATCACATCACTCG 59.604 52.381 0.00 0.00 0.00 4.18
3119 5017 2.430465 ACACAAGGCATCACATCACTC 58.570 47.619 0.00 0.00 0.00 3.51
3120 5018 2.555325 CAACACAAGGCATCACATCACT 59.445 45.455 0.00 0.00 0.00 3.41
3146 5044 4.092675 GCAGACAGTAGATGCTGAAGAAAC 59.907 45.833 4.87 0.00 39.62 2.78
3197 5122 5.007039 GTGGCATCAACAGTCATGTAGTATG 59.993 44.000 0.00 0.00 39.29 2.39
3272 5197 3.995705 CTGCAGAAGAAGAAACAGAGAGG 59.004 47.826 8.42 0.00 0.00 3.69
3378 5303 8.316497 ACCTCGATATATGGATTGAATGAGAT 57.684 34.615 0.00 0.00 0.00 2.75
3423 5348 0.173481 TTCATGAGCTCGGTCTTCGG 59.827 55.000 9.64 0.00 39.77 4.30
3572 5512 6.773638 TGTTGTATTTGGGCCAAATATTTGT 58.226 32.000 39.75 24.69 44.54 2.83
3580 5520 5.359194 TTTCTTTGTTGTATTTGGGCCAA 57.641 34.783 16.66 16.66 0.00 4.52
3666 5606 7.929941 TGTAGTATGCATGTACAAAATTCCA 57.070 32.000 17.09 0.00 0.00 3.53
3743 5684 9.567848 TTATTCATTTTCTTCCAGCGAAAATAC 57.432 29.630 9.56 0.00 44.72 1.89
3751 5692 6.861144 AGCTCTTTATTCATTTTCTTCCAGC 58.139 36.000 0.00 0.00 0.00 4.85
3851 5792 1.821216 TTTGTTGCGGAGAAGATCCC 58.179 50.000 0.00 0.00 46.50 3.85
3852 5793 3.009723 TGATTTGTTGCGGAGAAGATCC 58.990 45.455 0.00 0.00 45.64 3.36
3862 5803 1.536766 TCTGCCTTCTGATTTGTTGCG 59.463 47.619 0.00 0.00 0.00 4.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.